LOCUS       DAPIYB010000001        49202 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.001, whole genome shotgun sequence.
ACCESSION   DAPIYB010000001 DAPIYB010000000
VERSION     DAPIYB010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 49202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 49202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..49202
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.001"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            64..735
                     /locus_tag="RJ318_000001"
     CDS             64..735
                     /locus_tag="RJ318_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV7429917.1"
                     /translation="MINVLMIEDDPDFAQLLSEYLAQFNIKITNFENPKSALNVGIQG
                     YDCLILDLTLPGIDGLEVCREIRQKSNIPIIISSARGDLSDKVVGLQIGADDYLPKPY
                     DPKEMYARIMSLIRRTKRVEHTNNENINSAFKIDKRRHEITYEDKVLTLTPAEFEILE
                     YLIQQHGYSVSREQLVSRCKNLKDKDSKSLDVIIGRLRVKIGDSSKSPKHIFSVRGIG
                     YKLIG"
     gene            732..1967
                     /locus_tag="RJ318_000002"
     CDS             732..1967
                     /locus_tag="RJ318_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDV7429918.1"
                     /translation="MTKNYSIHTKLIILFVVTFFLVCVLFIVLLKIEGNTYNEEESLK
                     QENLIKNLLISYENTSGVEIGAYLGNSGFNAVQNPNLVKAIRNNGQSLFKAGGELCTL
                     SSLKYHSNLYFDVQCKDFDGLYEENTSDRVYNLLLIGFFSFSLLVVFMYFSVLKSLEP
                     LKKLRRQVAEVANWEQPDFLDYQEDEVGKIAFEFQKAFKKNQELIQSRQLFLRTIMHE
                     LKTPIGKGRIISEMIKEDRQKERLIAIFLRMDSLINEFAKIENLFSKNYNLHFKPSRF
                     STILEEAKEHLMIDDFNKVVKVDIRYDALINVDMEIFSVILKNLIDNALKYSNNGTCE
                     LFCCKECFTIKNPGKPLAEPIEHYLEAFTREKHNQVKGMGLGLYIVSEVCKLHNFDLI
                     YFYDDGKHCFKIFFGDKEK"
     gene            1967..2539
                     /gene="recR"
                     /locus_tag="RJ318_000003"
     CDS             1967..2539
                     /gene="recR"
                     /locus_tag="RJ318_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDV7429919.1"
                     /translation="MVKGLEKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKL
                     AHNIENAIRFIKPCEQCGALSENELCEICSDEERNKNILCIVESPKDILTLEESQSYN
                     GLYFVLDELNEEKLEKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKGLNLTFS
                     KIAQGIPSGVNLENVDLISLNKAMNFRTKI"
     gene            complement(2536..3072)
                     /locus_tag="RJ318_000004"
     CDS             complement(2536..3072)
                     /locus_tag="RJ318_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HDV7429920.1"
                     /translation="MKFLVLGIGNIMFADEGLGVHLCKQLEKNYKFTHSEFTLDFVDG
                     GTLALQLSYIIARYDRLIVLDCIEAQGASIGDVFFFPYDAMPNKISWSGSAHEIEMLQ
                     TLQYMELAGDLPKTHILACVPKRIEAMSFKLSDELIQGAKIMEKTLLDFLSKEGFAYE
                     KIADFSLQELADISYKNY"
     gene            complement(3069..3761)
                     /gene="cybH"
                     /locus_tag="RJ318_000005"
     CDS             complement(3069..3761)
                     /gene="cybH"
                     /locus_tag="RJ318_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HDV7429921.1"
                     /translation="MQNKEEKLQRKAEYEFSIGLRLTHWVRAIAIVILIGTGYYLSYV
                     FQSPISNGEPVNFMQAKYRLVHQAVGFVLIACIIFKVYLFFCDKVSAKERRSVWDIFN
                     IKLWIEQVKFYIFLGKHPHLKGVYNPLQFVTYFFFYLVILGIILTGLILYTHTYHEGL
                     GGLLYHILRPLEAAMGGLADVRTYHRILMWVIMIFVPVHIYMAIFNAVKGKDGAMDAI
                     ISGYKFVKEEQH"
     gene            complement(3772..5487)
                     /locus_tag="RJ318_000006"
     CDS             complement(3772..5487)
                     /locus_tag="RJ318_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HDV7429922.1"
                     /translation="MSQKIIVDPITRIEGHLRVEVVVDDNNVVKEAYAGSTLWRGIET
                     IVKGRDPRDAGFMTQRICGVCTFSHYKAGIVAVENALGITPPLNALLTRTLMNAALFL
                     HDHIVHFYQLHGLDWADVVSALSADVKKASDEAFKYTSNPYATGADKLLEVQQRLKTF
                     VDKGNLGPFANAYYGHPTYRLSPEQNLIVLSHYLECLRIQRIIAQCMAIFGAKNPHPQ
                     SLTVGGVTCVMDLLDPARMGEYMVKFQEVQDFVNRAYYPDLVMAGKAYAHEASVLNDI
                     GVNNLYTFKEFQIGRDEWLFESGIIKNGDLSKVYEVEEDKITEEATHSWYADNEPLHP
                     YDGKTNPNYTGLVDGESVDHHGNNVHSKVFDTKGKYSWIKAPRYEGNPMQVGPLANVV
                     VNYAKGNQNVVPVVDEFLKETGLPLNAVFSTLGRTAARCIEAKIVANNALKAFNNLVE
                     NLKVDQSTCAPYVIDNSKEYKGRYMGHVPRGTLSHWCRIKNGVIENWQAVVPSTWNAS
                     PKDANGVGGSYEQCLIGLKIADVKQPLEIIRKIHSYDPCIACAVHVMDTKGNNLSEYK
                     VNVNL"
     gene            complement(5490..6629)
                     /locus_tag="RJ318_000007"
     CDS             complement(5490..6629)
                     /locus_tag="RJ318_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HDV7429923.1"
                     /translation="MIDYHQIESRLSALEKLPSLKDNDSITKALEKSGFSRRDFMKWA
                     GAMTAFLALPASFTPMVAKAAELADRLPVVWLHMAECTGCSESLLRSDTPTIDSLIFD
                     YISLEYHETVMAAAGWQAEENLESAIQKHKNKYILMVEGGIPMGDTEHFLTIGAHGKT
                     GYELSKMASENALAIFAIGTCSSFGGIQAARPNPSNAQPLSKVTSKTVINVPGCPPSE
                     KNIVGNVLHYLLFGELPALDVYNRPKWAYGLRIHDLCERRGHFDAGEFVHAFGDEGAK
                     QGFCLYKVGCKGPYTFNNCSRERFNQHTSWPIQAGHGCIGCSEPNFWDTMGPFEEPMA
                     SHKFDTVFGLGADSVSDKIGIGVLTLTGVAIAAHAVISSMQKDKE"
     gene            complement(6750..8591)
                     /gene="mnmC"
                     /locus_tag="RJ318_000008"
     CDS             complement(6750..8591)
                     /gene="mnmC"
                     /locus_tag="RJ318_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HDV7429924.1"
                     /translation="MKKAKLIFKDNTPFSLDFDDFYFNFKDGLNESKFVYTHSFEWKN
                     QENFIIAESGFGIGLNFFLTLKRFLETTPSKRPKKLFYISVEAFYIEKEQLREIYQKL
                     EFYEEFKELLEQFLKFYPKAKEGIYRFYFEDCFLDLVFEDIAVLKELDFKADVWYLDG
                     FSPNKNSQMFDENLIFEVARLSKKNTQICTFSSASFLQKNLKKYGFRVEKTKGFRKRE
                     MIKAYLENELEFKDKEAYFSRTFSSLKNKKVAIIGAGISSAVLAYELSLRGFEIDIFE
                     KHLELGKGASGNESGILSSLILKPKVNLGEFSELSFIEASRFYRQILDLEFKGVVEFA
                     HNDLMQERFDTQRENVLFKISKNQAFLEEGGVIFPKKLVKNLFEKSKACIYFNHEFQA
                     YKFENGCFSLKFKNDVVKSDYAVLIYAMGADAKDFVFYDEMKLSKVRGQVTHLKPFLD
                     TPFPLSSKAYICPVKDDLQVIGASYDRLNASLESKEEDDKQNIENIADFMDKNTKLEI
                     IGSKVGFRSYSSDRFMIVGNAYDEAFYKEEYKALLWTKNKEQKPAKMSCNLYFNFAHG
                     SRGFSTSVLAARYLCALINNEPLCLEKKYIHAIHPARFLIRKLKKGL"
     gene            complement(8588..10567)
                     /locus_tag="RJ318_000009"
     CDS             complement(8588..10567)
                     /locus_tag="RJ318_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDV7429925.1"
                     /translation="MAKIFVFLVFVFTTLFGVYENELANFDKNFIGSKSEVQVKFHHQ
                     LKSLYIQSVINEDEKTKIEILKRLIISSNTLNLDDKSYANELKESGISETSINALRKA
                     VIKDIKVQNISQDTEKSTFEPIKTVQKNEKKSSNEQIKNTEKTNSKTSQAPKSSIVSK
                     AKSDDKIYVLKSSKTNQGVEFELNADLDKDQLKSFALDEKGNYRFISDFDGVLEGGKK
                     EFKFDDYRLVISQFNPKTIRIVVYAKEKIPIDISFKEEKIIFSKETTSQKKTEQVSKI
                     SEKKQDQKTEIKTKVLETKKQDKKTNNEKENQEPLYVLDVDKISNAVVLNLSDDLDEK
                     EIAVFDTKDQKFRYVVSFKGVLEGNRKSFTFGQNVITVTQYNPKTVRVVLSAPKEFKL
                     LKELDNNNLTLGFYIQTTNQNANKKATQSSSKTLNTNYKSGKLVVIDAGHGGKDSGAL
                     SDKKGSLKEKDIVLSTALKLGNELKKRGYKVLYTRSSDKFINLRDRTKYANDKRADLF
                     ISIHANAAPNATKAKSSEGVETFFLSPARSERSKKAAEKENQGDFEEINYFSKQSILN
                     FLNREKIVASNKLAIDVQKNILTQTRKKYKIVDGGVREAPFWVLVGAQMPAILIEIGY
                     ITHPNEGKRIANKAFQDLLVKGIADGVESYFYNNR"
     gene            complement(10567..11658)
                     /locus_tag="RJ318_000010"
     CDS             complement(10567..11658)
                     /locus_tag="RJ318_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDV7429926.1"
                     /translation="MNLQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGII
                     SSVGTGYYEERKYASKELNAKPYGSENFYSRKGLQALINNARKVCGDAPLGCNILCAS
                     NDYARIARDACEVGFNVIVSGAGLPTNLPEFTADFPDVALVPIISSAKALKIICKRWQ
                     SRYNRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAG
                     GIWDKKDIENAISLGASGVQMGTRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGY
                     PARGVRTNLLNLVDKRMGPKINCISNCVAPCGRGKEATKVGYCIADRLFDAWSGKKET
                     GLFFTGANGYRLDKLISVKELMEKLVNGE"
     gene            complement(11655..12860)
                     /locus_tag="RJ318_000011"
     CDS             complement(11655..12860)
                     /locus_tag="RJ318_000011"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDV7429927.1"
                     /translation="MDIKKILAEVKRGCAELIDEERIENLIKNYYEKGENFFIKAGFD
                     PTAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLI
                     NAKTYKTQVFKVLDKEKTQIKFNSTWLNELGAAGIVELTSTFSVARMLERDDFTKRFK
                     EQSPISICEFLYPLLQGYDSVALKSDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIM
                     MPLLEGLDGVNKMSKSLNNYIGVTEKANDMYAKILSISDELMFRYYELLSQKSLEEIA
                     QIKKDIEQGNLHPKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFE
                     IQGKIWLAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMYLEQGEYILQIGKR
                     KFAKLKVKE"
     gene            complement(12872..15067)
                     /locus_tag="RJ318_000012"
     CDS             complement(12872..15067)
                     /locus_tag="RJ318_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HDV7429928.1"
                     /translation="MKPIDEELLLEQLIDNVKNCKDLEAAKALLFEICGHDAILEKAV
                     DYCIFCHEGQFRKSGEPYAVHPILVATLVGFLSENKSNILAALLHDVIEDTNCTEEEL
                     REQFGSEVLKLVLGLTKIIEIREDNLISSKSKKSLTKSALTFRNMLLASIEDVGVLIV
                     KLCDRLHNMLTLDILREDKQKRISEETLVVYAPIAHRLGISSIKNYLEDLSFKYLMPD
                     EYKLIDNYINSNNQEMQLGLNEFISKIELLFLSNGFRQGSFEIQKRIKHSYSIYLKMQ
                     RKGIGIEEVLDLLGVRILVEKVSDCYLALGILHTHFNPLVSRFKDYIALPKQNGYQTI
                     HTTLFDAKSIIEAQIRTFDMHKIAEFGIAAHWKYKEDGSVVAPRLDWLTDISMQSINN
                     LENAEDYNAIELYEYAKDSLYVEDVAVYSPKGEIFTLPRGATVLDFAYEVHTKVGLHA
                     KSAYVNRIKVPLLTELKNGDIVRVVTSNDKFYRCSWIDSVKTGKAKASIREFCKQKIR
                     EINLASSINMLSFIFGVDKNRIETWIEKENLVRRIRQVATDSAYLKDIVNGLKKYAKK
                     SYWFDKYEIKEQKIGNFTLYCNHKIANVDFDFCCHPKRGDAVLAFVKGGNAIVHHKLC
                     DRADKMIDNNQDMVFIKWDSNIPKSYKLIFSLENKKGVLAEFLAFLAKMQINLLTINL
                     SSDLNSAVDYFEITMEIPDNINPDSVKDRLKSRCKILDFTSLNDAYKES"
     gene            complement(15051..15275)
                     /locus_tag="RJ318_000013"
     CDS             complement(15051..15275)
                     /locus_tag="RJ318_000013"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDV7429929.1"
                     /translation="MDKRIEEVAAKALEKMGNDRYRLSLVVAKRAEQLANGATPLVDF
                     DKNKNKLADIALYEIAENKITLEGLVETNR"
     gene            complement(15286..16005)
                     /locus_tag="RJ318_000014"
     CDS             complement(15286..16005)
                     /locus_tag="RJ318_000014"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDV7429930.1"
                     /translation="MQERKRVLVKFSGEALAGENGFGIENSILKFIASEIKELIKNQI
                     EVGIVIGGGNIIRGVSAAKGGLIKRTSGDHMGMLATVINAIAIQEALESSGLEVRVQS
                     AIQMEAFCETYIMRRAQRHLEKGRVVVFAAGTGNPYFTTDTTAILRAVEIDADMVIKA
                     TKVNGVYDKDPKQFDDAVFLNTLSYDEAMQDNIKVMDDTAIALAKDNKLPIVVCNMFE
                     EGNLLKIIQGDTSLCSTVKNN"
     gene            complement(16057..17250)
                     /locus_tag="RJ318_000015"
     CDS             complement(16057..17250)
                     /locus_tag="RJ318_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDV7429931.1"
                     /translation="MRKNILIFFCFFLFVDISLANAINEKTKSLEENKRIQEQLNKKL
                     EDLASDILNGEKSLKDLSLQIESLNSQTSKLEASAKAQNQELNTLTSQNEDLLKSKSN
                     MEGKLISLMAKDFAYDLPIPQGYIESEESFMAFEILGSLNKVLNEEIFKISKDYEGVS
                     RLIDDKQAQIKKINESLKDYNAQLAKLQSLKQKQISEINKQKTDRAIYAKKLDDLQAQ
                     QEELRKTLNQLKIINDKEDANSNKNDTKIVKNNQKIRQLGSSYQGSSVKRYTGKKTIA
                     PLDSFTVKQKFGNYVDPVYNLKIFNENVVLRSNKSDAVVKNVLDGKIVFAKDTSMLAR
                     VVIVEHDNGIHTIYAHLDKIAPNIKVGKNIKKGAVVGRIKNDLTFEVTQKNFHINPLE
                     LISLN"
     gene            complement(17247..18053)
                     /locus_tag="RJ318_000016"
     CDS             complement(17247..18053)
                     /locus_tag="RJ318_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDV7429932.1"
                     /translation="MKFFKTHLSLILPLLFMMFAFEFILITNATLKHYEELVNKDYNI
                     IVVSKTELDQNVVKTKVPFFAGLESLDPKDLIDRLKNDVSEKNLKVLKDSLPKFYTLK
                     LNSLPDQNELNSIKNQLLNIVGVSKVETFSKTHDKIYSLLILMKFVFWLFLFIIILLA
                     FVLFLKQMRIWLYEHTDRIEIMCLFGAPFWFRSFMLYKVVVVDCFIAFVILLAFFTQI
                     FDLSIIQESLKAVDIIFPPINFILHLTLIFLATLFICLLCVNTVMFKVKR"
     gene            complement(18040..18705)
                     /locus_tag="RJ318_000017"
     CDS             complement(18040..18705)
                     /locus_tag="RJ318_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7429933.1"
                     /translation="MPNLIQANKLTLGYDELVIKEASFAFKDDDFVFITGKSGSGKST
                     LLKSFYGDLEPISGKLEVCGSLMNKIGNLELLKLRQRIGIIFQDYKLVQEYSVEKNVM
                     LPLMIKGYSKKVCHDQATKLLKHVNLTFKADKLPNQLSGGEQQRVAMARALAHNPKLL
                     LCDEPTGNLDEYSSDIIWTLLKSARELLGTCVIVVTHRIPSNLRVDYRRFNIENGKMN
                     EIF"
     gene            complement(18775..19953)
                     /gene="trmB"
                     /locus_tag="RJ318_000018"
     CDS             complement(18775..19953)
                     /gene="trmB"
                     /locus_tag="RJ318_000018"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDV7429934.1"
                     /translation="MPNFKSKKIKEINLPYSKDDVEFLWLAKNDNVSLIYTKVQEESF
                     FLQIKKAQNGFVIKGDKHTKPSKIGYLQKALKIFKEGFCEDIINEAFGLKNNALIEKT
                     PFIVDNFDELLSRLQGKIYIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKL
                     AKAQNVNNILLIQSDARLLLSVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECAR
                     VLVQNGRFELRTDSFEYFNFTLEQFLTFPAPKFSLRKNENLEISSKYEDRWKKQEKNI
                     YDLWVWNFNQECKNYELNEFNLSSVEFSKEDLKKIEQNFKNITIKKDDFFLHFESIYK
                     QDENLLLKVAFGAFNKPEHCYLHLDKTIDFAFKEPFKIQENIKAINELKEILKVQFKI
                     "
     gene            complement(19953..21188)
                     /locus_tag="RJ318_000019"
     CDS             complement(19953..21188)
                     /locus_tag="RJ318_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HDV7429935.1"
                     /translation="MMKRFRLSFYLSFLTLLLSACSVSQMNSLASSKEPAVNESLPKV
                     ESLKSLSDMSNIAFEWEPLYNENIKGFYLYRSSDENPDFKLVGTIKDKFQTHYVDTKL
                     EPGTKYRYMMKSFNEQGQISEDGKVIEVSTAPRLEAVPFVQAVTNLPNRIKLIWRPHP
                     DFRVDSYIIERTKGDDKEFKKIAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKS
                     GSSQVVSSTSKALPPQVEHLSASTDGSSKIILTWDAPTYEDFSYYKVYSTSSSFLPFS
                     VLAKTDKNSYEDIVEGAGKSKYYKVTMVDKDGLESPMPKDGVEGKTLGNPLAPSIILA
                     QSASEGINLEWSDNDTRAVEYEVRRYGGEQNAVFKGIKEKRLKDVKALPGVEYSYEVI
                     AIDSAGLRSEPSSKVKAAQ"
     gene            complement(21133..22101)
                     /locus_tag="RJ318_000020"
     CDS             complement(21133..22101)
                     /locus_tag="RJ318_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDV7429936.1"
                     /translation="MQTFLVDENSRLDVFLAKKLNQSRNQVALLIEKDCVQVNDKIQD
                     KNSFKLKNGDIISIASLKLCNEIKPQFEVDFDIDVLYEDEDLLVLNKPSNLVVHGASS
                     VKNATLVDWLIEKKYTLSNLGGEIRAGLVHRLDKDTSGAILIAKNNFTHQKLSEQLAD
                     KSMGRIYLALIDLPLKEDKIIVEKFLMRSPSNAIKKIAIDKENKFSKNAKSAFINVVK
                     TENLTLMAAKLFTGRTHQIRAHLASLNRYILGDSLYGYKGKYDCRIMLHAYFLYFIHP
                     KTKEQIFVKAPLMEDFKNIMFEQINLGENDEKISLEFLLEFFNSFA"
     gene            22179..23279
                     /locus_tag="RJ318_000021"
     CDS             22179..23279
                     /locus_tag="RJ318_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDV7429937.1"
                     /translation="MFRLDRRILTHFDYIQPILFLPIILISFFLIFEANPFLAEKQFV
                     YACVGLFAFMVFFFFPIRKFIWIIPVAYWINIFLLLSVDIFGVEKLGAKRWLEIPFTH
                     FTIQPSEIFKPSFILMLAYLIYQNPPPKNGYKLKQFIKLSFYIILPFLLIAKEPDLGS
                     AMVLLLVGFGVLFIMGVHYKIWLSIVIAISVSSPIIYTHLLKPYQKQRIHDFISEKPS
                     YQVAQSMIAIGNGGLTGKSQDEATQTHFKFLPISTSDFIFAYMIERFGFIGGLTLIIF
                     YILLIFHLLSLNYKLKDDYFARVAINCVALFIFIYAAVNISMTIGFAPVVGIPLPFFS
                     YGGSSFTIFMIFFGILQHLITFRYFWTDIKAK"
     gene            23333..23409
                     /locus_tag="RJ318_000022"
     tRNA            23333..23409
                     /locus_tag="RJ318_000022"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23367..23369,aa:Ile,seq:cat)
     gene            complement(23518..23593)
                     /locus_tag="RJ318_000023"
     tRNA            complement(23518..23593)
                     /locus_tag="RJ318_000023"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(23558..23560),aa:Phe,seq:gaa)
     gene            23733..25076
                     /locus_tag="RJ318_000024"
     CDS             23733..25076
                     /locus_tag="RJ318_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HDV7429938.1"
                     /translation="MKQFGLDRRTFKILLAGYIIIALFGALLLHSSWAHTTPIDFLDA
                     FFTSTSAVSMTGLVVKNTAVDFTLAGQIIILALVQIGGLGYMGIGLFVYILIRKKVGF
                     SARNLLKESLFYPSMDGLFKFFKKVLLFIFTIELIGAILLTMRFALEMNFKKALWFGI
                     FHSISAFNNSGFTIFEHGFIAYKHDIAINLIITSLIIIGGLGYFVLVELYFFQRKKLQ
                     NLSLHTKMVVVASIFLIFSSTLIIFAFEYSNPQTIGHFSFFDKILSSYFIAINYRTAG
                     FNTLDMGHLHDASLFFGSLFMVIGGAPGGTAGGMKVTTVMVLLLYAYWSIRDGRVRIF
                     GHEIPRETISKAFIIAVGSAVYIVIAVILLSLLESKFDFIALLFETSSAFATVGISVG
                     NGGTLSLCALFSDPSKVIIIIMMLSGRIGVFAFLLSVFKQDKAIHLKFPEGKVNL"
     gene            25087..25737
                     /locus_tag="RJ318_000025"
     CDS             25087..25737
                     /locus_tag="RJ318_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HDV7429939.1"
                     /translation="MKNLNYGIIGLGKFGSVVADELIAGGHTVIVADKDEEALKSIQN
                     PPSYAYILDSTNISALKEAGFHDVEVVIVSIGENVEKSILTLMALKDIGVKNIIAKAT
                     SNIHGQILSKLGATKVIYPEKESAKRLVKEFLTKDADYEVFDLSANTIRAIKINIDEK
                     LAGNSLKHVAQNMKVISYKKLNSDWEILPDLETTTVYSGDVVILLGTVKELREFEH"
     gene            complement(25734..26405)
                     /locus_tag="RJ318_000026"
     CDS             complement(25734..26405)
                     /locus_tag="RJ318_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthetic enzyme MqnA/MqnD family
                     protein"
                     /protein_id="HDV7429940.1"
                     /translation="MIFGKIDYINLLPLHIYLKKYPLPNGYKASMEYKKGVPSKLNKD
                     LFYRRIDAAIISSIESARKKYKNLDLGICANKRVLSVLVEKNTSNAKDPSSATSNALA
                     KVLKQDGKVIIGDKALKLYLKDPSKYIDLCAKWHEKTGLPFVFARFSCVQKKALYKQI
                     LKKFPKTKIKIPYYILQNYAKTRDLDIKDVRYYLDEVIYHKISTKEKTALKRFVKACK
                     ALNLA"
     gene            complement(26411..27037)
                     /gene="upp"
                     /locus_tag="RJ318_000027"
     CDS             complement(26411..27037)
                     /gene="upp"
                     /locus_tag="RJ318_000027"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDV7429941.1"
                     /translation="MKNIHCINHPLIEHKLGILRAKETKPFQFRMLIDEISSFLLFEA
                     SKDFSLKEIEISTPIQKTTVKKLDEKIMICPILRAALGMLESVFKMIPDASVGFLGFV
                     RNEETLKADFYFQKLPKDAKKRTAIVIDPMFATGGTAIDACNFLKSQGVKKIKFISIL
                     AAPQGLKKFSQMHDDVEVFVACIDEGLNEKGYIIPGLGDAGDRVFNTL"
     gene            complement(27034..28269)
                     /locus_tag="RJ318_000028"
     CDS             complement(27034..28269)
                     /locus_tag="RJ318_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDV7429942.1"
                     /translation="MNLKEEALKYHLGGKIDIVPSKPMATSHDLSLAYSPGVAEPCLE
                     IAKDNELAYTYTNKANLVAIVSDGSAVLGLGNIGAQASKPVMEGKACLFKKFANVNAY
                     DIEIDVHSVEEIVNFCKALAPTVGGINLEDIAAPKCFEIEAALQDLGIPVMHDDQHGT
                     AIISTAGLMNAMEISGKKFKDIKVVVSGAGAAGIASAKMYRNLGVENIILVDSKGVIS
                     KDRNDLTPQKLEFAVDSKEKTLKEVLKGADVFLGLSAPKILDDEMVLSMAKDPVIFAL
                     ANPIPEVMPEDVARLRKDAIVGTGRSDYPNQINNVLGFPFIFRGALDVRASKITENMK
                     VAAAKALADLAKLPVSDAVKKAYNLSTLEFGRDYVIPKPFDERVKAAVSTAVAAAAVK
                     DGVAKVKNFDEKAYFESLK"
     gene            complement(28271..29662)
                     /locus_tag="RJ318_000029"
     CDS             complement(28271..29662)
                     /locus_tag="RJ318_000029"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDV7429943.1"
                     /translation="MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIE
                     DTDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDEGKAYYCYM
                     SKEELEELRAKQEAAKERPRYDGRYREFTGTPPQGIEPVVRIKAPQSGEIVFEDGVKG
                     EVRFKAEDIMDDFIIARSDGTPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYE
                     ALGFKIPKFFHVAMIHGEDGKKLSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGD
                     DEVFSLEDLKKLFDPYHINKSASCYNAKKLEWLNAHYIKTLPFEEINRQLKDLGFDLS
                     VCEKAGFLLDLLRERAKTLHDIINGAKSIVNAPQNYDENAVQKFINKNNLELLQAFAN
                     TLKDQKTGKDFEDFTNDFLEKKEAKLKDLAQPIRIALTGSAVSPSIFEVLEFLEVDEC
                     KKRIENFLKVRGK"
     gene            29727..30542
                     /gene="salC"
                     /locus_tag="RJ318_000030"
     CDS             29727..30542
                     /gene="salC"
                     /locus_tag="RJ318_000030"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SalC"
                     /protein_id="HDV7429944.1"
                     /translation="MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKAL
                     KIDRNKALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSK
                     NQSYEQFRANFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANI
                     YLSNNPQTLENIKNTKKTILKPQNASLNTSNADPRLLGLLSQIPVGGFSPVLNGKNGY
                     ELYEVKSKDGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEYLR"
     gene            complement(30579..31910)
                     /locus_tag="RJ318_000031"
     CDS             complement(30579..31910)
                     /locus_tag="RJ318_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDV7429945.1"
                     /translation="MEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLK
                     YADASICIGKARSSESYLNIPAIITAAEIAEADAIFPGYGFLSENQNFVEICAKHNIK
                     FIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVILKA
                     AAGGGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDS
                     FGNVIHVGERDCSMQRRHQKLIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFE
                     FLVDKNLDFYFIEMNTRLQVEHCVSEMVSEIDIIEQMIKVAEGYALPSQESIKLNGHS
                     IECRITAEDSKTFLPSPGKITKYIPPAGRNVRMESHCYQDYSVPPYYDSMIGKLVVWA
                     EDRNKAIAKMKVALDELLISGIKTTKDFHLSMMENPDFINNNYDTNYLARH"
     gene            complement(31912..32367)
                     /gene="accB"
                     /locus_tag="RJ318_000032"
     CDS             complement(31912..32367)
                     /gene="accB"
                     /locus_tag="RJ318_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDV7429946.1"
                     /translation="MTKEEIKELVNLFAEANISKIKIKEQDGFEIELERDMCCDVPAP
                     VCPPVPAPQPINVSVVNEAQPSQSVKSNKPSINSPMVGTFYQAPSPGAAPFVKVGSTV
                     KKGDTIAIIEAMKIMNEIEAEFDCRIAEILVADGQPVEFGMPLFAVEKL"
     gene            32516..33076
                     /locus_tag="RJ318_000033"
     CDS             32516..33076
                     /locus_tag="RJ318_000033"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDV7429947.1"
                     /translation="MGLKADNWIRKMALEHKMIEPFCEANIGKGVVSYGLSSYGYDIR
                     VGREFKIFTNVNSTVVDPKNFVEENVVDFEGDVCIVPANSFALARTIEYFKMPDNVLA
                     ICLGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDE
                     KCDTTYKDKKGKYQAQTGITLPRILK"
     gene            33127..34131
                     /gene="pseB"
                     /locus_tag="RJ318_000034"
     CDS             33127..34131
                     /gene="pseB"
                     /locus_tag="RJ318_000034"
                     /EC_number="4.2.1.115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (inverting)"
                     /protein_id="HDV7429948.1"
                     /translation="MFNKKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSRDELKQF
                     EMASVFNAPCMRYFIGDVRDKERLSAAMRDVDFVIHAAAMKHVPIAEYNPMECIKTNI
                     HGAQNVIDACFENGVKKCIALSTDKACNPVNLYGATKLASDKLFVAANNIAGNKQTRF
                     GVTRYGNVVGSRGSVVPFFKKLINEGAKELPITDTRMTRFWISLEDGVKFVLSNFERM
                     HGGEIFIPKIPSMKITDLAHALAPNLSHKIIGIRAGEKLHEIMISSDDSHLTYEFENY
                     YAISPSIKFVDKDNDFSINALGEKGQKVKDGFSYSSDNNPLWASEKELLEIINHTEGF
                     "
     gene            34133..35263
                     /gene="pseC"
                     /locus_tag="RJ318_000035"
     CDS             34133..35263
                     /gene="pseC"
                     /locus_tag="RJ318_000035"
                     /EC_number="2.6.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine transaminase"
                     /protein_id="HDV7429949.1"
                     /translation="MLTYSHQNIDQSDIDTLTKALKDEILTGGKKVNEFEEALCEYMG
                     VKHACVLNSATSALHLAYTALGVQEKIVLTTPLTFAATANAALMAGAKVEFIDIKNDG
                     NIDEKKLEARLLKESENIGAISVVDFAGNSVEMDEISNLTKKYNIPLIDDASHALGAL
                     YKSEKVGKKADLSIFSFHPVKPITTFEGGAVVSDNEELIDKIKLLRSHGIVKKRLWDS
                     DMVELGYNYRLSDVACALGINQLKKLDHNLEKREEIANFYDKEFEKNPYFSTIKIKDY
                     KKSSRHLYPILLFPEFYCQKEELFESLLHAGIGVQVHYKPTYEFSFYKKLLGEIKLQN
                     ADNFYKAELSIPCHQEMNLKDAKFVKDTLFSILEKVKKGYCG"
     gene            35256..36563
                     /locus_tag="RJ318_000036"
     CDS             35256..36563
                     /locus_tag="RJ318_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
                     /protein_id="HDV7429950.1"
                     /translation="MDKLDFRSQDFSQTGKAMYELACELFPIPRSITGQGFRDSLEIL
                     NKTLGGGILKFHSIKSGTKVFDWIVPDEWNVKEAYIITPKGEKICDFKKHNLHLLNYS
                     EAIDQEIELEELQDHLYSIEEMPDAIPYVTSYYKRRWGFCLTHNERKKLKKGKYKVYI
                     DAKHDENGVLDYADFILPSTQNSKDEILISTYLCHPSMANNELSGPVVSIFLAKWLLG
                     LKERRYNYRFVIIPETIGSIVYLSKHLECLKKHVKAGFVLSCLGDDHTYSLIHTVKEN
                     TLSDKVALHTLKNKENFKAFSFLDRGSDERQYNAPLVNLGIVGVCRTRYGDYDGYHNS
                     KDDLNFISEKGLMGGLQSMQEMILNLEINAVYENTIVCEPNLGKRGLYHTLSTTNDIP
                     LACNFLAYCDGENDIIDIANILNMQAYEFKELLEKIKFYGLVK"
     gene            36560..37350
                     /locus_tag="RJ318_000037"
                     /pseudo
     CDS             36560..37350
                     /locus_tag="RJ318_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858419.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside N(3)-acetyltransferase"
     gene            37371..38162
                     /gene="legH"
                     /locus_tag="RJ318_000038"
     CDS             37371..38162
                     /gene="legH"
                     /locus_tag="RJ318_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase LegH"
                     /protein_id="HDV7429951.1"
                     /translation="MKYLLEFENKKYSTYDFIETFYKLGLQKGDTLCVHTELFNFGFP
                     LLSRNEFLQTILDCFFEVIGKEGTLIMPTFTYSFCKNEVYDKINSKTKMGALNEYFRK
                     QTGVKRTNDPIFSFAIKGAKEELFLKDTTSCFGENCVYEVLTKENGKYMTFGGQGHTL
                     THYAEEQFNVFYRYHKIFSGILIDENNISYNKTISYYVRKLDISSEPNLINIINIVNN
                     TKNFKKNNFAGDHINIYNAKEYIEILWKKLDINQTILIENYDTIY"
     gene            38193..38423
                     /locus_tag="RJ318_000039"
     CDS             38193..38423
                     /locus_tag="RJ318_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7429952.1"
                     /translation="MEKQFYEILENILETKVDENTNLSMENCKNWTSLAHIDIIMSLE
                     EEFEIKFNKEDLSLLKSQSTLLEKIQTLKAEK"
     gene            38420..39313
                     /locus_tag="RJ318_000040"
     CDS             38420..39313
                     /locus_tag="RJ318_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV7429953.1"
                     /translation="MKENIEKLFQAIAQKNPIHSKYLKKIEFPQEDEEEFDKLISYYI
                     QDGISIKEQCDCYLLILNDTLEETKFFIENGAYRYSSFDEVKDKVYFNESYMKQYMIG
                     LALSSFVWIAHIKVRKYFSQYLKNFTPKTTYFEIGPGHGEYFARAVKSGKFSAFYGLD
                     ISPTSCELTQKMVKQQVGGLITKCDFLCQDFFIYDFDKKADLIVIGEVLEHVEKPLEF
                     LKRSKELLSDGGEIFATIPINAPAIDHIYLFSHPDEVKDLIEKSGLKFKAYECFMAND
                     YSLEKALKFKNAITMAVVLNA"
     gene            39306..39722
                     /locus_tag="RJ318_000041"
     CDS             39306..39722
                     /locus_tag="RJ318_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDV7429954.1"
                     /translation="MLNTTLNLPLHHIGVACKNLEKERECFFKLGFYKESEFIDEKQG
                     VRGEFIIPCNEAFPQYRFELLQNLNDKGPLDSYLKNNTKMYHLAYESKNIAQDLILLE
                     QQGGICIVPIMQASYFAKLCFIMMPNRLLIELVELK"
     gene            39719..41281
                     /locus_tag="RJ318_000042"
     CDS             39719..41281
                     /locus_tag="RJ318_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDV7429955.1"
                     /translation="MNLFSPHLKRNELIKFAKELDFSKSQDLLINVHRNHAFEGVQSI
                     IAPFLHFANLRAEFNFSSYDDSLSFDNFKEASLELLWLDLTRYKNNVQNFIEERLLEL
                     RKISQNPILVLSLGEFKTDKKILNCEIFNIEKLIKEYFDEEDILDLAKEELTGSKLNN
                     KALIFLAQILGLSLIPALVKPALKALVLDLDNTLYQGILGEEGIDNLNLSPLHKTLQE
                     KIKTFKKQGFLLALASKNEEKDAKKLFEIRKDFILQWDDFDARMINWEPKGENILKIA
                     KKFNINTNAMLFIDDNIAELENTKFTGIKTLLCDENILYKIKLFPNLLKLSNTKEDQI
                     RAKDIAANALREELKSLSDEEYFQNLEISLNFSKNDLQNIPRISELLGKTNQFIANYT
                     RLNQEKVAQHMQKELIVSVSMSDKLSDSGIIAIFVFSCKEGNLFIDDLCISCRALGRK
                     LETRMFFKAFELALHFFDLKNNNARLYYQKGERNMPFLSFLEQISKKIEKNSALVSFQ
                     NLNFKGLIIHEN"
     gene            41271..42332
                     /locus_tag="RJ318_000043"
     CDS             41271..42332
                     /locus_tag="RJ318_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HDV7429956.1"
                     /translation="MKTRFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKK
                     VIGLNTRYICNENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACY
                     LHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGKILLVCGDTLSKFIHPKNM
                     NLAPIFGDGVSATLIEKTDFNEAFFELGSDGRHFDKLIIPKGAMRIPKADIFNDDSLM
                     QTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDEKDIAFHLFHQSNAYLVD
                     CIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEFKASLSAFGAGLSWGSA
                     VLNFKDLYTKDILIYTKEK"
     gene            42332..42553
                     /locus_tag="RJ318_000044"
     CDS             42332..42553
                     /locus_tag="RJ318_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7429957.1"
                     /translation="MTKTEFLEELKEAMHRDEDLNEDMLLDDIDEWDSLAFVSVMVLY
                     KNLFALKITAEDLKNCQKVSDLIDLAKLD"
     gene            complement(42567..43781)
                     /locus_tag="RJ318_000045"
     CDS             complement(42567..43781)
                     /locus_tag="RJ318_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDV7429958.1"
                     /translation="MLINQTFEIDSCDDIELSIKRTSKLEYRISYDDEKDLKAIVFVI
                     GGYGANANISFLDFDREYIAKNFNVVAVHVFYHCFCHRRSNVEKYSAYKYFQEEDIEN
                     IKNLLNQFHFFYSEINNDNALFLANSLVKHVENLKMQNKLDHNFKLNFTSTFIPPNGD
                     YQNYGIMAAIDHINALKDLVKRFPEFADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVI
                     DNSGSALPSPMFILERESGQYDYFEEYPHNKIGFFIKTHWNADVNSKYFFHAENYLIR
                     IIPNLAHLTIQASVNKNIILVSYHSLKDPFNTAKDKQTLFLAYKELGYDATLHLIKDE
                     SEIDGRFIKDLNHGMRITDKALFRKELPLMLEKLQKRKSFMQENSISYPCGNKVFTFK
                     DVGDKFELAIKD"
     gene            complement(43794..44381)
                     /locus_tag="RJ318_000046"
     CDS             complement(43794..44381)
                     /locus_tag="RJ318_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDV7429959.1"
                     /translation="MDGVIDNSGSAVPPLNYIIGRELEFKSKDTNGDMYMQGDHFFVS
                     CFLKTHWTRKENSPYFFNNENYFIRTLLNKDHLILQSQKNKNIIYVSYHSKEDPLTPA
                     NFKELTMQILKILGYDVSLNLIDENKIDGKFIKNLDHGCGIPDKALFRKELPLMLEKL
                     QGRKSFMQENSISYPCGNKVFTFKDVENQLKLIIN"
     gene            complement(44365..45021)
                     /locus_tag="RJ318_000047"
     CDS             complement(44365..45021)
                     /locus_tag="RJ318_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDV7429960.1"
                     /translation="MLINQSFEIDSCDDVELNIKRTSKLEYRISYDDEKEIKAIVFII
                     GGYGANANIYFLDSYRNYIAKNFDVVAVHVFYHCFCQRRSDVEKYSTLADFTKDDLKL
                     IEKVLRKYNIPCDQLANNTVVSHCEYLSEIMTELKMLNRLPYDFEERLSATFIPSRGE
                     YQNFGIMAAIDHINALKDLVKRFPKLADLPKIYGGGVLWRILSLAHSKNSSLVCGWRD
                     "
     gene            45082..46590
                     /locus_tag="RJ318_000048"
     CDS             45082..46590
                     /locus_tag="RJ318_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HDV7429961.1"
                     /translation="MTTHIYDFLEKSLIKFSEKTAFVEPFVKERKEITYKDFDLFSKK
                     LASEILKTLGNDNPTQAPVLIILPKGIDCLISFFGVALSGNFYTLLDEKSPKERVEKV
                     IEVLKPKLFITSKDLNFNLDLPTLYTQDFESFNIDESLIKHAKEKHIDTNLLYVFFTS
                     GSTGIPKGVSIAHKSVIDYTFWVCETFKFDENEILANQAPFYFDNSILDIFSSVKSGA
                     TLHLLPNHLFAFPNKILECLEKEKVSTIFWVPSVLIYFANTEALNNFSLNALKKMLFC
                     GEIMPNKQLNIWRKHLPNALFANLYGPTEITDVCSFYIINRTFKDEELLPIGKACKNT
                     ELLVFDENMNFISPKQIGVKGELFVRGTSLSLGYYNDKEKTKQAFIQNPLHDNYLDLL
                     YKTGDIVSYNEFGELLCYGRADNQIKYMGHRIELGEIESVINSHVNIKNSACIFKEDI
                     ICFYESEEEINFKDFLKDKLPSYMIPKNFIKLDKFKLNQNGKIDRKVLKELV"
     gene            46630..46857
                     /locus_tag="RJ318_000049"
     CDS             46630..46857
                     /locus_tag="RJ318_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7429962.1"
                     /translation="MQEIKQFFINIERTDINESMENLVSEDFIDSIDIMALVAEIEKF
                     YKKPLKAEFITPENFESFENIKKMLETAMKD"
     gene            complement(46854..47924)
                     /locus_tag="RJ318_000050"
     CDS             complement(46854..47924)
                     /locus_tag="RJ318_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7429963.1"
                     /translation="MTAYLHIGTTNTGNQEKQGFLMQNEEKLLQKAYIYPKSLRVANR
                     HWALVDMVLELVQKEDILKKESVLSHITNERLLRAIENFKSESALHKDKKFIFSAEGI
                     VWDFSTKKHVEILEKIMRELGFTQIYIIVYFRDTLGYLNSHCSQDHKNNMGYYSADFA
                     PQDHPRKYIFDYEWICKTHAEVFGEENLIVRLLREDYVGGTLLKDFVYHLGLEWDESF
                     VLKQTKNESFNLLGMELMSRLNQKDLKQDNLNSLLFMARRKFEGSKEKRLKFAVQKDI
                     AKAYVDYFASSLEWVKNKYFPHKNSLFTPVNWEEYEQNYTLTHMLSKDWDDVADFIAQ
                     IIVSKNEIISSLKEQLELARKD"
     gene            complement(47946..49160)
                     /locus_tag="RJ318_000051"
     CDS             complement(47946..49160)
                     /locus_tag="RJ318_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDV7429964.1"
                     /translation="MLINQTFEIDSCDDVELGIKRTSKLEYRISYDDEKDIKAIVFIV
                     GGFGANANISFLDFDREYIAKNFDVVVVHVFYHCFCARQSIDQKYNPKLIPNQDDLER
                     VNGILKNINLGHLSVNKDNFEQIIPLIEQKVNKMKQAGLVDESQKIELSCDFIPPNGD
                     YQNYGIMAAIDHINALKDLVKRFPKFADLPKIYGGGSYGGYLALLIAKIAPWYVDGVI
                     DNSGVCLPFLACILGREMNQGEFYFEGSGYRLYCFVYKYWNRNMNSSYYFGDENYLIR
                     AVLNSNHLQIQSNLNKNTIFVSYHSIQDMGAPVQNKIELYKCYQELGYDATLHLIKDE
                     NDIDGRFVKSLEHGLRMTDRALFRKELPLMLEKLQGRKSFMQENSISYPCGNKVFVFK
                     DLEDKFELEMIN"
BASE COUNT        16754 a         8487 c         6809 g        17152 t
ORIGIN      
        1 aaattttaaa taaaattatg taaagatttt aaagactaca taaaaattta caaggacact
       61 agaatgatta atgtgttgat gatagaagat gatcctgact ttgcacaatt attatctgaa
      121 tatttagcgc aatttaatat taaaatcaca aattttgaaa atcctaaaag tgctttaaat
      181 gtgggtattc aaggctatga ttgtctgatt ttagatttaa ctttacctgg aattgatggt
      241 cttgaagttt gtagagaaat ccgacaaaaa agcaatattc ctattatcat ctcatcagct
      301 agaggtgact taagcgataa agttgtgggg cttcaaatcg gtgctgatga ttatctacca
      361 aagccttacg atccaaaaga aatgtatgca aggattatga gtcttattcg tcgcacaaaa
      421 agagttgaac acactaataa tgaaaatatt aactctgctt tcaaaattga taaaagaaga
      481 catgagatca cctatgaaga taaagtttta acacttactc ctgctgaatt tgaaatttta
      541 gaatacctta tccaacaaca cggatatagt gtttcaagag aacagcttgt aagtcgctgt
      601 aaaaatctaa aagataaaga ttctaaaagc cttgatgtta tcatcggtcg cttaagggta
      661 aaaataggag atagttcaaa atctccaaaa catatttttt ctgttagagg tataggatat
      721 aaactgatag gatgacaaaa aattattcta ttcataccaa actgattatt ttatttgttg
      781 ttactttttt cttggtttgt gtgcttttta tcgttctttt aaaaatagaa gggaatacct
      841 ataatgaaga agaaagttta aaacaagaaa atcttataaa aaatttactc atctcctatg
      901 aaaacacttc aggtgttgaa ataggagctt atcttggaaa cagcggtttt aacgctgtac
      961 aaaatcccaa tcttgtaaaa gctataagaa ataatggaca atcacttttt aaagcaggcg
     1021 gagagctttg tactctttct tctttaaaat atcatagcaa tctttatttt gatgttcaat
     1081 gtaaagattt tgatggcttg tatgaagaaa atactagtga tagggtttat aatcttttat
     1141 tgataggatt tttctctttt tctttgttgg ttgtttttat gtatttttct gtattaaaat
     1201 ccttagaacc tttaaaaaaa ttaagaagac aagttgccga agttgcaaat tgggaacaac
     1261 ctgattttct agactatcaa gaagatgaag taggcaagat cgcctttgaa tttcaaaaag
     1321 ctttcaagaa aaaccaagaa ttaatccaat caagacaact tttcctaaga acaatcatgc
     1381 atgagttaaa aacccctata ggaaaaggga gaatcatttc tgaaatgatc aaagaagaca
     1441 gacaaaaaga aagacttatc gctatatttt tacgcatgga ttctttgatc aatgaatttg
     1501 ccaaaatcga aaatttattt tcaaaaaact acaacttaca ctttaaacct agtcgtttta
     1561 gcactatact tgaagaagct aaagaacacc ttatgataga tgattttaat aaagttgtaa
     1621 aagtcgatat aagatatgac gctttaatca atgttgatat ggaaattttc tctgtaattt
     1681 taaaaaatct tatcgataat gccttaaaat actcaaacaa tggtacttgt gagctttttt
     1741 gttgtaaaga atgttttacc attaaaaatc caggcaaacc tttagcagag cctatagagc
     1801 attatcttga agcttttaca agagaaaaac acaatcaagt caaaggtatg ggactaggac
     1861 tttatatagt ttcagaggta tgtaaactgc ataattttga tttgatttat ttttatgatg
     1921 atggaaagca ttgctttaaa attttctttg gagataaaga aaaataatgg taaaaggcct
     1981 ggaaaaattc aatgaacttg ttgaaagttt tgcaaattta cctaccatag gaaaaaaaac
     2041 cgccataagg cttgcttatc acctttgcat aaataatcaa attgatggta tgaaactcgc
     2101 acacaatata gaaaatgcta tccgctttat aaaaccttgt gagcaatgcg gtgctttaag
     2161 cgaaaatgag ctttgcgaaa tttgtagcga tgaagaaaga aataaaaaca ttttatgtat
     2221 agttgaaagc ccaaaagata tattaacact cgaagagagt caaagttaca atgggctata
     2281 ttttgtttta gatgagttaa atgaagaaaa acttgaaaaa ctaaagcaaa tcatacttaa
     2341 gctaaatatc tctgagctca tttttgcatt gacacatagc attaattctg atgcaactat
     2401 cttttttata gaggataaat ttaaaggctt aaacctaact tttagtaaaa tcgctcaagg
     2461 aattccaagt ggtgtaaatt tagaaaatgt ggatttaatc tctttaaata aagctatgaa
     2521 ttttagaaca aaaatttagt aatttttata agaaatatcg gctaattctt gcaaagaaaa
     2581 atccgcaatc ttttcataag caaaaccttc cttgcttaaa aaatcaagta aagttttttc
     2641 catgatttta gctccttgta taagctcatc tgaaagctta aaactcatcg cttcaatacg
     2701 ctttggcaca caagctaaga tgtgtgtttt aggcaaatct cctgcaagtt ccatgtattg
     2761 taaggtttga agcatttcta tttcatgggc acttccactc cagctaattt tattaggcat
     2821 agcatcataa ggaaagaaaa atacatctcc tatactcgca ccttgcgctt ctatacagtc
     2881 taaaacgata agtctatcgt atcgagcgat gatatagcta agctgcaaag ccaaagttcc
     2941 accatcaaca aaatctaaag taaattcaga atgagtgaat ttgtagtttt tttcaagttg
     3001 tttgcaaaga tgaacgccta agccttcatc cgcaaacatg atattaccta ttccaaggac
     3061 taagaatttc aatgctgttc ttcttttaca aatttatatc cgctaataat agcatccata
     3121 gcaccatctt taccttttac tgcgttaaaa atcgccatgt aaatatgtac tggcacaaaa
     3181 atcataatta cccacatcaa aattctatga taagttctta catcggccaa accgcccatt
     3241 gcagcttcaa gcggtcttaa aatatgatat aaaagcccac ctaagccctc atggtaagta
     3301 tgagtataaa gaataagccc tgtaagaatg atacctaata tcacaagata aaagaaaaaa
     3361 taagttacaa attgcaaagg attataaacc ccttttaaat gcggatgttt tcctaagaaa
     3421 atgtaaaatt ttacttgttc tatccataat ttgatattaa aaatatccca tacacttctg
     3481 cgttcttttg cgcttacctt atcgcagaaa aacaaatata ctttaaaaat aatacaagcg
     3541 attaaaacaa aacccaccgc ttgatgtact aagcggtatt ttgcttgcat aaaatttaca
     3601 ggttcaccgt tactaatagg gctttggaac acataggaaa gataataccc tgtgccaata
     3661 agaatcacta tagcaatagc tcttacccag tgcgttaaac gcaaacctat gctaaattca
     3721 tattcagctt ttctttgcaa tttttcttct ttgttttgca tgaaagcctc cttataaatt
     3781 gacattcact ttatattcac ttagattatt gcccttagta tccattacat gcaccgcaca
     3841 agcaatacaa ggatcataag agtgaatttt tctaatgatt tcaagtggtt gttttacatc
     3901 agcgatttta agtcctatca aacattgctc ataacttcca cctacgccat ttgcgtcttt
     3961 tggacttgca ttccaagtag aaggcaccac agcttgccaa ttttcaataa caccattttt
     4021 aattctacac caatggctta atgttccgcg tggcacatgc cccatatagc gtcctttgta
     4081 ttctttagaa ttatcgatca cataaggagc acaagtactc tggtctactt ttaaattttc
     4141 aactaaatta ttaaacgctt ttaaagcatt atttgcaacg atttttgctt caatacaacg
     4201 agcagctgtt cttccaagtg tactaaatac agcatttaaa ggaagtcctg tttcttttaa
     4261 gaactcatct actacaggaa caacattttg attaccttta gcataattta caacgacatt
     4321 tgctaaaggt cctacttgca tagggtttcc ttcatagcgt ggagctttaa tccagctata
     4381 tttaccctta gtatcaaaca ctttagaatg gacattattt ccatgatgat ctacgctttc
     4441 tccatctaca agtcctgtat aatttggatt tgttttgcca tcataaggat gtaaaggttc
     4501 attgtctgca taccaagaat gagttgcctc ttcagtaatc ttatcttctt ctacttcata
     4561 aaccttgctt aaatctccat ttttgataat accactttca aaaagccatt catctcttcc
     4621 gatttggaat tctttaaagg tataaagatt atttacccct atatcattta aaacacttgc
     4681 ttcatgtgca taagcttttc ctgccatcac aagatcagga taatacgcac gattaacaaa
     4741 gtcttgcact tcttggaatt taaccatata ttcacccatt cttgcaggat cgagtaaatc
     4801 cataacgcaa gttacaccac caacggttaa gctttgtgga tgtggatttt tagctccaaa
     4861 aatcgccata cattgagcaa tgattctttg aattcttaaa cattctagat agtgagaaag
     4921 aacgattaaa ttttgctcag gacttaaacg ataagttgga tgaccataat acgcattagc
     4981 aaaaggtcct aaatttcctt tatctacaaa agttttaagt ctttgttgca cttcaagaag
     5041 tttatccgca cctgttgcat aaggatttga agtgtattta aaagcttcat cgcttgcttt
     5101 tttaacatca gcacttaaag cacttaccac atcagcccaa tcaagcccat gaagttgata
     5161 aaaatgcaca atatgatcgt gtaaaaataa agccgcattc attaaagttc ttgttaaaag
     5221 cgcatttaaa ggcggagtaa tacctaaagc attttcaaca gcaactatac ctgctttata
     5281 atgtgaaaaa gtacaaactc cgcaaattct ttgcgtcata aaacccgcat ctcttggatc
     5341 acgccctttt actatggttt caataccacg ccacaaagta gagcccgcat aagcttcttt
     5401 taccacattg ttatcatcaa caacaacttc aactcttaaa tgcccttcaa ttcttgtaat
     5461 aggatctacg attatttttt gactcatttt tattccttat ctttttgcat ggaagatata
     5521 actgcgtgtg ctgctatagc aacgcctgtg agtgtaagca cacctatacc gattttatct
     5581 gaaacactat ccgcacccaa accaaaaacg gtatcaaatt tatgactagc cataggctct
     5641 tcaaaaggtc ccatagtatc ccaaaaatta ggctcagaac aacctataca accatgccct
     5701 gcttgaatag gccaagaagt gtgctggtta aatctctctc ttgagcagtt attaaaagta
     5761 taaggtcctt tacaacctac tttataaaga caaaaacctt gttttgctcc ttcatcccca
     5821 aaagcatgta caaattcacc cgcatcaaaa tgtccgcgtc tttcacaaag atcatgaatt
     5881 cttaaaccat aagcccattt tggtctatta tacacatcaa gtgctggtaa ctcaccaaat
     5941 aataaataat gaagtacatt acccactata tttttttcac ttggaggaca gcctggaaca
     6001 ttgatcacag ttttgcttgt tactttgctt aaaggctgcg cgttgctagg atttggtctt
     6061 gcagcttgaa ttcctccaaa gctagaacag gttcctatag caaaaatcgc caaagcattt
     6121 tcacttgcca tttttgaaag ctcatagcct gtttttccat gtgcacctat ggttaaaaaa
     6181 tgctctgtat cacccatagg gataccacct tcaaccatta aaatgtattt atttttatgc
     6241 ttttgaatgg cactttctaa attttcttca gcttgccaac ctgctgcagc catcactgtt
     6301 tcgtgatatt ctaaagaaat ataatcaaaa atcaaactat caatcgttgg agtatcactt
     6361 cttaacaaac tctcgctaca gcctgtacac tcagccatat gaagccacac aacaggaagc
     6421 ctatcagcaa gctcagcagc ttttgccacc ataggagtaa aactcgctgg caaagccaaa
     6481 aatgcagtca tagcacctgc ccatttcata aaatcccttc tagaaaaacc tgacttttct
     6541 aatgcttttg taatactatc attgtctttc aaagaaggaa gcttttcaag agccgataaa
     6601 cgcgactcta tttgatgata atcaatcatt atatttcctt tataacatga aatttattct
     6661 ctataaataa taaaataaag aaagttaaaa taaagttaaa aacttactct cataagtaaa
     6721 tattagcatc actcttaatt aaagcttaat cataagcctt ttttaagttt gcgaatcaaa
     6781 aatcttgcag gatgaatagc gtggatgtat tttttttcta aacacaaggg ttcattattt
     6841 atcaatgcac acaaatacct tgccgctaaa acacttgtac taaaacccct tgacccatga
     6901 gcaaaattaa aatacaaatt acaagacatt ttagctggtt tttgctcctt attttttgtc
     6961 cataataaag ctttatattc ttctttataa aacgcttcat cataagcatt tccaactatc
     7021 ataaagcgat cactcgaata agatctaaaa cctactttag aacctatgat ttctaatttt
     7081 gtatttttat ccataaaatc ggctatattt tctatatttt gtttatcatc ttcttctttt
     7141 gattctaaac ttgcattaag cctatcataa cttgcaccaa ttacttgcaa atcatctttt
     7201 acagggcaaa tataagcctt agaagataaa ggaaatgggg tatctaaaaa aggttttaga
     7261 tgtgtaactt gacctcttac tttgcttaat ttcatctcat cataaaaaac aaagtctttt
     7321 gcatctgcac ccatagcata aatcaaaacc gcataatcac ttttaacaac atcattttta
     7381 aattttaaac taaaacaccc attttcaaat ttataagctt gaaattcatg attaaaatat
     7441 atacaagctt tgcttttttc aaaaagattt ttaaccaatt tttttggaaa aatcactcca
     7501 ccctcttcta aaaaagcttg attttttgaa attttaaaca aaacattttc tctttgcgtg
     7561 tcaaatcttt cttgcattaa atcattatgt gcaaactcca ccacaccctt aaattctaaa
     7621 tctaaaattt gtctataaaa acgacttgcc tctataaaag aaagctctga aaactcccct
     7681 aaatttacct taggctttaa gattaaagag cttaaaattc cactttcatt tccacttgca
     7741 cccttgccta attctaaatg tttttcaaaa atatctattt caaaacctct taaactaagc
     7801 tcataagcta aaacagcact tgatatacct gcaccaataa tagctacttt tttatttttt
     7861 aaagatgaaa atgttcttga aaaatacgct tctttgtctt taaactcaag ctcattttcc
     7921 aaataagctt taatcatttc tctttttcta aaacctttgg ttttttctac tctaaagcca
     7981 tattttttta aatttttttg caaaaaactt gccgaagaaa aggtgcaaat ttgtgtattt
     8041 tttttagaaa gccttgccac ttcaaagatt aaattttcat caaacatttg cgagttttta
     8101 tttggagaaa atccatctaa ataccaaaca tcagctttaa aatccaattc ttttaaaaca
     8161 gctatatctt caaaaacaag atctaaaaaa caatcttcaa aataaaaacg ataaattcct
     8221 tctttagcct taggataaaa ttttaaaaat tgttctaaaa gctctttaaa ctcttcataa
     8281 aattctagtt tttgataaat ttctcttaat tgttcttttt cgatataaaa agcttctacg
     8341 ctaatataaa aaagtttttt aggacgctta gaaggggtag tttctaaaaa gcgtttcaaa
     8401 gtaagaaaaa aatttaaacc tatgccaaaa ccactctctg cgataataaa attttcttga
     8461 tttttccatt caaaagaatg agtgtaaaca aatttgcttt catttaagcc atctttgaaa
     8521 ttaaaataaa aatcatcaaa atccaaagaa aaaggagtat tatccttaaa aattagctta
     8581 gcttttttca tcggttgtta taaaaataac tctcaactcc atcagcaata cccttaacca
     8641 ataaatcttg aaaagcttta ttggcgattc ttttgccttc atttggatgt gtaatatagc
     8701 caatttcaat caaaattgca ggcatttgcg cacctactaa aacccaaaaa ggtgcttctc
     8761 ttacaccgcc atctacaatt ttatactttt tgcgtgtttg agtgagtata tttttttgta
     8821 catcaatggc tagtttattt gaagcaacga ttttttcacg atttaagaaa tttaaaatac
     8881 tttgttttga gaaataatta atctcttcaa aatccccttg attttctttt tctgctgcct
     8941 ttttacttct ttcacttctt gcaggactta aaaagaaagt ttccacgcct tcgctacttt
     9001 tggcttttgt ggcatttggt gctgcgttag catgtataga aataaacaaa tccgctcttt
     9061 tatcattggc atatttggtt ctatcacgaa gattgataaa tttatccgaa cttctagtat
     9121 aaagcacttt ataaccgcgt tttttaagtt catttccaag ttttaaagcc gtacttaaaa
     9181 ctatatcttt ttcttttaaa cttccttttt tatcacttaa agcaccgcta tcttttccac
     9241 catgccccgc atcgataacc acaagctttc ctgatttgta atttgtattt aaagttttac
     9301 tagaactttg agttgctttt ttgtttgcat tttgatttgt agtttgtata taaaaaccta
     9361 aagtgagatt attattatcc aactccttta aaagtttaaa ttctttagga gcactcaaaa
     9421 ccacacgaac ggtttttgga ttgtattgag taactgtaat cacattttgt ccaaaagtaa
     9481 agctttttct attaccttct aacacaccct taaaacttac aacatatcgg aatttttgat
     9541 ctttggtatc aaatactgct atttcttttt catctaaatc atcgcttaaa tttaacacca
     9601 cagcattaga aattttatcc acatctaaaa catataaagg ttcttgattt tctttttcat
     9661 tattggtttt tttatcttgt ttttttgttt ctaaaacttt ggttttaatt tctgtttttt
     9721 gatcttgctt tttctctgaa attttactaa cttgctcagt ctttttttgg ctagtagttt
     9781 cttttgaaaa aattattttt tcttctttaa aagatatatc aataggaatt ttttctttag
     9841 cataaaccac tatgcgtatg gttttgggat taaattgtga aatcactaaa cgatagtcat
     9901 caaatttaaa ctctttttta cccccttcta aaaccccatc aaaatcacta ataaaacgat
     9961 agtttccttt ttcgtctaaa gcaaaacttt ttaattgatc cttatccaaa tctgcattta
    10021 gttcaaactc tacaccttgg tttgttttac ttgactttaa aacataaatt ttatcatcgc
    10081 tttttgcttt agaaacgata ctgctctttg gtgcttgcga agttttagaa tttgtttttt
    10141 ctgtattttt tatttgttcg ttagatgatt ttttttcatt tttttgaact gtttttatag
    10201 gttcaaaagt tgatttttca gtgtcttgag aaatattttg aaccttaata tctttaataa
    10261 cagcctttct taaagcatta atacttgttt cacttatacc actttctttt aactcattag
    10321 catatgactt gtcatctaaa tttaaagtat ttgaactgat aatcaatctt tttaaaattt
    10381 caattttagt tttttcatct tcattaataa cactttgtat ataaaggctt ttgagctgat
    10441 ggtgaaattt tacttgcact tcacttttag aaccgataaa atttttatca aaatttgcaa
    10501 gttcattttc ataaactcca aaaagagttg tgaaaacaaa tactaaaaat acaaaaattt
    10561 tagccattat tcaccattaa ccaatttttc cataagttct ttaacactga taagcttatc
    10621 taaacgatat ccatttgcac ctgtaaagaa aagtcctgtt tcttttttgc ctgaccacgc
    10681 atcaaaaagc ctatctgcta tacaataccc tactttagtc gcctcttttc cacgtccaca
    10741 aggcgctaca caattgctta tacaattaat ctttggaccc attcttttat ctaccaaatt
    10801 taaaagattg gttctaactc cacgagcagg atagcccaca ggagatttaa taagctctat
    10861 atcttcttct ttagaagcta gcaaaacgct tttaaactct tcactcgcat cacattcaaa
    10921 agttcctatg aaacgcgttc ccatttgaac accactagcc cctaaagaaa tagcattttc
    10981 tatatctttt ttatcccaaa ttccacctgc agcaatcacg ggaaaagacc cccaattttt
    11041 agcctcttct accacaggag cgattaattt ttctagctga taattcggat ctaagcactg
    11101 ctcataagta aaaccttgat gacctccact ttttggccct tctaaaacca ctgcatcagg
    11161 taagcgattg taacggcttt gccatctttt gcaaataatt tttaaagcct ttgcagatga
    11221 aatgataggc actaaagcca catcaggaaa atctgcagta aattcaggta aatttgtagg
    11281 aagtccagcg cctgaaacaa tcacattaaa accaacctca caagcatcgc gtgctattct
    11341 tgcataatca ttacttgcac ataagatatt acaccccaaa ggtgcatcgc cacaaacttt
    11401 tcttgcatta ttaatcaaag cttgcaaacc cttgcgtgag taaaaatttt cacttccata
    11461 aggcttagcg tttaattctt tacttgcata ctttctttct tcataatatc ctgttcccac
    11521 agaagaaata atcccaagtc caccatttaa agaaactgca gaagctaatc tatcccagct
    11581 tatgcctagt cccattcctc cttgaaaaat gggatatttt atagtatgtt ttcctatttg
    11641 taagggttgt aaattcattc ttttaccttt aattttgcaa attttctttt acctatttgt
    11701 aagatgtatt ctccttgttc taaatacatt tgctcgtcgc taactttttg agaatttaca
    11761 cttactgcat tagcactgat gcttcttctt gccgcagaag tagaactttc caaaccacat
    11821 tcaaccaaag ccttagcaag ccaaattttt ccttgtattt caaactcagc catatcactt
    11881 ggcaaagcat tttgagaatg aattctatca aattcagact tagcattatt agcctcttct
    11941 ttggagtgaa aacgctctgt aatctctaaa gctaaatttt ctttagcttt tttaggatgt
    12001 aaattgcctt gttctatatc tttttttatt tgcgcaattt cttctagact tttttgactt
    12061 aaaagttcat aatatctaaa catcaattca tcactaatac ttaaaatttt agcatacata
    12121 tcattagctt tttctgtaac accaatgtaa ttatttaaac tcttactcat tttgtttaca
    12181 ccgtctaaac cttcgagtaa aggcatcata atcacagctt gttcttttcc tatgttataa
    12241 actctttgaa gctgtcttcc catcaaaaga ttaaattttt gatccgttcc acccatttca
    12301 atatcgcttt ttaaagccac actatcatat ccttgaagta aaggatacaa aaactcgcaa
    12361 atcgaaatag gactttgctc tttaaatctc ttggtaaaat cgtcacgctc aagcattcta
    12421 gctacactaa aagttgaagt aagctctact atacccgcgg ctccaagttc attaagccaa
    12481 gtagaattaa acttaatctg tgttttttct ttatccaaaa ccttaaaaac ctgcgtttta
    12541 taagttttag cattgattaa aacttgctct ttatccagct ttttacgcgt tgcacttttt
    12601 ccacttggat cgccaatttg tcctgtaaaa tctccaatca aaaactgcac aatagctcca
    12661 tgtttttgca aaaaagccat ttttgttaaa accacgctat ggcctaaatg taaatcaggc
    12721 gctgtaggat caaaccctgc ctttataaag aaattttcac ccttttcata ataattttta
    12781 attaaatttt ctattctttc ttcatcaata agctctgcac aaccacgctt aacttctgct
    12841 aatatttttt ttatatccat aataaacctt tttaactttc tttataagca tcatttaaag
    12901 atgtaaaatc taaaatttta caacgagatt ttaacctatc cttgacacta tctggattga
    12961 tattatcagg aatttccatt gtaatctcaa aataatctac cgccgaattt aaatcacttg
    13021 ataaattaat tgttaataaa tttatctgca ttttagctaa aaatgccaaa aattccgcta
    13081 aaacaccttt tttattttcc aaagaaaaaa tcaatttata agatttaggg atgttagaat
    13141 cccattttat aaataccata tcttgattat tatctatcat tttatcagct ctatcgcaaa
    13201 gcttatgatg gacaatagcg ttaccacctt taacaaaagc taaaacagca tcacctcttt
    13261 ttggatggca gcaaaaatca aaatccacat tagcgatttt atggttacaa tatagagtaa
    13321 aatttcctat tttttgctct ttaatctcat atttatcaaa ccaatatgac ttcttggcgt
    13381 attttttaag accattaact atatctttca aataagcact atctgttgct acttgtctaa
    13441 tacgtctgac taaattttct ttttctatcc aagtttcaat tctgttttta tcaactccaa
    13501 aaataaaact taacatatta atagaacttg ctagattaat ctctctgatt ttttgcttgc
    13561 aaaattccct tatacttgct tttgcttttc ctgttttaac actatctatc caagaacagc
    13621 gataaaattt atcattgcta gtaaccactc gcacaatatc gccattttta agctcggtta
    13681 acaaaggtac tttaatacga tttacataag cactttttgc atgaagccct actttggtat
    13741 gcacttcata agcaaaatca agaaccgttg caccacgagg caaagtgaaa atttctccct
    13801 taggagaata aactgcgaca tcttcaacat aaagactatc tttagcatat tcataaagct
    13861 caatagcatt ataatcttct gcattttcaa gattgtttat actttgcatt gaaatatctg
    13921 taagccaatc aagacgaggc gcaaccacgc tgccatcttc tttatatttc caatgcgctg
    13981 ctataccaaa ttccgcaatt ttatgcatat caaaagttcg aatttgtgcc tctataatac
    14041 ttttagcatc aaaaagtgtg gtatgtatag tttgataacc attttgttta ggcaaggcta
    14101 tataatcctt aaaacgcgaa accaagggat taaaatgtgt atgtaaaatt cccaaagcta
    14161 agtaacaatc acttactttt tcaaccaaaa ttcttacccc aagcaaatca agaacttctt
    14221 caataccaat gccttttctt tgcattttaa gataaataga atagctatgt ttaatgcgtt
    14281 tttgaatttc aaaactacct tgtctaaagc cattactcaa aaataaaagt tcgattttgg
    14341 aaataaattc atttaaacct aattgcattt cttgattatt ggaattgata taattgtcaa
    14401 taagcttata ctcatctggc ataagatatt taaaactaag atcttccaaa taatttttta
    14461 tgcttgaaat accaagtcta tgggctattg gggcatatac aactaaagtt tcttcgctga
    14521 ttcttttttg cttatcttct cttagaatat caagagtaag catattatgc agcctatcgc
    14581 ataacttcac aatcaaaacc ccaacatctt caatacttgc taaaagcata tttctgaaag
    14641 tcaaggctga tttagttaaa ctttttttag attttgatga aatgagatta tcttctctaa
    14701 tttctataat tttagtaagt cctaaaacaa gttttaaaac ctcagaacca aactgctctc
    14761 taagttcttc ttcagtgcag tttgtatctt caatcacatc atgcaataaa gcagctaaaa
    14821 tattgctttt attttcactt aaaaatccaa ccagtgttgc tactaaaata ggatgtaccg
    14881 cataaggctc tccacttttt ctaaactgcc cttcatggca aaatatacag taatctaccg
    14941 ctttttcaag aatggcatca tggccacaaa tttcgaaaag caaagcctta gcagcttcta
    15001 aatctttaca attttttaca ttatcgatta attgttcaag caataattct tcatcgattg
    15061 gtttcaacta aaccctctaa agtgatttta ttttctgcaa tttcatataa agctatatct
    15121 gcaagtttat ttttattttt atcaaagtct accaaagggg ttgctccatt tgccaattgt
    15181 tccgctcttt ttgctaccac taaagaaagg cgatatctat cattacccat tttttccaaa
    15241 gcttttgccg ctacttcttc tattctttta tccataattt tctccttaat tatttttaac
    15301 ggttgaacaa aggctagtat caccttgtat gattttaagt aaattaccct cttcaaacat
    15361 attacaaacc acaataggaa gtttgttatc tttagctaaa gctatagctg tatcatccat
    15421 cactttaata ttatcttgca tagcctcatc ataactcaaa gtatttaaaa atactgcatc
    15481 atcaaattgt tttggatctt tatcataaac tccattaact tttgtagctt ttattaccat
    15541 atctgcatca atttccacag ctcttaaaat agctgttgta tccgtagtaa aataagggtt
    15601 tccagtacct gcagcaaaaa ccacaacacg acccttttct aagtgtcttt gcgctcttct
    15661 cataatataa gtttcacaaa atgcttccat ctgaatggcg ctttgaaccc taacttcaag
    15721 tccagagctt tccaaagctt cttgtatagc aatagcattg ataaccgtag caagcatccc
    15781 catatgatct ccacttgtcc ttttaatcaa tccgccctta gcagcactta ctccgcgaat
    15841 aatattacca ccgcctataa ctatgcctac ttctatttga ttttttataa gttctttaat
    15901 ctctgaagct atgaatttta aaatagaatt ttctatacca aagccatttt cacctgctaa
    15961 agcctctcct gaaaatttta ctaaaactct ttttctctct tgcattattt ctccttattt
    16021 aacttgaaat tatattttaa attccattaa atttagctaa tttaagctaa tgagttccaa
    16081 aggattgata tgaaaatttt tttgagttac ttcaaaagta agatcatttt ttattctacc
    16141 cactacggca ccttttttaa tattcttacc aactttaata ttaggagcaa tcttatctaa
    16201 atgtgcgtat attgtatgta tgccattatc atgttcaaca ataacaactc gagctagcat
    16261 actagtatct ttagcaaaaa ctatttttcc atctagcaca tttttaacaa ctgcatcgct
    16321 tttattgctt cttaaaacta cattctcgtt aaaaatttta agattgtaaa caggatcaac
    16381 ataatttcca aatttttgct tcacagtaaa agaatccaat ggagctatgg ttttttttcc
    16441 tgtgtaacgc ttgactgaac ttccttgata gcttgaacct aattgtctta ttttttgatt
    16501 attttttact attttagtat catttttgtt tgaatttgca tcttctttat cattaataat
    16561 ttttaattga tttaatgttt ttctaagctc ttcttgctga gcttgtaaat catcgagttt
    16621 ttttgcatat atagctcgat ctgttttttg tttattaatt tcgctaattt gtttttgttt
    16681 taaactttga agcttggcta attgagcgtt gtaatcctta agactttcat tgattttctt
    16741 aatctgagct tgtttatcat caataagcct gcttactccc tcataatctt tagaaatttt
    16801 aaaaatttct tcatttaaaa ctttgtttaa acttcctaaa atttcaaaag ccataaaact
    16861 ttcttcactt tcaatatagc cttgagggat aggtaaatca taagcaaaat ctttagccat
    16921 taaagatata agcttacctt ccatatttga tttactttta agcaaatctt cattttggct
    16981 tgtaagggtg tttaactctt gattttgagc cttagcactt gcttcaagct tagaagtttg
    17041 tgaatttaag ctttcaattt gcaaacttag atctttcaaa cttttttcac catttaaaat
    17101 atcgctagcc aaatcttcaa gttttttatt taactgttct tgtatgcgtt tattttcttc
    17161 taaacttttt gttttttcat ttatagcgtt tgctaaactt atatcaacaa acaaaaaaaa
    17221 acaaaaaaag ataagaatat tttttctcat cttttaacct taaacataac cgtatttaca
    17281 cacaacaagc aaataaacaa agtagctaaa aaaattaaag tcaaatgtaa aataaaatta
    17341 ataggtggaa aaataatatc tacagccttt aaactttctt ggataataga aagatcaaaa
    17401 atttgggtaa aaaaggcaag taaaataaca aaagcaataa aacaatcaac cacaaccacc
    17461 ttataaagca taaaagatct aaaccaaaac ggagctccaa ataaacacat aatttcaata
    17521 cgatcggtat gttcataaag ccaaattctc atctgtttta aaaacaaaac aaaggcaagt
    17581 aaaataatga taaacaaaaa taaccaaaaa acaaatttca tcaaaataag caaagagtat
    17641 atcttatcat gggttttgga aaaagtttca accttactaa cacctacaat atttaaaagt
    17701 tgatttttaa tcgaatttag ttcattttga tcgggtaaag aatttaattt taaagtataa
    17761 aattttggca gagaatcttt taaaactttc aaattctttt cagaaacatc atttttcaaa
    17821 cgatcaatta aatccttagg atctaaagat tcaagtccag caaaaaatgg tacttttgtt
    17881 tttactacat tctgatcaag ttcagttttg ctgacaacta taatattata atctttatta
    17941 acaagttctt cataatgctt caaagttgca tttgtaatca aaataaattc aaaagcaaac
    18001 atcataaaaa gtaaaggtaa aattaaagat aaatgtgttt taaaaaattt cattcatttt
    18061 tccattttct atattaaaac gacgataatc cactcttaaa ttactaggaa ttctatgtgt
    18121 taccactata acacaagttc ctaaaagctc tctagcagac tttaaaagag tccatataat
    18181 atcagaagaa tactcgtcca aatttcccgt tggctcatcg caaagcaaaa gctttggatt
    18241 atgagctaaa gccctagcca tagcgacgcg ttgttgctca ccaccgctaa gttgattagg
    18301 caatttatct gctttaaaag ttaaatttac atgctttaaa agcttagtag cttgatcatg
    18361 gcatactttt ttgctataac ctttaatcat taaaggcaac ataacatttt tttcaacact
    18421 atattcttgt acaagtttat aatcttgaaa aataatccct attctttgac gtaattttaa
    18481 aagttctaaa tttccaattt tattcatcaa agatccacat acttcaagtt taccagaaat
    18541 aggttctaaa tctccataaa aagactttaa aagcgtactc ttaccactcc cacttttacc
    18601 cgtaataaaa acaaaatcat catccttaaa agcaaaactc gcttctttaa taactagttc
    18661 atcataacct aaagtaagtt tatttgcttg gattaaatta ggcatccttt ttccttaatt
    18721 tcccttttta aatttttaaa ttatgcttta tttttgctta attttcaaga aaaattatat
    18781 tttaaactga acttttaaaa tttcttttaa ttcatttatc gctttaatat tttcttgaat
    18841 tttaaatggc tctttaaaag caaaatcaat cgttttatca agatgcaaat aacaatgttc
    18901 aggcttatta aaagctccaa aagcaacctt taaaagcaaa ttctcatctt gtttatagat
    18961 gctttcaaaa tgcaagaaaa aatcatcttt ttttatagta atatttttaa agttctgctc
    19021 tatttttttc aaatcctctt tagaaaattc aaccgatgag agattaaatt catttaactc
    19081 atagttttta cactcttggt taaaattcca cacccaaaga tcatatatat ttttttcttg
    19141 ctttttccat ctatcttcat atttgcttga aatttctaaa ttttcatttt ttctaaggct
    19201 aaattttgga gcaggaaaag tcaaaaattg ctctaaagta aaattaaaat actcaaaact
    19261 atctgttcta agctcaaaac gaccattttg aactaaaacc ctagcacatt ctttgcaaaa
    19321 atctttccca ataactcgcc tatgaggctt tttatcccaa ggaacaggga aatgtaaaaa
    19381 aatcttttca actgattttg attttaatac actcaataac aatctcgcat cactttggat
    19441 tagcaaaata ttatttacat tttgtgcttt agcaagttta gccacttgag ttaaagctgg
    19501 gttgtaaatt tccaccccta aaattaaaac atttggattt tcttttgctt gataaagcaa
    19561 atgtcttcct gatccaaagc ctatttctat ataaatttta ccttgaagtc tagataaaag
    19621 ctcatcaaaa ttatcaacaa taaatggtgt tttttcaatt aaagcattat ttttaagtcc
    19681 aaaagcttca ttgataatat cctcacaaaa accttcttta aagattttta aagccttttg
    19741 caaataacct attttagaag gttttgtatg tttatcgcct ttaatcacaa aaccattttg
    19801 tgctttttta atctgcagaa aaaaactctc ttcttgaacc tttgtataaa taagactaac
    19861 attatcattc ttagcaagcc aaagaaattc aacatcatcc ttactataag gcagatttat
    19921 ttctttgatc tttttacttt taaaatttgg cactactgag ccgccttaac tttgcttgaa
    19981 ggttctgaac gaagcccggc tgaatcaata gcaataactt cataactata ttccacccct
    20041 ggcaaagctt ttacatcttt taatcgcttt tctttaatgc ctttaaaaac tgcattttgc
    20101 tccccgccat agcgtcttac ttcatactca acagctctag tatcattatc actccattct
    20161 aaatttatcc cttcgcttgc actttgagcc aaaataatac taggagccaa agggttgcct
    20221 aaagttttac cttctacacc atcttttggc ataggacttt caagaccatc tttatccacc
    20281 attgttactt tataatactt gcttttacct gctccttcta ctatatcctc ataagaattt
    20341 ttatcagtct ttgccaaaac actaaaagga aggaagcttg agctcgtaga ataaacttta
    20401 taataagaaa aatcttcata cgtaggagca tcccaagtta aaatgatttt actagaacca
    20461 tctgtgctag cacttaaatg ctcaacttga ggaggtaaag ccttgcttgt agaacttaca
    20521 acttgacttg acccactctt tatcccatta aaactcacag caataattct ataacttgaa
    20581 ttttcattag gctttaaatc actatcgatg tattcagcgt ttaaacgatt ttttacttct
    20641 gcaatttttt taaattcttt atcatcacct ttggttcttt caataatata agaatcaacc
    20701 ctaaaatcag gatgcggacg ccaaataagt ttaatacgat taggcaaatt agtcacagct
    20761 tgaacaaaag gaacagcttc aagtcttgga gctgtgctca cttctataac cttgccatct
    20821 tctgaaattt gtccttgctc attaaagctt ttcatcatat aacgatactt agtaccaggc
    20881 tctaatttag tatctacata atgagtttga aacttatctt taatagtgcc tacaagttta
    20941 aaatcaggat tttcatcact agaacgatac aaataaaatc ctttaatatt ttcattatat
    21001 aaaggctccc attcaaaagc aatattactc atatcactaa gactttttaa actttcaacc
    21061 tttggcaagc tttcatttac agcaggctct ttacttgaag ctagcgaatt catttgcgaa
    21121 acactacaag cgctaagcaa aagagttaaa aaactcaagt aaaaactcaa gcgaaatctt
    21181 ttcatcattc tctcctaaat taatttgttc aaacataata tttttaaaat cttccatcaa
    21241 aggtgcttta acaaaaattt gttctttggt ttttggatgg ataaaataca aaaaataagc
    21301 atgtaacatt atcctacaat catacttacc cttataacca tacaaactat cacctaaaat
    21361 atagcgattt aaactagcca aatgcgctct aatttgatga gttcttcctg taaaaagctt
    21421 agcagccatc aaagttaaat tttcagtttt tactacattt ataaaagctg attttgcgtt
    21481 tttactgaat ttattttcct tatctatggc tattttttta atagcattag aaggcgaacg
    21541 cattaaaaat ttttctacta taattttatc ttcttttagt ggcaaatcaa ttaacgcaag
    21601 gtaaattctt cccatgcttt tatctgcaag ctgttcactt aatttttgat gggtgaaatt
    21661 atttttcgct attagtatag ctccgcttgt atctttatct aatctatgga caagaccagc
    21721 tcttatctct cctcctaaat ttgataaagt atattttttt tctattaacc aatccaccaa
    21781 agtggcattt ttaacgctac ttgctccatg aacgactaaa tttgaaggtt tatttaaaac
    21841 aagcaagtct tcatcttcgt ataacacatc aatatcaaaa tccacttcaa actgaggttt
    21901 tatctcattg caaagcttta aacttgcaat agaaataata tcaccatttt taagcttaaa
    21961 tgaattttta tcttgaattt tatcattaac ctgtacacaa tctttttcta taagtaaagc
    22021 aacttgattg cgactttggt ttaatttttt agccaaaaat acatcaagcc ttgaattttc
    22081 atctactaaa aaagtttgca ttttttcctt agaggttttg ataaatttaa aattttagtt
    22141 tataattata gctttatatt accaactgaa ggcaaatttt gtttagatta gatagaagaa
    22201 ttttaactca ttttgactat atacaaccca ttttattttt acccataatt cttatttcat
    22261 ttttcttaat ctttgaagct aatccttttt tagcagaaaa acagtttgtt tatgcctgtg
    22321 tgggattgtt tgcttttatg gtttttttct tctttcccat aaggaaattt atttggatta
    22381 ttcctgttgc ttattggatt aatatttttt tattgctaag cgtagatatt tttggggttg
    22441 aaaaattagg tgctaaaaga tggcttgaaa ttccttttac tcactttact atacaacctt
    22501 ctgaaatttt taaacctagt tttattttaa tgcttgccta tcttatttat caaaatcctc
    22561 ctccaaaaaa tggatacaaa cttaaacaat tcatcaaact tagcttttac atcatcttgc
    22621 cttttttgct aattgcaaaa gaacctgatt taggaagtgc tatggtttta ctacttgttg
    22681 gttttggagt gctttttatc atgggagttc attataaaat ttggttaagt attgttatag
    22741 ctataagtgt tagctctcct attatttata cacatctttt aaaaccctac caaaagcaaa
    22801 gaattcatga ttttatttca gaaaaaccaa gttatcaagt agcccaatca atgatagcta
    22861 ttggaaatgg tggtttaacc ggaaaatctc aagatgaagc tacgcaaact cattttaaat
    22921 ttttacctat ttcaactagt gattttattt tcgcttacat gatagaaaga tttggattta
    22981 ttgggggatt gacattaatt atattttata ttttacttat ttttcatcta cttagtttaa
    23041 attataaact taaagatgat tattttgcta gagttgctat taattgtgtt gcattattta
    23101 tttttattta tgcggcagta aatatttcaa tgactatagg ttttgcacca gtagttggga
    23161 tccctttgcc tttttttagt tatggtggaa gttcttttac tatttttatg attttttttg
    23221 gaattttaca gcatttaatc acttttagat atttttggac ggatataaag gctaaataaa
    23281 atatttttaa gcattaataa gatataattt tatcttttaa ttcaacttag gcggatttat
    23341 agctcagttg gttagagcaa ccggctcata accggttggt cgcaggttcg agtcctgcta
    23401 aatccaccat tctacatata agctatagac tctttcttta aaaaataact tttagttctt
    23461 taaatatttc aatcttatat aaaaaaagta tgtgatgtga ttttttgaaa gataaagtgg
    23521 tggttagagg cagaatcgaa ctgccgacac gcagattttc agtctgctgc tctaccgact
    23581 gagctatcca accacaatgt ttgataaagt aaaaatgtaa ttgtatcttt ttttctttaa
    23641 tttaagttta aatacaaaaa taaaatttta tttcccttaa agttttaata agatagaata
    23701 cccgctttag atcattatca aatggaaatt ttttgaaaca atttggacta gatagacgaa
    23761 cttttaaaat tttactagct ggttatatta ttattgcatt gtttggggct ttattgctac
    23821 attcaagctg ggcacataca actcctattg attttttaga tgcctttttt acaagcacat
    23881 ctgctgttag tatgacagga ttagtagtta agaacactgc ggttgatttt accttagcag
    23941 gacaaattat tatcttagct ttggtgcaaa ttggaggctt gggatatatg ggtataggtt
    24001 tatttgttta tatactcata cgcaaaaaag ttggttttag tgcaagaaat ttactaaaag
    24061 agtctttatt ttatccatca atggatggtt tatttaaatt ttttaaaaag gttttgctgt
    24121 tcatttttac tatagaattg ataggtgcta tacttctcac catgcgtttt gcccttgaaa
    24181 tgaattttaa gaaagcttta tggtttggaa tttttcattc tattagcgct tttaataatt
    24241 ctggatttac tatatttgaa catggattta tagcttataa acatgatata gcaattaatc
    24301 ttattatcac ttctttgatt attattggag ggcttggata ttttgttttg gttgaattat
    24361 acttttttca aagaaaaaaa ttgcaaaatt taagcctaca tacaaaaatg gttgttgttg
    24421 caagtatttt tcttattttc tcttcaacgc ttattatttt tgcttttgaa tactcaaatc
    24481 ctcaaactat aggacatttt tcattttttg ataaaatttt aagctcatat tttatcgcta
    24541 ttaattaccg cacagcagga tttaatacct tagatatggg acatttgcat gatgcaagct
    24601 tattttttgg atcattgttt atggttattg gtggtgcacc aggtggaaca gctgggggta
    24661 tgaaagtaac aactgtaatg gttttattgc tctatgctta ttggagtatc cgcgatggaa
    24721 gagttagaat ttttggacat gaaattccaa gagaaactat atctaaagct tttattatag
    24781 ctgtaggttc agctgtttat atagtaatag ctgttatttt gctttccttg ctagagtcaa
    24841 aatttgattt tatagccttg ctttttgaaa cttcttcggc ttttgcaacc gtaggaattt
    24901 cagtaggaaa tggtggaact ttatctttat gcgctttgtt tagtgatcct agcaaggtga
    24961 ttatcatcat tatgatgcta agtggtagga taggtgtttt tgctttttta ctctcggtat
    25021 tcaaacaaga caaagctatt catttaaaat tccctgaagg aaaggttaat ttataaaggt
    25081 aaaatcgtga aaaatcttaa ttatggaatc ataggacttg gaaaatttgg atcagttgta
    25141 gcagatgaac tcattgctgg aggtcatact gttatcgttg cggataaaga tgaggaagct
    25201 ttaaaaagta tacaaaatcc tccaagctat gcttatattt tagattctac aaatatttca
    25261 gccctaaaag aagcaggctt tcatgatgtt gaagttgtta ttgttagcat aggagaaaat
    25321 gttgaaaaat caatccttac tcttatggcg cttaaagata taggtgttaa aaatatcatt
    25381 gctaaagcaa cctctaatat ccatggtcaa attctttcta agttaggtgc aacaaaggtt
    25441 atttatcctg aaaaagaaag tgctaaaaga ctagtaaaag aatttttaac taaagatgct
    25501 gattatgaag tttttgatct ttcagcaaat actatacgag ctattaagat caatatagat
    25561 gaaaaattag caggaaattc tttaaaacat gtagcacaaa atatgaaagt gatttcttat
    25621 aaaaaattaa atagtgactg ggaaatacta cctgatttag aaaccacgac agtttatagt
    25681 ggagatgttg taatactcct tggaacagtt aaagaactta gagaatttga acactaagca
    25741 agatttaaag ccttacaagc ctttacaaaa cgctttaagg ctgttttttc tttggtagaa
    25801 attttatgat atataacttc atctaaataa tatctaacat cttttatatc taaatccctt
    25861 gttttggcat aattttgcag tatataataa ggaattttaa tctttgtttt tggaaatttt
    25921 ttcaaaattt gtttatataa agcttttttt tgcacacaag aaaatctagc aaaaacaaaa
    25981 ggcaatcctg ttttttcgtg ccattttgca cataaatcga tatatttaga aggatctttt
    26041 agataaagct ttaaagcctt atcacctata attacttttc catcttgttt taatacttta
    26101 gccagagcgt ttgaagttgc tgaacttgga tctttggcat ttgatgtatt tttttctact
    26161 aatacactta aaactctttt attggcacaa atacccaaat ctaaattttt atattttttt
    26221 ctagcacttt ctatgcttga aatgatagct gcatcaattc ttctataaaa taaatcttta
    26281 tttagcttac ttggaactcc ttttttatac tccatacttg ctttataacc attaggtagg
    26341 ggatatttct taagatatat atgtaaaggt aaaagattaa tataatcaat ttttccaaaa
    26401 atcatctctt ttatagagtg ttaaacactc tatctcctgc atctccaagc cctgggataa
    26461 tataaccttt ttcatttaaa ccttcatcaa tacaagccac aaaaacttct acatcatcat
    26521 gcatttggct aaattttttc aaaccttgtg gagcagcaag tatggatata aattttattt
    26581 ttttaactcc ttggcttttt aaaaaattac aagcatctat agcagtccca cctgtagcaa
    26641 acataggatc tataacaata gcagtgcgtt tttttgcatc tttgggaagt ttttgaaaat
    26701 aaaaatccgc ctttaaagtt tcttcatttc tcacaaaccc caaaaaccca acacttgcat
    26761 caggaatcat cttaaaaaca ctttcaagca ttcctaatgc agctcttaaa ataggacaaa
    26821 tcataatttt ttcatcaagt ttttttactg tagttttttg tataggtgtt gaaatttcaa
    26881 tttcttttaa agaaaaatct ttactcgctt caaaaagcaa aaaagatgaa atttcatcga
    26941 ttaacatacg aaattgaaag ggctttgtct ctttagccct taaaattcct aatttatgtt
    27001 cgatcaatgg atgattgata caatgaatat ttttcatttt aagctttcaa aataagcttt
    27061 ctcatcaaaa tttttcacct tagctacacc atcttttacc gcagctgctg ctacagctgt
    27121 acttactgca gcttttactc tttcatcaaa aggttttggt ataacataat ctcttccaaa
    27181 ttctaaagtg cttaaattat aagctttttt aaccgcatcg cttacaggaa gttttgcaag
    27241 atctgctaat gctttagcag ccgctacttt catattttca gtgattttac ttgcacgcac
    27301 atctaaagcc ccacggaaaa taaaaggaaa acctaaaaca ttattgattt gatttggata
    27361 atcacttctt cctgttccta caatcgcatc ttttctaagt ctagctacat cttcaggcat
    27421 cacttcagga ataggatttg ccaaagcaaa aatcacagga tcttttgcca tgcttaaaac
    27481 catttcatca tcaagaattt ttggcgcact aagtcctagg aaaacatcag ctccttttaa
    27541 aacttctttt aaagtctttt ccttagaatc aacagcaaat tcaagctttt gaggagttaa
    27601 atcatttcta tctttagaaa tcactccttt gctatctact aaaataatat tttcaacccc
    27661 taaatttcta tacatcttag cacttgctat acctgcggca cctgcgccac ttacaaccac
    27721 cttaatgtct ttaaattttt taccgcttat ctccattgca ttcataagcc ctgcagttga
    27781 aataatagct gttccgtgct gatcatcgtg cattacagga attcctaaat cttgtaaagc
    27841 cgcttcgatt tcaaaacatt ttggagcagc tatatcttct aaatttatcc cgcccacagt
    27901 tggagccaaa gctttgcaaa aatttacaat ctcttccaca ctatgaacat caatttctat
    27961 atcataagca ttgacatttg caaatttttt aaacaaacaa gccttacctt ccataacagg
    28021 ttttgaagcc tgcgctccta tgtttccaag tcctaaaaca gcagaaccat cactaactat
    28081 agctactaaa ttagccttat ttgtataagt ataagcaagc tcattatctt tagcgatttc
    28141 aaggcaaggt tctgcaactc ctgggctata cgccaaagat agatcatggc ttgtagccat
    28201 tggcttactt ggtacaatat caattttccc acctaaatgg tattttaaag cttcttcttt
    28261 taaattcatt ttattttcct ctaactttta aaaaattttc tattcttttt ttgcactcat
    28321 caacctctaa aaattctaat acttcaaaaa tactaggact taccgcactc cctgttaaag
    28381 ctatgcgtat aggctgagcc aaatctttta actttgcttc ttttttttct aaaaaatcat
    28441 ttgtaaaatc ttcaaaatct ttacctgttt tttgatcttt aagtgtatta gcaaatgctt
    28501 ggagcaattc taaattattt ttgttaataa atttttgtac tgcattttca tcataatttt
    28561 gcggcgcatt aactatactt tttgcaccat tgataatatc atgcaaggtt tttgcacgct
    28621 ctcttaataa atcaagtaaa aatcctgcct tttcacaaac agataaatca aagccaagat
    28681 ccttaagctg acggttaatc tcttcaaaag gcaaagtttt aatataatga gcgttaagcc
    28741 attcaagctt tttagcatta taacaagatg cgcttttatt aatatgataa gggtcaaaaa
    28801 gttttttcaa atcttctaat gaaaaaacct catcatcacc atggctccaa cctaaacgca
    28861 caagaaaatt aagcaaagct tgaggtaaaa ttcccatttc tttgtattcc ataacatcag
    28921 ttgccccatg tctttttgaa agctttttac catcttctcc atgtatcata gccacatgaa
    28981 aaaatttagg aattttaaaa cccaatgcct cataaagcac aatttgttta ggagtatttg
    29041 aaagatgatc atctccgcga atcacatcac ttacccccat taaagcatcg tcaataacaa
    29101 cagtaaaatt ataagttgga gttccatcac ttcttgcaat gataaaatca tccattatat
    29161 cctctgcttt aaatctcacc tcgcctttaa ccccatcttc aaaaacaatc tcaccgcttt
    29221 gaggtgcttt aatacgcaca acaggctcta taccctgagg tggcgtgcct gtaaattctc
    29281 tatatcttcc atcatatctt gggcgctctt tggcagcttc ttgcttggcg cgcaattctt
    29341 ctaattcttc tttactcata taacaataat acgctttacc ttcatctaaa agctttttaa
    29401 catattcttt ataaagatca aaacgctctg attggtaagt tacttctcca tcatgttcta
    29461 aaccgcacca tttaaaagct tcgataattg ctttagtagc ttctttggaa tttcttttta
    29521 aatccgtatc ttcgatacga agtaaaaaat ttccaccatt ttttctagcg tataaataat
    29581 tataaagagc tgttctaagt ccacctatgt gcaaataccc tgttgggctt ggagcaaaac
    29641 gcgttgtaag tttttcgtgc attttttgcc ttttcttaaa tttttattga tataatgcga
    29701 tatttatact taaacaaagg tttgaaatga aaaaaatttt attaagtttt gcattttttg
    29761 caagtttagc tagtgcaaat accattaatg ctatagctgt agttgtagat aaagagccta
    29821 tcacaactta tgatatagat caaactatga aagcacttaa aattgataga aataaagctt
    29881 taggcgtact catcaatgaa aaaatggaaa tttcacaaat gaaacaacta ggtattgtag
    29941 tcaatgatct agagcttgat gatgctataa ataaaatgct tgctcaaaac aaaacgactt
    30001 taaatgcttt caaagcaaat ttaaaatcca aaaatcaaag ctatgaacaa tttcgtgcaa
    30061 attttaaaaa agatttagaa aaaagaaagc tttatgaaaa aatcgcaagt atggcaaaaa
    30121 ctgattttag tgatgatgga gcaaaaaaat ttttcgaaca aaataaagat aaattcactt
    30181 tttatacaca aattaatgca aatatttatc tatcaaacaa tcctcaaact ttagaaaata
    30241 tcaaaaatac aaaaaaaaca atccttaaac cacaaaatgc atctttaaac acaagtaatg
    30301 ccgatccaag acttttaggg cttttatcac aaattcctgt tggaggcttt tcccctgttt
    30361 taaatggaaa aaatggctat gaactctatg aagttaaaag caaagatggg gcacaaactc
    30421 ctgaatatga acaagttaaa aatgaagttt taaacgctta tgtaagcgaa caaagacaaa
    30481 atttcataca ggattatttt gataaactcc gctctaaaat caatatagaa tatttaagat
    30541 aaaaattaca attaaaattt ccctttaata gggaaatttt aatgtcttgc aagataattt
    30601 gtatcgtagt tattattaat aaaatcagga ttttccatca tagaaagatg aaaatctttg
    30661 gttgttttta tcccacttat aagcaactca tctaaagcta ctttcatttt tgcaatagct
    30721 ttattacgat cttctgccca aactacaagt ttgcctatca tagaatcata ataaggaggc
    30781 acgctatagt cttgataaca atgactttcc attctgacat tgcgtcctgc gggtggaatg
    30841 tatttagtaa tcttacctgg acttggcaag aaagttttgg aatcttcagc tgtgattcta
    30901 cattctatag aatgcccatt taatttaata ctttcttgag atggtaaagc ataaccttct
    30961 gctactttaa tcatttgttc tatgatatca atctcactta ccatttcact tacacagtgt
    31021 tcaacttgca aacgcgtatt catttctata aaataaaaat ccaaattttt atctaccaaa
    31081 aactcaaaag ttcccgcacc ttcatatcct atagctttag ctgccttaat agcagtttca
    31141 tgaagtctag tgcgtgtttt ttcatcaagc aaaatcgcag gggattcttc tataagtttt
    31201 tgatggcgtc tttgcataga acaatctctt tcgcccacat gaatcacatt gccaaaacta
    31261 tctcctataa cctgcacttc tatatggcgt ggattttgta tgtatttttc catatacata
    31321 gttccatcgc caaatgctgt catagcctcg ctttcagccg accaatacgc tttttcaaga
    31381 tctttttcat tttcaaccac acgcatacca cgaccaccac cacctgcagc tgcttttaaa
    31441 atcacaggat aacctatttc tttggcaagt tttttagctg cttcagctcc tgccaaagcc
    31501 ccatcgcttc ctgggatcac aggtacgcct gctctttgca tgacttgttt tgcttttgat
    31561 ttatcactca ttaaattcat agcttccaca gaaggaccta taaatttgat gttatgttta
    31621 gcacaaattt caacaaaatt ttgattttca cttaaaaatc cgtatcctgg aaaaatcgca
    31681 tctgcttcag caatttcagc tgctgtaata atagctggga tatttaaata gctttcagaa
    31741 cttcttgctt tgcctataca aatgcttgca tcagcgtatt ttaaatacaa agcatcttta
    31801 tctgcttcag aatacacaca aattgctttt ttacccattt ctttaatcgt tcttaaagca
    31861 cgcagtgcta tttctccacg attagcaatt aatatgcttt taatttccat tttataattt
    31921 ctccaccgca aataaaggca ttccaaattc tacaggctga ccatcagcaa ctaaaatttc
    31981 agcgatccta caatcaaatt ccgcttcaat ttcattcatg attttcatcg cttcgataat
    32041 agctatagta tcgccttttt taaccgtact acctactttt acaaaaggtg ctgcacctgg
    32101 acttggagct tgatagaaag ttcctaccat agggctgttt atacttggtt tgtttgattt
    32161 tacactttga ctaggttgag cttcgtttac aacgcttaca ttgataggtt gtggagctgg
    32221 aactggagga caaacaggag ctggaacatc gcagcacata tctctttcaa gttctatttc
    32281 aaaaccatct tgttctttga tcttaatttt actaatattt gcttcagcaa aaaggttgac
    32341 taactcttta atttcttctt ttgtcataaa attctcctac aaaatttaag aacttaacct
    32401 tatattatat aaaaaaactt gaaatttaac tttaaaaaag aaaaaaatca taaaaaatat
    32461 agatttttta ggttataatc cttacaaaaa attacaaata ttaaaaaggt taaaaatggg
    32521 cttaaaagcg gataattgga taagaaaaat ggcattagaa cacaagatga tcgaaccatt
    32581 ttgcgaagca aatataggaa aaggtgtggt aagctatgga ctttcaagct atggttatga
    32641 tatacgtgta gggcgtgagt ttaaaatttt taccaatgtt aattcaactg tagtggatcc
    32701 aaaaaatttc gtagaagaaa atgtagtaga ttttgaaggc gatgtatgta tagttcctgc
    32761 aaattctttt gccctagcca gaactataga gtattttaaa atgcctgata atgtcttagc
    32821 tatttgtctt ggcaaaagca cttatgcaag atgtggcatc atcgtcaatg ttaccccttt
    32881 tgaaccaggt tttgaaggac atatcactat agaaatttca aatactacgc ctttacctgc
    32941 aaaaatttat gccaatgaag gtatagcgca agtgttgttt ttgcaaggcg atgaaaaatg
    33001 tgacaccact tataaagata aaaaaggcaa gtatcaagcc caaactggca taaccttgcc
    33061 aagaatttta aaataggaac acttattgct ttaattttaa aaaaaactta agcaaaggaa
    33121 ggcaaaatgt ttaacaaaaa aaatatctta atcacgggcg gaacaggctc gtttggaaaa
    33181 acttatacta aggttttgct agaaaactat aaacctaata agattatcat ttattctcgt
    33241 gatgagctca aacaatttga aatggcaagc gtttttaatg ctccttgtat gcgttatttc
    33301 ataggagatg taagagataa agagcgttta agtgctgcta tgcgtgatgt ggattttgtt
    33361 atacatgctg ctgcaatgaa gcatgtgcct attgctgaat ataaccctat ggaatgtata
    33421 aaaacaaaca tacacggtgc gcaaaatgtc atcgacgctt gttttgaaaa tggggttaaa
    33481 aaatgtatcg ctcttagcac agacaaggct tgcaatcctg taaatttata cggtgcaacc
    33541 aaacttgcaa gcgataagct ttttgtcgct gcaaacaata tagcaggcaa caaacaaaca
    33601 cgctttggtg ttacaagata tggcaatgtt gtaggttcaa gaggatcagt agtgcctttc
    33661 tttaaaaaac tcatcaacga aggagctaaa gaacttccta tcactgatac aagaatgact
    33721 cgtttttgga tcagccttga agatggagtg aaatttgtgc tgagtaattt tgaaagaatg
    33781 cacggaggag aaattttcat ccctaaaatt ccttcgatga aaatcaccga tctagcccat
    33841 gctttagctc ctaatttaag ccataaaatc ataggcataa gagcaggaga aaaactgcat
    33901 gaaatcatga tttcaagcga tgatagtcat ttaacctatg aatttgaaaa ctactatgct
    33961 ataagcccga gtattaaatt tgtagataaa gataatgact ttagtatcaa tgccctaggc
    34021 gaaaaaggac aaaaggtaaa agatggtttt tcttacagct cggataataa tcctttatgg
    34081 gcaagcgaaa aagaactttt agaaatcatc aatcatactg aaggttttta aaatgcttac
    34141 ttattctcat caaaacatcg atcaaagcga tatagatacg cttacaaaag ctttaaaaga
    34201 tgaaatttta acagggggta aaaaggtaaa tgaatttgaa gaagcccttt gtgaatatat
    34261 gggcgtaaaa cacgcttgtg tattaaactc agccacttca gcccttcatc ttgcctacac
    34321 agcactaggc gtccaagaaa aaatcgtttt aactacccct ttaacctttg ccgctacagc
    34381 taatgcggcc ttaatggctg gagctaaggt agagtttatc gacattaaaa acgatggcaa
    34441 tattgatgaa aaaaaactag aagcaagact tttaaaagag agtgaaaata taggagctat
    34501 tagcgtggta gattttgcgg gcaatagcgt tgaaatggat gaaatttcaa accttactaa
    34561 aaaatacaat atccctttaa tcgatgatgc aagccatgct ttaggtgctt tgtataaaag
    34621 tgaaaaagta ggaaaaaaag ccgatctttc tatattttct tttcaccctg ttaagcctat
    34681 cactactttt gaaggtgggg ctgtggtgag tgataatgaa gagcttatcg ataaaatcaa
    34741 gcttttaaga agccatggta ttgttaaaaa aaggctttgg gatagcgata tggtagaact
    34801 tggctataat taccgcttaa gtgatgttgc ttgtgcttta gggataaacc agcttaaaaa
    34861 actcgatcac aatcttgaaa aacgcgaaga aatcgcaaat ttttacgata aagaatttga
    34921 aaaaaatcct tatttttcca cgataaaaat caaagactat aaaaaaagtt caagacattt
    34981 atatcctatt ttgctttttc ctgaatttta ttgtcaaaaa gaagaacttt ttgaaagctt
    35041 acttcatgca ggaattggcg tacaggtaca ttataaacca acttatgagt ttagttttta
    35101 taaaaaactc ttgggggaaa tcaaactcca aaatgcagat aatttttaca aagctgaact
    35161 tagtatacct tgtcatcaag aaatgaatct aaaagatgca aaatttgtca aagatacttt
    35221 atttagcatt cttgaaaaag ttaaaaaggg atattgtgga taagctagac tttagaagcc
    35281 aagattttag ccaaactgga aaggctatgt atgaactagc ttgtgaactt tttcctatcc
    35341 ctaggagtat cacagggcaa ggttttagag atagcttaga aattttaaat aaaactctgg
    35401 gggggggtat actcaaattt cactctataa aaagtggcac aaaggttttt gactggatag
    35461 tccctgatga atggaatgtt aaagaagcct atatcatcac tccaaaagga gaaaaaattt
    35521 gtgattttaa aaagcataac ttgcaccttc taaactatag cgaagccatc gatcaagaaa
    35581 tcgaactaga agaacttcaa gatcatcttt actccataga agaaatgccc gatgctattc
    35641 cttatgtaac gagttattat aaaaggcgtt ggggattttg tctcacgcac aacgaaagaa
    35701 aaaaactcaa aaaaggcaaa tacaaagtct atatcgatgc aaaacacgat gaaaatggag
    35761 ttttagatta tgctgatttt atcctaccta gtacgcaaaa ctcaaaagat gaaattttaa
    35821 tttcaaccta tctttgccac ccttccatgg caaataatga gcttagtggc cctgtagtga
    35881 gtattttctt agcaaaatgg cttttgggtt taaaagaaag aagatataat taccgctttg
    35941 tcatcatccc tgaaaccata ggctctatag tctatcttag caaacattta gagtgtttaa
    36001 aaaaacatgt taaagcaggc tttgtgcttt cttgcttagg cgatgatcat acttactcac
    36061 tcatacacac agttaaagag aacactctaa gcgataaagt cgccctgcat acgctcaaaa
    36121 ataaagaaaa tttcaaagct tttagttttt tagatcgtgg aagtgatgaa agacaataca
    36181 atgccccact tgtaaatctt ggcatagtag gggtatgtcg cacaaggtat ggtgactatg
    36241 atggatatca taactcaaaa gatgatctca attttatctc tgaaaaaggt ttaatgggtg
    36301 gacttcaaag catgcaagaa atgattttaa atctagaaat caacgccgta tatgaaaaca
    36361 ccatagtatg cgaacccaat cttggcaaaa gaggattata tcacaccctt agcactacca
    36421 atgacattcc tttggcttgt aattttttgg cttattgcga tggagagaat gatatcatcg
    36481 atatagccaa tatcttaaat atgcaagctt atgaatttaa agaacttttg gaaaaaataa
    36541 aattttatgg actggtaaaa tgaaatattt tttagaacac aatggcaaaa aatactccga
    36601 taaggattta atagatgctt tttatcaact aggtataaaa aggggtgata ttttatgcgt
    36661 acatacagaa cttatgaaat ttggcaaagc tttgcttact aaaaatgatt ttttaaaaac
    36721 cttacttgaa tgctttttta aagtgctagg caaggaaggc actcttctaa tgccaacctt
    36781 tacttatagt ttttgcaaaa atgaagttta tgataaagtg cattctaaag gcaaagtggg
    36841 agtgctgaat gaatttttta gaactagcgg gcggggggtt aggcgaacta gcgaccctat
    36901 tttttccttt gctgtgaagg gtgctaaagc ggatattttt ttaaaagaaa actcaagctg
    36961 ttttggaaag gatagtgtat atgaaatttt aactagggaa ggtgggaaat ttatgctttt
    37021 aggcttgaat tatggacacg ccctaacgca ttatgctgaa gagagaaata ccagcttttg
    37081 caggtatttt aaggaattta agggctttgt gattgacgag ctaggacaaa aaagagaaaa
    37141 aaggataaat tattatgtaa gagacttgga aaaagctatg tatgcagcct tgataagata
    37201 aatgaaatcg tgcggcaaac aaggtattac aaaagcataa aatttgcagg agattttcta
    37261 gaaagctatg atgctaaaga atatgtcaaa gccataggca acgcccttaa gcaggataaa
    37321 tttgccatat atgaaaagct tcttttatga aaaacattta aaggtagttt atgaaatatt
    37381 tacttgaatt tgaaaataaa aaatactcca cttacgactt catagaaact ttttacaaac
    37441 taggactaca aaaaggcgat accttgtgtg tgcatactga actttttaat ttcggttttc
    37501 ccttgctttc tagaaatgaa tttttacaga ctatattaga ttgttttttt gaagttatag
    37561 gcaaagaagg cactttgatc atgccaacct ttacttatag tttttgcaaa aatgaagttt
    37621 atgacaaaat aaattccaaa acaaaaatgg gagcattaaa tgaatatttt cgcaaacaaa
    37681 caggagtaaa acgcacaaac gatcctatat tttcttttgc tataaaagga gcaaaagaag
    37741 aattattttt aaaagataca acaagttgtt ttggggaaaa ttgtgtttat gaggttttaa
    37801 ccaaagagaa tggaaaatat atgacatttg gaggccaagg acacacacta acacattatg
    37861 cagaagaaca atttaatgta ttttacagat atcataaaat tttctctgga attttaattg
    37921 atgaaaacaa tatatcatac aataaaacca ttagttatta tgttagaaaa cttgacatat
    37981 cttctgagcc caatttaatt aacattatca atattgttaa taatactaaa aattttaaaa
    38041 aaaacaattt tgcaggagat catataaata tttacaacgc taaagaatat atagaaattt
    38101 tatggaaaaa attagatata aaccaaacaa ttctaataga aaattatgat acaatatatt
    38161 aattttcaac attctcaaga aagtggtata caatggaaaa acaattttat gaaattttag
    38221 aaaatatact tgaaaccaaa gtagatgaaa atacaaattt aagcatggaa aactgcaaga
    38281 actggacttc tttagctcat attgatatca tcatgagttt agaagaagaa tttgaaatca
    38341 aatttaacaa agaagattta agtctcttaa aatctcaaag cactttacta gaaaaaattc
    38401 aaaccctaaa ggcagaaaaa tgaaagaaaa tattgaaaaa ttatttcaag ccatcgctca
    38461 aaaaaatcct atccattcta aatatcttaa aaaaattgaa tttccacaag aagacgaaga
    38521 agaatttgat aaattaattt cttattatat tcaagatggt atcagtataa aagaacaatg
    38581 cgattgttat ttattgatcc ttaacgatac tttagaagaa acaaaatttt tcatagaaaa
    38641 tggggcttat cgttattcta gctttgatga agttaaggat aaagtttatt ttaatgaaag
    38701 ttatatgaaa caatacatga taggcctagc tctttcttct tttgtttgga tagctcatat
    38761 taaagtgaga aagtattttt cgcaatattt aaaaaatttt actccaaaaa caacttattt
    38821 tgaaataggc cctggccatg gagaatattt tgcaagagca gttaaaagtg gtaaattttc
    38881 cgccttttat ggacttgata tctctccaac aagttgcgaa cttactcaaa aaatggtaaa
    38941 acaacaagta gggggattga ttacaaaatg tgatttttta tgtcaagatt tttttattta
    39001 tgattttgat aaaaaagctg atttgatagt gattggagaa gtgctagaac acgtagaaaa
    39061 acctcttgaa ttccttaaaa gatctaaaga gcttcttagc gatggagggg aaatttttgc
    39121 aactatccct atcaatgctc ctgctattga tcatatttat ttattttccc atcctgatga
    39181 agttaaagat ttgatagaaa aatcaggctt aaaatttaaa gcttatgaat gttttatggc
    39241 aaatgattat agtttggaaa aagcattgaa atttaaaaat gctatcacta tggcagtagt
    39301 tttaaatgct taatacaaca ctcaatttac cccttcatca tataggcgtg gcttgtaaaa
    39361 atttagaaaa agaaagggaa tgttttttta aactaggttt ttataaagaa tcagaattta
    39421 tagatgaaaa acaaggggta agaggcgaat ttatcattcc ttgtaatgaa gcatttccac
    39481 agtatagatt tgaacttttg caaaatttaa acgataaagg accactagat agctatttga
    39541 aaaataatac caaaatgtat catttagcct atgaaagtaa aaatatcgcc caagatttaa
    39601 ttcttttgga acaacaagga ggcatttgta ttgttcctat tatgcaagca agctattttg
    39661 ctaaactttg ttttatcatg atgccaaata ggcttttaat cgaacttgtg gagctaaaat
    39721 gaatcttttt tcaccccatt taaaacgcaa tgagcttata aaattcgcca aagaattaga
    39781 ctttagcaaa agtcaagatc ttcttattaa tgtccataga aatcatgctt ttgaaggagt
    39841 gcaaagcatc attgctcctt ttttacattt tgctaattta agagctgagt ttaatttcag
    39901 ctcttatgat gatagcttga gttttgataa ctttaaagaa gctagtttag aacttttatg
    39961 gctagattta acccgctata aaaataatgt gcaaaatttt atagaagaaa gacttttaga
    40021 actaagaaaa atttcacaaa accctatttt agttcttagt ttaggagaat ttaaaacaga
    40081 taaaaaaatt ttaaattgtg aaatttttaa catagaaaaa ctcataaaag agtattttga
    40141 tgaagaagat attttagact tagctaaaga agaacttaca ggctctaagc ttaataataa
    40201 agccttgatt ttcttagcgc aaattttagg actcagtctc atccctgcac tcgtaaaacc
    40261 cgctcttaaa gctcttgtac ttgatcttga taataccttg tatcaaggaa ttttaggtga
    40321 agagggtata gataatctta atttaagtcc tttgcacaaa accttacaag aaaaaattaa
    40381 aacttttaaa aaacaagggt ttttacttgc cctagcttca aaaaatgaag aaaaagacgc
    40441 aaaaaaactt tttgaaataa ggaaagattt catcttacaa tgggatgatt ttgatgctag
    40501 aatgattaat tgggagccaa agggtgaaaa tatcttaaaa attgctaaaa aatttaatat
    40561 aaatactaac gctatgcttt ttatagatga taatatcgcc gagcttgaaa ataccaaatt
    40621 tacaggcatt aaaacacttt tatgcgatga aaatatactt tataaaatca aactttttcc
    40681 taatctttta aaactttcaa ataccaaaga agatcaaatt cgtgccaaag atatagcagc
    40741 caatgcttta agagaagagc ttaaaagctt aagcgatgaa gaatattttc aaaatcttga
    40801 aatcagctta aattttagca aaaatgatct gcaaaatatc cctcgcatta gcgaactttt
    40861 aggcaaaacc aatcaattta tcgctaatta cacacgctta aatcaagaaa aagtcgcaca
    40921 acacatgcaa aaagaactca ttgtaagtgt gagcatgagt gataaattaa gcgatagtgg
    40981 gattatcgct atttttgttt tttcttgcaa agaaggaaat ttatttatcg atgatctttg
    41041 catttcttgt agggctttag gtagaaaact tgaaactaga atgtttttta aagcctttga
    41101 actagcttta catttctttg atcttaaaaa caataatgca aggctttact atcaaaaagg
    41161 cgaaagaaat atgccatttt taagcttttt agaacaaatt tctaaaaaaa ttgaaaaaaa
    41221 ctcagccctt gtttcatttc aaaatttaaa ttttaaagga cttataatcc atgaaaacta
    41281 gatttgataa agctaaaatt tcaggcattt gcgtaagcgt acctgaacat aaaatttgca
    41341 ttgatgatga gttagaaagc gttttttcaa acgatatcaa aacccttaaa agaatgaaaa
    41401 aagtcatagg tttaaacacg cgttatattt gcaatgaaaa cacttgtgta agcgatcttg
    41461 gaaaacacgc agccaataca cttttgcaag gtttaaatat agataaaaat agccttgatg
    41521 cactcatcgt agtaactcaa agtcctgatt ttttcatgcc ttctacggct tgttatttac
    41581 accaactttt aaatttaagc tctaaaacca tagcttttga tttaggacaa gcttgtgcag
    41641 ggtatttata cggcttattt gtcgctcatt ctttaataca aagtggctta ggtaaaattt
    41701 tgctcgtttg tggggatact ttaagcaaat tcatccatcc taaaaatatg aatttagctc
    41761 caatttttgg cgatggagta agtgcaactt tgattgaaaa aacggatttt aatgaagcct
    41821 tttttgaact tggaagcgat ggaagacatt ttgataaact catcattcca aaaggtgcga
    41881 tgagaatacc taaagcagat atttttaacg atgattcgct catgcaaact gaggagttta
    41941 gacaattaga aaatctttac atggacggag caaatatttt caatatggct ttggaatgcg
    42001 aacctaaaag ctttaaagaa attttagaat tttctaaagt agatgaaaaa gacattgctt
    42061 ttcatctttt tcatcaatcc aatgcgtatt tggttgattg tattaaagaa gaattaaaac
    42121 ttaatgatga taaagttcct aattttatca tggaaaaata cgctaattta agtgcttgtt
    42181 cgctacctgc cctactttgc gaactagata ctccaaaaga atttaaagcg agtttgagtg
    42241 cttttggcgc agggcttagc tggggaagtg cggtgctaaa tttcaaggat ttatacacaa
    42301 aagatatttt aatttacaca aaggagaaat aatgacaaaa actgaatttt tagaagagct
    42361 taaagaagct atgcatagag atgaagactt aaatgaagat atgctacttg atgatataga
    42421 cgagtgggat agtttggctt ttgtatctgt gatggtgctt tataaaaatc tttttgcttt
    42481 aaaaatcaca gccgaggact tgaaaaattg tcaaaaagtg agtgatttaa tcgatttagc
    42541 aaagcttgat taaaaccttt aaggttttaa tcttttatcg ctaattcaaa tttgtcaccc
    42601 acatctttaa aagtaaacac tttatttcca caaggataag agatggaatt ttcttgcatg
    42661 aaagattttc ttttttgtag tttttcaagc attaaaggaa gttcttttct aaataaggct
    42721 ttatcagtaa tcctcatacc atgatttaaa tcttttataa atcttccatc aatctcactt
    42781 tcgtctttta ttaaatgtaa agtggcgtca tatcctagct ctttatacgc taaaaaaaga
    42841 gtttgtttat cttttgctgt attaaatgga tcttttaaac tatgataaga tactaaaata
    42901 atatttttat tgacactagc ttgtatagtt aaatgagcta aattaggaat tattctaatt
    42961 aaataattct cggcatgaaa aaaatatttt gaattaacat cagcattcca atgagtttta
    43021 ataaaaaatc ctattttatt atgtggatat tcctcaaaat aatcatattg tccactttct
    43081 ctttctaaaa taaacatagg agaaggcaaa gccgaacccg aattatcaat cacaccatcc
    43141 acataccaag gagctatctt tgctatgagt aaagataggt atcctccata agaccccccc
    43201 ccataaattt ttggtaaatc tgcaaattct ggaaaacgtt taactaaatc ttttaaagca
    43261 ttgatatgat caatagctgc cataatgcca tagttttgat aatctccatt gggtgggata
    43321 aaagttgaag taaaatttaa cttaaagtta tgatcgagtt tattttgcat ttttaaattt
    43381 tctacatgtt tcactaaaga attcgctaaa aaaagcgcat tatcattatt tatttcacta
    43441 taaaaaaaat gaaactgatt taataaattt ttaatatttt caatatcttc ctcttgaaaa
    43501 tatttgtatg cactatattt ctcaacattt gatcttctat ggcaaaaaca atgataaaaa
    43561 acatgcaccg ctacaacgtt aaaattttta gcaatatatt ccctatcaaa atctaaaaaa
    43621 gaaatatttg cattagctcc ataacctcct atgacaaaaa ctatagcttt gagatctttt
    43681 tcatcatcat agctaatgcg gtattcaagc ttactagttc ttttaatact tagttctata
    43741 tcatcacaag aatcgatttc aaaggtttgg tttatgagca tatattttcc tttttaatta
    43801 atgatcaatt ttaactgatt ttctacatct ttaaaagtaa acactttatt tccacaagga
    43861 taagagatgg aattttcttg catgaaagat tttcttcctt gtagtttttc aagcattaaa
    43921 ggaagttctt ttctaaataa ggctttatca ggtataccac aaccatgatc taaattttta
    43981 ataaattttc catcaatttt attttcatct atcaaattta agcttacatc gtaacctaaa
    44041 atttttaata tttgcatggt tagttcttta aaatttgctg gagttaaagg atcttcttta
    44101 ctatgataac tcacataaat aatattttta tttttttgac tttgcaaaat caaatgatcc
    44161 ttatttaaca atgttctaat aaaataattt tcattattaa aaaaataagg tgaattttct
    44221 ttacgcgtcc agtgggtttt tagaaaacaa ctcacaaaaa aatgatcgcc ctgcatatac
    44281 atatccccat tagtatcttt gcttttaaat tccaactctc taccaataat ataattaagc
    44341 ggtggaacag ccgaacccga attatcaatc acgccatcca cataccaagg agctattttt
    44401 gctatgagca aggctaagta tcctccataa gacccccccc ccataaattt ttggtaaatc
    44461 tgcaagtttt ggaaagcgtt taactagatc ttttaaagca ttgatatgat caatagctgc
    44521 cataatgcca aaattttgat attctccacg cgaaggaata aaagttgcac ttagtctttc
    44581 ttcaaaatca taaggcaatc gatttaacat ttttaattct gtcataatct cgctcaaata
    44641 ttcacaatga ctaactacag tattattggc taattgatca catggaatat tgtatttacg
    44701 aagcactttt tctattaatt ttaaatcatc ttttgtaaaa tctgctaatg ttgaatactt
    44761 ttcaacatcc gaacgccttt gacaaaaaca atgataaaaa acatgcactg ctacaacatc
    44821 aaaattttta gcaatataat ttctataaga gtctaaaaaa tatatatttg cattggctcc
    44881 ataacctcct attataaaaa ctatagcttt aatctctttt tcatcatcat aacttatacg
    44941 gtattcaagt ttgctagttc tttttatatt taattctaca tcatcacaag aatcgatttc
    45001 aaagctttgg tttatgagca tataaaggcc ttttttatta atttatcgat attatattac
    45061 aaaaaattaa aaaggtaaat catgacaact catatctatg attttttaga aaaaagttta
    45121 atcaaattta gcgaaaaaac tgcttttgta gaaccctttg tcaaagaaag aaaggaaatc
    45181 acttacaaag actttgatct cttttctaaa aaactagcca gtgaaatttt aaaaacttta
    45241 ggaaatgata atcctactca agctcctgtt ttaatcatct tgcctaaagg gattgattgt
    45301 ttgatttcat tttttggagt ggcactcagt ggaaattttt atacactttt agatgaaaaa
    45361 agtcctaaag aaagagtaga aaaagtcata gaagttttaa agcctaaact ttttatcact
    45421 tcaaaggact taaattttaa cttagattta cctacgcttt atacacaaga ctttgaaagt
    45481 tttaatatag atgagagttt aataaagcat gccaaagaaa aacatataga tactaattta
    45541 ctctatgttt tctttacaag tgggagcaca ggcattccta aaggagtaag catagctcat
    45601 aagagtgtga ttgattatac tttttgggtg tgtgagactt ttaaatttga tgagaatgaa
    45661 attttagcca atcaagcgcc attttatttt gacaatagca ttttagatat tttttcaagt
    45721 gtaaaatcag gagcgacttt acacctttta cctaatcatc tttttgcctt tccaaataaa
    45781 attttagaat gccttgaaaa agaaaaagta agcactatat tttgggtacc ttcggtgctg
    45841 atttattttg caaatactga agctttgaat aattttagtt taaacgcctt aaaaaagatg
    45901 cttttttgtg gtgaaatcat gcccaataaa cagctcaata tttggcgtaa acacttaccc
    45961 aatgccttat ttgccaacct ttatggccca acagaaatca ctgatgtatg ttctttttat
    46021 atcatcaatc gcacttttaa agatgaagaa cttttaccga taggaaaagc gtgcaaaaac
    46081 acagaacttt tagtttttga tgaaaatatg aatttcataa gtcctaaaca aataggtgtt
    46141 aaaggggagc ttttcgtgcg tggaacttct ttgtctttag ggtattataa tgacaaagaa
    46201 aaaaccaaac aagcttttat tcaaaatcct ttacatgata attatttaga tttactctat
    46261 aaaacaggag atatcgtttc ttataatgaa tttggagagc ttttatgcta cggaagagca
    46321 gataatcaga taaaatatat gggacataga atagaacttg gagaaataga aagcgtgata
    46381 aattctcatg tgaatattaa aaacagtgct tgtattttta aagaagatat tatttgtttt
    46441 tatgaaagtg aagaagaaat taattttaaa gattttttga aagataaatt accttcttat
    46501 atgatcccaa aaaattttat taaactcgac aaatttaagc ttaatcaaaa tggtaaaatt
    46561 gatagaaagg ttttaaaaga acttgtttaa ataaatattt tataatttca aaaaactaaa
    46621 ggagaaaaaa tgcaagaaat caaacaattt tttatcaata tagaaagaac agatatcaat
    46681 gagagtatgg aaaatctagt aagtgaagat tttatcgata gtatcgatat catggctttg
    46741 gttgccgaaa tagaaaaatt ttataaaaaa cccttaaaag cagaatttat cacacctgaa
    46801 aattttgaaa gctttgaaaa tatcaaaaaa atgcttgaaa ctgcaatgaa agactaatct
    46861 ttccttgcaa gttcaagctg ttcttttaaa gaactgatga tttcattttt agaaacaata
    46921 atttgtgcta taaaatccgc cacatcatcc caatctttac ttagcatatg ggttaaagta
    46981 taattttgtt catattcttc ccaattcaca ggagtaaaaa gagaattttt atgcgggaaa
    47041 tatttgtttt ttacccattc aagtgaagaa gcaaaataat ccacataagc tttagcaata
    47101 tctttttgca ctgcaaattt taatcttttt tctttgctgc cttcaaattt tcttcttgcc
    47161 ataaaaagca aagaattaag attatcctgc tttaaatctt tttgatttaa tcttgacata
    47221 agctccattc ctaaaagatt aaaactttca tttttggttt gttttaaaac aaaactctca
    47281 tcccattcaa gtcctaaatg ataaacaaaa tccttaagta aagtccctcc tacataatcc
    47341 tcccttagaa gtcttactat caaattttct tctccaaata cctcagcatg agttttgcaa
    47401 atccattcat agtcaaaaat atattttcta ggatgatctt gcggagcaaa atcagcagaa
    47461 taatacccca tattgttttt atggtcttga gaacaatgtg agtttaaata acccaaagta
    47521 tctctaaaat acacaataat ataaatttga gtaaaaccta actctctcat aatcttttct
    47581 aaaatttcta catgtttttt ggtagaaaaa tcccaaacta taccctcagc tgaaaaaata
    47641 aattttttat ctttatgtaa agcactttca cttttaaaat tttctatagc tctaagaagt
    47701 ctttcatttg tgatatgact taaaacactc tcttttttta aaatatcttc tttttgaacc
    47761 aattctaaaa ccatatccac caaagcccaa tgcctatttg ccactctaag actttttggg
    47821 taaatataag ctttttgcaa aagcttttct tcgttttgca tcaagaagcc ttgtttttct
    47881 tgatttcctg tattagtagt tcctatatgt aaatatgctg tcattttata tcctttatct
    47941 ttattttaat ttatcatctc taactcaaat ttatcttcta aatccttaaa cacaaatact
    48001 ttattcccgc aaggataaga gatagaattt tcttgcataa aagattttct tccttgtagt
    48061 ttttcaagca ttaaaggaag ttcttttcta aataaagccc tatcagtcat tctaagtcca
    48121 tgctctaaac tttttacaaa tctaccatct atatcatttt catcctttat taaatgtaaa
    48181 gttgcatcat atcctaattc ctgataacac ttataaagtt ctattttatt ttgcactggc
    48241 gcacccatat cttgtatact atgatagctt acaaaaatgg tatttttatt taaatttgat
    48301 tgaatttgaa gatggtttga atttaaaact gctctgatta aataattttc atcaccaaaa
    48361 taataagaag aattcatatt tctattccag tatttatata caaaacaata aagtctataa
    48421 ccacttcctt cgaaataaaa ttccccttga ttcatttctc ttcctaaaat gcacgccaaa
    48481 aatggcaagc aaacacctga attatcaatc acaccatcca cataccaagg agctatcttt
    48541 gctatgagca aggctaagta tcctccataa gacccccccc cataaatttt tggtaaatct
    48601 gcaaattttg gaaagcgttt aactaaatct tttaaagcat tgatatgatc aatagctgcc
    48661 ataatgccat agttttgata atctccatta ggtgggataa aatcacaaga aagttctatt
    48721 ttttggcttt catcaaccaa acctgcttgt ttcattttat taactttttg ctctataaga
    48781 ggaataattt gttcaaaatt atctttatta accgataaat gtcctaaatt aatatttttt
    48841 aaaatgccat ttacacgctc taaatcatct tgattgggaa taagctttgg attatacttt
    48901 tgatcaatac tttgtcttgc acaaaaacaa tgataaaaaa catgtaccac tacaacatca
    48961 aaatttttag caatatattc cctatcaaaa tctaaaaaag aaatatttgc attagctcca
    49021 aaaccaccca ctataaaaac tatggctttg atatcttttt catcatcata acttatgcga
    49081 tattcaagct tactggttct tttaatacct agttctacat catcacaaga atcaatttca
    49141 aaggtttggt ttataagcat atattttcct ttttaattaa taatcaattt taactgattt
    49201 tc
//
LOCUS       DAPIYB010000002        44810 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.002, whole genome shotgun sequence.
ACCESSION   DAPIYB010000002 DAPIYB010000000
VERSION     DAPIYB010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 44810)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44810)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44810
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.002"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            138..1544
                     /gene="aspA"
                     /locus_tag="RJ318_000052"
     CDS             138..1544
                     /gene="aspA"
                     /locus_tag="RJ318_000052"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HDV7429965.1"
                     /translation="MGTRKEHDFIGELEISDEVYYGVQTFRAVENFDISHDRLKDFPR
                     FVRALARVKKAAAMANHELGLLDKNIQDAIIKACDKILEGGYYDQFVVDMIQGGAGTS
                     TNMNANEVIANIGLELMGHKKGEYQYLHPNDHVNLSQSTNDAYPTALHLALHDYLSDL
                     AKAMEHLKKAYERKAEEFKDVLKMGRTQLQDAVPMTLGREFKTFAVMIGEDIQRVLEA
                     RKLILEINLGGTAIGTGINSHPDYPKVVERKIREVTGFEYTVAEDLIEATQDTGAYVQ
                     ISGVLKRVATKLSKVCNDLRLLSSGPKCGLNEINLPKMQPGSSIMPGKVNPVIPEVVN
                     QVCYFVIGADVTVTFACEGGQLQLNVFEPVVAYSLFNSVVMLEKAMYTLADKCIDGIT
                     ANEKICSDFVYNSVGIVTALNPYIGYENSASIAKEAMNTGKRVADIALERGLLSKEQI
                     DEILTPSNMLNPHMEAKK"
     gene            1560..2897
                     /locus_tag="RJ318_000053"
     CDS             1560..2897
                     /locus_tag="RJ318_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDV7429966.1"
                     /translation="MDIMIILQVIVLLGAIFIGIRLGGIAIGYAGGLGVVILGLVLGM
                     KPGNIPWDVILIIAAAIAAISAMQQAGGLDYMVRVTEKILRSSPKFINYLAPACGWLL
                     TILAGTGNAVFSLMPVVVDVAKSQNIKPSVPLSLMVVSSQIGITASPVSAAVVYMSGV
                     LEPLGWNYPTLIGIWISTTFVACMLAAFIVSLITPMDLSKDSVYQERLKAGLVKDAGA
                     VLHGEDKPGAKLSVVIFLITVLAVVLYATAISSNIKWIDPVVVSRDAAIMSFLLTAAT
                     LITWLCKVEPGKILDTSVFKSGMTACVCVFGVAWLGNTFVAGHEASIKEVAGDWVKQT
                     PAMLAVAFFFASMLLYSQAATAKAIVPVIITALGISAANPHDSYMLVACFAAVSALFV
                     LPTYPTLLGAVQMDDTGTTRIGKFIFNHSFFIPGVLAIAIAVALGFVLAPMLI"
     gene            3005..4366
                     /locus_tag="RJ318_000054"
     CDS             3005..4366
                     /locus_tag="RJ318_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7429967.1"
                     /translation="MKIKVGLIFSGIACLFLTACVNQVKQNTTFENTLTQKYCGDDFF
                     NQNLEKIKKNDDVIYTGLNAGLIARNCGDFNKSNVFFDAVEESYKYDVDLENVSPKAA
                     KFIGTTLLNDNIVDYDGSLYERIMVNIYKALNYMEEDDYENARVEFNRVLMRQDKAKE
                     YFAKEIEKNRADLDKAKEDKNYDKNMNENSKVIEAQYDNLFKEFDTTKNFINPYATYL
                     ASIFFFMDKDYRKAADLFREVAIIYPKNKTIKKEAKIFKEYATKIKVKKAKKYVFVVY
                     ENGFGVVKDEFALTLPFIVDKKIISTNIALQTLKKREASFANLNINGQNTNDFVDLDN
                     IVATEFKINMPAMIAKALAQTIIKTTLNVAVANNDSTGGWLSLATAVATAATNKADVR
                     SWRGLPKSIAIATIENDGNLEIKDPQGNILFQKSLDKNKNALVIVRSFAPYLPASVAI
                     MEK"
     gene            4376..4744
                     /locus_tag="RJ318_000055"
     CDS             4376..4744
                     /locus_tag="RJ318_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HDV7429968.1"
                     /translation="MKKNILFILMFLLSACAPSYQINSNQNTVILGSNLPKSLVKQFQ
                     KRINSNGYLEFEVILRSTFAKDVIYKVDWLDKDGFVLRDVLNEDYQALRIPAGQEVIL
                     RKLASDTRANDFRLEIKAKN"
     gene            4768..5391
                     /gene="lpoB"
                     /locus_tag="RJ318_000056"
     CDS             4768..5391
                     /gene="lpoB"
                     /locus_tag="RJ318_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HDV7429969.1"
                     /translation="MKKTKILGTALIGALLFSGCAQTAYTDGKASQVKKGDALTLGLD
                     RQDFESAAETMINSMLSDPAFANIKPGTRKVIAIGRVVNDTPQRIDTEKLTAKITSAL
                     RKSGKFVLTSAVAAGGALDSMSEDVRELRDNDEFNQKTIAKKGTLVSPDFSLAGKIRQ
                     DNVKLSNGKTQVEYFFLLRLTDLTSGLVYWEDEQTIDKTGSSKSVTW"
     gene            5474..6811
                     /locus_tag="RJ318_000057"
     CDS             5474..6811
                     /locus_tag="RJ318_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7429970.1"
                     /translation="MKKILFIGSLVMASLLYAQGSQPVEITQQDINTQNEMSDASTKD
                     ITPKSIEDFFEEFADNFGIEYGITKDGKTFYTGKSTVAVNDTDPQFAQALQNAYQKAM
                     LNLQSEFIRDAFGRIATSKIQNYEADNSTNAKEFDELPKGDKVDQILNKLTQLAGAQL
                     DKALKDLGIDTNSLSEDRKKTLLKQEFLNKTMTNAIGSMSGLVPVQTIVTQRRGEYDV
                     GVIAVISNKTRQLAKDMALARQSAIKGKGKAISEYLPKDTKGFLNEYGIRLVYDENGA
                     PIILSYGNWGYVADPSNAKKTNILEDRAKETALTMADAAIIEFINTNLSLKDERTTGD
                     TYEEIIKQSINVNDSSTQEQTQNITNIIDKVNSKIKASASGKIRGIRTLKKWSYTSEN
                     GIEHVGAVRFYSYENLANTNEALNSKSNATKNEAKKSSSIQRSSNVVNSMDDF"
     gene            6821..8023
                     /locus_tag="RJ318_000058"
     CDS             6821..8023
                     /locus_tag="RJ318_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7429971.1"
                     /translation="MKIIKILFLGLFLSLSLNAKVITTTSTKSSTGEGTGLTREDAIN
                     NAIIEAIGKMSGVSINSLKKSNTSVSTDNSGSNIQDNYSEQISKATKGRADTYEINSV
                     EQDANGKYTANVTIFKTTTTKKYQAPGLSADNRRSITVFDSTPDAAKRGIGSALQQKI
                     ISDLLQSRKFNVLDRDSSGYYEMEKALIKSGDAASDEVYKLKNMLATDYILLFSISGL
                     EGKQKTSNLTGKSKTEIEVIVDYRVLLFATRQIKFSNTLSMKVNLKDNSLSANETALK
                     QIANRIAGDILNAIYPLKVASVENNEVIFSQSLNQGDVYECFALGKVIKDTYTKENTG
                     RVESKTGSIEITRTSPKFSYAKITEGSVKVGDICRPLSNTGSGNGYTIGRDANYQTQE
                     GGGVNLGF"
     gene            8182..8490
                     /gene="rplU"
                     /locus_tag="RJ318_000059"
     CDS             8182..8490
                     /gene="rplU"
                     /locus_tag="RJ318_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDV7429972.1"
                     /translation="MYAIIKHSGKQYKVSVGDELKLDHFEAESKASIEVSEVLAINDK
                     ELKVGAPFVAGAKVVLEVINHGKDKKVVIYKKRRRKDSKLKRGFRRQFTRVVVKDIKA
                     "
     gene            8501..8755
                     /gene="rpmA"
                     /locus_tag="RJ318_000060"
     CDS             8501..8755
                     /gene="rpmA"
                     /locus_tag="RJ318_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDV7429973.1"
                     /translation="MAHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTA
                     THAGNNVGMGKDHTIFALIDGFVKFERKDKDRKKVSVYPA"
     gene            8862..9932
                     /gene="obgE"
                     /locus_tag="RJ318_000061"
     CDS             8862..9932
                     /gene="obgE"
                     /locus_tag="RJ318_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HDV7429974.1"
                     /translation="MFIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDI
                     IFVCDNNTHTLVNFKGKRELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNE
                     ILLDLTKEGQRELFLKGGKGGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIAD
                     VGLVGFPNVGKSTLISVVSNAKPEIANYEFTTLTPKLGLVDVNEYNSFVMADIPGIIE
                     GASGGKGLGLAFLKHIERTSFLLFVLDPMRQMPLKEQFIVLRKELEKFSNELFGRKFG
                     IMISKSDSVRLGEEFAEQIALNINELDNYLKEINNPQSFLIKVSSLEKTGLKELKFML
                     LEEIKTLRNNKKKFNNLGSVLY"
     gene            10020..10775
                     /gene="proB"
                     /locus_tag="RJ318_000062"
     CDS             10020..10775
                     /gene="proB"
                     /locus_tag="RJ318_000062"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDV7429975.1"
                     /translation="MKRIVVKVGSHVISEENTLSFERLKNLVAFLAKLMEKYEVILVT
                     SAAISAGHTKLDIDRKNLINKQVLAAIGQPFLISVYNELLAKFNKLGGQILLTGKDFD
                     SRKATKHAKNAIDMMINLGILPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVI
                     LSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLL
                     EHNKKMFLASGFDLSVAKTFLLEDKQIGGTLFE"
     gene            10849..11766
                     /locus_tag="RJ318_000063"
     CDS             10849..11766
                     /locus_tag="RJ318_000063"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDV7429976.1"
                     /translation="MKKIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVGRKQI
                     LTPSDTKAFLSQNYPSIPIFTPSSLKDKNIIREIKDLNPDFIVVAAYGKILPKAILDL
                     APCVNLHASLLPKYRGASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDK
                     NSSEVFELLANLAAKIILSTLLNFDKITPKKQEESLATLCRKIKKEDGLINLQNAREL
                     YQKYLAFTPWPGVFLENGLKFLELELVDELKQNAKMGEILELEKESFLLACKQGVLRI
                     KKLQESGKKALDGRTYLNGKRLKSEDSLC"
     gene            11729..12382
                     /locus_tag="RJ318_000064"
     CDS             11729..12382
                     /locus_tag="RJ318_000064"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDV7429977.1"
                     /translation="MEKGLKVKIVCVESIDSTHLFLCKQIRNGKIDENFAIYALEQIN
                     GVGSRENSWQSSKGNLHLSFCIKEEDLPKDLPLASVSIYFAYLLKEVLQEKGSKIWLK
                     WPNDLYLDDKKAGGVISAKISNFIIGGMGLNLKFAPQNTALCDIEISLKDLVSEFLQK
                     VEKKILWKNIFSKYMLEFEKSRKFSVHHEGKVFSLENSFLYEDGSILLGDKRVYSLR"
     gene            12379..13164
                     /locus_tag="RJ318_000065"
     CDS             12379..13164
                     /locus_tag="RJ318_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004278029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDV7429978.1"
                     /translation="MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQAN
                     ATTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELPQLHLAPSNIGLVGIEQELAKGE
                     NNEKKMLLKNQIQEVIDEYDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGV
                     AMVLNTIKIIKKTINSKLRVRGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGNED
                     DFIVIPRNVKLAESPSFGKPIILYDIKSPGSVAYQNLAYSILG"
     gene            13170..14006
                     /locus_tag="RJ318_000066"
     CDS             13170..14006
                     /locus_tag="RJ318_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDV7429979.1"
                     /translation="MGLNKDRGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPF
                     QPRKNFDQEALDELANSIKEFGLIQPIIVFKKNNKFILIAGERRLRAVKALGKKEILA
                     FIADIDENKLRELALIENIQRENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQI
                     TNTLRLLNLDIRTQELIASGKISQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKI
                     VKKIKNNESLPNQEFEDEIKKLKQILNRFGFDCKNKNNDFVIHLENIDKIKKLIKMLE
                     KL"
     gene            14067..14492
                     /locus_tag="RJ318_000067"
     CDS             14067..14492
                     /locus_tag="RJ318_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HDV7429980.1"
                     /translation="MFEDMHPSIMLATMAIFLAMIVILNSMLYKPLLKFMDERNDSIK
                     NDENKVKENSQEVLGVNDELEAIHINTREEIQKIKQSAIAAAKEEAEQILRSKKEELE
                     RKMASFYADLAVQKKELQEHLNIHLSELKQALQNNIKKI"
     gene            14503..15015
                     /locus_tag="RJ318_000068"
     CDS             14503..15015
                     /locus_tag="RJ318_000068"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDV7429981.1"
                     /translation="MSKLFFIIFLLPLYAFGASNGSGEYDIIPRTINFLIFVAILYYF
                     VATPFKNFYKNRIVKISSKLDEIQKKLLESKAKKLDTMKKLEEAKASAAAALITAKKE
                     AEILVQNIKKETQDELDLLQKHFEEQKDYEFRKMEKELVSNTLNEIFSDPNMTLKQSE
                     IIELMMKKVS"
     gene            15018..15539
                     /locus_tag="RJ318_000069"
     CDS             15018..15539
                     /locus_tag="RJ318_000069"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDV7429982.1"
                     /translation="MENIIARRYAKAIASRADINDFYQNLCILNSAFVLPKFKNIIES
                     NEIKKERKMEFLDSFFDIKNSSFQNFLRLLIENSRLECIPQIVKELERQKAFKENIFV
                     GIVYSKEKLSQENLKDLEVKLNKKFDANIKLNNKISQDDSVKIELEELGYELSFSMKA
                     LQNKLNEYILKII"
     gene            15553..17058
                     /gene="atpA"
                     /locus_tag="RJ318_000070"
     CDS             15553..17058
                     /gene="atpA"
                     /locus_tag="RJ318_000070"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDV7429983.1"
                     /translation="MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGL
                     KNIMAGEMVEFENGDKGMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEA
                     LIGRVVNALGEPIDAKGVINANEYRFVEEKAKGIMARKSVHEPLHTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAM
                     EYTIVVNAGASDPAALQYLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLI
                     LRRPPGREAYPGDVFYLHSRLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNV
                     ISITDGQIFLETDLFNSGIRPAINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYREL
                     QAFAQFASDLDEASRKQLERGQRMVELLKQPPYSPLSVEKQVVLIFAGTKGFLDDIAV
                     SRIKEFEDGIYPFIEAKHPDIFEQIRSKKALDSDLEEKLAKAINEFKANHL"
     gene            17067..17951
                     /locus_tag="RJ318_000071"
     CDS             17067..17951
                     /locus_tag="RJ318_000071"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDV7429984.1"
                     /translation="MSNLKEIKRKIKSVHNTQKTTNAMKLVSTAKLKKAEEAAKRSKI
                     YAQKIDEILSEISFQINKIVHNEDDVRLSLFHKKEQIKTVDLIFITADKGLCGGFNIK
                     TLKTVSEMLKEYEAKNINIRLRAIGKTGIEYFNFQKIELLEKYFHLSSSPDYEKACEV
                     IHAAVDDFLNGNTDEVILVHNGYKNMITQELKINHLIPVEPKSIEQTHNSLLELEPEG
                     TELLKDLMKTYFEYNMYYALIDSLAAEHSARMQAMDNATNNAKARVKQLNLAYNKARQ
                     ESITTELIEIISGVESMK"
     gene            17977..19374
                     /gene="atpD"
                     /locus_tag="RJ318_000072"
     CDS             17977..19374
                     /gene="atpD"
                     /locus_tag="RJ318_000072"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDV7429985.1"
                     /translation="MQGFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLE
                     VAAHLGDNRVRTIAMDMTDGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGE
                     EISFDKKWAIHRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTV
                     IIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGA
                     RNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLA
                     SEMGKFQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGI
                     YPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSEEDKL
                     VVERARKIEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFYMV
                     GNIDEAIAKADKLKG"
     gene            19378..19767
                     /locus_tag="RJ318_000073"
     CDS             19378..19767
                     /locus_tag="RJ318_000073"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDV7429986.1"
                     /translation="MNDLINFEIVTPLGVIYQGEVKSVTLPGSEGEFGVLKGHAALVS
                     SLKSGVIDIEKADLNHELIAIDAGHAKVDEDKICVLAKGAVWVCGSDESEIEKNLAQA
                     KDLIKSMSSDNAALAATFSKLDNARMH"
     gene            19767..20321
                     /locus_tag="RJ318_000074"
     CDS             19767..20321
                     /locus_tag="RJ318_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDV7429987.1"
                     /translation="MNFEAIFHFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLAT
                     WRNKEKESLETLLLGEKDLSRTDSILRKCNDTTSNHLEIYKNLASRRASAGLTWLSII
                     ASTSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISEALVATGCGILVAIPAYTFHL
                     IIKRKAFELLSIIDSEIKVISSSK"
     gene            20330..20719
                     /locus_tag="RJ318_000075"
     CDS             20330..20719
                     /locus_tag="RJ318_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HDV7429988.1"
                     /translation="MPFDDEKPELNITPLVDIMLVLLAILMVTAPSITYEEKINLPQG
                     SQKNTSTPTVKSLIISINAKKEIFLNQEKYDFISFADNLAQRKAQFNTEDPVFIRADK
                     SLKYDDVISVLRSVKNLGFNKVALQTE"
     gene            20722..21501
                     /locus_tag="RJ318_000076"
     CDS             20722..21501
                     /locus_tag="RJ318_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HDV7429989.1"
                     /translation="MKNYGLSNLNSFLLALAIYISIVILVFFRLVSEVEPAIQYTDIK
                     DSFVDIELAEPSKQVITQSNTPKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNF
                     NELFGNIKEIQEEKTTKIQSSAKSGISSAPKPQASELVKQLNDSLLQEESSTQGESTK
                     AQKIGIYDEFLGKVVRIITQRWTQYYPNSEKISVKVKIFIDENGKFGYTSVEKSGNPL
                     YDAKVAEFLESQKGKFITYPPQNKNISITMNLRDEVKVKND"
     gene            21511..22719
                     /gene="tolB"
                     /locus_tag="RJ318_000077"
     CDS             21511..22719
                     /gene="tolB"
                     /locus_tag="RJ318_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HDV7429990.1"
                     /translation="MKKIVAIFLVFLGSLWAEDPVIDVVNSGVVLPKIIVKDNSNLSD
                     ENLKKSFYNIIVNDLKVSSNFEVVANATETSNYIFEYTLNKNGNTLSLNVKIKAGGSD
                     KSEQTYTLNGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSSKKSQIIMAD
                     YTLTYQKVIVDGGLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSSGG
                     MVVASDVNVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSK
                     VVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNNSAVSTYKDFLVYSSREPNQAGVFNI
                     YLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFPL
                     RVGKIQSIDW"
     gene            22796..23293
                     /gene="pal"
                     /locus_tag="RJ318_000078"
     CDS             22796..23293
                     /gene="pal"
                     /locus_tag="RJ318_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HDV7429991.1"
                     /translation="MKKILFTSIAALAVVISGCSTKSTSVSGDSSVDSNRGSGGSDGW
                     DIDSKISQLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEW
                     GTDEYNQALGLKRAKAVKEALIAKGVNADRIAVKSYGETNPVCTEKTKACDAQNRRAE
                     FKLSR"
     gene            23297..24244
                     /locus_tag="RJ318_000079"
     CDS             23297..24244
                     /locus_tag="RJ318_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDV7429992.1"
                     /translation="MKKIFTVALLGATLLYAESSAFGAGDITSNSSYGLTSNEKLFKE
                     KLDNLNNENIQTNARINEINERIEGLQSTLEGINSQYAKSNSRLSQVEENNQNIENNF
                     TSEIQKLKAYVEESRKIQEANNKQVKKVLAELSSLVDAINANYVSKNELNDANLSVKT
                     ITPSVVVSTTDSNSTIENNNTQNTQDDKAKQIDESWKKKKNNEILELAIKDVDKNAFE
                     DSKAKLNFLITKQYKPARANFWLGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLY
                     HTAISLDKTGDTKTANGFYKALKTNYPNSPEAKASPNRK"
     gene            24259..24828
                     /locus_tag="RJ318_000080"
     CDS             24259..24828
                     /locus_tag="RJ318_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDV7429993.1"
                     /translation="MAIEKNSVVSMFYELKDANTNEVLESNLYSQPISFILGKGQILE
                     SLEEEVMKLDCPSNADVVIKKEKGLGEYDENAVQTLPKEQFAGIDLKVGMELFGEGEN
                     GETVRVTVKEIGENDVTIDYNHPYAGRDLLFSLNIVDARAASEDEILTGIIAGSHSCG
                     CGSGHGHDHHHGHGHGGGGCCGGGGCGCH"
     gene            24828..25748
                     /gene="fabD"
                     /locus_tag="RJ318_000081"
     CDS             24828..25748
                     /gene="fabD"
                     /locus_tag="RJ318_000081"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDV7429994.1"
                     /translation="MNAAFIFPGQGSQSLGMGKDFYENSIKAKELLQNASDFCKIDFK
                     HLLFEENEKLNQSEFTQPAIVLNSLMAYSVLLEKKPDLSSKFALGHSLGEFSALAVNG
                     AFDFLEALSLVNKRGLFMQEDCAKVEAGMMVVLGLDDEKVEELCQKAQKENKQIFAAN
                     YNCDGQIVVAGLKPDLASYESVFKEAGAKRAMLLNMSVASHCPLLENASAKLCVELEK
                     VLKPNFKAVISNANAKIYTSKEEALELLKAQLISPVLYKQSIKACENEVDYFIEFGAS
                     VLKGLNKKITSKETYALTNMNDIDEFLKVV"
     gene            25745..26434
                     /gene="pfs"
                     /locus_tag="RJ318_000082"
     CDS             25745..26434
                     /gene="pfs"
                     /locus_tag="RJ318_000082"
                     /EC_number="3.2.2.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxyfutalosine nucleosidase"
                     /protein_id="HDV7429995.1"
                     /translation="MMKIAILGAMSEEITPLLETLKDYTKIEHANNTYYFAKYKNHEL
                     VLAYSKIGKVNSTLSASVMIEKFGAQALLFTGVAGAFNPELEIGDLLYATKLAQYDLD
                     ITAFGHPLGFVPGNEIFIKTDEKLNNLALEVAKELNIKLRAGIIATGDEFICDEAKKA
                     KIREIFNADACEMEGASVALVCDALKVPCFILRAMSDKAGEKAEFDFDEFVINSAKIS
                     ANFVLKMCEKL"
     gene            26431..27186
                     /locus_tag="RJ318_000083"
     CDS             26431..27186
                     /locus_tag="RJ318_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HDV7429996.1"
                     /translation="MINLSKKLIRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALAHL
                     LNRMQAHAPFKFELEAVTLSYGMGEDYSHLHAHCEEHGIKHSVLDSNIYEVSGDTIRE
                     NSSFCSYFSRMRRGALYTYALEKGFNKLAIAHHLDDAAESFFMNFIHNGALRTLAPIY
                     QSKRGITVIRPLIFVRERQLRDNATQNELSVIGNEFCPGMKLSEKNVKFPHAREEAKQ
                     LLANLEKDHPKLFTSLKTAFANLHTESFWLQKA"
     gene            27191..27712
                     /locus_tag="RJ318_000084"
     CDS             27191..27712
                     /locus_tag="RJ318_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase family protein"
                     /protein_id="HDV7429997.1"
                     /translation="MKKAFVLVDYQNDFIDGSLGFDKALKIKENILKALNQIDFNNTH
                     LLLTYDTHDEHYLQSKEGLNLPVKHCIKESLGWQMPKEFEPFLQKAHKIFYKNTFGSL
                     ELANFIQKSDYEELHFAGLVSHICVFCNIILAFGAKPNARIILHQNLSASFDENLEKS
                     AFDILRAYGIEIV"
     gene            27712..28326
                     /gene="recO"
                     /locus_tag="RJ318_000085"
     CDS             27712..28326
                     /gene="recO"
                     /locus_tag="RJ318_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecO"
                     /protein_id="HDV7429998.1"
                     /translation="MQGFILHTQKVKDEDLIVYILSPKMLIKAYRFYGLRHSSILSGY
                     KIDFALEENPSFLPRLKDVLHLGFLWIMQRDKMLIWQEFIRLLYRHLKDVEELDSFYF
                     DLLDECVKRFEKQNPKRVIVDAYLKILEFEGRLHKDFFCFACDEKIQNSITLLRAFLP
                     SHSQCALGFEFEEKKLKQFYSSKNCAIFDDEEIENLYHLIKEGL"
     gene            28323..28730
                     /gene="ybeY"
                     /locus_tag="RJ318_000086"
     CDS             28323..28730
                     /gene="ybeY"
                     /locus_tag="RJ318_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDV7429999.1"
                     /translation="MILSDEKCDFLESIASFLSPKDVELVFVDSKEMQEINLEQRKQD
                     KTTDVLSFPLENIDESLPLGSVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGF
                     DHENDNGEMREKEKELIEHFNLPKSLIVRTLED"
     gene            28854..29543
                     /locus_tag="RJ318_000087"
     CDS             28854..29543
                     /locus_tag="RJ318_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430000.1"
                     /translation="MIVFPLSSFNRYFGNNPLQTLTKIRDESIENGNPELTKKQREEL
                     GNDLIDLYKISKKFSDKIELVEGSIEDKLRNNELPESEVKNLFQWMDENAKHPRWMHI
                     DGVSYDEAYVKIFHTSKSIDEFKEKYLELQKKYFVDFNNIDSSQKKLQETSEEDKKAF
                     KPIQVESKSETYKDDNKMNELLRKLLETKFGTSDELEILFGMNFSNDNAGEFNKILSQ
                     NTSAKIIDIKA"
     gene            complement(29568..30494)
                     /locus_tag="RJ318_000088"
     CDS             complement(29568..30494)
                     /locus_tag="RJ318_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HDV7430001.1"
                     /translation="MIDFSKKPLFLAPMAGFSDLPFRNVVKKFGADITISEMISSNAL
                     VYESSKTLHMLERAELENPYIVQIAGGDKEVLKKAVQMLNEMDFVDGIDFNCGCPVNK
                     VVKQCAGSALLENLELFKNLVGVIKENNKKSLTSVKFRLGFNEKYPEKMAKICESLGV
                     DFISIHGRTRKQLYSGKADYGSIASAKASVKIPVIANGDINAQNAKEVYKITKCDGLM
                     IGRASVGNPWIFYEIKSGKSVDEKLKKEIILTHFDEMIKHYKDQGVSIFRKHLHEYSK
                     GHKDASAFRDTVNRIDNVEEMRKKIEEFFSLT"
     gene            complement(30491..31477)
                     /locus_tag="RJ318_000089"
     CDS             complement(30491..31477)
                     /locus_tag="RJ318_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430002.1"
                     /translation="MKIKLFLLASFIYIALIFAFAWHLELGSYTLNISTYTFELPIMI
                     WLVIPLFIYMILAVLHIAFYGFLRYLKFKHFFKDAAKFEAYTQDLLLEKDLKTTFQTK
                     EFRSVAQLFKTIKTHEKIPHSNKINEILDLIDGLNKNEFFNLSKFKLENNNVLYLQNE
                     KNHLKNDANYAYNKLKNLNEIKDEFEEIAFNTLIEKASYEQIKNVKIPKKPSEVLTLI
                     KRFKEGNLELSVAEYEVLLSHNILSEKDYLNAAKLSTKLLNPDAILGIFNKIKNEKSE
                     ALRAYLYLLAEFGLLDELREQIHNDDKKFNDFKAFLALREKNIKIDLNQLIQ"
     gene            complement(31467..31829)
                     /gene="dksA"
                     /locus_tag="RJ318_000090"
     CDS             complement(31467..31829)
                     /gene="dksA"
                     /locus_tag="RJ318_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK suppressor DksA"
                     /protein_id="HDV7430003.1"
                     /translation="MKKNEIQNFKNILEERKKAILENLQSNSNEIEALHNSVPSDSVD
                     FSVIETGSQIDFAISTNLKEELIEIEDSLDKIKNGTYGICESCDDEIDSQRLKVKPHA
                     RYCITCRQIAEQGKKHEN"
     gene            complement(31841..32290)
                     /locus_tag="RJ318_000091"
     CDS             complement(31841..32290)
                     /locus_tag="RJ318_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDV7430004.1"
                     /translation="MQVNIFCIQKSDEFKTCSEKYSKLISKYATLKEINVFNKKIALA
                     QNLNAIEAKKSYEEAFMPYKKGYCIALDEKGKDLTSIEFAKLIQDKNELSFFIGGAYG
                     LREEFNQSLDFRLSLSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK"
     gene            complement(32292..33134)
                     /locus_tag="RJ318_000092"
     CDS             complement(32292..33134)
                     /locus_tag="RJ318_000092"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HDV7430005.1"
                     /translation="MNFADIFSKIRRQQPSVKEAPNHWVKCQSCHALMYYKEIESCFN
                     VCPKCNYHMRISADERIKLLSDEGSFIEYDANLEAIDPLKFVDSKSYKKRLSEGESKT
                     GRKSSVISGECEINGLKTQLVVFDFSFMGGSLGSVEGEKIVRAIQRAITSKTSLVIVS
                     ASGGARMQESTYSLMQMSKTSAALKLLSKEKLPYISILTDPTMGGVSASFAWLGDLII
                     AEPEALVGFAGARVIKQTIGADLPEGFQKAEFLLEHGLIDAIVERGEQKQYLSDVLKF
                     FSGK"
     gene            complement(33143..33865)
                     /locus_tag="RJ318_000093"
     CDS             complement(33143..33865)
                     /locus_tag="RJ318_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HDV7430006.1"
                     /translation="MKEFLDACLNANLQIRKYLNNIPQNDLKLCSKLGYDKNQGYELD
                     LKCEQIFIKYLSCFGQIFSEESGLIGKASPKQMILDPLDGSSNFVSKIPFYGTSIALM
                     EKDQAKSAFVCNLVSQEIFAFNNKQAFKSNLSDPKYSPLTPNLFSKIGIVEKISLYPE
                     LLDFLTKNQLKFRSLGATALSLAYASYFSFVLILGKTRIFDTAAALAIHQNLYIEKNE
                     NFLLLSQDKKIFDIILEFLKNN"
     gene            complement(33865..36084)
                     /gene="bamA"
                     /locus_tag="RJ318_000094"
     CDS             complement(33865..36084)
                     /gene="bamA"
                     /locus_tag="RJ318_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDV7430007.1"
                     /translation="MKKHLISICALVAMANAATIKDIKFIGLNHLSNTSAINIAGLKI
                     GEEINPAKINTAILNLYKQNYFENIAVENNNGILEIIVTEKPTIAKVSITGIASNDRK
                     QVESILGIKRGTLLDEGSIKEAIERIKAYYEAKSYFDTIVEYKKKTLENTDGLELEFI
                     VNRGENIIIDNVHLSGAKKFSYSDIEPAVVNKEKEFMGWMWGRNDGKLKVFELSNDSS
                     RIADEYMKKGYLDVQVSSPYLKTYTDTYQANLTYFIKEGKPYKIKSISIENPLFDDKQ
                     NAQTVKDLRSSAGKTINIEDIRKDVKTIETQSADLGYAFVEVYPDIQKNDQTQEATVV
                     FKVIPHDKVYIRNVIISGNSRTVDRVIRRELYITEGNLYNRTDLSESKNALKRTSYFD
                     DVNIKEEKVDDTHIDLIVDVKEASTGAISGGIGYGSSDGILLNASLSDTNIFGSGIKS
                     SVSVDKSDDTLSGRISLVNPRVLDSQYSLGGTLYSNDYEWDNYSEKNYGFDITIGRQF
                     ARYYNVSLTYNLEQSDIYHLSPTLLRTGYELGKSIKSSITPAITFNDTDDYYLPRSGI
                     IASTSLEYAGLGGDQEFISSSSKFNFYQGLQDYIGYDLIYRYKASFYKVWDEGYLPIN
                     QRIYLGGIRSIRGFESRTVSPKNQWGDEIGGTIAFANSVELSFPLIDRIKLRGSVFFD
                     YGMIGRKNLDEIKRMSTGIGIEWITPIGPLQLVFAKPLNDKKGDDTNSFEFNLGTRF"
     gene            36161..36988
                     /locus_tag="RJ318_000095"
     CDS             36161..36988
                     /locus_tag="RJ318_000095"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HDV7430008.1"
                     /translation="MKIAIIGLGLMGGSLGLCLKENKLISCVYGMDLIKENEKDALQL
                     GLIHELIEFKDLALCDMIFVATPVDAIIEILQKLVDLPSNVTIIELGSTKRKIIESLP
                     KNLIKQTLFAHPMTGTENSGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLG
                     MKIVFMDSKAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAK
                     SSPQMWESIFLQNKDNLLSSIDFFQQELERCKQMIQLDKNDELREWMKQANTLREIL"
     gene            37068..38441
                     /locus_tag="RJ318_000096"
     CDS             37068..38441
                     /locus_tag="RJ318_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDV7430009.1"
                     /translation="MAKRKGKTYLSVLILVLIAILIFFISRLSIFEKNPPQILMPDVV
                     YTDLKKPILVHIKDDESSIKNVQIILHKDDNTSAMVIADEKISNLKDITLQVALPKFG
                     YKENVKSFVLEVIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAG
                     AVVFKADDANLDKVYIETNKGKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKA
                     GNISKERIRYYFVNRKYRVSNINLTDKFLDGKIENLANQYAPKDNNLNRYEKFKFVNE
                     TLRNSNEKLIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFADHRYYSYNGQFVSDS
                     YHMGLDLASVAQAPIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDL
                     DEMINKQSIIGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGK
                     KIILGKN"
     gene            38441..39325
                     /locus_tag="RJ318_000097"
     CDS             38441..39325
                     /locus_tag="RJ318_000097"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDV7430010.1"
                     /translation="MKQLTLAKTVKGVGIGLHKGEPIEITLEPLEANSGIVFFRSDLN
                     ASYKASPENVINTQMATVLGDDRGFISTIEHLMSAINAYGIDNVRIVLNANEAPVMDG
                     SSISFCMMLDEAGVKELDAPKKIMVIKKPIEVRDGNKFVRLTPTKEPRINYTIKFDNA
                     VIGEQSYNFEFSKKNYIENIARARTFGFLKDVQALRSMNLALGGSLENTIVVDENRIL
                     NPEGLRFKDEFVRHKILDAIGDLTLLGYRVFGDYTSYAGSHHLNHLLTKEVLKDKDAY
                     EIVSLEKTTQKAYEKVFA"
     gene            39364..39765
                     /locus_tag="RJ318_000098"
     CDS             39364..39765
                     /locus_tag="RJ318_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine biosynthesis
                     protein TsaB"
                     /protein_id="HDV7430011.1"
                     /translation="MIGIYQDDKLIKTYKSEEKASEFLPKILDELLKEYDFTSLIYAN
                     GPGSYMGIKISYVSLSTLSIVKNIPLFAVSAFELNGYKPISANKNFCFVYKEGEICLE
                     QNIPAEFFLPKNLQELKLNNDNLPFYFLDAI"
     gene            39774..40652
                     /locus_tag="RJ318_000099"
     CDS             39774..40652
                     /locus_tag="RJ318_000099"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDV7430012.1"
                     /translation="MKILVPATSANLGPGFDCLGLSLKLFNETQIQKSGVFSISIGGE
                     GSDNIFLKKNNIFVNIFYEIYEKLSGKKDNFRFIFQNNIPLSRGLGSSSAVIVGAIAS
                     AYYMSGFKVEKERILDEALIYENHPDNIAPATLGGFVCSLVEKNKVYSIKKEIDKDLA
                     AVVVIPNLAMSTEQSRQALAKNLSFNDAVFNLSHASFLTACFLEKKYEFLKFASQDKL
                     HEINRMKNLPELFEVQKFALENKALMSTLSGSGSSFFSLAFKDDALALAKKIQTKFKD
                     FRVQYLEFDDNGFEIC"
     gene            40677..40934
                     /locus_tag="RJ318_000100"
     CDS             40677..40934
                     /locus_tag="RJ318_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HDV7430013.1"
                     /translation="MKKHIPIRMCIVCKNRFEQNMLFRFKVVLGDIVPKAEHGRSGYL
                     CQNCIEREDKVLQKAFSKICKNLNTKITQQGLKEIFLNGKD"
     gene            40921..43536
                     /gene="infB"
                     /locus_tag="RJ318_000101"
     CDS             40921..43536
                     /gene="infB"
                     /locus_tag="RJ318_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDV7430014.1"
                     /translation="MAKIRIHEIAKELGYDSKEIIEKANELGLGIKTASNAVEPEIAA
                     AIYEYIQTREIPEAFKKNIKTPTAKKPKKENIKEQEKLNESEKKEPKKEEKLKQEVKK
                     EELKIEKENAKEEEKQEIIDAHKPQSLASATLAKRRGLVIVKKKKDEEEIQVKKEEVK
                     NSNDISINNEERLSLKTMFSNADESLKKKKKEKKSFVASKKESTEKMNFLDEHDFGDI
                     SLDDEDEVVLPDFSVKEQEKPQNINKKQPNFIRQAVGNSAGFGLEGGIQRRSRKKPSK
                     KIEKKEVEEVGSVAISKEIRVYEFADKIGKSTSEVISKLFMLGMMTTKNDFLDEDAIE
                     ILAAEFGIEINIINEADEFDYVKDYEEETDEKDLVTRAPVITIMGHVDHGKTSLLDYI
                     RKSRVASGEAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVV
                     AADDGVKPQTKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGS
                     YEFVGVSAKTGMGIEDLLEIVLLQADILELKANPKSFAKASIIESSVQKGRGAVATII
                     VQNGTLTVGSTVVAGEAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIA
                     VKTDKEAREYANKRHEYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSL
                     EALKASLEKLRNDEIKVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEVKERA
                     KDKGVEIKTYNVIYNLLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKIGQIAGCM
                     VTEGVINRGAKIRLIRDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVG
                     DYIESYKEVEEQASL"
     gene            43533..43895
                     /gene="rbfA"
                     /locus_tag="RJ318_000102"
     CDS             43533..43895
                     /gene="rbfA"
                     /locus_tag="RJ318_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDV7430015.1"
                     /translation="MNPSEIKKLRTESILKELIPEALANLDDENLKNLCVVDVECKKG
                     RYDAFVYLDKMFFNVHEQEKILSSLKKASRALQNYCMSEQGWYRCPNFHFKFDDRLEY
                     QNHMDALFEKIKKDKNES"
     gene            43885..44307
                     /gene="rimP"
                     /locus_tag="RJ318_000103"
     CDS             43885..44307
                     /gene="rimP"
                     /locus_tag="RJ318_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDV7430016.1"
                     /translation="MNLEALCKEAGLSFYDDELVSENGRKIYRIYVQKEGGVNLDDCA
                     RLSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAKSIGELVKIATNEKEKFE
                     AKIIAVDDENIILENLETQEKTTINFNDIKKARTFVEW"
     gene            44354..>44810
                     /locus_tag="RJ318_000104"
     CDS             44354..>44810
                     /locus_tag="RJ318_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HDV7430017.1"
                     /translation="MWNLDEKKLQEMLDGFLNFQEVWTLEKVKNMTLEEYTNIKKDNP
                     NRDDFTFWIESKLDNLGSIWGGSAFKFGIYRRNDESQKESSSGRLYSQNYAWIAKYGN
                     NENEAFNNIKEKIIQIIQASQDNNLKTIEKIDFGDAIKWKIAFHYQDVKN"
BASE COUNT        16231 a         5818 c         8096 g        14665 t
ORIGIN      
        1 aaaaatactt aatttatcgt atttgaaagc agtttactta ttaatcaatt attaactaaa
       61 aatgcgatat cattatttta tgatttaaat caaaaatttt tgatttaaaa ttaaaatact
      121 tttatgaaag gttcaaaatg ggaacaagaa aagaacatga ttttattggg gaattggaaa
      181 tctctgatga ggtttattat ggagtgcaaa cttttagagc tgttgaaaat tttgatattt
      241 ctcatgatag attaaaagat tttcctcgct ttgttagggc tttggctaga gtaaaaaaag
      301 ctgcagctat ggcaaatcat gaattaggtc ttttggataa aaatatccaa gatgcgatta
      361 ttaaagcgtg tgataaaatt ttagaaggtg ggtattatga tcaatttgta gtagatatga
      421 tccaaggagg tgctggaaca agtacaaata tgaatgctaa tgaagttata gcaaacatag
      481 gacttgaact tatgggtcat aaaaaaggtg aataccaata tcttcatcca aatgatcatg
      541 ttaatttaag ccaaagtact aatgatgctt atcctacagc tttacacctt gccttgcatg
      601 attatttaag tgatttggca aaagctatgg aacatctaaa aaaagcttat gagagaaaag
      661 ctgaagaatt taaagatgtt cttaaaatgg gtagaaccca actgcaagat gctgtaccta
      721 tgactttagg tcgtgaattt aaaacttttg ccgtaatgat aggtgaagat atacaaagag
      781 tattagaagc tagaaaattg attttagaga tcaatttggg tggaactgct attggaacag
      841 gaattaattc tcatcctgat tatccgaagg ttgtagaaag aaaaataaga gaagtgacag
      901 gttttgaata tactgtggct gaggatttaa tcgaggcgac tcaagatacg ggagcttatg
      961 tacaaatttc aggtgtttta aaacgtgttg caacaaaact ttctaaagta tgtaatgact
     1021 taagactttt aagtagtggt ccaaaatgtg gtcttaatga gattaatctt ccaaaaatgc
     1081 aaccaggtag ttctatcatg ccaggtaagg taaatcctgt tattcctgaa gtagttaatc
     1141 aagtttgtta ttttgttatt ggagcagacg taactgtaac ttttgcttgt gagggtggac
     1201 aattacaact taatgttttt gaaccagttg tagcatatag cttatttaat tctgttgtaa
     1261 tgctagaaaa agcaatgtat actttagctg ataaatgtat agatggtatt accgcaaatg
     1321 aaaaaatttg ttcagacttt gtctataatt cagtaggtat agtaacagct ttaaatcctt
     1381 atattggtta tgaaaattca gcttctatag ccaaagaggc aatgaacact ggaaaaagag
     1441 tggctgatat tgcgcttgaa agagggcttt taagcaaaga acaaattgat gaaattttaa
     1501 ctccatcaaa tatgctaaat cctcacatgg aagctaaaaa atagcactta ggatttaata
     1561 tggatataat gataattttg caagtaatcg tccttcttgg ggcgattttt atcggtattc
     1621 gcctaggtgg tattgctata ggttatgctg gaggattagg tgtagttata ttagggcttg
     1681 ttttaggtat gaaacctggt aatattcctt gggatgttat tttaattatt gccgcagcta
     1741 ttgcagcaat ttctgctatg caacaagcag gtggacttga ttacatggta agggtgacag
     1801 aaaaaatttt aagatcaagt cctaaattta taaattattt agctccagct tgtgggtggt
     1861 tgcttacaat tttagcagga acaggaaatg cggtattttc tttaatgcct gttgtagttg
     1921 atgttgcaaa atctcaaaac ataaaaccta gtgttccact ttcattaatg gttgtttctt
     1981 cgcaaattgg aatcactgct tctcctgtaa gtgcagctgt ggtttatatg agcggagttt
     2041 tagagccact tggatggaat tatccaactt taattggaat ttggattagc acaacttttg
     2101 tagcttgtat gcttgcagct tttatagtga gtttaatcac tcctatggat ttgagtaagg
     2161 atagtgttta tcaagaacga ttaaaagcag gacttgtaaa ggatgcagga gctgttttgc
     2221 atggcgaaga taaaccaggt gctaaacttt cagtggtaat tttcttgatc actgttttgg
     2281 cagttgtact ttatgcaacc gcaatttcaa gtaatattaa atggattgat cctgttgtgg
     2341 tttcaagaga tgcagctatt atgagctttt tacttactgc agcaactttg atcacttggc
     2401 tttgtaaagt tgaaccaggt aaaattcttg acactagtgt atttaaaagc ggtatgactg
     2461 cttgtgtttg tgtttttggt gtagcatggc ttggaaatac ttttgttgca ggacacgaag
     2521 cttctatcaa agaagtagca ggcgactggg ttaaacaaac ccctgctatg ttagcagttg
     2581 catttttctt tgcaagtatg cttttatatt ctcaagcagc aaccgcaaag gccattgtac
     2641 ctgtaattat cactgcttta ggaatttcag cagcaaatcc gcatgattct tatatgcttg
     2701 tagcttgttt tgcagcagtt tcagcacttt ttgtacttcc aacttatccg actttgttag
     2761 gtgcagtgca aatggatgat acaggaacga ctagaattgg taaatttata tttaatcact
     2821 cattctttat accaggggtt ttagctattg caattgctgt agcattaggc tttgtattag
     2881 ctcctatgct tatttaaatc aaaccctagg tttttctctc ctagggttaa aattttttca
     2941 ttagttttta agtatatact acgctataat attcattttt aattttcttt aagaaaggaa
     3001 tttaatgaag ataaaagttg ggttgatttt ttcaggtatt gcttgccttt ttttaacagc
     3061 ttgtgttaat caggttaaac aaaatacaac atttgaaaat actttaacac aaaaatattg
     3121 tggtgatgat tttttcaatc aaaatttaga aaaaattaaa aaaaatgatg atgtcattta
     3181 tacaggatta aatgcaggtt tgattgctag aaattgtggt gattttaata aaagtaatgt
     3241 attttttgat gctgtagaag aatcttataa atatgatgtg gatttagaaa atgtaagccc
     3301 taaagcagct aaatttattg gtacaacctt gcttaatgat aatatagtag attatgatgg
     3361 ttctttatat gaaagaatta tggttaatat atataaagct ctaaactata tggaagaaga
     3421 tgattatgaa aatgcaagag ttgagtttaa tcgtgtttta atgcgtcaag ataaggcaaa
     3481 agaatatttt gctaaagaaa ttgaaaaaaa tcgtgctgat ttagataagg caaaagaaga
     3541 taaaaattat gataaaaata tgaatgaaaa ttcaaaagtt atagaagcgc aatatgacaa
     3601 tttatttaaa gaatttgata caacaaaaaa tttcataaat ccttatgcga cttatcttgc
     3661 ttcaatattt ttctttatgg ataaagatta tagaaaagct gcagatttat ttagagaagt
     3721 agctattatt tatccaaaaa acaaaactat caaaaaagag gctaaaattt ttaaagaata
     3781 tgccacaaaa ataaaagtca aaaaagctaa aaaatatgtt tttgtagttt atgaaaatgg
     3841 atttggtgta gttaaggatg aatttgcttt aaccttacct tttatagtgg ataaaaaaat
     3901 tattagcaca aatattgctt tgcaaacctt gaaaaaaagg gaagcttctt ttgcaaattt
     3961 aaatataaat ggtcaaaata caaatgattt tgtagattta gacaatattg tcgctactga
     4021 atttaaaata aatatgcctg caatgattgc taaagcctta gctcaaacta taattaaaac
     4081 cactttaaat gtagctgttg caaataatga ctctacaggt ggatggctaa gtcttgcaac
     4141 agcagtagca actgctgcaa ccaataaagc tgatgtgcgt tcttggagag gtttaccaaa
     4201 aagtattgcc atagcaacaa tagaaaacga cggaaattta gaaatcaaag atccacaagg
     4261 caatattttg tttcaaaaat cattggataa aaataaaaat gctcttgtga tagtgcgttc
     4321 ttttgctccg tatttacccg caagtgttgc tatcatggaa aaataaggct aaaagatgaa
     4381 aaaaaatatt ttatttattt taatgttttt acttagtgct tgtgcaccaa gttatcaaat
     4441 aaattcaaat caaaatactg taattttagg ttcaaattta ccaaaaagtt tagtaaaaca
     4501 atttcaaaag cgtataaata gcaatggtta tttagaattt gaagtgattt tgcgcagtac
     4561 ttttgctaaa gatgtaattt ataaagtaga ttggttagat aaagatggtt ttgtgctaag
     4621 agatgtttta aatgaggact atcaagccct tagaattcca gcaggacaag aggtaattct
     4681 tcgtaaactt gcatctgata caagagcgaa tgattttaga ttagaaatta aagcaaaaaa
     4741 ttaatctcat tttaggaagg ataaatcatg aaaaaaacaa aaattttagg aacagctctt
     4801 attggagctt tgctttttag tggttgtgcg caaacagctt atacagatgg aaaggcaagt
     4861 caggtaaaaa aaggcgatgc tttaaccttg ggtcttgata gacaagattt tgaaagtgca
     4921 gctgaaacta tgataaatag tatgttaagc gatcctgctt ttgcaaatat taaaccaggt
     4981 acaagaaagg ttattgctat tggtagggtt gtgaatgata ccccgcaaag aatcgatact
     5041 gaaaaactca ccgcaaaaat cacttctgca ttaagaaaat caggtaaatt tgttctaact
     5101 tcagcagttg ctgcaggcgg agcacttgat agcatgagtg aagatgtaag agaattaaga
     5161 gataatgatg agtttaatca aaaaaccata gcaaaaaaag ggacattggt atcgcctgat
     5221 ttttctcttg cgggtaaaat tagacaagat aatgtaaaac ttagcaatgg taaaactcaa
     5281 gtagaatact ttttcttact aagacttact gatttaacat caggtttagt ttattgggaa
     5341 gatgaacaaa ctattgataa aaccggttct agtaaatcag ttacttggta aaataaaaat
     5401 taatttatga ataaaatttt ttagctcaag tgtttagctt gggctttttt tatgattttt
     5461 aaaaggatac gaaatgaaaa aaatattatt tatcggctct ttagttatgg caagtttact
     5521 ttatgcacaa ggttcccagc ctgtagaaat tacacaacaa gatataaata ctcaaaatga
     5581 aatgtctgac gcaagtacta aggatattac cccaaaatca attgaagatt tttttgaaga
     5641 atttgcggat aatttcggta tagaatatgg tataaccaaa gatggaaaaa ctttttatac
     5701 aggaaaaagt actgttgctg taaatgatac tgatccacaa tttgcacaag ctttacaaaa
     5761 tgcttaccaa aaagcaatgt taaatttgca aagcgaattt ataagagatg cttttggaag
     5821 aattgctaca agcaagattc aaaattatga agcagataat tctacgaatg ctaaggaatt
     5881 tgatgaattg ccaaaaggtg ataaggttga tcaaatttta aataaactta cacaattagc
     5941 tggtgctcag cttgataagg cattaaaaga tttaggtata gatacaaatt ctttaagcga
     6001 agacagaaaa aagactttat taaagcaaga atttcttaat aaaactatga caaatgccat
     6061 aggttctatg agtggacttg ttcctgtgca aactatagtt acacaaagaa gaggtgagta
     6121 tgatgtaggt gttattgctg ttatttccaa taaaactcgc caattagcaa aagatatggc
     6181 actagcaaga cagagtgcta ttaagggtaa aggcaaggca ataagtgagt atctgccaaa
     6241 agatacaaaa ggctttttaa atgaatatgg aattcgctta gtttatgatg aaaatggtgc
     6301 acctattatt ttaagttatg gaaactgggg ttatgtagca gatcctagca atgctaaaaa
     6361 aacaaatatt ttagaagata gagccaaaga aacagcactt actatggctg atgctgctat
     6421 tatagagttt attaatacaa atttaagtct taaagatgaa agaacaactg gtgatactta
     6481 cgaggaaatc atcaaacaaa gtattaatgt taatgatagt tccactcaag aacaaactca
     6541 aaacataaca aatattattg acaaagtaaa tagtaaaata aaagcaagcg caagcggtaa
     6601 aattcgtggt attcgtactc ttaaaaaatg gagctataca agtgaaaatg gtattgaaca
     6661 tgtaggagct gtgagatttt attcttatga aaatttagct aacacaaatg aggctttaaa
     6721 ttcaaagtca aatgcaacaa aaaatgaagc taaaaaatct tctagcatac aaagaagttc
     6781 taatgttgta aatagcatgg atgattttta aaggtaaaag atgaaaataa ttaaaattct
     6841 ttttttaggc ttatttttaa gcctaagtct taatgctaaa gttataacca caacttcaac
     6901 aaaatcaagc acaggtgaag gcacaggctt gactagggaa gatgcgataa acaatgccat
     6961 tatagaagct ataggaaaaa tgagtggagt aagcatcaat tctcttaaga aatctaacac
     7021 tagcgtttca actgataatt caggttcaaa tatacaagat aattacagcg agcaaatttc
     7081 aaaagccacc aaaggtagag ctgatactta tgaaatcaat agtgttgaac aagatgcaaa
     7141 tggtaaatat acagccaatg taacgatttt taaaaccaca acaacaaaaa agtatcaagc
     7201 tccaggttta agtgcagata atagaagaag tattactgtt tttgattcta ctccagatgc
     7261 tgcaaaaaga ggtataggct cagctttgca acaaaaaatc atttctgatt tattgcaaag
     7321 tcgtaaattt aatgttttag accgtgattc tagtggctat tatgaaatgg aaaaagcttt
     7381 aatcaaaagt ggcgacgcag ctagcgatga agtttataaa cttaaaaata tgttagcaac
     7441 agattatatt ttattgtttt ctatttcagg acttgaaggt aaacaaaaaa caagcaattt
     7501 aacaggaaaa agcaaaactg aaattgaagt tatcgtagat tatcgtgtgc ttttatttgc
     7561 tacaagacaa attaaatttt ctaatacttt aagcatgaaa gtcaatctta aagacaatag
     7621 tcttagtgcc aatgaaaccg cactcaaaca aattgcaaat cgtatagcag gagatatttt
     7681 aaacgcaatt tatcctttga aagttgcaag tgttgaaaac aatgaagtaa tattttctca
     7741 aagcttaaat caaggtgatg tttatgaatg ttttgctctt gggaaggtta taaaagatac
     7801 ttatacaaaa gaaaatacag gaagagtaga aagcaaaaca ggaagtattg aaatcactcg
     7861 cacaagccct aaattttctt atgcaaaaat cacagaaggt agtgtaaaag tgggcgatat
     7921 ttgcagacct ttaagtaata ctggtagtgg aaatggctac actataggtc gtgatgcaaa
     7981 ttatcaaacc caagaaggcg gcggagtaaa tctaggcttt taaattttta gagtttgatt
     8041 tttctcaaac tctaaactct ttcttaaatt catcaaaaat taaagaaaaa ttttgtaaaa
     8101 tcgaaatttt attaaaccac taaagctttt aaatccgtta ttacggtgct ttatggtact
     8161 accaatttat aaggaaaagc aatgtatgct attatcaaac acagcggaaa gcaatacaaa
     8221 gtaagtgttg gcgatgagct aaaactagat cactttgaag ctgaaagcaa agcaagtatt
     8281 gaagtaagcg aagttcttgc tatcaatgat aaagaattaa aggtaggtgc gcctttcgta
     8341 gcaggtgcaa aagttgtttt ggaagtgatc aatcacggaa aagataaaaa agttgtgatt
     8401 tacaaaaaaa gacgcagaaa agattctaaa ctcaaacgcg gttttagaag acaatttact
     8461 cgcgttgtag taaaagatat caaagcttaa ggagtaaaga atggcacaca agaaaggtca
     8521 aggttcaact caaaataacc gcgattccat aggtcgtcgt ttaggtgtta aaaaatttgg
     8581 tggcgagttt gttagagctg gaaatatcat catccgccaa agaggaactg caactcatgc
     8641 aggtaacaat gtaggcatgg gaaaagatca tactatcttt gctctaattg atggttttgt
     8701 aaaattcgaa agaaaagaca aagatagaaa aaaagtttct gtatatcctg cataagtttt
     8761 taggacgctt tttagcgtct tgaaaacttt aaatttataa atttaacttc ttttatttac
     8821 tcaaatttag ctttataaat ttaaagtcaa aggcaattta aatgtttatt gatagtgtta
     8881 aaattacttt agcttcaggc gatggtggca aaggtgctgt aagttttcgc cgtgaaaaac
     8941 atgttccact tggtggccct gatggaggag atggtggaaa tggtggtgat attattttcg
     9001 tatgtgataa taatacccac actcttgtaa atttcaaagg caaaagagaa ttacgcgcgc
     9061 aaaatggtgc tggtggaatg ggacgcaata aaaatggcaa aaagggtgaa aatttagaac
     9121 ttatagtgcc cgaaggaacg caagttatcg atgcacaaac caatgaaatt ttacttgatc
     9181 ttaccaaaga aggacaaaga gagctttttt taaaaggtgg aaaaggtgga cttggcaaca
     9241 cccattttaa acacgccacc aatcaacgcc ccgattacgc acaacctggt ataaaaggag
     9301 aaagtcgctt agtcagactt gaacttaaac ttattgccga tgtagggctt gtgggctttc
     9361 caaatgtggg aaaatctact cttataagcg ttgtttcaaa tgcaaaacct gaaattgcaa
     9421 attatgaatt taccaccctt actccaaaac ttggacttgt agatgtaaat gagtataatt
     9481 cctttgttat ggctgatatt ccagggatta tcgaaggagc aagtgggggt aaaggcttag
     9541 gacttgcctt tttaaagcac atagaaagaa cgagcttttt acttttcgtg ctagatccta
     9601 tgaggcaaat gcctttaaaa gaacaattta tagtactaag aaaagaactt gaaaaatttt
     9661 ccaatgaact ttttgggcgt aaatttggca tcatgatttc aaaaagtgat agtgttcgtt
     9721 taggagagga atttgctgag caaattgctt taaacattaa tgagttagac aattatctca
     9781 aagaaataaa taatccacaa agctttttaa tcaaagtctc aagccttgaa aaaacaggac
     9841 ttaaagaact taaattcatg cttttagaag aaattaaaac tttaagaaat aacaaaaaaa
     9901 aatttaacaa tctaggaagt gttttatatt aaaaatttca aacactccct attttttcaa
     9961 aaataactag tttatatgaa attttggcta aaattataaa aatttttcaa ggaataagca
    10021 tgaaaagaat agttgttaaa gtgggttctc atgtgattag cgaagaaaac actttaagtt
    10081 ttgagcgtct taaaaattta gtcgcatttt tagctaaact catggaaaaa tatgaagtaa
    10141 ttttagtaac ctcggcggct atttcggcag gacacaccaa actagatatc gatagaaaaa
    10201 accttattaa taaacaagtt ttagctgcta ttggacaacc ttttttaatc agtgtttata
    10261 acgagctttt agccaaattt aacaaactag gcggacaaat tttacttaca ggcaaggatt
    10321 ttgactctag aaaagctact aaacacgcaa aaaatgctat cgatatgatg ataaatttag
    10381 gaattttgcc tattatcaat gaaaatgacg ctacagctat agaagaaatt gtctttggtg
    10441 ataatgatag tttaagtgct tatgctacgc atttttttga tgcggatttg cttgtgattt
    10501 taagcgatat tgatggattt tacgataaaa atcctagtga atttagtgat gcaaagcgtt
    10561 tagaaaaaat cactcatatt aaagaagaat ggctacaagc aaccataaaa acaggtagtg
    10621 agcacggaac aggtggtata gtaaccaaac ttaaggcagc taaattttta cttgaacaca
    10681 ataaaaaaat gtttttagca agtggctttg atttaagtgt ggcaaagaca tttttattag
    10741 aagataaaca aataggtgga actttgtttg agtgattaat ttattaaatt ctcttttaaa
    10801 atcaaataag ctataattaa aacttttaat ttcacacaaa gcgaaaaaat gaaaaaaatt
    10861 atttttatgg gcactccatc ttacgcaact tgtattttaa aagcactagt agaaaatgaa
    10921 aattttaaac tcgtagcact ttttactcag cctgataaag ccgtaggtag aaagcaaatt
    10981 ttaactccaa gtgatactaa ggctttttta agtcaaaatt atcctagtat tcctattttt
    11041 actccaagtt ctttaaaaga taaaaatatt ataagagaga ttaaggattt aaatcctgat
    11101 tttatcgtgg ttgctgccta tggaaaaatt ttacctaaag ccattttgga tttagcgcct
    11161 tgtgtgaatt tgcacgcttc tttacttcca aaataccgtg gtgccagtcc gatccaaagt
    11221 gcgattttaa acaaagatga aaaaagtgga gtttgcacca tgctcatgga agaagggctt
    11281 gacacaggtg ctatacttga aagcttagaa tgtgatataa aagataaaaa ttcaagtgaa
    11341 gtttttgaac ttttagcaaa tttggccgct aagatcatcc tctctactct tttaaatttc
    11401 gataaaatca cccctaaaaa acaagaggaa agtctagcaa cactttgtag aaaaatcaaa
    11461 aaagaagatg ggcttataaa tttgcaaaat gcaagagaac tttatcaaaa atatctagct
    11521 ttcacccctt ggcctggagt tttcttggaa aatggactta aattcttaga acttgaactt
    11581 gtggatgaat taaaacaaaa tgctaagatg ggtgaaattt tagaattaga aaaagaaagt
    11641 tttttgcttg cttgcaaaca aggagttttg cgtattaaaa aacttcaaga aagtggaaaa
    11701 aaagctcttg atggtaggac ttatttaaat ggaaaaaggc ttaaaagtga agatagtttg
    11761 tgttgaaagt atagactcaa ctcatctttt tttatgcaag caaatacgca atggaaagat
    11821 tgatgaaaat tttgctattt atgctttaga acaaataaat ggagttggaa gtagggaaaa
    11881 ttcttggcag agctctaaag gaaatttaca tctttctttc tgtattaaag aagaagactt
    11941 gccaaaagat ttacctttag cttctgtgag tatttatttt gcttatttac ttaaagaagt
    12001 tttacaagaa aaaggttcta aaatttggct taaatggcct aacgatctat atttagatga
    12061 taaaaaagct ggaggggtta taagtgctaa aatttcaaat tttatcatag gcggtatggg
    12121 tttaaatctg aaatttgcac cccaaaatac agctttatgc gatatagaaa tttcgcttaa
    12181 agatttagtg agtgagtttt tgcaaaaagt agaaaaaaaa attttatgga agaatatttt
    12241 tagcaagtat atgttagaat tcgaaaaatc aagaaaattt agcgtccatc atgaaggtaa
    12301 agttttttca cttgaaaatt cttttttgta tgaagatggt tcaattttac taggcgataa
    12361 aagggtgtat agtttaagat gagcgaaatt attacaatag caaatcaaaa aggtggagta
    12421 ggaaagacta caacagcagt aaatttagcc gcttctttgg ctgtggctga aaaaaaagta
    12481 cttttgattg atgttgatcc gcaagctaat gcgactacag gacttggttt taatcgtaat
    12541 aattatgagt ataatattta ccatgttttt ataggaagaa aaaagctttc agatattatt
    12601 ttaaaaacag aattgccaca acttcattta gctccttcaa atataggtct tgtaggtata
    12661 gaacaagagc ttgctaaagg tgaaaataat gagaaaaaaa tgctgcttaa aaatcaaatt
    12721 caagaagtga ttgatgagta tgattttatt attattgatt ctccgcctgc tcttggaagt
    12781 attactataa atgcttttgc agcaagtgat agtgtaatta tccctataca gtgtgaattt
    12841 tatgcgctcg agggtgtagc tatggtttta aatacaatta aaattatcaa aaaaactatt
    12901 aattctaaac tcagggttcg tggattttta ccgacaatgt atagctctca aaataatctt
    12961 tctaaagatg ttgtagatga tttgaaacaa aattttaaaa aacaactttt tactattaat
    13021 ggaaacgaag atgactttat tgtgatccct cgcaatgtaa aacttgcaga aagtccaagt
    13081 tttggaaagc ctataattct ttatgatatt aaatcaccag gttctgttgc ttatcaaaat
    13141 ttggcgtatt ctatattagg ataattataa tggggttaaa taaagatagg ggtttaagta
    13201 gtttaatcag tgatatggat actgtttata gtaaagaatt gggttttgat aaaaatcaaa
    13261 gcactatgat agaaattgat caaatttcac ccaatccatt tcagccaaga aagaattttg
    13321 atcaagaagc tttagatgaa cttgctaatt ctatcaaaga atttggactt attcagccta
    13381 ttattgtatt taaaaaaaat aataaattta ttttaattgc tggggaacgt cgcttaagag
    13441 cagtgaaagc attaggaaaa aaagaaattc tagcttttat tgctgatatt gatgagaata
    13501 agcttagaga attggctctt attgaaaata tacaaagaga gaatttaaac cctattgagc
    13561 ttgctaattc ttataaggat ttaatgcaag ttcataaaat tactcaagag aatttagcag
    13621 aacttattca taagtctcgt actcaaataa caaatacttt aagacttctg aatttagata
    13681 ttagaactca agagttgatt gcttctggaa aaatttctca gggtcatgct aaagttttgg
    13741 ttggtttaga tcaaaaagat gaaaaaatgt tggttgatag cataataggt caaaaactta
    13801 atgttagaga tactgaaaaa atagttaaaa aaataaaaaa taatgaaagc ttacctaatc
    13861 aagaatttga agatgaaata aaaaaattaa aacaaatact aaatcgcttt ggatttgact
    13921 gcaaaaataa aaataatgat tttgtaattc atttagaaaa tattgataaa attaaaaaat
    13981 taatcaaaat gcttgaaaag ctttaaccaa aatcttagct tttttatggt aaaatagtcc
    14041 ttcaaaaatt ctaaccaagg agaattatgt ttgaagatat gcatccttcc ataatgcttg
    14101 ctactatggc tattttttta gctatgatag ttattttaaa tagtatgctg tataagccgc
    14161 ttttaaaatt tatggatgaa agaaatgatt ctataaaaaa tgatgagaat aaagtaaaag
    14221 aaaattctca agaagtttta ggtgtgaatg atgaattaga agctattcat attaacacta
    14281 gagaagaaat tcaaaaaatt aaacaaagtg ctatagctgc tgctaaagaa gaggcagagc
    14341 aaattcttag aagcaagaaa gaagaattag aaagaaaaat ggccagtttt tatgcagatt
    14401 tagccgttca aaaaaaagag ttgcaagaac atttaaacat acatttatct gagcttaagc
    14461 aagctttgca aaataacata aagaaaattt aagaggagag aaatgagtaa gttattcttt
    14521 attatatttt tgctaccttt gtatgctttt ggtgcatcaa acggtagtgg agaatatgat
    14581 attattccaa ggactattaa ttttctaatt tttgtagcta tattgtatta ttttgttgca
    14641 actccattta aaaattttta caaaaaccgt attgtaaaaa tttcttctaa acttgatgaa
    14701 attcaaaaaa aacttttaga aagtaaagct aagaaattag acacgatgaa aaaacttgaa
    14761 gaagctaagg caagtgctgc tgccgcttta attacagcaa aaaaagaagc tgaaatttta
    14821 gttcaaaata ttaagaaaga gactcaagat gagttagatt tacttcaaaa acattttgag
    14881 gaacaaaaag attatgaatt tagaaaaatg gaaaaagaat tagtatcaaa tactttaaat
    14941 gaaatttttt ctgatccaaa tatgacatta aaacagagtg aaataataga acttatgatg
    15001 aagaaggtat cttaaatatg gaaaatataa ttgcaagaag atatgcaaaa gcgatagctt
    15061 caagagctga tataaatgat ttttatcaga atttgtgtat tttaaattct gcttttgttt
    15121 tgccaaaatt taaaaatatt atagaatcta atgagattaa aaaagaaaga aaaatggaat
    15181 ttcttgattc tttttttgat attaaaaatt ctagttttca aaatttttta agacttttga
    15241 ttgaaaattc aagattagaa tgcattcctc aaatagttaa agaacttgaa agacaaaaag
    15301 cttttaaaga aaatattttt gttggtattg tatattctaa agaaaaatta agtcaagaaa
    15361 atcttaaaga tcttgaagtc aaacttaaca aaaaatttga tgcaaatatt aaactaaata
    15421 ataaaatcag tcaagatgat agtgttaaaa tagaattaga agaattaggt tatgaacttt
    15481 ctttttctat gaaagctctt caaaataagc taaacgaata tatattgaaa attatctaag
    15541 gagaaaaagt aaatgaaatt taaagctgat gagatcagtt caataatcaa agaaagaatt
    15601 gaaaattttg atttaaatct tgaaattgaa gaaacaggaa agattatttc tgtagctgat
    15661 ggtgttgcta aggtatatgg acttaagaat attatggctg gagaaatggt agaatttgaa
    15721 aatggtgata aaggaatggc cttaaacctt gaagagtcga gtgtaggtat tgttatactt
    15781 ggaaaaggag aaggtttaaa agaaggtgct tctgtaaaaa gacttaagaa attacttaaa
    15841 gttccagtag gtgaggcttt gattggccgt gttgtaaatg ctttaggtga gccaattgat
    15901 gctaaaggtg tgatcaatgc taatgaatat cgttttgttg aagaaaaagc aaaaggtatt
    15961 atggcgagaa aaagtgttca tgagccttta catacaggaa ttaaagctat tgatgcgctt
    16021 gtgccaattg gtcgtggtca aagagagctt atcataggtg atagacaaac aggtaaaact
    16081 actgttgctg ttgatactat tatatctcaa agaggtcaag gagttatctg tatatatgtt
    16141 gcaattggtc aaaagcaaag tacagtggca caagtggtta aaagactaga agaacatggt
    16201 gctatggaat atactattgt tgtaaatgcc ggtgcttcag atcctgcggc tttacagtac
    16261 ttagctccat atactggtgt aaccatgggt gaatttttta gagacaacgc aaaacatgct
    16321 ttaattgttt atgatgattt gagcaagcat gctgtagctt atcgcgaaat gtctttgatt
    16381 ttacgtcgtc ctccaggtcg tgaagcttat ccaggtgatg ttttttacct tcattcaaga
    16441 ttgcttgaaa gagcaagcaa gctaaatgat gaattaggtg ctggttcttt gacggcattg
    16501 ccgataattg aaacacaagc aggagatgtt tctgcttata ttccaactaa tgttatttca
    16561 attacagatg gacaaatttt cttagaaact gatttattta actcaggaat tcgtcctgca
    16621 attaatgttg gtttatcagt atctcgtgta ggtggggctg ctcaaattaa agctacaaaa
    16681 caagtttcag gcacattaag acttgacctt gctcaatata gagagcttca agcttttgca
    16741 caatttgcta gtgatttaga tgaggcaagt agaaaacaac ttgaacgtgg acaaagaatg
    16801 gttgaacttt taaaacaacc accttattct ccgcttagcg ttgaaaaaca agtagtttta
    16861 atttttgcag gaaccaaagg tttcttagat gatattgctg tttctagaat taaggaattt
    16921 gaagatggaa tttatccttt tattgaggca aaacatccag atatttttga gcaaattcgc
    16981 tctaaaaaag ctttagattc tgatttggaa gaaaaactag ctaaagccat taatgagttt
    17041 aaagcaaatc atttataagg tcttttatgt ctaatttaaa agaaattaaa agaaaaatta
    17101 aaagtgttca taacactcaa aagactacaa atgctatgaa gctagtttct actgctaagt
    17161 taaaaaaagc agaagaagca gctaaaagat caaaaattta tgcacaaaaa atcgatgaaa
    17221 ttttgagtga aatttcattt cagatcaata aaattgttca caatgaagat gatgtgcgtt
    17281 tatctttgtt tcataaaaaa gaacaaatta aaaccgtaga tttaatattt atcactgcag
    17341 ataaaggctt atgcggtggt tttaatatta agactttaaa aacagtaagt gaaatgctaa
    17401 aagaatatga agcaaaaaat attaatattc gtcttagagc tataggtaaa actgggattg
    17461 aatattttaa ttttcaaaaa atagaattgt tagagaaata tttccatctt agttctagtc
    17521 ctgattatga gaaagcatgt gaagtaattc atgctgctgt agatgatttt ttaaatggaa
    17581 atacagatga agtgatttta gttcataatg gttataaaaa tatgattacg caagaactta
    17641 aaattaatca tcttattcca gttgagccaa agagtattga acagactcat aattctcttt
    17701 tagagcttga accggaagga actgagcttt taaaagattt aatgaaaacg tattttgagt
    17761 ataatatgta ttatgcgtta atcgattctt tggcggcaga gcatagcgca agaatgcaag
    17821 ctatggataa tgcaactaat aacgcaaagg caagagtgaa acaactaaat ttagcttata
    17881 acaaagcaag acaagaatcc attactactg agcttataga gattatcagt ggtgttgaat
    17941 caatgaaata gtaaaatttt aaggagaaga taaataatgc aaggatttat ttcacaggta
    18001 ttaggtccgg ttgttgatgt agattttaac gactatttgc ctcaaattaa tgaagcaatt
    18061 gttgtaaatt ttgaaagcga aggaaaaaaa cataaacttg ttttagaagt agcagctcat
    18121 ttaggagata atagagttag aactattgct atggatatga cagatggttt ggtaaggggc
    18181 ttaaaagctg aggctttagg tgctcccatt agtgttcctg ttggtgagaa agttttagga
    18241 agaattttca atgttactgg agatttgatc gatgaaggtg aagaaatttc tttcgataaa
    18301 aaatgggcaa ttcatagaga tccaccagct tttgaagatc aaagcacaaa aagtgagatt
    18361 tttgaaacag ggattaaagt tgtagattta cttgctcctt atgcaaaagg tggtaaagta
    18421 ggtctttttg gtggtgcagg tgttggtaaa actgttatta ttatggagct tattcacaat
    18481 gttgcattta agcatagcgg ctattctgta tttgcaggtg tgggtgagag aactcgtgaa
    18541 ggaaatgacc tttataatga aatgaaagaa agtaatgttt tagacaaagt tgctctatgt
    18601 tatggacaaa tgaatgaacc accaggggca agaaatcgta ttgctttaac aggtttaaca
    18661 atggctgagt attttagaga tgaaatgggt cttgatgtgc ttatgtttat tgataatatc
    18721 tttagatttt cacaatcagg ttctgaaatg tcagcacttt taggaagaat tccatcagct
    18781 gtgggttatc aaccaacctt agcaagtgaa atgggtaaat tccaagaaag aattacttca
    18841 actaaaaaag gctcaatcac ttcagttcaa gctgtttacg ttccagctga tgacttaaca
    18901 gacccagctc cagcaactgt ttttgctcac ttagatgcta caacggtttt aaatagagct
    18961 attgctgaaa agggtattta tcctgcagtt gacccacttg actcaacttc aagaatgctt
    19021 gacccaaata tcattggaga agaacattat aaagttgctc gtggtgttca atcagtgctt
    19081 caaaaataca aagatttaca agatatcatc gccattttag gtatggatga gcttagcgaa
    19141 gaggataaac ttgtagttga aagagcaaga aagattgaaa aattcttatc acaaccattt
    19201 ttcgttgcag aagttttcac aggtagccca ggaaaatata taagccttga agatacaata
    19261 gcaggattta agggaatttt agaaggtaaa tatgatcatt taccagaaaa tgctttctat
    19321 atggttggaa atatagatga agctattgca aaagcggata aattaaaagg ttaatttatg
    19381 aacgatttga ttaatttcga gatagttacg cctttgggtg taatctatca aggagaagta
    19441 aaatctgtta ctttaccggg tagtgaagga gaatttggcg tgcttaaagg acatgctgct
    19501 ttggtttctt ctttaaaatc tggagtaatt gatattgaaa aagctgattt aaaccatgaa
    19561 ttaattgcta ttgatgctgg acatgcaaag gtagatgaag ataagatttg cgtgttagca
    19621 aagggtgcgg tttgggtttg tggaagtgat gaaagtgaga ttgaaaaaaa tcttgctcaa
    19681 gcaaaagatt tgattaaatc tatgagttct gataatgcag ctttagcagc aactttttca
    19741 aaacttgata atgcaaggat gcattaatga attttgaagc tatatttcat tttttcaata
    19801 gttcaagtat tattacttat atagttttat tatggctttc tttatatttt attttagcat
    19861 ttagtatttt gtttgctaga ttgacttatt tggctacatg gagaaataaa gaaaaagaaa
    19921 gtttagaaac tttgctcttg ggtgagaagg atttaagtcg tactgattcg attttaagaa
    19981 aatgtaatga tacaacttca aatcatttag aaatctataa aaatttagca agtcgccgcg
    20041 cttctgctgg acttacttgg cttagtatta ttgcttcaac ttcacctttt ataggtcttt
    20101 ttgggacagt tatttctata cttgaaactt ttggtgggct tggaactcaa aattctttaa
    20161 gtatcatagc tcctaaaatc agcgaggctt tagttgctac aggttgtggt attttagtag
    20221 caattcctgc ttatacattt catctcatca ttaaaagaaa agcttttgaa cttttaagca
    20281 ttattgatag cgagattaaa gttataagtt cgagtaaata aggttaaaaa tgccatttga
    20341 tgatgaaaaa cctgaactta atatcacacc tttagtagat attatgcttg tattgcttgc
    20401 gattttaatg gtaacagctc caagcattac ttatgaagaa aaaattaatc ttccacaagg
    20461 tagtcaaaaa aataccagca ctccaactgt taagagttta attattagta ttaatgcaaa
    20521 aaaagaaatt tttttaaatc aagaaaaata cgattttata agttttgctg acaatcttgc
    20581 tcaaagaaaa gcacaattta ataccgaaga tccggttttt atacgcgctg ataaaagctt
    20641 aaaatatgac gatgttattt cagtcttaag aagtgtaaaa aatttaggat ttaataaagt
    20701 tgctttacag actgaataat catgaaaaat tatggtttga gtaatttaaa ttcgttttta
    20761 cttgctttag caatatatat tagtatagta attcttgttt tttttagact tgtaagcgag
    20821 gttgaacctg ctatacaata tactgatata aaagatagtt ttgtagatat tgaacttgct
    20881 gaaccatcaa aacaagttat tactcaaagc aacactccta aagaaataca aaaaccaaca
    20941 gagcaaattg atatagaaaa gctttttgct cagactacaa ataaaacagt taaaactgaa
    21001 gatattgacc aaaaggcaag taattttaat gagctttttg gaaatattaa agaaatacaa
    21061 gaagaaaaga ctacaaaaat tcaatcaagt gctaaatcag gaatttctag tgccccaaaa
    21121 cctcaagctt ctgaacttgt aaaacaactt aatgatagtt tacttcaaga agaaagttca
    21181 acgcaaggcg aaagcacaaa ggcgcaaaag attggaattt atgatgaatt tttagggaaa
    21241 gttgtgcgta ttatcactca aagatggact cagtattatc caaatagtga aaaaatttct
    21301 gttaaggtaa aaatttttat tgatgaaaat ggaaaatttg gctatacttc agttgaaaaa
    21361 agtgggaatc ctttatatga tgctaaagtg gctgaatttt tagaaagtca aaaaggtaaa
    21421 tttattactt atcctccgca aaataaaaat ataagcatta ccatgaattt aagagatgaa
    21481 gtaaaagtta aaaatgatta ggagaaaaaa atgaaaaaaa ttgtagcaat ttttttagtc
    21541 tttttaggaa gtctttgggc agaagatcca gtgattgatg ttgttaattc tggtgtagtt
    21601 ttaccaaaga ttattgttaa agacaattca aatttaagtg atgagaattt aaagaaaagc
    21661 ttttataata tcattgtgaa cgatttgaaa gtaagttcaa actttgaagt tgttgctaat
    21721 gcaactgaga caagtaatta tatttttgaa tacactttaa ataaaaatgg taacactttg
    21781 agtttaaatg taaaaataaa agctggcggt tctgataagt cagagcaaac ttatacttta
    21841 aatggtttag agcaatatcc atttttggca cataaaagtg tcaaagcttc tgtaaatgcg
    21901 ttaggacttg cacctgttga ttggatggat cataaaattt tgatcgcgag aaattctagc
    21961 tctaaaaaaa gtcaaattat tatggctgat tatactttaa cttatcaaaa agttattgtt
    22021 gatggtggac ttaatttatt tccaaaatgg ggaaataaag aacaaactct attttattat
    22081 acagcttatg atcatgataa gccaacttta taccgttatg atttaaatac caataaagct
    22141 agtaaaattt tatcaagtgg cggtatggtt gtagcaagtg atgtgaatgt agatggaagt
    22201 aaactacttg ttaccatggc tccaaaagat cagcctgatg tttatttata tgacttaaat
    22261 accaaaaatc taacacaatt aactaattat tctggtattg atgttaatgg aaattttatt
    22321 ggctcagatg atagtaaagt ggtatttgta agcgatcgtt taggatatcc taatattttt
    22381 atgcaagatt taaatagcaa tagtgctgaa caagttgttt ttcatggtag aaacaattcg
    22441 gctgtttcga cttataaaga ttttttggtt tattcaagtc gtgaaccaaa tcaagcaggt
    22501 gtttttaata tttatttgat gtcaattaat agtgattata ttcgtcaact tacagcaaat
    22561 ggaaaaaatt tatttccaag attttctagt gatggtggaa gtatagtatt tatcaaatat
    22621 ttaggtgcgc aaagtgcttt gggtgttatt cgtgtaaatg caaataagac tttttatttt
    22681 cctcttaggg ttggaaaaat tcaatcaatt gattggtaaa aatttcaatt ttaggttaaa
    22741 attaattaaa aattagatat aataataaga atttattaac tttgaaaggt cataaatgaa
    22801 aaaaattctt tttacttcaa tcgcagctct tgcagttgtt attagtggtt gtagcacaaa
    22861 aagcactagc gtaagcggtg atagtagtgt tgattcaaat cgtggttcag gtggaagtga
    22921 tggttgggat attgattcaa aaatttctca acttaatgat actttaaata aagtatattt
    22981 tgattttgat aaattcaaca ttcgtcctga tatgcaaaat gttgtaagca caaatgctaa
    23041 tatttttaac actgaagtaa gcggtgtaag tattactgtt gaaggaaact gcgatgagtg
    23101 gggaaccgat gaatataacc aagctctagg tttaaaaaga gcaaaagctg taaaagaagc
    23161 tttaatcgct aaaggtgtaa atgctgatag aattgctgtt aaaagctatg gagaaacaaa
    23221 tcctgtgtgc actgaaaaaa ctaaagcttg cgatgcgcaa aatagacgtg ctgaatttaa
    23281 attatcaaga taattaatga aaaaaatatt cacagtagct cttcttggag ctactttact
    23341 ttatgcagaa agctcagctt ttggtgcagg agatataaca agcaattctt cttatggttt
    23401 aacttcaaat gaaaaattat ttaaagaaaa gttagataat ttaaataatg aaaatataca
    23461 aacaaatgct agaattaatg aaattaacga aagaatcgag ggtttacaaa gcactttaga
    23521 aggtataaat tctcaatatg ccaaatcaaa ttctagatta agtcaagttg aagagaataa
    23581 tcaaaatatt gaaaataatt ttactagtga aattcaaaaa ttaaaggctt atgttgaaga
    23641 aagtagaaaa attcaagaag ctaataataa gcaagtaaaa aaagttttag ccgaacttag
    23701 ttctttagta gatgctatta atgcaaatta tgtttctaaa aacgaattaa atgatgcaaa
    23761 tttaagcgtt aaaactatta cacctagtgt tgttgtttca actacagatt caaatagtac
    23821 cattgaaaac aataatactc aaaataccca agatgataaa gcaaaacaaa ttgatgaatc
    23881 ttggaaaaag aaaaaaaata atgaaatttt agaattagcg ataaaagatg ttgataaaaa
    23941 tgcttttgaa gattccaaag caaaattaaa ttttctcata acaaagcagt ataaacctgc
    24001 aagagcaaat ttttggttag gggagatcga gtataaacaa aaaaattata acaatgctat
    24061 tgtttattat aaaaaaagtt cttctttgag tacaaaagga gattatttcc caaaactttt
    24121 atatcatact gccatttcat tggataaaac aggtgataca aaaacagcaa atggttttta
    24181 taaagcttta aaaactaatt atccaaattc acccgaagca aaagcttcac ctaatagaaa
    24241 ataaattaag gagataaaat ggctatagaa aaaaatagtg tagtttcaat gttttatgag
    24301 ttaaaagatg caaatacaaa tgaagtttta gaatcaaatt tatattctca acctatttct
    24361 tttattttag gcaaaggtca gattttagaa agcttagaag aagaagtgat gaagcttgat
    24421 tgccctagca atgctgatgt ggtaattaaa aaagaaaaag gtttaggcga atacgatgaa
    24481 aatgccgttc aaactttacc aaaagagcaa tttgcaggta ttgatttaaa agtaggtatg
    24541 gagctttttg gcgaaggtga aaatggcgaa accgttcgtg taactgtaaa agaaattggt
    24601 gaaaatgatg tgacaattga ttataatcat ccttatgcag gtcgtgattt gcttttttct
    24661 ttaaatatcg tagatgctag agctgcgagt gaagatgaaa ttcttacagg tattatcgca
    24721 ggaagtcata gttgtggttg tggaagcgga catggacacg atcatcatca cggacatgga
    24781 catggtggcg gcggttgctg tggtggcggc ggttgcggtt gtcattaatg aatgctgcgt
    24841 ttatatttcc aggtcaaggc tctcaaagtc ttggcatggg aaaagatttt tatgaaaact
    24901 ctataaaagc caaagaactc cttcaaaacg caagtgattt ttgtaagatt gattttaaac
    24961 atttgctttt tgaagaaaac gaaaaactca atcaaagtga atttactcaa cccgccatcg
    25021 ttttaaattc cttaatggct tatagtgttt tacttgaaaa aaaacctgat ttaagttcga
    25081 aatttgcttt agggcattct ttgggagaat tttcagcctt agctgtcaat ggtgcttttg
    25141 attttttaga ggctctttct ttggtcaata aaagagggct tttcatgcaa gaagattgtg
    25201 caaaagttga agcaggtatg atggtggttt tggggcttga tgatgaaaag gttgaagagc
    25261 tttgtcaaaa agcacaaaaa gaaaacaagc aaattttcgc tgcaaattat aactgcgatg
    25321 gacaaatcgt tgtagcaggt ttaaaacctg atttagcaag ttatgaaagt gtatttaaag
    25381 aagcaggagc taaaagagct atgcttttaa atatgagcgt ggcaagtcat tgtcctcttt
    25441 tggaaaatgc ttcagctaag ctttgtgtgg agcttgaaaa ggtgttaaaa ccaaatttta
    25501 aagccgtaat ttctaatgca aatgccaaaa tttatacaag caaagaagaa gcccttgagc
    25561 ttttaaaagc acaacttatc tctcctgtgc tttataaaca aagcattaag gcatgtgaaa
    25621 atgaagtaga ttatttcata gaatttggcg caagtgtgct taagggtttg aataaaaaaa
    25681 tcacttcaaa agaaacttat gctttaacaa atatgaatga tattgatgaa tttttaaagg
    25741 ttgtatgatg aaaatagcaa ttttaggagc catgagtgaa gaaatcactc ctttgcttga
    25801 aacacttaaa gattatacga aaatagaaca cgctaacaat acttattatt ttgcaaagta
    25861 taaaaaccat gaacttgttt tagcgtattc taaaattggc aaggtaaatt ctactcttag
    25921 tgctagtgtg atgatagaaa aatttggcgc acaagctttg ctttttacag gagttgcagg
    25981 tgcttttaat cctgaacttg aaattggcga tttgctttat gcaacaaaat tagctcaata
    26041 cgatcttgat attactgctt ttggacatcc tttgggtttt gttccaggta atgaaatttt
    26101 tatcaaaacc gatgagaaat taaacaatct tgctttagaa gttgctaagg aattaaatat
    26161 caaacttcgt gcaggcatta ttgcaacggg tgatgagttt atttgcgatg aagcaaaaaa
    26221 agcaaaaatt agagaaattt tcaatgcgga tgcttgtgaa atggaaggcg caagtgtggc
    26281 tttggtttgt gatgctttaa aggtgccttg ttttatctta agagctatga gtgataaagc
    26341 aggggaaaag gctgaatttg attttgatga gtttgtgatc aattcagcta aaatttcagc
    26401 caattttgtg cttaaaatgt gcgagaaatt atgataaatc ttagcaaaaa actcatacgc
    26461 caagttgcac aagctaatgc taaatttgga cttattaaag atggagatag ggttctttta
    26521 gggcttagtg gcgggaaaga ttctttggct ttagcccatc ttttaaatcg tatgcaagct
    26581 cacgctcctt ttaaatttga acttgaagcg gtaactttga gttatggtat gggcgaggat
    26641 tattctcatc ttcatgcaca ttgtgaagaa cacggcatta aacatagcgt gcttgattca
    26701 aatatttatg aagtttcagg cgataccata agagaaaatt caagtttttg tagttatttt
    26761 tcgagaatgc gtcgtggagc tttatatact tacgctcttg aaaaaggttt taacaagctt
    26821 gctatagctc atcatttaga tgatgcagca gaaagctttt ttatgaattt tattcataat
    26881 ggagctttaa gaaccttagc acctatttat caaagcaaac gcggtataac tgtgatacgc
    26941 cctttgattt ttgtgcgtga aagacagctt agagataatg ctacgcaaaa tgaacttagc
    27001 gtgataggaa atgaattttg tcctggtatg aaactcagtg aaaaaaatgt aaaatttcca
    27061 cacgctagag aagaagctaa acagctttta gcaaatttag aaaaagatca tcctaagctt
    27121 tttacaagtt taaaaaccgc ttttgccaat ttacacacgg agagtttttg gcttcaaaag
    27181 gcataaaagc atgaaaaaag cttttgtttt agtggattat caaaatgatt ttattgatgg
    27241 aagtttaggt tttgataagg ctttaaaaat caaagaaaat attcttaaag ccttaaatca
    27301 aatcgatttt aataacacgc atttgctttt aacctatgat acgcatgatg agcattatct
    27361 acaaagtaaa gaaggtttaa atttacctgt aaaacattgc attaaagaga gtttgggttg
    27421 gcaaatgcca aaggaatttg aacctttttt acaaaaagct cataaaattt tttataaaaa
    27481 tacttttggt agcttagaat tagctaattt catacaaaaa agtgattatg aagaacttca
    27541 ttttgcaggg cttgtttctc atatttgtgt gttttgtaat attattttag cttttggtgc
    27601 taagcctaat gcaaggataa ttttacacca aaatttaagt gcaagttttg atgaaaattt
    27661 agaaaaatcc gcttttgata tacttagggc ttatggtatt gaaattgttt aatgcaaggc
    27721 tttatacttc atactcaaaa agttaaagat gaggatttga ttgtttatat tttaagtcct
    27781 aaaatgctta ttaaggctta tcgtttttat ggacttagac attctagtat tttaagcggc
    27841 tataaaatcg actttgcttt agaagaaaat cctagttttt taccaagact taaagatgta
    27901 ttgcatttgg gatttttatg gattatgcaa agggataaaa tgcttatttg gcaagaattt
    27961 atccgtcttt tatataggca cttaaaagat gtagaagagc ttgatagttt ttattttgat
    28021 ttacttgatg agtgtgtgaa aaggtttgaa aaacaaaatc caaagcgtgt tattgttgat
    28081 gcttatttaa aaattttgga atttgaagga agattgcata aagatttttt ttgttttgcc
    28141 tgtgatgaga aaattcaaaa ttccattaca ttgctaaggg cttttttacc ttcgcattct
    28201 caatgtgctt taggatttga gtttgaagag aaaaaactaa aacaatttta tagtagtaaa
    28261 aattgtgcga tttttgatga tgaagaaata gaaaatttat atcatttgat taaggaaggt
    28321 ttatgatatt aagtgatgaa aaatgtgatt ttttagaatc tatagcaagt tttttaagtc
    28381 ctaaagatgt ggagcttgtc tttgtggata gtaaagaaat gcaagaaatt aacttagagc
    28441 aaagaaaaca agataaaacc actgatgtac tttcttttcc acttgaaaat atcgatgaga
    28501 gtttgccttt gggttctgtt gtgatcaatg tggatttggc aaaagaaaag gctaaagagt
    28561 tagggcatag ctatgaagaa gaaataagct tgctttttat ccacgctatg cttcatttgt
    28621 taggttttga tcatgaaaat gataatggag aaatgagaga aaaagagaaa gaacttatag
    28681 agcattttaa tttacctaaa agtttgattg taaggacttt ggaagattaa gtaagatttt
    28741 tttcaagggc tagaagactt gcgctttata ttttaaatat atgagtaaaa atattaaaaa
    28801 aaatcatttt tgccgattta ctttagaata aaatttattc caaggtgata aagatgatag
    28861 tatttcctct aagctctttt aatagatatt ttggaaacaa tcctttgcaa acacttacca
    28921 aaataagaga tgaaagtatt gaaaatggaa atcccgagct tacaaaaaaa caaagagaag
    28981 aattaggtaa tgatttgata gatttgtata agatttctaa aaaattcagc gataaaatag
    29041 aattagtcga gggttcaata gaagataagc ttagaaacaa tgaattacca gaatcagaag
    29101 ttaaaaattt atttcaatgg atggatgaaa atgctaaaca ccctcgttgg atgcatattg
    29161 atggcgtgag ttatgatgaa gcttatgtta aaatttttca cacaagcaaa agtatagatg
    29221 aatttaaaga aaaatatctt gagcttcaaa aaaaatattt tgttgatttt aacaatattg
    29281 attcatcgca gaaaaaactg caagaaactt cagaagaaga caaaaaagct ttcaaaccta
    29341 tacaagtaga aagtaaaagc gaaacctaca aagatgataa taaaatgaat gagcttttaa
    29401 gaaaactact agaaactaaa tttggcacaa gcgatgagct agaaattctt tttggtatga
    29461 attttagcaa tgataatgca ggggaattta ataaaattct ttctcaaaac acttcagcaa
    29521 aaattataga tattaaggct taagattttt taaattataa aaatcaatca agttaaacta
    29581 aaaaattctt ctattttttt tcgcatttct tcgacattgt cgatacgatt aacggtatct
    29641 ctaaaggctg aagcgtcttt atgcccttta gaatactcgt gtaaatgctt gcgaaatata
    29701 cttacgcctt gatctttgta gtgttttatc atttcatcaa aatgagtgag tatgatttct
    29761 tttttgagtt tttcatctac acttttaccg cttttgattt cataaaatat ccaaggattt
    29821 cctacgcttg cacgccctat catgagtcca tcacattttg tgattttata aacttcttta
    29881 gcgttttgtg cgttaatatc gccatttgca atcacaggaa tttttacact cgctttagca
    29941 ctagcaatgg atccataatc ggcttttccg ctataaagct gttttcttgt gcgtccgtgg
    30001 atacttataa aatccacccc caagctttca caaattttag ccattttttc aggatatttt
    30061 tcattaaatc ctagtcgaaa tttcacactt gtaaggcttt ttttattgtt ttctttaatc
    30121 actcctacaa gatttttaaa aagctctaaa ttttctagca aagcactgcc agcacattgt
    30181 ttaacaactt tatttacagg gcaaccgcaa ttaaaatcga tcccatctac aaaatccatt
    30241 tcatttagca tttgcactgc tttttttagc acttctttat ctccacctgc aatttggact
    30301 atataaggat tttctaattc agctctttct agcatatgta aagttttaga actttcataa
    30361 actaaggcat tagaacttat catttcactt atggtaatat cagcaccaaa tttttttact
    30421 acattacgaa aaggcagatc tgaaaaacct gccatagggg ctaaaaacag gggttttttg
    30481 ctaaaatcta tcattgtatg agttgattta gatcgatttt gatatttttt tcacgcaagg
    30541 ctaaaaaggc tttaaaatca ttaaattttt tatcatcatt gtgaatttgt tctcttaact
    30601 catctaaaag tccaaattca gccaaaagat ataaatatgc tcttaaagct tcgctttttt
    30661 catttttaat tttgttaaaa attcctaaaa tagcatcagg atttaaaagt ttagtactta
    30721 gttttgctgc gttaagatag tctttttcgc ttaatatgtt gtgtgaaagt aaaacttcat
    30781 attctgctac actaagttct aaatttcctt ctttaaaacg cttgataagt gtgagaactt
    30841 cagaaggctt tttagggatt tttacatttt taatttgctc ataactagct ttttctataa
    30901 gagtgttaaa agcaatttct tcaaattcat ctttgatttc attaaggttt ttaagtttgt
    30961 tataggcata atttgcatca tttttgagat gatttttttc attttgcaaa tataaaacat
    31021 tgttattttc gagtttaaat ttgctaaggt taaaaaattc gtttttattt aaaccatcaa
    31081 taagatctaa aatttcattg attttatttg agtgtggaat tttttcatgt gtttttatgg
    31141 ttttaaaaag ttgtgctaca gatctaaatt cttttgtttg aaaagtggtt ttaagatctt
    31201 tttcaaggag taaatcttga gtataagctt caaatttagc tgcatcttta aaaaaatgct
    31261 taaattttaa ataacgcaaa aatccataaa atgctatgtg taaaacggct aaaatcatat
    31321 aaataaataa aggaataaca agccatatca taataggtag ttcaaaggta taagtgctga
    31381 tatttagagt atagcttcct agttctagat gccaagcaaa ggcaaaaata agtgctatat
    31441 aaataaaact tgcaagtaag aagagtttaa ttttcatgtt tttttccttg ttctgcaatt
    31501 tgacggcaag tgatacaata tcttgcgtga ggtttgactt ttagtctttg agagtcgatt
    31561 tcatcatcgc aagattcgca aattccataa gtgccgtttt tgattttatc taaagaatct
    31621 tcgatttcta taagttcttc tttgagattg gtgctgatag caaagtcaat ttgagagcct
    31681 gtttctatga cagaaaaatc tacactatcg cttgggacgc tattgtgaag agcttcgatt
    31741 tcatttgaat tgctttgcaa attttctaag atggcttttt ttctttcttc taaaatattt
    31801 ttgaaatttt gtatttcatt ttttttcatt ttaaaacttt ctatttgtga taagggtgat
    31861 tgttgttgat gcaaaatgca cgataaattt gttctaaaag taaggtttta acaaattgat
    31921 gtgctaaagt aagtttgctt aatgatagtc taaaatccaa actttgatta aattcttctc
    31981 ttaaaccata agcacctcct ataaaaaaac ttaattcatt tttatcttgg atgagttttg
    32041 caaattctat acttgtaaga tctttccctt tttcatcaag agcgatacaa tagccttttt
    32101 tataaggcat aaaagcttct tcatagcttt tttttgcttc tatggcattt aaattttgag
    32161 ctaaggctat ttttttatta aaaacattta tttcttttaa agtggcgtat ttggagatga
    32221 gtttagagta tttctcacta caagttttaa attcatcact tttttgaata caaaagatat
    32281 taacttgcaa attattttcc actaaaaaat tttagtacat cgctaagata ttgtttttgt
    32341 tctcctcttt caactatggc atctataagt ccatgttcta acaagaactc tgctttttga
    32401 aaaccttcag gtaaatctgc tcctatagtt tgtttaataa ctcttgcgcc agcaaaacct
    32461 actaaagctt caggttcagc gatgattaaa tctccaagcc aagcaaaaga agcacttact
    32521 ccacccatag taggatcggt taaaatgcta atataaggaa gtttttcttt gctaagaagt
    32581 ttaagtgcag cactagtttt gctcatttgc atcaaagaat aagtactttc ttgcattcta
    32641 gctccaccgc ttgcacttac gatgacaaga gaagttttgc ttgtgatagc tctttgtata
    32701 gctctaacaa ttttttctcc ttcaacagaa cctaaagatc cgcccataaa agaaaaatca
    32761 aatacaacaa gttgggtttt taaaccattg atttcacatt ctccactgat gacagaactt
    32821 tttctacctg ttttactttc accttcgcta aggcgttttt tataggattt gctatcaaca
    32881 aattttaaag gatctatagc ttctaaattt gcatcatact caataaaact gccttcatcg
    32941 cttaaaagtt taatacgttc atcagctgaa attctcatgt gataattgca tttaggacaa
    33001 acattaaaac aagattctat ttctttataa tacatcaaag catgacaact ttggcacttt
    33061 acccagtgat ttggcgcttc tttaacgcta ggttgttgtc ttcttatttt tgaaaaaata
    33121 tctgcaaaat tcatatattc acctaattat tttttaaaaa ttctaagatt atatcaaaaa
    33181 tttttttgtc ttggcttagg agaaggaaat tttcattttt ttctatatat aaattttgat
    33241 gaattgctaa agcagctgct gtatcaaaaa ttcgtgtttt tccaagaatt aatacaaaac
    33301 taaaatacga agcataagca agacttaagg ctgttgcacc caaagagcga aattttaatt
    33361 gattttttgt taaaaaatcg agaagttctg gataaagtga aattttttca actataccta
    33421 ttttagaaaa tagattaggt gttaagggtg agtattttgg atcggaaaga ttggatttaa
    33481 aagcttgttt gttattaaaa gcaaaaattt cttgactgac aagattgcaa acaaaagcac
    33541 tttttgcctg atctttttcc ataagagcta tagaagttcc ataaaatggt attttagaaa
    33601 caaaatttga acttccatcc aaaggatcaa gaatcatttg ttttgggcta gcttttccga
    33661 tcaatccgct ttcttcagaa aaaatttgtc caaaacaact aagatatttt atgaaaattt
    33721 gttcacattt taagtcaagc tcatagcctt gatttttatc atagcctaat ttagagcaaa
    33781 gtttaagatc attttgtggg atattgttta gatacttgcg tatttgcaaa tttgcattca
    33841 agcaagcatc taaaaattct ttcattaaaa gcgtgttcca agattaaatt caaaactatt
    33901 agtatcatca ccttttttat cattaagagg tttggcaaat acaagttgta aaggtccaat
    33961 aggtgtaatc cattcaatgc ctatacctgt actcattctt tttatttcat ctaaattttt
    34021 acgccctatc ataccataat caaaaaacac gctaccacga agtttgattc tatcaatcaa
    34081 aggaaaacta agttctacgg aattggcaaa agctatggtt ccgcctattt catctcccca
    34141 ttgattttta ggacttactg ttctgctttc aaaaccgcgt atcgatctaa taccacctaa
    34201 ataaattctt tggttaattg gtaaataacc ttcatcccat actttataaa aactcgcttt
    34261 atagcgataa ataagatcat atcctatata gtcttgcaaa ccttgataaa agttaaattt
    34321 agagcttgat gaaataaatt cttgatctcc gccaagtcca gcgtattcta aactagttga
    34381 agcaataata cctgatcgtg gcagataata atcatctgta tcgttaaagg tgattgctgg
    34441 agttatagag cttttaatac ttttgccaag ttcatatcct gttcttaaaa gagttggact
    34501 taagtgatat atatcgcttt gttcaagatt ataagttaag cttacattat agtatcttgc
    34561 aaattggcgt ccaattgtta tatcaaagcc gtaatttttt tctgaataat tatcccattc
    34621 atagtcattt gaataaagtg ttccacccag actatattga ctatcaagaa cgcgtggatt
    34681 tacgagacta atccttcccg ataaagtatc atcgctttta tctacgctta cagagctttt
    34741 tattcctgaa ccaaagatat ttgtatccga taaagaagcg ttaagcaaaa taccatcgct
    34801 tgatccatag ccaatgcctc cagaaatagc tcctgtagaa gcttctttaa catcaacaat
    34861 caaatcaata tgtgtatcat caactttttc ttctttgata tttacatcgt caaaataaga
    34921 agttcttttt aaagcatttt ttgactcgct taagtctgtt ctattgtata aattaccttc
    34981 tgttatatat aattctcggc gtatgacgcg atctacggtg cgtgaatttc ctgaaataat
    35041 aacatttctt atataaactt tatcgtgagg gattacttta aatacaacgg tggcttcttg
    35101 agtttgatca tttttttgaa tatcaggata gacttctaca aacgcataac ccaaatcagc
    35161 actttgtgtt tctatggttt taacatcttt tctaatgtct tcgatattga tagttttgcc
    35221 agcgcttgat cttaaatctt ttacggtttg tgcattttgc ttatcatcaa ataaaggatt
    35281 ttctatgctt atacttttaa ttttataagg ctttccttct ttgataaaat aagtcaaatt
    35341 tgcttgataa gtatctgtgt aggttttaag ataaggggag gatacttgaa catctaaata
    35401 tccttttttc atatattcat cagcaattct tgaactatcg ttactaagtt caaaaacttt
    35461 taattttcca tcattgcgtc cccacatcca tcccataaat tctttttctt tgttaacaac
    35521 agcaggttct atatcagaat atgaaaattt ctttgctcca cttaaatgaa cattatcaat
    35581 aatgatattt tcaccacgat ttactataaa ttcaagctct agtccatcag tattttctaa
    35641 agtctttttt ttgtattcta caatagtatc aaaataactt tttgcttcat aataagcttt
    35701 aatgcgttca atagcttctt ttatacttcc ttcatcaagt agtgtacctc ttttaatccc
    35761 taaaatactt tcaacttgtt ttctatcatt ggaagctata cctgttatac taacctttgc
    35821 tatagttggt ttttcagtaa ctataatttc caaaattcca ttgttgtttt ctactgcaat
    35881 attttcgaaa taattttgtt tataaagatt aagaatagca gtgttgattt ttgcaggatt
    35941 tatttcctcg cctattttaa gccccgcgat atttatagcg cttgtgttcg ataaatgatt
    36001 taatccgata aatttaatat ctttaatggt tgctgcattg gccatagcaa ctaaagcaca
    36061 aatactaata agatgttttt tcattgattt tttacctaaa gctttattaa aagctgtata
    36121 atagcaaaaa aaatttaaca aaaaaactaa ggtagaaagt atgaaaatag caattatagg
    36181 gcttgggctt atgggtggat ctttagggct ttgtttgaaa gaaaataagc ttatttcttg
    36241 tgtttatggt atggatttaa tcaaagaaaa tgaaaaagat gccctgcaat taggtcttat
    36301 tcatgagctt atagaattta aagatttagc tttatgtgat atgatttttg tcgcaactcc
    36361 tgttgatgct attatagaaa ttttgcaaaa gttagttgat ttgccttcta atgtaacaat
    36421 tatagagctt ggaagtacaa aaagaaaaat tatagaaagt ttgcctaaga atttaatcaa
    36481 acaaactctt tttgctcatc ctatgacagg aactgaaaat tcaggtccaa aagcagcttt
    36541 taaagagctt tataaagatg cagtttgtgt tctttgtgat agtgaaatag ctgatgattt
    36601 acatcaaaaa agagcggtag aaattttttc tcatttaggg atgaaaattg tttttatgga
    36661 tagtaaagcc catgatcatc atgctgctat tatttctcat ttgcctcatg ttataagttt
    36721 ttctttggca aattttgtaa tgaaggaaga agataaaaga aatattgttc atttagccgg
    36781 aggatctttt aaaggtatga gcagaattgc caaatcatcg ccacaaatgt gggaaagtat
    36841 ttttttacaa aataaagata acttattaag ttctattgat ttttttcaac aagaattaga
    36901 gagatgtaaa caaatgatac aattagacaa aaacgatgaa ttaagagaat ggatgaaaca
    36961 ggctaatacc ctaagagaaa ttttataaat ttgctagata tttactgaaa atataataga
    37021 atttatatta aaagcaacaa aaacattgaa aatttttaag gaaggttatg gcaaaaagaa
    37081 aaggcaaaac ttatttatct gttttaattt tagttttaat agcaattttg atttttttta
    37141 tttcaagatt aagtattttt gaaaaaaatc ctcctcaaat tttaatgcca gatgttgtat
    37201 atactgatct taaaaaacct attttagtgc atattaaaga tgatgaaagt tctatcaaaa
    37261 acgtacaaat tatattgcat aaagacgaca atactagtgc aatggttata gcagatgaaa
    37321 agatttctaa tttaaaagat attaccttac aagttgcttt gccaaaattt ggttacaaag
    37381 aaaatgtaaa atcttttgtt ttggaggtga tagctaaaga ttctagtttt tggaattttt
    37441 ttagtggcaa tgaagcaaga aaacaaattg cggtattagt agataatacg gctccaaaaa
    37501 tcaatatcat aagcaattct taccaaatcg agcaaggtgg tgctggggca gttgttttta
    37561 aggctgatga tgctaattta gataaggtgt atatagaaac aaataaaggt aaaatcttta
    37621 aagccacacc ttatgtaaaa gaaggatatt atgcggcttt gattgcttgg gatgcaagag
    37681 atgaggaatt tcgtgcattt gttatcgcta cggataaagc gggcaatatt tcaaaagaac
    37741 gtataaggta ttattttgtt aatcgtaaat atcgtgtttc aaatatcaat ctaacggata
    37801 aatttttaga tggaaagatt gagaatttag caaatcagta cgctccaaaa gataataatc
    37861 tcaatcgtta tgaaaaattt aagtttgtca atgaaacttt aagaaatagc aatgaaaaac
    37921 ttatccatga aatcacttca aaagtacctg aggaaaaaat tgataatttt gatttgaatt
    37981 tatttttacc tcttaaaaat ggtatgaaag tagcggattt tgctgatcat aggtattatt
    38041 cttataatgg gcaatttgtg agtgattctt atcatatggg gcttgatcta gcaagcgtag
    38101 cacaagctcc tatcataagt aataacgcag gcaaggttgt ttttgctgct gaaaatggaa
    38161 tttatggttt aaatttaatt gtttatcatg gttttggagt atatagtctt tatgggcact
    38221 gttcttctaa aaatgttgat ttagatgaaa tgattaataa acaaagcatt ataggcaaaa
    38281 caggaacaag tggtttagcc ttaggcgatc atttgcattt tggagttttg gttcaagggg
    38341 ttgaaacgcg tcctgaacaa tggcaagata aaaaatggat agaaaataat atttacaatg
    38401 ttttaaatga tggtaaaaag ataattttag gaaaaaatta atgaaacaat taactttagc
    38461 aaaaactgtc aaaggcgtag gtataggact tcataagggt gaacccatag aaattacttt
    38521 agagccttta gaagcaaata gtggtatagt attttttaga agtgatctta atgcaagcta
    38581 taaggcaagt cctgaaaatg tgatcaatac tcaaatggca actgttttag gagatgatcg
    38641 tggatttatt tctacaatag agcatttaat gagtgcgatt aatgcttatg gaatcgataa
    38701 tgtacgcata gttttaaatg caaatgaagc tcctgttatg gatggatcaa gtattagctt
    38761 ttgtatgatg cttgatgaag caggggtaaa agaacttgat gcacctaaaa aaattatggt
    38821 aattaaaaag cctatagaag taagagatgg taataaattt gtgcgtttaa ctcctactaa
    38881 agaaccccgt attaactata cgattaaatt tgacaatgct gttataggtg aacaaagtta
    38941 caattttgaa ttcagcaaaa aaaattatat agaaaacata gcaagggcta ggacttttgg
    39001 ttttttaaaa gatgttcaag ctcttaggag tatgaattta gcactaggtg gaagtttaga
    39061 aaatactata gtggtagatg aaaatcgtat tttaaatcct gaaggtttgc gtttcaaaga
    39121 tgagtttgta agacataaaa ttttagatgc aattggagat ttaaccttac ttggatatcg
    39181 tgtttttggg gattatactt catatgctgg gagtcatcat ttaaatcatt tacttactaa
    39241 agaagtttta aaagataaag atgcttatga aattgtaagc cttgaaaaaa caacccaaaa
    39301 agcttatgaa aaggtatttg cataaaaact tctcttttac ttaatacttt atctaagcct
    39361 ttaatgatcg gaatttatca agatgataaa cttataaaaa cttataaaag tgaagaaaaa
    39421 gcaagcgaat ttttaccaaa aattttagat gaattgctta aagaatatga ttttacaagt
    39481 ttaatctatg ctaatggtcc aggttcttat atggggatta aaatttctta tgtaagtttg
    39541 agtactttaa gtatagtaaa aaatattcct ttatttgcgg tgagtgcttt tgaattaaat
    39601 ggctataaac ccataagtgc aaataaaaat ttttgttttg tatataagga aggtgaaatt
    39661 tgtttagaac aaaatatccc agcagagttt tttttaccaa aaaatttaca agagcttaaa
    39721 ctaaataatg ataatcttcc cttttatttt ttagatgcaa tttaggatga aatttgaaaa
    39781 ttttagttcc agctacgagt gcgaatttag ggccaggttt tgattgttta ggacttagtt
    39841 taaagctttt taatgaaact caaatccaaa aatcaggtgt ttttagcatt agtattggag
    39901 gcgagggaag tgataatatt tttcttaaaa aaaacaatat atttgtaaat attttttatg
    39961 aaatttatga aaaactaagc ggaaaaaaag ataattttcg ttttattttt caaaataaca
    40021 ttcctctttc aagaggatta ggaagctctt cagctgtgat tgttggagct attgccagtg
    40081 cttattatat gagtggattt aaggtagaaa aagaacgtat tttagatgaa gctttaattt
    40141 atgaaaacca tccagataat atcgctccag ctactcttgg tggttttgtg tgttctttgg
    40201 ttgaaaaaaa taaagtttat agtatcaaaa aagagattga taaagattta gctgctgtgg
    40261 ttgtgatccc aaatttggca atgagcacgg aacaatcacg ccaagctttg gccaaaaatt
    40321 taagttttaa tgatgcggtt ttcaaccttt ctcatgcttc atttttaacc gcttgttttt
    40381 tggagaaaaa atatgaattt ttaaaatttg caagtcaaga taagctccat gaaatcaatc
    40441 gtatgaaaaa cttacccgag ctttttgaag tgcaaaaatt tgccttagaa aataaagctt
    40501 taatgagcac actttcaggt tcgggatcga gctttttttc tttagctttt aaagatgacg
    40561 ctttagcttt ggcaaagaaa atacaaacaa aatttaaaga ttttcgtgtg caatatttag
    40621 aatttgatga taatggcttt gaaatttgct aaaaaatata aaaaaaagat ataattttga
    40681 aaaaacatat accaattaga atgtgcatag tgtgtaaaaa ccgctttgag caaaatatgt
    40741 tatttagatt taaagttgtt ttaggagata ttgtgcctaa agcagaacat ggaagaagcg
    40801 gatatttatg tcaaaattgt attgagagag aagataaagt cttacaaaaa gcattttcta
    40861 aaatatgtaa aaatttaaat actaaaatta ctcagcaagg acttaaggag atatttttaa
    40921 atggcaaaga ttagaattca tgaaatcgca aaagaattag gttatgatag taaggaaatt
    40981 attgaaaagg caaatgaatt aggacttgga attaaaacag catcaaatgc tgtagaacct
    41041 gagattgcgg cagctattta tgagtatata caaacaagag aaattccaga agcttttaag
    41101 aaaaatatca aaactcctac ggcaaaaaag cctaaaaaag aaaatataaa agaacaagaa
    41161 aagctaaatg aatctgaaaa aaaagaacct aaaaaagaag aaaagcttaa acaagaagtt
    41221 aaaaaagaag aattaaaaat tgaaaaagaa aatgcaaaag aggaagaaaa acaagaaatt
    41281 attgatgctc ataagccaca aagccttgct agtgcaactt tagccaaaag acgcggactt
    41341 gttattgtta aaaagaaaaa agacgaagaa gaaattcaag ttaaaaaaga agaagtaaaa
    41401 aattcaaatg atatatctat caataatgaa gagcgcttaa gtttaaaaac tatgttttca
    41461 aatgctgatg agagtttaaa gaaaaagaaa aaagaaaaaa aatcttttgt tgcgagtaaa
    41521 aaagaaagta ccgaaaaaat gaatttttta gatgaacatg attttggtga tatttcttta
    41581 gatgatgaag atgaggtagt attacctgat tttagtgtaa aagaacaaga aaaaccacaa
    41641 aatatcaata aaaaacaacc taattttata agacaagctg ttggaaattc tgcgggtttt
    41701 gggcttgaag gtggaattca aagaagaagt cgtaaaaaac catctaaaaa gattgaaaaa
    41761 aaggaagtag aagaagtagg tagcgttgct atttctaaag aaattcgtgt gtatgaattc
    41821 gctgataaga taggaaaaag cactagtgaa gtgatttcaa aacttttcat gcttggaatg
    41881 atgacaacaa aaaatgattt cttagatgaa gatgcgattg aaattttggc tgctgaattt
    41941 ggtatagaga tcaatatcat taacgaggct gatgagtttg attatgtaaa agactatgaa
    42001 gaagagactg atgaaaaaga tttagtgact agagcacctg tgattaccat catggggcat
    42061 gttgatcatg gtaaaacttc tttgttagat tatattagaa aatcacgcgt tgcaagtggt
    42121 gaagcagggg gtattactca gcacgtgggt gcttatatgg tagaaaaaaa tggacgtaaa
    42181 attactttta ttgatactcc aggtcacgaa gcttttactg ctatgcgtgc aaggggtgca
    42241 agtatcactg atattgtaat catcgttgta gccgcagatg atggggtaaa accacaaact
    42301 aaagaagcga taaatcatgc taaagcagca ggtgtgccta ttattattgc tattaataaa
    42361 atggataaag aagcagcaaa tcccgatatg gtaaaaactc aactcgcaga aatggaaatc
    42421 atgccagtag aatggggcgg atcttatgaa tttgtaggag tttcggctaa aacaggaatg
    42481 gggattgaag atttgcttga aatcgtgctt ttacaagctg atattttaga acttaaagcc
    42541 aatccaaaaa gttttgctaa agcaagcatt atagaaagtt ctgtgcaaaa agggcgtggt
    42601 gcggtagcta ctattatcgt gcaaaatgga acacttactg taggaagtac tgtggttgca
    42661 ggcgaggctt atggaaaagt gcgtgcgatg agcgatgatc aaggtaaagc tttaaaagaa
    42721 atcaaaccag gtgaatgtgg ggttatcgta ggacttagtg aagtagcaga tgcaggtgaa
    42781 attttaattg cagtaaaaac cgataaagaa gcaagagaat acgctaataa acgccacgaa
    42841 tacaatcgcc aaaaagaact tagtaaatct actaaagtta gcattgatga gcttggagct
    42901 aagattaaag aaggcaatct aaaagccttg cctgttattt taaaagctga tgtacaagga
    42961 tctttagaag ccttaaaagc aagtttagaa aaacttagaa atgatgagat taaagtgaat
    43021 atcattcata gtggggtagg aggaatcacg caaagtgata tagagcttgc aagtgcgagt
    43081 gaaaactcta tagtattagg ttttaacata cgcccaacag gggaagttaa agagcgtgct
    43141 aaagataaag gcgtagaaat taaaacttat aatgtaattt ataatctttt agacgatgta
    43201 aaagccttac ttggtggtat gatgagtccg attatttctg aagagcaatt aggacaagca
    43261 gagattagac aagtgattaa tgtgccaaaa atcggacaaa tcgcaggttg tatggtaact
    43321 gaaggggtga ttaaccgtgg agctaaaatt cgccttatcc gtgatggagt tgtggtttat
    43381 gaaggcaatg taagttcact caaacgcttt aaagatgatg ctaaagaagt ggcaaaaggc
    43441 tatgagtgtg gcgtaggtat agaagggtgt gatgatatga gagtgggtga ttatatagaa
    43501 agctataaag aagtagagga acaagcaagt ctatgaaccc aagtgagatt aaaaaactac
    43561 gcactgaaag tatcttaaaa gagctgatcc ctgaagcttt agcaaattta gatgatgaaa
    43621 atttgaaaaa tttgtgtgta gtggatgtag agtgtaaaaa aggcagatac gatgcttttg
    43681 tgtatcttga taagatgttt tttaatgttc atgagcaaga aaaaatttta tcttctttaa
    43741 aaaaggcaag tagagctttg caaaattact gcatgagtga gcagggttgg tataggtgtc
    43801 cgaattttca ttttaaattt gatgatagac ttgagtatca aaaccatatg gatgcacttt
    43861 ttgaaaaaat aaaaaaggat aaaaatgaat cttgaagccc tttgcaaaga agcaggactt
    43921 agtttttatg atgatgagct agtaagtgaa aatggcagaa aaatttatag aatttatgtg
    43981 caaaaagaag gcggggtaaa tcttgatgat tgtgcaagac ttagtgaaat tttatcgcct
    44041 atttttgatg tagagccacc tgtaaatggg gagtattttt tagaagtatc ttcaccagga
    44101 cttgaaagaa aacttagcaa gatagaacac tttgctaaaa gtataggtga acttgtgaag
    44161 attgcaacca atgaaaaaga aaaattcgaa gcaaaaatca ttgctgtaga tgatgaaaat
    44221 atcatcttag aaaatttaga aactcaagaa aaaactacta taaattttaa tgatataaaa
    44281 aaagctagaa cctttgtgga gtggtaagaa atctaaatat gatttaaaaa taacataatt
    44341 taaggatttg gtaatgtgga atttagatga aaaaaaatta caagaaatgc ttgatggctt
    44401 tttaaatttt caagaagtat ggactttaga aaaagttaaa aatatgactc ttgaagaata
    44461 tactaacatt aaaaaagata atccaaatag agatgatttt actttttgga tagaaagtaa
    44521 attggataat ctaggaagta tttggggtgg ctcagctttt aaatttggta tatatagaag
    44581 aaatgatgaa agtcagaaag aatcttctag cggtagatta tatagtcaaa attatgcttg
    44641 gattgctaaa tatggcaata atgaaaatga agcatttaat aatatcaaag aaaaaatcat
    44701 acaaataata caagcaagtc aagataataa tttaaaaact atagaaaaaa tagattttgg
    44761 ggatgcaatt aaatggaaaa tagcttttca ttatcaagat gtaaagaata
//
LOCUS       DAPIYB010000003        43275 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.003, whole genome shotgun sequence.
ACCESSION   DAPIYB010000003 DAPIYB010000000
VERSION     DAPIYB010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 43275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43275
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.003"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..749
                     /locus_tag="RJ318_000105"
     CDS             <1..749
                     /locus_tag="RJ318_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HDV7430018.1"
                     /translation="LRVLNILELLAKEKLTLSAIAKKLNIPAGTLWPILQTLQEKKYI
                     KCDLKNKSYYLDFKIIELGCNIKNENNIFEIIKKHMKNIRNLTNQTCQMGILKDGNVL
                     YLEKIDANNTVQLKSFIGTSYPAYATSLGKALLSNKNKKELEKLYPKNFDKITENTLN
                     NINELYQQIKQIKKEKIAIEIGEMNPQIECMAIGIEHKNKIIAAISISYLIYCSNKAF
                     REKNKKILLEEKNKIEKVLKIYFNDLDTLY"
     gene            complement(780..5333)
                     /gene="rpoC"
                     /locus_tag="RJ318_000106"
     CDS             complement(780..5333)
                     /gene="rpoC"
                     /locus_tag="RJ318_000106"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDV7430019.1"
                     /translation="MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPET
                     INYRTLKPERDGLFCAKIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSR
                     MGHIELVTPVAHIWYVNSLPSRIGTLLGVKMKDLERVLYYEAYIVENPGDAFYDNEST
                     KKVEYCDVLNEEQYQNLMQRYENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMGAT
                     NSEAKKKTIIKRLKVVENFLNSNLNANTDSDEAVPNRPEWMMITNLPVLPPDLRPLVA
                     LDGGKFAVSDVNDLYRRVINRNTRLKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRR
                     ANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPK
                     KMALELFKPHLLAKLEEKGYATTVKQAKKMIENKTNEVWECLEEVVKGHPVMLNRAPT
                     LHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSQEAIAECKVLMLS
                     SMNILLPASGKSVTVPSQDMVLGIYYLSLEKAGAKGSHKICTGIDEVMMALESKCLDI
                     HASIQTMVDGRKITTTAGRLIVKSILPDFVPENSWNKVLKKKDIAALVDYVYKQGGLE
                     ITASFLDRLKNLGFEYATKAGISISIADIIVPNDKQKAIDEAKKQVREIQNSYNLGLI
                     TSGERYNKIIDIWKSTNNVLSKEMMKLVEKDKEGFNSIYMMADSGARGSAAQISQLAA
                     MRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKL
                     IDVAQNVKITIEDCGTHEGVEINEITADSSIIETLEERILGRVLAEDVIDPITNSVLF
                     AEGTLMDEEKAKILGESGIKSVNIRTPITCKAKKGICAKCYGINLGEGKLVKPGEAVG
                     IISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYNLKTYKNKEGKNI
                     VANRRNAAVLLVEPKIKTPFKGVINIENIHEDVIVSIKDKKQEVKYILRKYDLAKPNE
                     LAGVSGSIDGKLYLPYQSGMQVEENESIVEVIKEGWNVPNRIPFASEILVEDGEPVVQ
                     NIKAGEKGTLKFYILKGDGLDRVKNVKKGDIVKEKGFFVVIADENDREAKRHYIPRES
                     KIEFNDSEKIDDANTIIASAPKKERKVIAEWDAYNNTIIAEIDGVVSFEDIEAGYSAD
                     EQIDEATGKRSLVINEYLPSGVRPTLVIAGKGDKAVRYHLEPKTVIFVHDGDKIAQAD
                     ILAKTPKAAAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIII
                     QAEDGTSAEYLIDKSKHIQVRDGEFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISE
                     IQQVYRGQGVVISDKHIEVIVSQMLRQVKVVDSGHTKFIEGDLVSRRKFREENERIIR
                     MGGEPAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVI
                     LGRMIPVGTGLYGEQNLKLKEQE"
     gene            complement(5326..9462)
                     /gene="rpoB"
                     /locus_tag="RJ318_000107"
     CDS             complement(5326..9462)
                     /gene="rpoB"
                     /locus_tag="RJ318_000107"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDV7430020.1"
                     /translation="MCDMLDNKLGNRLRVDFSNISKQIEIPNLLQLQKKSFDYFLNLD
                     NGESGIEKVFKSIFPIHDPQNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIR
                     LTLHEKDEKTGEKVGVKDIKEQEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVI
                     FKEEESSTVANKLVYTAQIIPDRGSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGY
                     KKQDIIKLFYPIQTIHVKKDKFLTEFNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKK
                     AEQLIKDGLKWIEYPVEILLNRYLANPIIDKESGEVLFDSLTLLDESKLAKIKEQKSF
                     DIANDLANGVDAAIINSFAQDGETLKLLKQSENIDDENDLAAIRIYKVMRPGEPVVKD
                     AAKAFVNDLFFNPERYDLTKVGRMKMNHKLGLEVPEYVTVLTNEDIIKTAKYLIKVKN
                     GKGHIDDRDHLGNRRIRSIGELLANELHLGLAKMQKAIRDKFTSLNADLDKVMPYDLI
                     NPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDVH
                     ATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVEAPYRKVVNGKVTNEVVYLTAT
                     QEEGLFIAPASTKVDAKGNIVEEFVEARQDGETILARREEVQLIDLCSGMVVGVAASL
                     IPFLEHDDANRALMGSNMQRQAVPLLTASAPIVGTGMEQIIARDAWEAVKAKRGGVVE
                     KVDNKSIFILGEDDKGPFIDHYTMEKNLRTNQNTNYIQHPIVKKGDIVKAGQIIADGP
                     SMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVHIYEKEIEARELKD
                     GIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSPKGEVKPTPEERLLR
                     AIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRAIKSYDKEKMALEKEHH
                     DRLLMMDREEMLRVCALLSKASLNSDQKIGDKNYKKGQTADISELEKINRFTLTTLIK
                     AYSKEIQKEYDDLKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYIATKRK
                     LKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILESHL
                     GLVGLRLGDQIQEIFDRKQKDFLKELRAKILEICSIPRLANEKEFIKSLSDEELLNYA
                     RDWSKGVKFSTPVFEGVNIEEFSKLFKMAKIDMDGKTELYDGRTGEKIAERVHVGCMY
                     MLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLRE
                     MLTIKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
                     "
     gene            complement(9571..9948)
                     /gene="rplL"
                     /locus_tag="RJ318_000108"
     CDS             complement(9571..9948)
                     /gene="rplL"
                     /locus_tag="RJ318_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDV7430021.1"
                     /translation="MAISKEDVLEYISNLSVLELSELVKEFEEKFGVSAAPVMVAGGA
                     VAGGAVAAAEEKTEFDIVLTDGGAKKIEVIKIVRALTGLGLKEAKDAVEQTPSTLKEG
                     VAKAEAEEAKKQLEEAGAKVELK"
     gene            complement(9969..10448)
                     /locus_tag="RJ318_000109"
     CDS             complement(9969..10448)
                     /locus_tag="RJ318_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDV7430022.1"
                     /translation="MTRSEKVEIIAKLEEGFKASEAIVVCNYRGLSTKKLEELRNNAR
                     ENNVKVQIVKNTLANIALNNSGKTGLVLKDTNIYLWGEDQLSVSKVAAKFEENNDKFE
                     IKTAHIEGEVVDVAKVKALAKMPSRNELLAMLLQVWNAPITNFTIGLNALKNKKESE"
     gene            complement(10600..11301)
                     /locus_tag="RJ318_000110"
     CDS             complement(10600..11301)
                     /locus_tag="RJ318_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDV7430023.1"
                     /translation="MAKIAKRLKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEI
                     ALKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVE
                     EIQKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQ
                     VNFRVDKQGNIHAGLGKVSFSKEQLWDNVSTFVKAINKHKPAAAKGRYIKNAALSLTM
                     SPSVKLETQELLDMK"
     gene            complement(11356..11781)
                     /gene="rplK"
                     /locus_tag="RJ318_000111"
     CDS             complement(11356..11781)
                     /gene="rplK"
                     /locus_tag="RJ318_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDV7430024.1"
                     /translation="MAKKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNE
                     RTKDMAGFNIPVVITVYADKSFTFITKQPPATDLIKKAAGISKGTDNPLKNKVGKLTR
                     AQVLEIVDKKIADLNTKDRDQAAKIIAGSARSMGVEIVD"
     gene            complement(11807..12340)
                     /gene="nusG"
                     /locus_tag="RJ318_000112"
     CDS             complement(11807..12340)
                     /gene="nusG"
                     /locus_tag="RJ318_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDV7430025.1"
                     /translation="MSTHKWYAIQTYAGSEMAVKRAIENLVKDNGIEEQLKEIVVPTE
                     DVIEFKNGKEKISERSLYSGYVFALLDLNTELWHRIQSLPKVGRFIGESKKPTPLTEK
                     DINLILEKVHNRAAPKPKISFEEGENVRITEGPFANFTAIVEEYDMVRGLLKLNVSIF
                     GRSTPVEILYSQVEKII"
     gene            complement(12350..12529)
                     /gene="secE"
                     /locus_tag="RJ318_000113"
     CDS             complement(12350..12529)
                     /gene="secE"
                     /locus_tag="RJ318_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDV7430026.1"
                     /translation="MEKLITYFKLSKAELRKVIFPLKEQVRNAYITVFVVVAVISLFL
                     ALVDWLMSSIVSAIV"
     gene            complement(12548..12623)
                     /locus_tag="RJ318_000114"
     tRNA            complement(12548..12623)
                     /locus_tag="RJ318_000114"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(12588..12590),aa:Trp,seq:cca)
     gene            complement(12636..12794)
                     /gene="rpmG"
                     /locus_tag="RJ318_000115"
     CDS             complement(12636..12794)
                     /gene="rpmG"
                     /locus_tag="RJ318_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDV7430027.1"
                     /translation="MRIKVGLKCEECGDINYSTYKNSKNTTEKLELKKYCPRLKKHTL
                     HKEVKLKS"
     gene            complement(12847..14046)
                     /gene="tuf"
                     /locus_tag="RJ318_000116"
     CDS             complement(12847..14046)
                     /gene="tuf"
                     /locus_tag="RJ318_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDV7430028.1"
                     /translation="MAKEKFSRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRRGLAEL
                     KDYDNIDNAPEEKERGITIATSHIEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDAELLELVEMEIRELLSS
                     YDFPGDDTPIISGSALKALEEAKAGQDGEWSAKIMDLMAAVDSYIPTPTRDTEKDFLM
                     PIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEA
                     GDNVGVLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRP
                     QFYVRTTDVTGSIKLADGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSG
                     VVSKIIK"
     gene            complement(14115..14189)
                     /locus_tag="RJ318_000117"
     tRNA            complement(14115..14189)
                     /locus_tag="RJ318_000117"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14155..14157),aa:Thr,seq:ggt)
     gene            complement(14294..14370)
                     /locus_tag="RJ318_000118"
     tRNA            complement(14294..14370)
                     /locus_tag="RJ318_000118"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14334..14336),aa:Gly,seq:tcc)
     gene            complement(14377..14462)
                     /locus_tag="RJ318_000119"
     tRNA            complement(14377..14462)
                     /locus_tag="RJ318_000119"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14426..14428),aa:Tyr,seq:gta)
     gene            complement(14512..14587)
                     /locus_tag="RJ318_000120"
     tRNA            complement(14512..14587)
                     /locus_tag="RJ318_000120"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14552..14554),aa:Thr,seq:tgt)
     gene            complement(14679..15440)
                     /locus_tag="RJ318_000121"
     CDS             complement(14679..15440)
                     /locus_tag="RJ318_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDV7430029.1"
                     /translation="MSILKIENLQKYYGSHHALKDINLEVKAKEVVVILGPSGCGKST
                     LLRCINGLEEIASGNIYIDNEKIDKDFKEWPRMRQKVGMVFQSYELFEHLSVEENILL
                     GPMKVQKRKKDEVLKEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELM
                     LFDEVTAALDPEIVREVLEVMLNLAKEGMTMLIVTHEMGFAKAVADKIIFMDEGKIIE
                     ENDPKSFFKNPKSERAKKFLNLFDYHNIDKNNIGL"
     gene            complement(15442..16098)
                     /locus_tag="RJ318_000122"
     CDS             complement(15442..16098)
                     /locus_tag="RJ318_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7430030.1"
                     /translation="MLELLNTDTLLRLWQGLFVTLEISFISIIITSIGGLFLGILMSF
                     KNTYIYAFCRLGLEFVRVMPLLVWLFVVYFGFPRWFGWDLSSVSAAIIVFSIWGCFEM
                     MDLVRVSLQSIPKHQYESASSLGLNTVQSFAYVIIPQAMRRLTPMSMNLLTRMIKSTT
                     FAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS
                     "
     gene            complement(16091..16792)
                     /locus_tag="RJ318_000123"
     CDS             complement(16091..16792)
                     /locus_tag="RJ318_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7430031.1"
                     /translation="MDFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYF
                     KIKILENICKLYIEFSRNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSVEETLRP
                     SFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAI
                     SMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILP
                     LSFILLKFEKRLLHA"
     gene            complement(16808..17404)
                     /gene="nssR"
                     /locus_tag="RJ318_000124"
     CDS             complement(16808..17404)
                     /gene="nssR"
                     /locus_tag="RJ318_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrosative stress-sensitive transcriptional
                     regulator NssR"
                     /protein_id="HDV7430032.1"
                     /translation="MKDYLELLSSVGKLKKFQKNSILFYEGEEAKNFFILLKGKIRIY
                     KSTASDKEITLHYFNPPNFIAEMPAFKKINYPANAVFEEDGEILEIDFINFQNLCSEN
                     KEFNFLLISSLFDKIKILEKKLSQNALDLRTRLLKYLLENEKNLDTISQKQIAIDLNV
                     RAQSLSRVLKELKISELIDTKKGRIEILNKDMIMKELW"
     gene            17499..17882
                     /gene="ctb"
                     /locus_tag="RJ318_000125"
     CDS             17499..17882
                     /gene="ctb"
                     /locus_tag="RJ318_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="truncated hemoglobin Ctb"
                     /protein_id="HDV7430033.1"
                     /translation="MKFETINQESIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWK
                     EHKAKIGNFWAGMLLGEGDYNGQPLKKHLDLPPFPQEFFEIWLKLFEESLNIVYNEEM
                     KNVILQRAQMIASHFQNMLYKYGGH"
     gene            complement(17879..19702)
                     /gene="recG"
                     /locus_tag="RJ318_000126"
     CDS             complement(17879..19702)
                     /gene="recG"
                     /locus_tag="RJ318_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDV7430034.1"
                     /translation="MKIKESDFEFFKKLKIRSAIDLALLLPKKIENLNPSKNPKENEI
                     CTQKITIKSVSSRKNQLFGLGFCEEWQENISFVFFHPRAWHFGICKVGKELIFNAKLS
                     HFNHTWQFNNPKILTSFEGFSPKYQILGLKDTKIAAFIHKYLNYENLKESGIEDKYIH
                     FLLNLHAYDEKSFFMFENLQNFSKDLKYIEIYNFLKRLKAKKTHFKAHQINVFNIANW
                     LKDLPFSLTKDQLNALKDIEKDLHSKEAKRRVIMGDVGCGKTLVLLGAALMVYPKQAI
                     LMAPTSILAYQLYEEAKKFLPDFMNILFIKGGKKEKDLEQNIQKANLVIGTHALIHLE
                     SHNAVLVMIDEQHRFGSAQREKIHSLNKQEFAPHFIQFSATPIPRTLSMIQSELLNFS
                     FIKQMPFKKDITTYCIQNEGFSKLSEKIKEEIAKNHQIIIIYPLLSASDKIPYLSLEQ
                     AKEYWQSHYEKVFVTHGKDKQKDEILERFRDEGNILLSTTVVEVGISLPRLSMIVIVG
                     AERLGLATLHQLRGRVGRVGLKSACYLYTKLKEIPSRLKEFASTLDGFKIAELDLKNR
                     LSGDLLDGFMQHGNEFKFFDFSKDEEILEKVKKDLAKKLPN"
     gene            complement(19692..20912)
                     /locus_tag="RJ318_000127"
     CDS             complement(19692..20912)
                     /locus_tag="RJ318_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDV7430035.1"
                     /translation="MQYLESRGIKIPFIFEKNSDFPIVVLKLVFRNCARSYDEIAGLA
                     KMFSRILNEGVDDKFFKDLEFRAINLEASSGFESLEINLSCLKENFDFALKSLEKLLL
                     KPRIEEKTLQKLKINALGELASKNSDFDYLAKNLLNAQIFKCKEFQSPNDGDEKSIET
                     LSLKDLQNFYKNFIHLSDLVVILGGDLEEKQAKEDLLKLLSKLQIGKKNTPKKYELGK
                     NIKDEILVRPESEQAYIYFATPFFADFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVK
                     RGLAYSAYAMLDMNMSFSRVFGYLQTKNESAKEAKKIVKELFEDFIKNGMTQNELDQA
                     KNFLIGSTPLRYESLSKRLSMSFNEFYQGLNLGYYKEELKLMEKVKLETINAYIKKHQ
                     ELLNISFASIQNEN"
     gene            complement(20912..21958)
                     /locus_tag="RJ318_000128"
     CDS             complement(20912..21958)
                     /locus_tag="RJ318_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HDV7430036.1"
                     /translation="MKRLDKKEALDLLHHASLTELGEMAYKRKLELHPEKITTFVVDR
                     NINYTNVCCIDCSFCAFYRHHKEDDAYILSFEEIGKKIEELEAIGGTQILFQGGVHPK
                     LKIEWYEELVSWIKEHYPNITVHGFSAVEIAYIAKASKISITEVLKRLQAKGLFSIPG
                     AGAEVLSDRVRDIIAPNKCDTATWLEVHRQAHKIGMKSTATMMFGTVENDEEIIDHFE
                     HLRKLQDETGGFRAFILWSFQSDNTALIQKHPEIMKQSSNKYLRLLALVRLYLDNFKN
                     LQSSWVTQGSLIGQLALKFGANDLGSTMMEENVVSAAGASYRMNQDEMIRLIRSLGEN
                     PAKRNTAYEILERF"
     gene            22032..23219
                     /locus_tag="RJ318_000129"
     CDS             22032..23219
                     /locus_tag="RJ318_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7430037.1"
                     /translation="MNYIELLKNNKNIRILASVQFIVYFGAWFSQTGVFTLLVELNAP
                     TWATATSAMLAFLPGVLLAPINGVIVEKNKPKKLLLSMISIELISIFCLIFVTSLSML
                     WLLFILIFIRLCVASIYFQAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGI
                     FIYFLGVKTAFLFDCILILIGISFLVRLSIPDFHQKTQSRFFTMIKEGFFYVLNNKII
                     FHLILLHAFIGLTAYETLVTLLAQHQYKEVLSAALVIGFLNAVRACSLAIGPMVLSKF
                     INDKNLFYMYLGQGLGIILWALTQFNFYISFLGLIGAGFFTSALWAYTYTMIQKNADK
                     EYHGRVIAYTDMIYLSFSAIISMLMGFLFEIGLSLELITGLLGMIFIFAAFYWKWFYK
                     KYL"
     gene            complement(23235..24323)
                     /gene="nusA"
                     /locus_tag="RJ318_000130"
     CDS             complement(23235..24323)
                     /gene="nusA"
                     /locus_tag="RJ318_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDV7430038.1"
                     /translation="MEKIADIIESIANEKNLNLENVREKVATALINTAKRIYGQEYEF
                     FVDPKNLNLYQKITIVADNDERLQNKSESFIALSKAKSEAPDVEIGDELTYECSLENL
                     GRTAVNTLHKELEYHIQKLLEQTIFEKYKNKVGQMVFGTVVRVDNEENTFIEIDELRA
                     FLPRKNRIKGEKFKIGDVVKAVIRRVYTDKGIKIELSRTSPKFLECLLEAEVPEIKDG
                     YVNIIGCARIPGERAKIILQANGTNIDPVGATVGVKGVRINAVSKELHNENIDCIEFT
                     NESEILISRALAPAIVNSVKIEDKKAIVSLNSEQKSKAIGKNGINIRLASMLSGYEIE
                     LNELSSSQLNNAISNEEAMKNLQDLFKI"
     gene            24451..24693
                     /locus_tag="RJ318_000131"
     CDS             24451..24693
                     /locus_tag="RJ318_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430039.1"
                     /translation="MELKLARTLINEKPKNISLEKIEEAIEKEGQKFFYFDKDNTHKQ
                     LIALVNHFEKKGVSIYHRTVKYGLDDNDFMYEVHIL"
     gene            24690..25991
                     /gene="miaB"
                     /locus_tag="RJ318_000132"
     CDS             24690..25991
                     /gene="miaB"
                     /locus_tag="RJ318_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDV7430040.1"
                     /translation="MSAKKLFIQTLGCAMNVRDSEHMIAELTQKENYALTEDIKEADL
                     ILINTCSVREKPVHKLFSEVGGFEKVKKEGAKIGVCGCTASHLGNEIFKRAPYVDFVL
                     GARNISKITQAIKTPKFMGVDIDYDESEFAFADFRNSIYKSYINISIGCDKHCTYCIV
                     PHTRGDEISIPFNIIYKEAQKAIEKGAKEIFLLGQNVNNYGKRFRNEHKKMDFSDLLE
                     ELSTIEGLERIRFTSPHPLHMDDKFLEVFANNPKVCKSMHMPLQSGSSEILKAMKRGY
                     TKEWYLNRALKLRELCPNVSISTDIIVAFPGESEKDFEETVDVLEKVRFEQIFSFKYS
                     KRPLTKAATMPNQIDEEIASRRLSTLQNRHSEILDKIVKKQENKTFKVLFEELRAGNS
                     IAGRTDNNFLVQVEGSEELLGQFKEVKITNAKRMVLYGEIV"
     gene            25975..26604
                     /locus_tag="RJ318_000133"
     CDS             25975..26604
                     /locus_tag="RJ318_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HDV7430041.1"
                     /translation="MGKSFKIHCLTYIIFILQWLIFLSCKKHYKGEKVDRKAGVILFW
                     HGKLALMPFAFRHYRQKNKKAYVMISHHKDGEQIAKIIKLFGLDTVRGSTSRGASSAL
                     RAAFKVLEQNDDIVITPDGPRGPYHSISDGSIILAQKKELKIRILNYEANRFWKFKSW
                     DKMILPKPFSKITYSLSEPLDILSLDKEKAKEFLMKQFDKISLADQFKE"
     gene            26606..27565
                     /locus_tag="RJ318_000134"
     CDS             26606..27565
                     /locus_tag="RJ318_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clan AA aspartic protease"
                     /protein_id="HDV7430042.1"
                     /translation="MLFLLKKIFPQLFISIILEDKKNIVKASIYRGNKLISSNEKTFD
                     KSENLLEYIKNLSKHFLFYHTALFLDAKEQGLIPSTNIQDCEHFNIGKISLQHILLNN
                     ALVYTATEHVEYYSELFEEYRGLDFLYSPFALLYYNMQKEKQPDDQILLYGFKQGYLL
                     AIIVAKGNTILYGDFKIFEQELGLELELPSEDNQEIENNNDDTEVTLDNFNEALNNKF
                     DLLDQENNLETLDNNDNFNLDELNQFSNDMELCRYIITSIEKFYNDDKYAGVFINGIL
                     LYSESDININAIDFLESETFLEIKTKQINTLDLMIELMRKEVK"
     gene            27562..28089
                     /locus_tag="RJ318_000135"
     CDS             27562..28089
                     /locus_tag="RJ318_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430043.1"
                     /translation="MTYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIA
                     LINSSIDDEKQQVIVLQNQTKQNEMLYEILFDQSQIAKNFNTQNQIVKESLRNLFDII
                     VKTDNITLESVEQDEYSLKLIGVTPTREMFTLLLETPLKSIFDQSYTTYYRLDNGWYR
                     FVSISKQIPGVADER"
     gene            28079..28597
                     /locus_tag="RJ318_000136"
     CDS             28079..28597
                     /locus_tag="RJ318_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430044.1"
                     /translation="MKDKSLEEIDLLKLIICALSFISVCTALILFLLLPTLKNYKQAN
                     LRENSQLAILKAAKSKFDFSEDKISTLRSENNKSLEQFEQNFNIGNFNIFLQKYFQNV
                     KIQETKPEKQEKYLKNRLAIKATMNNPRRLYDFIDALKNYNNLIKLDYPLNLKAGEQG
                     ISIDLTLKVYSS"
     gene            complement(28589..29881)
                     /gene="thiC"
                     /locus_tag="RJ318_000137"
     CDS             complement(28589..29881)
                     /gene="thiC"
                     /locus_tag="RJ318_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HDV7430045.1"
                     /translation="MKTQMNYAKEGIFTKEMQIVAQKENLSKDFLLENIACGKIIIPA
                     NINHKSLDPNGIGFGLRTKVNVNLGVSNDCVDYSEEMKKVELAHKFGIEAIMDLSNYG
                     KTSRFRDELVNVSKAMIGTVPVYDAVGFLEKDLKQINAKDFLDVVYHHAKSGVDFMTI
                     HAGINSRAAHIFKQSKRLTNIVSRGGSVLYAWMMMKDAENPFFEYYDDLLDICLKYDV
                     TLSLGDALRPGSTHDASDGAQISELIELSLLTQRAWDVGIQVMIEGPGHMAINEIEAN
                     MQLEKRLCKGAPFYVLGPLVTDIGAGYDHISGAIGGAVAAASGADMLCYVTPAEHLRL
                     PNLEDVREGIVATKIAAHAGDIAKLPKERARDDEMSKARQEIDWEKMFKLAIDGEKAK
                     KMFNERRPDDLNSCSMCGKMCAMNTMNQILKGEDVSLA"
     regulatory      complement(29938..30042)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(30064..30825)
                     /locus_tag="RJ318_000138"
     CDS             complement(30064..30825)
                     /locus_tag="RJ318_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDV7430046.1"
                     /translation="MSLQQIDQIISILNKQSKPYDWVMQEFAKVEELKNFDLDLETFE
                     LLGLGLTLNKDNIFTLKTRTTKIKDEIFCIVDIESTGGVSKGEILEIGAVKIQNSKEI
                     GRFQSFVKVKEIPKNITELTGITYEMVENASSLAKVLSDFRLFLKDSIFVAHNVRFDY
                     SFISKALNECGFGILLNRRICTIEFAQCCIESPKYKLEVLKEFLGVENMHHRALDDAL
                     AAAEIFKYCLGKLPYHIKTTEELINFTKTARIKQK"
     gene            complement(30822..31469)
                     /gene="rpe"
                     /locus_tag="RJ318_000139"
     CDS             complement(30822..31469)
                     /gene="rpe"
                     /locus_tag="RJ318_000139"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDV7430047.1"
                     /translation="MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLT
                     FGPCVIEKISTISKLPLDVHLMVKDVSKFVDLFISLKPKFISFHMESEVHPIRLCEYI
                     RSQGIHPAIVLNPHTPIDSIKHMLEFVDMVLLMSVNPGFGGQKFLPLIHEKIKELRQM
                     IDKKNAKVFIEVDGGVNGLNASDLEESGADILVAGSYIFSSNDYKTAISSLKLEF"
     gene            31609..31803
                     /locus_tag="RJ318_000140"
     CDS             31609..31803
                     /locus_tag="RJ318_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDV7430048.1"
                     /translation="MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLEDGT
                     TRKMRIAASTLRTLKKQNSK"
     gene            31988..32203
                     /locus_tag="RJ318_000141"
     CDS             31988..32203
                     /locus_tag="RJ318_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDV7430049.1"
                     /translation="MLHEYRELMSELKGKDAHFDKLFDRHNELDDMIKDAEEGRTSLS
                     SMEISTLKKEKLHVKDELSQYLANYKK"
     gene            32213..33310
                     /locus_tag="RJ318_000142"
     CDS             32213..33310
                     /locus_tag="RJ318_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CZB domain-containing protein"
                     /protein_id="HDV7430050.1"
                     /translation="MFGSKINHSDLQKLEEENKNLTHKIEKFQSENLELKNKITSLEQ
                     AALESKLKTDLLNVLLTGVLKNITIIQGDMLENVNKAEVISSYSKTSLAEMDELNHIA
                     NSINASLGNITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRKLAEKTQKATTEVEMNINLLKQNANEMYTQSEQVEKISIDSN
                     AHIMSFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFSKSGKQ
                     LADHTSCRLGKWLASTGKERFGQNKSFLKINEPHEKVHENMNNAITIANTEDISKDIT
                     QHSIINKCEVAENASLDLFNVFKEMLDESDH"
     gene            complement(33342..33938)
                     /locus_tag="RJ318_000143"
     CDS             complement(33342..33938)
                     /locus_tag="RJ318_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDV7430051.1"
                     /translation="MAFKNLKELSFEKSNYIKPKRFAYESNGRLCTWDFIESKDSVSV
                     LLYHKELESFIFVRQFRIPLWYHQMHDKDYVKDDDMGYTIELCSGLVDKKLSLEEIAK
                     EECIEELGYAPKNLEKIGDFYTGFGSGVSKQSFYFVEVDEKDKISSGGGVDDEEIEAV
                     YVKVQDFEKKCKNMIRTPLLDFAYMWFLKEKWGKLKII"
     gene            complement(34021..34950)
                     /locus_tag="RJ318_000144"
     CDS             complement(34021..34950)
                     /locus_tag="RJ318_000144"
                     /inference="COORDINATES: protein motif:HMM:NF012801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDV7430052.1"
                     /translation="MVALYGENEYFITDDLIFTTGLRYIYSNLFDSEFTPRIYLVYHL
                     NDNIAFKGGVSKGYKTPSAKQLTNGYYNYANGNALFGNPDLKPEESINYELGADFRVF
                     DFAHYSITGFITDFTNQISSEYLTGMQNGINCSNGTVCKRPINLGKTQTKGIEFAFNT
                     KTYNGFSLNSSYTFMDNRYKDSQKNWFGGDRIENLPRHIAMLKLNYERGKFNSYIKTR
                     ARLDTIAKARVGGNGSLPWQKYKPFYIVDLGINYKINKQSSLSFAVQNLFDKNFFDPQ
                     VTRWDGANPAGYANRYQDYTEGRSFWLSYKYDF"
     gene            complement(34978..35517)
                     /locus_tag="RJ318_000145"
     CDS             complement(34978..35517)
                     /locus_tag="RJ318_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HDV7430053.1"
                     /translation="MIEDTLSISARLKYYDKAASDLKWPTPVWNNNNQKPDNYQQRPD
                     NYQIAIHSPGAFTSLGFGSRLNWTVDDKNNIYFDIERYINEISVNSISSRAIKSEKQL
                     FKDNIVLNHDGNYDFGSTNSYLQYGSTKDKELHSQIWVGEGKVVLPWNLGQYGNLVNT
                     FGARIDYEMLKNDQASAGS"
     gene            complement(35526..36113)
                     /locus_tag="RJ318_000146"
     CDS             complement(35526..36113)
                     /locus_tag="RJ318_000146"
                     /inference="COORDINATES: protein motif:HMM:NF019335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDV7430054.1"
                     /translation="MTQIKNMKFKKSLLCFLILSGALLKAEETYQLNDVVVSASGFEQ
                     DLVDAPASISIITKEELEKKPIKDIGEAIGDIPGVDVTMDKTGTYDFSIRGFGSSYTL
                     VLIDGKRQSVANGFYTNVFKGSESGYLPPLSMIERIEVIRGPASTLYGSDAVGGVINI
                     ITKKNPDKIEANIEFNTLLQQHSNHYGNAGVLMLM"
     gene            complement(36247..37185)
                     /gene="accA"
                     /locus_tag="RJ318_000147"
     CDS             complement(36247..37185)
                     /gene="accA"
                     /locus_tag="RJ318_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HDV7430055.1"
                     /translation="MASYLDFEKNIQQIDEDIINAQIKGDTEAVSILKKNLEKEISKT
                     YKNLSDFQRLQLARHPDRPYALDYIELILNDAHEIHGDRAFRDDPAIVCFMGYLGEKK
                     IIVIGEQKGRGTKDKIARNFGMPHPEGYRKALRVAGLAEKFQIPILFLIDTPGAYPGI
                     GAEERGQSEAIARNLYELSDLKIPTIAIVIGEGGSGGALAIGVADKLAMMKNSVFSVI
                     SPEGCAAILWNDPAKSEAATKAMKVTADDLKSQGLIDDVIDEPTNGAHRNKEAAAVAI
                     ADYVKKSLNELENIDVRELSANRMQKILKLGAYQEA"
     gene            complement(37187..38401)
                     /locus_tag="RJ318_000148"
     CDS             complement(37187..38401)
                     /locus_tag="RJ318_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HDV7430056.1"
                     /translation="MKRVVVTGIGMINALGLDKESSFKAICNGESGVNKITLFDATDF
                     PVQIAAEVKNFDPLEVVDGKEVKKIDRFIQLGIKAAREAMQDAGFSEELDKEEFGIVS
                     ASGIGGLPNIEKNSIICSERGPRKISPFFIPSALVNMLGGLISIEHGLKGPNISCVTA
                     CAAGTHAIGEAYKSIALGNAKKMLVIGAEAAICPVGIGGFASMKALSTRNEDPQHASR
                     PFDKERDGFVMGEGAGALVFEEYEEAKKRGATIYAELIGFGESADAHHITSPTLDGPL
                     RAMKKALNMAGNPKVDYINAHGTSTPVNDKNETAAIKELFGNNIPLISSTKGQTGHCL
                     GAAGAIEAVVSVMVLRDGVVPPTINQLVKDDECDLDYIPNISRKVDLKVVMSNSFGFG
                     GTNGCVVFKKVD"
     gene            complement(38428..38661)
                     /gene="acpP"
                     /locus_tag="RJ318_000149"
     CDS             complement(38428..38661)
                     /gene="acpP"
                     /locus_tag="RJ318_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDV7430057.1"
                     /translation="MATFDDVKAVVVEQLSIDADAVKMESKIIEDLGADSLDVVELIM
                     ALEEKFEVEIPDSDAEKLIKIEDVVNYIDNLKK"
     gene            38771..39439
                     /gene="tenA"
                     /locus_tag="RJ318_000150"
     CDS             38771..39439
                     /gene="tenA"
                     /locus_tag="RJ318_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HDV7430058.1"
                     /translation="MMLFSNLIKENQKIWNAYLHHDFVKKLEDKSLKQENFLFYLKQD
                     YIYLLNYAKCYARLALNSNTAKELRFAMKFQNYIVEGEMELHRAILSLGINADELDIK
                     DESLVNIAYSRYMLSVGENGDFLDMLVALSACAIGYAKIGAEIINRLKNENLKDHPYK
                     EWILTYGSENFQNEAKEFEDFVNSYTSSVGAQKFQKLSEIFHTVTRLEVAFWEHSLRM
                     ELNL"
     gene            complement(39463..40320)
                     /locus_tag="RJ318_000151"
     CDS             complement(39463..40320)
                     /locus_tag="RJ318_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoB--CoM heterodisulfide reductase iron-sulfur
                     subunit B family protein"
                     /protein_id="HDV7430059.1"
                     /translation="MQKEYAFFPGCVLSQAAKESKISLEAIAPILGWKLNEIKGWSCC
                     GASQAQCVDPIATLVANARNIALAEEMKMPMLTTCSTCMLTLTKAKNTLDKGAKERIN
                     IFLAQGGMKYQGSTPITSLLWELYEDLDNLKSKVKKPLSNLKVALFYGCHSLRPEDAF
                     GKKESSTNPKSFESVVEVLGAKIVPFEKRLDCCGFHASYPAEKSVKKMSSQIVNNASE
                     NQADCVVTPCPLCQMQLDIYQERFQDYTNSKARLPIIHLSQLVGLALGLSKEMVGLDY
                     NIIDASKIA"
     gene            complement(40324..41289)
                     /locus_tag="RJ318_000152"
     CDS             complement(40324..41289)
                     /locus_tag="RJ318_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HDV7430060.1"
                     /translation="MKIIIDRFNGKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDIT
                     LNFTASCQSAICGACAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDL
                     IVDWEPSIENLRKIRPAMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNK
                     LEADSSDYMQPFVFTHAWRAAADSRGKDPMLHVKPSVMNGLWLCVHCQECADRCPKGI
                     SSVSDIANLRVMAIKKGLNEGLGPDHAEAFYKDLVEGSGRLNEIYLALRSEGVIGSMG
                     KTDIAFKLMRAGKMNPMHVFGEGEIEGYKDLVKMIKAAQEAAVKE"
     gene            complement(41286..43124)
                     /locus_tag="RJ318_000153"
     CDS             complement(41286..43124)
                     /locus_tag="RJ318_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDV7430061.1"
                     /translation="MGEFSRRDFIKTACISVGALAASSSGVYALDDSSKMDKDINLPS
                     CDVLVIGSGGAGLCAAAAVRKENPKLSVVVATKMMPSRNATCMAEGGINGVTDFSNGD
                     SYKLHAYDTIKGGAYLVDQDAALKFCELAGKAIFNMDFIGTLFSRNEQGGVAQRLMGG
                     ASKKRCNYSADKTGHILMHSCLDDAISSGVKFLMNHELLDIGVVDGKCEGVVLRDIQS
                     GGIYPVLCKALVIATGGYTRIFYNRTSTPFIATGDGVAAALRAGLGFEDPEMIQFHPT
                     GVANGGTLITEAARGEGGGYLLNNRGERFMKNYHEKMELAPRDVVARAIETEIREGRG
                     YGEGLGAYVLCDVCHLGKEKILKDLPKIRHTAMLFENIDLVDTPVPIRPTAHYSMGGI
                     EVAKFEDMGTKIAGIYVGGEASCISIHGANRLGGNSLADAVVTGHLAGIGATNYAKDA
                     SFGKGAKTHELAQKWQVRFKEITNNGGNGQEMYELREELGSQNWDNMGIFRTQEKLDL
                     LAKKLEDIQARYEKIRIPNPNEVMNTAFTDYVELGNLILLSRCACLAARNRLESRGAH
                     TREDYPKRDDKNFLKHSIVNLENDELKLSYKDVVVTEFSLDGRRVQ"
BASE COUNT        14464 a         8111 c         5716 g        14984 t
ORIGIN      
        1 ctcttagagt gttaaatatt ctagaattac ttgcaaaaga aaagcttacc ttaagtgcta
       61 tagctaaaaa attaaacatt cctgctggaa ctctttggcc tattttacaa actcttcaag
      121 aaaaaaaata tatcaaatgt gatttaaaaa ataaaagtta ttatttggat tttaagatta
      181 tagaattagg atgtaatata aaaaatgaaa ataatatttt tgaaataatc aaaaagcata
      241 tgaaaaatat aagaaattta accaatcaaa cttgtcaaat gggaatttta aaagatggaa
      301 atgtgcttta tttagaaaaa attgatgcca ataatacagt acaattaaaa tcttttatag
      361 gcacttcgta tcctgcttat gcaacatctt taggcaaagc cttactatca aataaaaata
      421 aaaaggaatt agaaaaactt tatcctaaaa attttgataa aattacagaa aacaccttaa
      481 ataatataaa tgaactctat caacaaatca agcaaattaa aaaagaaaaa attgccatag
      541 aaattggaga aatgaatcct caaattgaat gtatggctat aggcatagaa cataaaaata
      601 aaataattgc tgccattagt atatcttatc taatttattg ctctaataaa gcttttagag
      661 aaaaaaataa aaaaatactt ctagaagaaa aaaataaaat agaaaaagtt ttaaaaattt
      721 attttaatga tttagataca ctgtattaat atagccccga agggctataa aatagagttt
      781 tattcttgtt ctttaagttt taaattttgt tcgccataaa gccctgttcc aacaggaatc
      841 attctaccta gaataacatt ttcttttaaa tcttctaagt agtcaaattt acctgctata
      901 cttgcttcag ttaaaacttt ggtagtttct tggaatgaag ccgcagaaat cacactatca
      961 cttccaatcg ctgctcttgt tacacctaaa agcacaggct cggcaatagc tggttctcca
     1021 cccattctaa tgattctttc attttcttca cggaatttac gtcttgaaac caaatcacct
     1081 tcaataaatt tcgtatgtcc actatctaca acttttactt gtcttagcat ttgagaaacg
     1141 ataacttcta tatgtttatc agaaatcaca acaccttgtc cgcgataaac ttgctgaatt
     1201 tcagaaatca aataataatg caaggctttt tcacctaaaa ttttaagcac atcatgactc
     1261 gaaacaactc catctgtaag tttttcacct gcatgaataa actctccatc tcttacttga
     1321 atatgttttg atttgtcgat taaatactca gcacttgttc catcttctgc ttggataata
     1381 attctttctt tagaacgcaa aggcttatca aaacgaacaa caccatcaat ttctgcaatc
     1441 acagccgcat tttttggttt tcttgcttca aaaagttcag aaactcttgg aagacctcct
     1501 gtaatatcct ttgatttagc tgctgctttt ggagtttttg ctaaaatatc tgcttgagca
     1561 attttatcgc catcatgaac aaaaataacg gtttttggtt caaggtgata acgcacagct
     1621 ttatcacctt ttcctgcaat taccaaagtt ggtctaactc cgctaggtaa atactcatta
     1681 attactaaag aacgcttacc tgtagcttca tcaatttgct catcggcact ataacctgct
     1741 tcaatatcct caaagcttac aacaccatca atttctgcaa tgatagtatt attataagca
     1801 tcccattctg caatcacttt tctttctttt ttaggagcac ttgcaatgat agtatttgcg
     1861 tcatcgattt tttcactatc gttaaattct atcttagatt ctcttgggat atagtgtctt
     1921 tttgcttctc tatcattttc atcagcaatc actacaaaga atcctttttc tttaacaata
     1981 tcaccttttt taacattttt tactctatct aaaccatcgc ctttaaggat gtaaaatttg
     2041 agtgttcctt tttcgcctgc tttgatattt tgaactacag gctcgccatc ttctactaaa
     2101 atttcactcg caaaaggaat acgatttggt acattccaac cctctttaat cacttctacg
     2161 atactttcat tttcttctac ttgcatgccg ctttgatatg gcaaataaag ttttccatct
     2221 atactgccac ttacacctgc taattcattt ggtttagcaa gatcgtattt tcttaatatg
     2281 tattttactt cttgtttttt atctttaata gaaacaatca catcttcatg aatattttct
     2341 atattaatca cacctttaaa tggagttttg atttttggct ccacaagtaa aaccgccgca
     2401 tttctacgat ttgctacgat atttttacct tctttgtttt tataagtttt aagattataa
     2461 aatcttataa aaccttcttt ttgtgcgctt acttgtctat cttgtaaatc cgtacttgca
     2521 gttcccccgc tatggaaagt tcttagagtt agctgcgttc ctggttcacc gatagattga
     2581 gcggaaataa ttcccactgc ttcgcctggt tttactaatt taccttcacc aagattgata
     2641 ccataacatt ttgcacaaat tcctttttta gctttgcagg taataggagt gcggatattg
     2701 acacttttta taccgctttc gccaagaatt tttgcttttt cctcatccat taaagtacct
     2761 tccgcaaaaa gcacagaatt tgtaatagga tcaatcacat cctcagctaa aaccctgcct
     2821 aaaattcttt cttctaaagt ttctataata gaactatctg cggtaatttc attgatttca
     2881 acaccctcat gtgttccaca atcttcaatg gtaattttta cattttgtgc aacatcgatg
     2941 agttttcttg tcaaataacc cgcatttgct gttttaagag cggtatctgc aagacctttt
     3001 ctagcaccgt gagttgaaat aaagtattca agaacattta gcccttcacg gaaatttgaa
     3061 ataataggcg tttcgataat agaaccatca ggtttggtca taagtcctct catcgcagca
     3121 agctgagaaa tttgagctgc actaccccta gcaccagaat ctgccatcat ataaatagag
     3181 ttaaaacctt ctttatcttt ttctacaagc ttcatcattt cttttgaaag aacattgttt
     3241 gtacttttcc aaatatcaat gattttattg tatctttccc ctgaagtaat caaaccgaga
     3301 ttataagaat tttgaatttc tcttacttgt ttttttgctt catcgatagc tttttgttta
     3361 tcattaggaa caataatatc tgcaatcgaa attgaaatac ctgctttagt tgcatattca
     3421 aaacctaaat ttttaagtct atctaagaaa cttgctgtaa tctctaaacc accttgttta
     3481 taaacataat ctacaagcgc agcaatgtct tttttcttta agactttatt ccaactattt
     3541 tcaggcacaa aatcaggcaa gatggattta acaatcaatc ttcctgctgt agtggtaatc
     3601 tttctaccat ctaccatagt ttgtatgctc gcatgaatat ccaaacactt gctttcaagt
     3661 gccatcatca cttcatcaat gcctgtacaa attttatgcg aacctttagc acctgctttt
     3721 tccaacgaaa gataataaat tcctaaaacc atatcttgcg atggaacggt tacagactta
     3781 ccgcttgctg gtaaaagaat attcattgat gaaagcataa gcactttaca ttctgcaata
     3841 gcctcttgag aaagcggtac atgcactgcc atttgatccc catcaaagtc tgcgttaaat
     3901 gctgcacaaa ccaaaggatg aagttgtata gccttacctt ccactaaaac aggatgaaaa
     3961 gcttggatag aaagcttatg caaagtaggt gcacggttta gcataacagg atgtcccttt
     4021 actacctctt ctaaacattc ccaaacttca ttggttttat tttctatcat ttttttagct
     4081 tgttttactg tggttgcata acctttttct tcaagcttag ctaaaagatg tggcttaaaa
     4141 agctctaaag ccattttttt aggtaaaccg cattgatcca ttctaagttt tggacctaca
     4201 acaataacgc tacgacctga gaaatccacc cttttaccta gtagattttg tctaaaacgt
     4261 ccttgtttcc ctttgatgat ttcacttaaa gatttcaatg ggcgtttatt tgctcctttt
     4321 acagcattag cacgacgacc gttgtcaaaa agcgcatcaa cagcctcttg aagcattctt
     4381 ttttcatttc tgataatgat ttcaggtgca tcaagttcca taagtttttt aagacgtgta
     4441 tttctattga taacacgacg atataagtca ttcacatcag aaactgcaaa tttcccacca
     4501 tctaaagcca ctaaaggacg caaatctggc ggtaaaactg gaagatttgt aatcatcatc
     4561 cattcaggac gatttggtac agcttcgtcg ctatcggtat tggcgtttaa atttgaattt
     4621 aagaaatttt ctacaacttt taagcgttta atgatagttt ttttcttagc ctctgaattt
     4681 gtagccccca tttcttcttt aagctgattt aaaagcgcta caagatctaa atttgcaagt
     4741 aaatcacgaa caacttctcc acccattctt gctttaaagc cgctattttc atagcgttgc
     4801 attaaatttt gatattgctc ttcgttcaaa acatcgcaat attccacttt tttagtactt
     4861 tcattatcat agaaagcatc acctgggttt tcaacaatat aagcttcata ataaagcacg
     4921 cgctcaagat ctttcatctt aacacccaaa agcgttccta tacggcttgg aagagaatta
     4981 acataccaaa tatgagccac aggagttaca agctcgatat gccccattct agaacgacgc
     5041 acttttgaat ttgctacttc aacaccacat ttttcacact taacgccttt aaaacgcatt
     5101 tttttgtatt taccacaaag acactcataa tctcttatag gtccaaaaat ctttgcacaa
     5161 aaaagcccat ctctttcagg ctttaaggtt ctataattaa tagtttctgg tttttttact
     5221 tctccataag accatgattt gattttttca ggacttgcaa gtcttagttg aaatgcttca
     5281 aaatctctag gtcttgcatc ttctttaatt tctattactt taaatttact cattatcttc
     5341 atccttatca aaaatctcaa catctaaagc aagagattta agctcattgg ttaatacaaa
     5401 aaatgtttca ggaattcctg ttgctggaac attttcacct tttgtcaatg ctttataggc
     5461 actaaatcta ccttctacat catctgattt tatggttaac atttctctta aagtgtgagc
     5521 cgctccataa gcttcaagtg cccaaacttc catttctcca aatctttgtc ccccaaagag
     5581 tgctttacca cccacaggtt gttgggtaac caagctataa ggtcctgtac ttcttgcatg
     5641 aactttttca tcaaccaagt gatggagttt tagcatatac atacatccta catgaacacg
     5701 ctctgcaatt ttttcccccg tgcgtccatc ataaagttct gttttgccat ccatatctat
     5761 cttagccatt ttaaaaagct tgctaaattc ttctatattt acaccttcaa aaacaggagt
     5821 agaaaattta actcctttac tccagtctct agcatagttt aaaagctctt catcgcttaa
     5881 gcttttaata aattcttttt cgtttgcaag tcttggaata gaacaaattt caagtatttt
     5941 cgctcttaat tctttaagaa aatctttttg ctttctatca aaaatttctt gaatttgatc
     6001 cccaagtcta agtccaacta aacctaaatg actttctaaa atttgaccta tattcatacg
     6061 acttggaacg ccaagtggat taagcgcaat atccacgctc ttaccatttg gcaaataagg
     6121 catatctact tcaggaacta tagttgaaac tataccttta tttccatgac gtcctgccat
     6181 tttatcaccg actttaagct ttctttttgt agcaatataa actttaacaa gcttaattac
     6241 cccacttggt aaaatatcat ctttttctaa aatttcaagc ttttcatcgt gttctgcttt
     6301 taattttttc ttctcatttt ggaaatgatt ttttaaatca tcgtattctt tttgaatctc
     6361 tttagaataa gctttaatca aagttgttaa agtaaaacga ttgatttttt caagttcgct
     6421 aatatctgca gtttgtcctt ttttataatt tttatctcca attttttgat cgctatttaa
     6481 agaggctttg gaaagaagag cacaaacacg aagcatttct tctctatcca tcatcaaaag
     6541 tctatcatga tgctcttttt ctaaagccat tttttcttta tcataagatt ttattgcgcg
     6601 atcatctttt tcatagcctt ttttagtgaa aattttaaca tccacaacaa caccctctaa
     6661 agaagcggtt gcataaaggg atttattcac aacatgtcct gctttttctc caaaaatcgc
     6721 tcttaaaagt ctttcttcag gagttggttt aacctcacct tttggagaaa ccttacccac
     6781 caaaatcata cctggtttga tatgggtacc aatttttgca ataccgctct catcaagatg
     6841 cgcaacatct tcttctttta catttggaat atctttggta atttcttcta taccgtcttt
     6901 tagttctctt gcttcaattt ctttttcata aatgtgcacg cttgtaaaag tatcttcacg
     6961 aataattctc tcacttacaa ctatagcatc ctcatagtta taaccattcc aaggcataaa
     7021 agcgattaaa gcatttttac ctatagcaag ttcgccttga tccatagaag gaccatctgc
     7081 gataatttgt cctgctttta ctatatcacc ttttttaaca atagggtgtt gaatataatt
     7141 tgtattttga ttggttctta aatttttctc catagtgtaa tggtcaataa atggaccttt
     7201 atcatcttca cctaaaatga aaatgctttt attatccact ttctcaacca caccgccacg
     7261 ctttgcttta acagcttccc aagcatcacg cgcaataatt tgttccatac ctgttcctac
     7321 tatcggagct gaagcagtaa gaagtggcac agcttgacgt tgcatgtttg aacccattag
     7381 cgctctgttt gcatcatcgt gctctaaaaa cggaatcaaa gaagctgcaa ctccaacaac
     7441 catacctgag caaagatcga ttaattgcac ttcttcgcgt cttgcaagta tagtttcacc
     7501 atcttgccta gcctcaacaa attcttctac tatattgcct ttagcatcaa ccttagttga
     7561 agctggtgcg ataaacaagc cttcttcttg tgtcgctgta agataaacaa cttcattagt
     7621 cactttacca tttacaactt ttctatatgg cgcttcaaca aagccaagtt catttacttt
     7681 tgcataagta gaaagagtgt taatcaaacc aatattttga ccttcaggtg tttcaactgg
     7741 acaaattcta ccataatgtg tcgcgtgaac atcacgcact tcaaaacctg ctctttcttt
     7801 tacaagtcca ccttcaccaa gcgctgacaa acgacgctta tgagtaacct cgcttaaagg
     7861 gttggtttga tccataaatt gcgaaagctg acctcctgta aaaaattcaa tgatagttgt
     7921 agtaatcatt ttaggattga ttaaatcata aggcattact ttatcaagat ccgcatttaa
     7981 agaagtaaat ttatctctga tcgccttttg catttttgca agacctaaat gaagttcatt
     8041 ggctaaaagt tcacctatag aacggatacg acgatttcct aaatgatctc tatcatcaat
     8101 atgtccttta ccatttttta ctttaattaa atattttgca gttttaataa tatcttcatt
     8161 agtcaaaaca gtaacatact caggtacttc aagacctaat ttatggttca ttttcatacg
     8221 acctaccttg gtaagatcgt atctttcagg attgaagaat aaatcattta caaaagcctt
     8281 cgctgcatct tttaccacag gttcacctgg gcgcataact ttgtaaattc taatcgcagc
     8341 taaatcattt tcatcatcga tattttcact ttgtttaaga agttttagag tttctccatc
     8401 ttgggcaaag gagttaataa tcgctgcatc aacgccatta gccaagtcat ttgctatatc
     8461 aaaacttttt tgctctttaa tcttagcaag cttactctca tctaacaaag ttaaagaatc
     8521 aaataaaacc tctccacttt ctttatcaat aataggattt gctaaataac gattaagtaa
     8581 aatttctaca ggatattcta tccattttaa accgtcttta ataagctgtt ctgctttttt
     8641 ctttgtaagt ctttttccag cttgatgaac gatttttcct ttttcatctt taatatcata
     8701 ttctattcta tccataaaat catttggatt aaattctgtt aaaaatttat cttttttcac
     8761 atgtatagtc tgaataggat aaaacaactt aataatatct tgttttttat accctaaagc
     8821 tctaaaaagc atagttacag gaacttttct acgcttattg attcttacat acaaaacatc
     8881 tttggcatcg tattcaaaat aaagccacga accacgatca ggaataattt gtgctgtata
     8941 aacaagctta tttgcaaccg ttgaactttc ttcttcttta aaaataacac cagggcttct
     9001 atgtaattga tttacaacca ctctctcaac cccgttaatg ataaaagata cacgatctgt
     9061 cattaaagga atttcgcgga tataaatttc ttgttcttta atatctttta cgccaacttt
     9121 ttcccctgtt ttttcatctt tttcatgcag agtaagacgg attttcattt ttaaatttac
     9181 agaataagtc aaacctcttt ccatgcattc gcgaatggta tattttggct tgcctatttc
     9241 actactaaca tattcaagac tcaatctatt ttgcggatca tgaataggaa aaattgattt
     9301 aaaaactttt tctataccac tttcaccatt atcaagattt aaaaaataat caaaactctt
     9361 tttttgtaat tgtagaagat ttgggatttc tatttgtttt gaaatgtttg agaagtctac
     9421 tcttaaacga tttcctaatt tattatctaa catatcgcac atacctcatg gtaaattttg
     9481 taaatttaaa aaagaagacc taaaaattag gtaaaaataa aaaaagaaga cttgccttgg
     9541 caaatcttct tctaacttta aagcttaaaa ttacttaagt tctactttag caccagcttc
     9601 ttcaagttgt tttttagctt cctcagcttc agctttagcc acaccctctt ttagagttga
     9661 aggagtttgc tcaactgcat cttttgcttc tttaagacca aggcctgtaa gagcacgaac
     9721 gattttaata acttcaatct ttttagcacc gccatcagtt aaaacgatat caaattcagt
     9781 tttttcttca gcagcagcta cagcaccacc agctacagca ccaccagcta ccattacagg
     9841 agcagcagac acaccaaatt tttcttcaaa ttcctttaca agttctgata actcaagaac
     9901 acttaaattt gaaatatatt ctaatacatc ttctttagag attgccattt tttatccttt
     9961 tatttaattt attcagattc ttttttattt ttaagcgcat ttaaacctat tgtgaaattg
    10021 gtaattggcg cattccaaac ttgcaaaagc atagcaagca actcattgcg tgaaggcatt
    10081 ttagcaagag ctttaacctt agcaacatct acaacttcgc cttcaatatg agctgttttg
    10141 atttcaaatt tatcgttatt ttcttcaaat ttagcagcta cttttgaaac acttagctga
    10201 tcttcgcccc aaagataaat atttgtatct ttaagaacta gacctgtttt accggaattg
    10261 ttaagagcaa tgttagccaa agtattttta acaatttgaa cttttacatt gttttctctt
    10321 gcattatttc taagctcttc tagttttttt gtgctaagac ctctgtaatt acaaactaca
    10381 atagcttcac tagctttaaa accttcttca agtttagcaa taatctcaac tttttcgctt
    10441 ctagtcacat tttctccttt ccgattgaga tttcaagtag agtggaaatc caattaagct
    10501 tacgcctcga ctatcttcaa tctaaaataa acatttcaaa aaatcaaaaa ttttttcaaa
    10561 tgtttatttt aaaacaaaag agttgcaaaa aagcaactct tatttcatat caagcaattc
    10621 ttgtgtttca agctttacag aagggctcat tgtcaaagat aaagccgcat ttttaatata
    10681 tctaccttta gctgcagcag gtttatgttt gttaattgcc tttacaaaag tgctaacatt
    10741 atcccataat tgttctttgg aaaaacttac tttaccaaga cctgcatgga tatttccttg
    10801 cttatcaaca cggaaattta cctgaccact ttttgcatta ttaactgctt gagcaacatc
    10861 catagtcact gttccagttt taggatttgg cattaaacct tttggcccta aaattctacc
    10921 aactttacca acaagtccca ttaaatttgg agtagcaatc aaaacatcaa aattcatatt
    10981 acctttttga atttcttcta ctaaatcatc gctacccaca atatctgcac cagcattttt
    11041 cgcttcatca gcttttgcgt cttttgcaat tacagcaaca cgaacttttt tacccgttcc
    11101 agcaggtaaa acaacagatc ctcttaccat ttgatctgca tgtcttggat caacattaag
    11161 ttttaaagca atttctacag tctcatcaaa tttagcagac tttaaagtct ttattgtatc
    11221 aattgcatcg cttaaagcat actctttatt tgaatcaatt ttttgtgata attcttttaa
    11281 tctttttgct atcttagcca tttattttct ccgcatttta aagtgctacc gccttttacc
    11341 ttggcggtga aaggattaat ctacgatttc aacacccata gaacgagctg aacctgcaat
    11401 aattttagca gcttgatctc tatctttagt atttaaatct gcaattttct tatctactat
    11461 ttctaaaact tgagcacgag ttaacttacc caccttattt ttaagtggat tatccgtacc
    11521 tttagaaatt ccagctgctt ttttgatcaa atccgtagct ggcggttgtt ttgtaataaa
    11581 agtaaaactt ttatctgcat aaacagtgat aacaacaggg atattaaaac ctgccatatc
    11641 ttttgttctt tcattaaaag ccttacaaaa ctccataata ttaacacctt gctgacccaa
    11701 agcaggacca acaggtggtg atgggtttgc ttttgtggca gcaatttgca atttaatttc
    11761 gcctacgact tttttagcca taacaaatct ccttacttga tataaattaa attattttct
    11821 caacttgaga atataagatc tccactggag ttgaacgtcc aaaaatagaa acatttaatt
    11881 ttaataaacc acgaaccata tcatactctt ctacaattgc agtaaagttt gcaaatggcc
    11941 cttctgtgat tctcacattt tccccttctt caaaagaaat ctttggttta ggcgctgcac
    12001 gattgtgaac tttttccaaa atcaaattaa tatctttttc tgttaaaggg gttggctttt
    12061 tggattctcc aataaaacga ccaacctttg gaagagattg aatgcgatgc caaagctctg
    12121 tatttaaatc aagaagtgca aaaacgtatc ctgaatacaa acttctttcg ctaatcttct
    12181 cctttccatt cttaaattca ataacatctt cagttggaac aacaatttct ttaagttgtt
    12241 cttcaattcc gttatctttt actaaatttt caatggctct tttaactgcc atttcactgc
    12301 cagcataagt ttgaattgca taccatttat gagtactcat ttactctcct tatacgatcg
    12361 cagaaacaat agaggacata agccaatcca ctaacgccaa aaacaaagaa atcaccgcaa
    12421 caaccacaaa aactgtaata taggcatttc ttacctgttc ttttaaagga aaaattactt
    12481 tccttaattc ggcttttgat aatttaaaat aagttattaa tttttccatt tatttaaacc
    12541 ttaattatgg cagggcaaga gggattcgaa cccccaacca tcggatttgg aatccggcgc
    12601 tctaccgttg gagctattgc cctaagggcg caagcttaac tttttagctt aacttctttg
    12661 tgaagtgtat gtttttttaa tcttgggcaa tattttttta attctaattt ttcagtagta
    12721 tttttactat ttttataggt gctataatta atatcaccac attcttcaca ctttaaacca
    12781 actttaattc tcatttcaat tttccttaaa aaattaaagc caagctttta acttggcttt
    12841 attaaattat ttaataattt tagaaacaac acctgaacca acagttttac caccttcacg
    12901 aatagcaaaa cgagttcctt cttcaagtgc tactggagcg atcaagctta cagtaattct
    12961 cacattttca cctggcataa ccatttcaac accatcagct aatttaatcg aacctgtaac
    13021 atcagttgtt cttacataaa actgtggtct atagttgtta aagaatggag tatgtctacc
    13081 accttcatct ttatttaaga tataaacttc agcttcgaag tcagtgtgtg gagtaattga
    13141 ttttggttta gcaagaacca taccacggat aacttcttct tttttagtac cacgaagaag
    13201 aacacctacg ttatctcctg cttcgccttg atccatttct tttctgaaca tttcaacacc
    13261 tgttacagtt gttgtttgag tatctttaat accaacgatt tcgatagtat cacctacttt
    13321 tacaacacct ttttcaattc tacctgtaac aacagtacca cgacctgaaa ttgagaaaac
    13381 atcttcaatt ggcatcaaga agtctttttc agtatcacga gttggagttg gaatatagct
    13441 atcaactgca gccataagat ccataatttt tgctgaccat tcaccatctt gtccagcttt
    13501 agcttcttca agagctttta aagcagaacc agaaataata ggtgtatcat cgcctgggaa
    13561 atcataagag cttaataatt ctctaatttc catttcaact aactctaaaa gttcagcatc
    13621 atcaaccata tctgctttat tcataaaaac aacaatatat ggaacgccta cttgacgaga
    13681 aagaagaatg tgctctctag tttgtggcat agggccatct gcagcagaaa caaccaagat
    13741 cgctccatcc atttgtgcag cacctgtaat catgttttta acataatctg cgtgacctgg
    13801 gcagtcaacg tgtgcatagt gacgattgtc tgtttcatat tcaatatgag aagtagcaat
    13861 agtaatacca cgctcttttt cttctggagc attatcgata ttatcataat ctttaagctc
    13921 tgctaaacct cttctagaaa gaacagcaga aatagcagct gttaaagtag ttttaccatg
    13981 gtcaacatga ccaatagtac caatatttac gtgtggctta ttacgtgaaa atttttcttt
    14041 agccattttt ttcctccgta taaaaaataa attgagcaaa gcaagtctta tatctatata
    14101 attttttcaa ttcatggagc tcatagcggg aattgaaccc gcgacctctc ccttaccaag
    14161 ggagtgctct acctctgagc catacgagcg ctcagaaaaa ttatacacaa taacagacaa
    14221 caaaaactct taaatgggat atatactgta agttaaaggt tttaaaatac agctcccagt
    14281 tcttttaaat tattggagcg ggaaacggga ctcgaacccg cgaccctcag cttggaaggc
    14341 tgatgctcta gccaactgag ctactcccgc aaagcatggt ggtgagtcgt ggattcgaac
    14401 cacggaaggc gaaagccagc agatttacag tctgccctcg ttggccactt gagtaactca
    14461 ccataaaaat attgcttttt caatattctg gtcaaacact gctaaaataa atggagctgg
    14521 ttaagggact tgaacccccg acctgctgct tacaaggcag ctgctctacc aactgagcta
    14581 aaccagcaaa aataaaagta agattataac tcaaaaaaaa aattttgtca agactttttt
    14641 agtttttcta taaaatttta gtcttgtaaa ttttattatc ataaaccaat attattttta
    14701 tctatattat gataatcaaa taaatttaaa aatttctttg ctctttcgct ttttggattt
    14761 ttaaaaaaac ttttaggatc attttcttcg atgatttttc cttcatccat aaaaataatt
    14821 ttatctgcta cagctttagc aaaacccatt tcatgagtaa caataagcat agtcataccc
    14881 tcttttgcaa gatttaacat cacttctaaa acttctctga caatctcagg atccagcgct
    14941 gctgtaacct catcaaaaag cattaactca ggattcatgc ataaacttct tactatggca
    15001 attctttgct tttgtcctcc gctaagttct cttggataag catgaatttt atgcaaaagc
    15061 cccacctttt caagccaaat tttagcctct tttaaaacct catctttctt tcttttttgc
    15121 actttcatag gccctagaag tatattttct tcaacactta aatgctcaaa aagctcataa
    15181 gattgaaaaa ccataccaac tttttgacgc attcttggcc attctttaaa atctttatct
    15241 attttctcat tatcaatata aatattacca cttgcaatct cttcaagccc attaatacaa
    15301 cgcaaaagcg tagattttcc acatccgcta ggacctaaaa tcaccacaac ttctttagcc
    15361 ttaacttcta aattaatatc ttttaaagca tgatgcgaac cataatactt ttgtaaattt
    15421 tctattttta gtatactcat tttagctcca ttttttctct aattttcttg aatataaagt
    15481 gataggataa caaagtataa aaaagataaa aaaaatcaaa ccataaataa taaaaggtgc
    15541 aaaatcattt ctattatgaa attctataat ttgttgccct acttttacaa gctctaccgc
    15601 gccgattaaa taagcaaagg ttgtactttt aatcatacga gtaagtaaat tcatgctcat
    15661 aggagttaaa cgacgcatag cttgtggaat aataacataa gcaaaacttt gcaccgtatt
    15721 taaacctaaa gatgatgcac tttcatactg atgttttgga atactctgca aggaaacacg
    15781 caccaaatcc atcatctcaa aacaacccca aatgctaaaa acaataatag ctgcacttac
    15841 agaactcaaa tcccacccaa accatctagg aaaaccaaaa tacaccacaa aaagccatac
    15901 taaaagtggc ataacacgca caaattctaa acccaaacga caaaaagcat agatataggt
    15961 atttttaaaa ctcattaaaa ttcctaaaaa taacccacct atcgaagtaa taataatgct
    16021 gataaatgaa atttcaagag tgacaaaaag cccttgccag agtcttaaaa gcgtatcggt
    16081 atttaaaagt tcaagcatga agcaaccttt tttcaaactt tagcaaaata aaagacaaag
    16141 gcaaaataat gcataaatat cccataaaca acaaaaacaa tagctcatct gtcttatagg
    16201 ttaaggaatt taaactcttc attaaattca ccaaatctgg caaggcaata atactaacga
    16261 ctgaagtttc tttgattaaa aatataatat tagcactaat acttggcata gaaatagcca
    16321 aagcttgcgg caaaatcaca taacgcaaat ttccaaattt tgaaaaaccc aaagaaagtc
    16381 ccgcttcaaa ctgctgtttt cttatggctt caaatcccgc tcttaaactt tcagccatat
    16441 aagaacctcc taaaaaacta agtcctacta tagcacaagc aaaagaaggc cttaaagttt
    16501 cttctacgct taagcaaatc aaatcaagcg gtggaatttg ctctaaatgt atattaaatt
    16561 taggtaaagc ataatataag aaaaaaagtt gaattaataa aggcgtattt cttgaaaact
    16621 ctatataaag cttgcaaata ttttctaaaa tttttatttt aaaataactc attaaaatac
    16681 aaaacaaacc tattatcaaa gaaaaaataa ttccaaaaaa gcttagtttt atcgtaagcc
    16741 aagcagccgt taaaaaagca ggagcttgag ctaatataaa atcaaaatcc attctctacc
    16801 ttaaatttta ccaaagttct ttcatgatca tatctttatt taaaatttca attctacctt
    16861 tttttgtatc aataagttct gaaattttaa gttcttttaa cactcgagat aaagattgcg
    16921 ctctaacatt taaatcaatt gcaatttgtt tttgtgaaat tgtatctaaa tttttttcat
    16981 tttccaaaag atactttaat aatctcgtcc ttaaatctaa tgcattttga gataatttct
    17041 tttctaaaat tttaatttta tcaaaaagtg aactgataag taaaaaattg aattctttat
    17101 tttcactgca taaattttga aaattaataa aatcaatttc caaaatttct ccatcctctt
    17161 caaaaacagc attagcagga taatttattt ttttaaaagc aggcatttct gctataaaat
    17221 ttggaggatt aaaataatgc aaagtaattt ctttatcact tgctgtactt ttataaatgc
    17281 gtatttttcc cttgagtaaa ataaaaaaat ttttagcctc ttcgccttca taaaataaaa
    17341 tactattttt ttgaaatttt tttaattttc ctacactaga taaaagttct aaataatctt
    17401 tcattatata atatttccat tcttaactta tgttaaattt aatttatctt atttttgcta
    17461 tattaacgcc ataaaattaa catttaagaa aggcttatat gaaatttgaa acaattaatc
    17521 aagaaagcat agcaaaactc atggaaatat tttatgaaaa agttagaaaa gataaggatt
    17581 taggtcctat ttttaacaat gctattggaa caagcgatga agaatggaaa gaacataaag
    17641 caaaaatagg aaatttttgg gcaggcatgc ttttaggcga aggtgattat aatgggcaac
    17701 ccttaaaaaa gcacttagat ctacctcctt ttcctcaaga gttttttgaa atttggctaa
    17761 aactttttga agaaagttta aatatagttt ataatgaaga aatgaaaaat gtcattttac
    17821 agcgtgcaca aatgatagct tcacattttc aaaatatgct ttacaagtac ggcggacatt
    17881 aatttggcaa tttttttgcc aaatcttttt ttaccttttc taaaatctcc tcatccttgg
    17941 aaaaatcaaa aaatttaaac tcatttccat gttgcataaa accatcgagc aaatctccac
    18001 tcaaacgatt tttaagatca agctctgcta ttttaaaccc atctaaagtg ctagcaaatt
    18061 cttttaaacg actcggaatt tctttaagct tagtataaag atagcaagca cttttaagcc
    18121 ctacacgacc tacacggcca cgaagttgat gtaaagtagc aagtcctaaa cgttccgctc
    18181 ctacaatcac tatcatactc aatcttggca aagaaatacc tacttccacc actgtagtgc
    18241 ttagtaaaat atttccctcg tctctaaaac gctctaaaat ttcatctttt tgtttatctt
    18301 ttccatgagt tacaaaaact ttttcataat gactctgcca atattctttg gcctgctcta
    18361 aagaaagata aggaatctta tcactagcac tcaataaggg ataaataatg ataatttgat
    18421 gatttttagc gatttcttct ttgatcttct cgctaagctt agaaaaacct tcattttgta
    18481 tgcaataagt tgtaatatct tttttaaaag gcatttgttt aataaagcta aaatttaaaa
    18541 gttcagattg tatcatgctt aaagttcttg gaataggcgt agctgaaaac tgtataaaat
    18601 gaggggcaaa ttcttgttta tttaaagaat gaattttctc acgctgagct gatccaaaac
    18661 gatgttgttc gtctatcatt acaagtacgg cattatggct ttctaaatga attagagcat
    18721 gagtgcctat aacaagattt gctttttgga tattttgttc taaatctttt tcttttttac
    18781 cccctttaat aaacaaaata ttcataaaat caggtaaaaa tttcttagcc tcttcataaa
    18841 gctgatacgc taaaatacta gtaggtgcca ttaaaatagc ttgcttagga taaaccatca
    18901 aagccgcacc aagtaaaacc aaggttttac cacaccccac atcacccata atcacacgcc
    18961 ttttggcttc ttttgagtgt aaatcttttt ctatgtcttt taaggcatta agctgatctt
    19021 tagtaagaga aaaaggcaaa tctttaagcc aattggctat attaaaaaca ttgatttgat
    19081 gagctttaaa atgcgttttt ttagctttta aacgctttaa aaaattatat atttctatat
    19141 attttaaatc tttgctaaaa ttttgcaaat tttcaaacat aaaaaaactt ttttcatcat
    19201 aagcatgcaa atttaaaaga aaatgtatat atttatcctc tatgccactt tcttttaaat
    19261 tttcataatt aagatattta tgtataaaag cagcaatttt tgtatctttt aaacctaaaa
    19321 tttgatactt tggactaaaa ccctcaaaag aagttaaaat tttaggattg ttaaattgcc
    19381 aagtgtgatt aaaatgcgag agtttagcat taaaaataag ctcttttcct accttacaaa
    19441 taccaaaatg ccaagctcta ggatgaaaaa acacaaaaga aatattttct tgccattcct
    19501 cacaaaaacc taaaccaaaa agttgatttt ttcttgaact aacgcttttt atagtgattt
    19561 tttgggtaca aatttcattt tctttaggat ttttacttgg atttaaattt tcaatttttt
    19621 taggtaaaag aagcgctaaa tcaatagcac ttctaatttt taatttttta aaaaattcaa
    19681 aatcactttc tttaattttc attttgtatg cttgcaaaac ttatatttaa aagctcttga
    19741 tgttttttaa tataagcatt tatggtttca agtttaacct tttccataag ttttaactct
    19801 tctttataat atcccaaatt taaaccttga taaaattcgt taaaagacat agataaacgc
    19861 ttgcttaagc tttcataacg caaaggagtt gatcctatga gaaaattttt agcttgatca
    19921 agttcatttt gagtcatgcc attttttata aaatcttcaa aaagctcttt tacgattttt
    19981 ttagcttctt tagcgctttc atttttagtt tgtaaatatc caaaaactct agaaaaagac
    20041 atattcatat caagcatagc ataagctgag tatgcaagac ctcttttaac acgaatttct
    20101 tccataatcc ttgaaccaaa tcctccttgc cctagcacaa ataaggcaat ttttgcaaga
    20161 tataaatcct tatctttaaa atcagcaaaa aaaggcgtag caaaataaat ataagcttgt
    20221 tcactttctg ggcgtaccaa aatttcatct ttgatgtttt tgcctaactc atattttttt
    20281 ggagtatttt ttttgcctat ttgaagtttt gataagagtt ttaaaagatc ttccttggct
    20341 tgtttttctt ctaaatctcc tcctaaaatc acaaccaaat cactaagatg gataaaattt
    20401 ttataaaaat tttgcaaatc ttttaaagac aaagtttcta tacttttttc atctccatca
    20461 tttggacttt gaaattcttt acatttaaaa atttgagcat tgagtaaatt ttttgctaaa
    20521 taatcaaaat cactattttt actcgcgagc tcacctaagg cattgatttt taatttttgc
    20581 aaagtttttt cttctattct tggttttaaa agcaattttt ctaaactctt taaagcaaaa
    20641 tcaaaatttt ctttcaagca agaaagattg atttccaaac tttcaaaacc actacttgcc
    20701 tctaaattta tcgctctaaa ttctaaatcc ttaaaaaatt tatcatccac gccttcattt
    20761 aaaatacgtg aaaacatctt agctaagcct gctatttcat cataacttct agcacaattt
    20821 ctaaaaacaa gctttaaaac aacaatagga aaatcagaat ttttttcaaa aataaaaggg
    20881 attttaatac ccctactctc taaatactgc attaaaacct ttctaaaatt tcataagcgg
    20941 tattgcgttt agctggattt tcgcctaaac ttctaatcag ccttatcatc tcatcttgat
    21001 tcattctata acttgctcct gcagcactta ctacattttc ttccatcata gttgagccta
    21061 aatcattggc cccaaatttt aaagcaagct ggcctataag tgagccttga gttacccaag
    21121 aactttgtaa atttttaaaa ttatctaaat aaagtcttac taaagctaaa agtcttaaat
    21181 atttgttaga actttgtttc ataatctctg gatgtttttg gattaaagca gtattatcac
    21241 tttgaaagct ccataaaata aaagctctaa atccccctgt ttcatcttgt aattttctca
    21301 aatgctcaaa atgatcgatg atttcttcat cattttcaac cgttccaaac atcatagtag
    21361 ctgtactttt cataccaatt ttatgagctt ggcgatgtac ttctaaccaa gtagctgtat
    21421 cacatttatt tggtgcgata atatcacgca ccctatcgct tagcacctca gcacctgctc
    21481 ctggtataga aaataaacct ttagcttgca atctttttaa cacttcagtg attgaaattt
    21541 tagatgcttt tgcaatataa gcgatctcaa ctgctgaaaa accatgcaca gtgatatttg
    21601 gataatgttc ttttatccaa gaaactaatt cttcatacca ttctattttt aattttggat
    21661 gcaccccgcc ttgaaaaaga atttgtgttc ccccgatagc ttcaagctct tctatctttt
    21721 tgcctatctc ttcaaagctt aaaatataag catcatcttc tttatgatgg cgataaaaag
    21781 cgcaaaaaga acaatcaata caacaaacat tggtataatt aatatttcta tccacaacaa
    21841 aagtggtgat tttttcagga tgaagttcta attttctttt ataagccatt tctccaagtt
    21901 ctgttaaact tgcatggtgt aataaatcta aagcttcttt tttatccagt cttttcaaaa
    21961 tttttccttg ttttttacat aattaaaata attatagcat ttaaaatata aattatgcta
    22021 tagtttcgct tatgaattac attgaactat taaaaaataa taaaaatatc agaatattag
    22081 cttcggttca gtttatagta tattttggag catggttttc tcaaacggga gtttttaccc
    22141 ttttagtcga acttaatgct cctacttggg caacagctac aagtgctatg cttgcttttt
    22201 tacctggagt tttacttgct cctattaatg gcgtcatagt agagaaaaat aaacctaaaa
    22261 aacttttact cagtatgatt agcatagaat taatttctat tttttgtctt atttttgtca
    22321 caagtcttag tatgctttgg cttttattta ttttaatttt cataagactt tgtgttgctt
    22381 cgatttattt tcaagctgaa atgagtttat tggccaaaat tttaactcct caagaactta
    22441 aactcgctaa tgaaatgcac agtgtcattt gggcgatttc ttatacagca ggtatggcaa
    22501 gtgcgggaat ttttatttat tttctaggag ttaaaaccgc ttttctattt gactgtatac
    22561 ttatactcat aggcatttct tttttagtaa gattaagcat tcctgatttt catcaaaaaa
    22621 cacaaagtcg cttttttacc atgataaaag aaggattttt ctatgtttta aacaataaga
    22681 taatttttca tcttatcttg cttcacgctt ttataggttt aactgcttat gaaaccttgg
    22741 ttacgctttt agcgcaacat caatataaag aagttttatc tgctgcttta gtaatagggt
    22801 ttttaaatgc agtacgtgct tgttctttag ctataggacc tatggtttta agcaaattta
    22861 ttaatgataa aaatttattt tacatgtatc ttggtcaagg cttgggtatt atactttggg
    22921 ctttaactca atttaatttt tatatttctt ttttaggttt aatcggtgca ggttttttta
    22981 cctcagcgct ttgggcttac acctacacta tgatacaaaa aaatgccgac aaagaatatc
    23041 atggtagagt gatcgcttat acagatatga tttatcttag ttttagcgct attatttcaa
    23101 tgcttatggg ctttttattt gaaataggct tgagtttaga actaattaca ggcttattgg
    23161 gtatgatttt tatctttgcg gcattttatt ggaagtggtt ttataaaaaa tatttgtgaa
    23221 aattcacaaa tattttaaat tttaaacaaa tcttgaagat ttttcattgc ttcttcattg
    23281 ctgatggcat tatttagctg cgatgagctt aattcattga gctctatttc ataaccactt
    23341 aacatagaag caaggcgaat attaatacca ttttttccta tagctttgct tttttgttcg
    23401 ctatttaaac ttacaatagc ttttttatct tcaattttta cagaatttac aatagcagga
    23461 gccaaggcac gagaaattaa aatttcactc tcatttgtaa attctataca atcaatattt
    23521 tcattatgaa gctctttgct taccgcatta attcttacac ctttaacacc tactgtagct
    23581 cctacaggat cgatatttgt tccattggcc tgaagaatga tttttgctct ttcacctgga
    23641 attctagcac atcctataat attgacataa ccatctttga tttctggaac ctcagcttca
    23701 agtaaacatt ctaaaaattt aggacttgta cgactaagct cgattttaat acccttatct
    23761 gtataaacac ggcgtatcac agcttttacc acatcaccta ttttaaactt ttccccttta
    23821 atgcgatttt ttctcggtaa aaaagctctt aattcatcta tttcaataaa agtattttct
    23881 tcattatcca ctctaacaac tgtaccaaaa accatttgcc ctactttgtt tttatacttt
    23941 tcaaaaatag tttgttctaa taatttttgt atatgatatt caagttcttt atgcaaggta
    24001 tttaccgcag ttcttcctaa attttccaaa gaacattcat aggttaattc atctcctatt
    24061 tcaacatctg gagcttctga ttttgcctta cttaacgcga taaaactctc acttttattt
    24121 tgcaatctct cgtcattatc tgctactatg gtaatttttt gataaagatt taaattttta
    24181 ggatccacaa aaaactcata ttcttgtcca taaattcttt ttgcagtatt gattaaagcg
    24241 gtagctacct tttctcttac attctctaag tttaaatttt tttcattagc aatagattcg
    24301 ataatatctg ctatcttttc catattttat aaaacctttt ttgtgggaaa tttaaataat
    24361 gtagataaaa attatatcct taataagttt aattaaaagt aaaatttgct aaaattatag
    24421 attaaaatga aaattcttaa ggatttagct atggaattaa aattggcaag aactttgatt
    24481 aatgaaaaac ctaaaaatat tagcctagaa aaaatcgaag aggctataga aaaagaagga
    24541 caaaagtttt tttattttga taaagataat acacacaaac aactcattgc ccttgtaaat
    24601 cattttgaaa aaaaaggagt aagcatttat catagaaccg taaaatacgg acttgatgat
    24661 aatgatttta tgtatgaggt acatattctt tgagtgctaa aaaacttttt atccaaactt
    24721 taggttgtgc gatgaatgtc agagattctg agcatatgat cgcagaatta acacaaaaag
    24781 aaaattacgc actaacagaa gatatcaaag aagcagatct tattcttatt aatacctgtt
    24841 cagtgcgtga aaaacctgtg cataaacttt tctcagaagt gggtggcttt gaaaaagtta
    24901 aaaaagaagg tgctaaaata ggagtttgtg gatgcactgc atcacatttg ggaaatgaaa
    24961 ttttcaaacg tgctccttat gtggattttg ttctaggggc aagaaatatt tccaaaatca
    25021 ctcaagctat aaaaactcca aaatttatgg gcgtggatat agactatgat gaaagtgaat
    25081 ttgcttttgc agattttaga aatagtattt ataaatccta tattaatatc tccataggtt
    25141 gtgataaaca ctgcacttat tgtatagtgc cacatactag aggagatgaa atttccatac
    25201 cttttaacat catctacaaa gaagctcaaa aagctattga aaaaggcgct aaagagattt
    25261 tcttgctagg acaaaatgtc aataactatg gcaaaagatt tagaaacgaa cataaaaaaa
    25321 tggacttttc agatctttta gaagaactta gcactataga aggtttggaa cgcattcgct
    25381 ttacaagtcc acatcctttg cacatggatg ataaattttt agaagttttt gccaataatc
    25441 caaaagtttg caaatccatg catatgcctt tacaaagcgg ctcaagtgaa attttaaaag
    25501 ctatgaagcg tggctatact aaagaatggt atttaaatag agctttaaaa cttagagaac
    25561 tttgtccaaa tgttagcatt tctacagaca ttattgtagc ttttccaggg gaaagtgaaa
    25621 aagattttga agagactgta gatgttttgg aaaaagtgcg ttttgaacaa attttttctt
    25681 ttaaatactc caaacgccct ttaacaaaag ccgcaaccat gcctaatcaa atcgatgaag
    25741 aaatagcttc aagaagactt agcaccttac aaaatcgtca tagtgaaatt ttagataaaa
    25801 ttgtaaaaaa acaagaaaat aaaactttta aagttttatt tgaagaatta agagcaggca
    25861 atagcattgc tggaagaaca gataataact ttttagttca agttgaaggt agcgaagaac
    25921 ttttagggca atttaaagaa gtaaaaataa ctaatgcaaa gcgtatggtt ttatatgggg
    25981 aaatcgttta aaatccattg cttaacatat ataattttca tcttacaatg gcttattttt
    26041 ttaagctgta aaaagcacta taaaggtgaa aaagttgacc gtaaagctgg tgtgatactt
    26101 ttttggcatg gaaaattagc actcatgcct tttgcgttta gacattatag acaaaaaaat
    26161 aaaaaagcct atgtcatgat ctcccaccat aaagatggag agcaaattgc aaaaatcatc
    26221 aagcttttcg gtcttgatac tgtaagagga agcacttcaa ggggtgctag cagtgcactt
    26281 agagctgcat ttaaagtttt agaacaaaat gacgatatag ttatcacgcc cgatggtcca
    26341 cgagggcctt atcatagtat ttcagatggt tctatcattt tggctcaaaa aaaagaacta
    26401 aagataagaa ttttaaacta tgaagcaaat cgtttttgga aatttaaaag ttgggataag
    26461 atgatcttgc caaaaccttt tagtaagatt acttatagtc taagtgaacc tttggatatt
    26521 ttatctttag ataaagaaaa agctaaagaa tttctaatga aacaatttga taaaattagc
    26581 ttagctgatc aatttaagga atgaaatgtt atttttactt aaaaaaatat ttccacaact
    26641 ttttattagt attattttag aagataaaaa aaatattgta aaagcttcta tttatagagg
    26701 aaataaacta atcagtagca atgaaaaaac ttttgataaa agtgaaaatt tattagagta
    26761 cataaaaaat ttaagcaagc atttcttatt ttaccacact gctttatttt tagacgccaa
    26821 agaacaagga ttaataccta gtacaaatat tcaagattgt gagcacttta atataggaaa
    26881 aatcagctta cagcatattt tgcttaataa tgcccttgtt tatacggcta ccgaacatgt
    26941 agaatattat agcgagcttt ttgaagaata tagaggttta gattttttat attccccttt
    27001 tgctcttctt tactacaata tgcaaaaaga aaaacagcct gatgatcaaa ttttacttta
    27061 tggatttaag caaggatatc ttttggcaat tattgttgct aaaggcaata ctattttata
    27121 cggtgatttt aaaatatttg agcaagaatt aggtttagag cttgaacttc catcagaaga
    27181 taatcaagaa attgaaaaca acaacgatga tactgaagtt accttagata acttcaatga
    27241 agccttaaat aataaatttg atctacttga tcaagaaaat aatcttgaaa ctttggataa
    27301 taatgataat tttaatcttg atgaattaaa tcaatttagc aatgatatgg aactttgccg
    27361 ttatattatt acgagcattg aaaaatttta taatgatgat aaatatgctg gggtatttat
    27421 caatggtatt ttattatata gcgaatcaga tattaacata aatgctattg attttttaga
    27481 aagtgaaact tttttagaga taaaaacgaa acaaatcaac accttagatc ttatgataga
    27541 attgatgcga aaggaggtta aatgacttat agctttatac agccaagaaa aaaacctatt
    27601 ttcacactct ttgataaaat ttggctagga ctttttggtt ttagtatatt atttatctta
    27661 ctagtatatt ttacatatac aataaaaatt gcattaatca atagctctat cgatgatgaa
    27721 aaacaacaag ttatagtgct tcaaaatcaa actaagcaaa atgaaatgct ttatgaaatt
    27781 ttatttgatc aaagccaaat agcgaaaaat tttaacactc aaaatcaaat tgttaaagaa
    27841 agcttaagaa atctatttga tattattgta aaaactgata atattactct tgaaagtgtt
    27901 gaacaagacg aatattcctt aaaacttatc ggagtcactc ctacaagaga aatgtttact
    27961 ctacttttag aaaccccttt aaaaagcatc tttgatcaaa gctacacaac ctattatcgc
    28021 ttagataatg ggtggtatcg ttttgttagt attagcaaac aaattccagg agttgcagat
    28081 gaaagataaa agcctagaag aaattgattt attaaagctt atcatttgcg cgttaagttt
    28141 tataagcgtt tgcacagcct tgatcttatt tttactttta ccgacattaa aaaattacaa
    28201 acaagcaaat cttagagaaa attcacaact tgctatctta aaagctgcta aatcaaaatt
    28261 tgactttagc gaagataaaa tatcaactct aagaagcgaa aacaacaaaa gtttagagca
    28321 atttgagcaa aattttaata taggaaattt taatattttt ttacaaaaat attttcaaaa
    28381 tgtaaaaatt caagaaacta agcccgaaaa acaagaaaaa tatctaaaaa accgcttagc
    28441 cattaaagcg acaatgaata atcctagaag actttatgat tttattgatg ctctaaaaaa
    28501 ctataataat ttaatcaagc ttgattatcc acttaatctt aaagcaggag agcaaggtat
    28561 ctctatagat cttactctca aagtttattc aagctaaact cacatcttcg ccttttaaaa
    28621 tttgattcat agtattcatt gcacacattt ttccacacat ggaacatgag tttaaatcat
    28681 cagggcgacg ctcattaaac atttttttag ccttttctcc atcaatagca agtttaaaca
    28741 ttttctccca atctatctct tgtctagcct tactcatctc atcatctctt gctctttctt
    28801 ttggaagttt agctatatct cccgcatgag ctgcaatttt agtcgcaact ataccctctc
    28861 taacatcttc taaatttgga agtcttaagt gttcagcagg tgttacataa cacagcatat
    28921 cagcaccgct agctgcagcc acagctcctc caatagcacc actaatatga tcataccctg
    28981 cgccaatatc tgttaccaaa ggtcctaaga cataaaaagg cgctcctttg cataaacgct
    29041 tttctaattg catatttgcc tctatttcat taatagccat atgccctgga ccttctatca
    29101 ttacttgaat cccaacatcc caagcccttt gagtaaggag tgataattct ataagttctg
    29161 aaatttgtgc cccatcactt gcatcgtgag tagagccagg acgcaaagca tcgcccaaag
    29221 ataaagttac atcatatttt aaacaaatgt caagcaaatc atcataatac tcaaaaaaag
    29281 gattttcagc atctttcatc atcatccaag cataaagtac agagcctcct cttgaaacta
    29341 tatttgtaag tcttttactt tgtttaaaaa tatgcgctgc gcgagaatta atacctgcat
    29401 gaattgtcat aaaatcaacc ccacttttag catgatgata tacaacatct aaaaagtctt
    29461 tggcattaat ttgctttaaa tctttttcta aaaatcctac cgcatcatat acaggaactg
    29521 ttcctatcat agcttttgaa acattaacaa gctcgtctct aaaacgactt gttttgccat
    29581 aattgcttaa gtccataatc gcttctatgc caaatttatg agcaagctct acttttttca
    29641 tttcctcgct ataatcaacg caatcatttg aaactcctaa atttacatta accttagtac
    29701 gcagtccaaa acctatacca tttggatcaa gacttttatg attaatattt gcagggataa
    29761 taattttacc gcaagcaata ttttcaagca aaaaatcttt acttaaattt tctttttgcg
    29821 caacaatctg catttcttta gtaaaaatac cttctttggc ataattcatt tgagttttca
    29881 taaatttatc ctttaaaaaa tttggataaa tgaagggtga gtataaattt ttaaagtatt
    29941 gaaatttata aatcttcccg acgctggtat tatccagatc cggttcggtc taagctttta
    30001 gcttactctc agcctgttac acaagctccc gtcatttatg ttttaattat acactttaaa
    30061 tatttatttt tgctttatac gtgcagtttt tgtaaaattt ataagttctt ctgtagtttt
    30121 tatatgataa ggaagttttc caaggcaata tttaaaaatt tcagcagctg ccaaagcatc
    30181 atctaaggct ctatgatgca tattttccac gccaagaaat tctttcaaaa cctctagttt
    30241 atattttgga ctttctatac aacattgtgc aaattctata gtgcaaatac gacgattaag
    30301 caaaatgcca aaaccacact catttaaagc cttagaaata aaactataat caaaacgcac
    30361 attatgcgct acaaaaatac tgtcttttaa aaaaagccta aaatcactta aaacctttgc
    30421 taaacttgaa gcattttcca ccatctcata agtaataccc gtaagttcag ttatattttt
    30481 tggaatttct tttactttaa caaaactttg aaagcgtcca atttctttag aattttgaat
    30541 ttttaccgct ccaatttcta aaatttcccc cttgctcacc ccaccagtac tttctatatc
    30601 cactatgcaa aaaatttcat ctttaatttt tgttgtgcgt gttttaagag taaaaatatt
    30661 atctttattt aaagttaaac ctaaccccaa aagctcaaaa gtttctaaat ctaaatcaaa
    30721 attttttaat tcttcaactt tggcaaactc ttgcatcacc caatcataag gcttgctttg
    30781 cttatttaat atagaaataa tctgatcaat ttgctgtaaa ctcaaaattc aagctttaaa
    30841 gatgaaattg cagttttata atcattggaa gaaaaaatat aacttccagc caccaaaata
    30901 tcagctccag attcttctaa atcactagca tttaaaccat taacaccacc atcaacctct
    30961 ataaaaactt tagcattttt tttatcaatc atttggcgca attctttgat tttttcatgt
    31021 atcaaaggta aaaatttttg cccaccaaat ccaggattaa cactcattaa aagcaccata
    31081 tctacaaatt ctagcatgtg tttaatagaa tcaataggag tatgtggatt taaaacaata
    31141 gcaggatgga ttccttgact tcttatatat tcacaaagcc ttataggatg aacttcgctt
    31201 tccatatgaa aagagataaa tttcggtttt aaagagataa aaagatctac aaatttactt
    31261 acatctttaa ccattaaatg cacatctaat ggcaacttac taatagttga aattttttcg
    31321 atcacgcaag gtccgaaagt caaatttgga acaaagtgtc catccattac atcaatgtgt
    31381 aaaagatccg cacctgcagc ttcaatagct ttaacttctt cttctaattt caaaaaattt
    31441 gcagacaata aacttggagc tacatacatg atcaaaacct taaactatat ataaatgtga
    31501 taaataatat tttatcgact tatatattaa aaaaactata aattatggaa tattttaagc
    31561 ttaattttga taaaatctcc atttaaaaat tttcataagg acaaaaaaat ggcaagagta
    31621 tgtcaaatca caggcaaggg tccaatggtg ggtaataatg tcagccatgc taacaataaa
    31681 acaaaaagac gctttttacc taatctcaga acagttcgtg taactttaga agatggcacc
    31741 acgagaaaaa tgagaattgc agcttctact ctaagaactc taaaaaaaca aaattctaaa
    31801 taattttgag gatttattcc tcaattttaa aatttccaat ttaaaaataa actttaacaa
    31861 atcacttata taacacacat ttaaaaatta ttattaattt tattattttt taagctaaaa
    31921 atatctttta atagtgtaaa ataccttatt aaatgaattt taaatttcac taatacaagg
    31981 agagtttatg ctacatgaat atagagaatt aatgtcagag ctaaaaggta aagatgctca
    32041 ttttgataaa ctatttgatc gtcataatga acttgatgac atgattaaag atgcagaaga
    32101 aggtagaact tctcttagca gcatggaaat ttcaacttta aaaaaagaaa agcttcatgt
    32161 aaaagatgaa cttagccaat atctagcaaa ttataaaaaa taaggcaaaa caatgtttgg
    32221 aagtaaaata aaccattctg atcttcaaaa acttgaagaa gaaaataaaa atcttacaca
    32281 taaaattgaa aaatttcaat cggaaaattt agaattaaaa aataaaatta catcattaga
    32341 acaagcggct ttagagtcta aacttaaaac agatctttta aatgttttat taactggggt
    32401 tttaaaaaat attactatta ttcaaggcga tatgttagaa aatgtaaata aggcagaagt
    32461 tatctctagc tattctaaaa cttctcttgc tgaaatggat gaacttaacc atattgctaa
    32521 ttctatcaat gcctctttgg gaaatattac agaatcagcc aataaaacaa gagatgttgc
    32581 aggaacattg catagaagtg tagatgaaat tactaatgta attaatctaa ttaaagatgt
    32641 ttccgatcaa accaatcttt tagctcttaa cgctgccata gaagctgcac gcgcaggtga
    32701 acatgggcgt ggttttgctg ttgttgccga tgaagtaaga aaactagctg aaaaaacaca
    32761 aaaagcaacc acagaagttg aaatgaacat caaccttcta aagcaaaatg caaatgaaat
    32821 gtatactcaa agtgagcaag ttgaaaaaat ttctatagat tctaatgctc atattatgag
    32881 tttttccgaa aaatttactc acttagtaaa tgaagcgcat tctactaatt caaatgcagt
    32941 tggtatcgct tcagaagctt tcgtatcttt agcaaaacta gatcatatag cttttaaatt
    33001 aaatggttat aaagaaattt tttccaaatc aggaaagcaa ttagccgatc atacatcttg
    33061 tcgcttagga aaatggcttg ctagcacagg aaaagaaaga tttgggcaaa ataaaagctt
    33121 cttaaaaatt aacgagccac atgaaaaagt tcatgaaaat atgaataatg ctataacaat
    33181 agcaaataca gaagatatta gcaaagatat tactcaacac agcataatta ataaatgcga
    33241 agttgctgaa aatgcatcgc ttgatctttt caatgtattt aaagaaatgc ttgatgagtc
    33301 agatcattaa aatcctaggt tgaacctttt taaggtttaa cctaaataat ctttaatttt
    33361 ccccactttt cctttaaaaa ccacatataa gcaaaatcaa gcaaaggcgt tcttatcata
    33421 tttttacatt ttttttcaaa atcctgcacc ttaacataaa cagcttcaat ctcttcatca
    33481 tcaactccac ctccagaaga aattttatct ttttcatcaa cttctacgaa ataaaagctt
    33541 tgcttgctta cacctgaacc aaaccctgta taaaaatctc ctattttttc taaattttta
    33601 ggagcatatc ctagttcttc tatacattct tcttttgcta tttcctctaa agataatttt
    33661 ttatccacaa gcccagaaca aagctctata gtatagccca tatcatcatc ttttacataa
    33721 tctttatcat gcatttgatg ataccaaagt ggtatacgaa attggcgtac aaaaataaaa
    33781 ctttctaatt ctttatgata caaaagcact gaaacactat ctttagattc tataaaatcc
    33841 caagtgcaaa gcctaccatt actttcataa gcaaatctct taggcttaat ataatttgat
    33901 ttttcaaaag aaagttcttt taaattttta aacgccataa taaaaccttt tatttatttt
    33961 tcacattgta ctttattttt gcttttttga aaatataaag gtgattaaag ccttaaaaaa
    34021 ttaaaaatca tatttataac ttaaccaaaa acttcttcct tctgtataat cttgatagcg
    34081 atttgcatat ccagcaggat tagccccatc ccatcttgta acttgcggat caaagaaatt
    34141 tttatcaaaa agattttgca ctgcaaaact taagctagat tgcttattga ttttataatt
    34201 tatccctaaa tctactatat aaaaaggctt atatttttgc catggcaaac taccattacc
    34261 accaactctt gctttagcta tagtatcgag tcttgctcgt gtttttatat aggaattaaa
    34321 tttacctcgc tcatagttta attttaacat tgctatatgc cttggtaaat tttctattct
    34381 atcaccacca aaccaatttt tttgactatc tttatagcga ttatccataa aagtataact
    34441 tgaatttagg ctaaaaccat tgtaagtttt ggtattaaat gcaaattcta tacctttagt
    34501 ctgtgttttt ccaagattaa taggacgctt acaaacagtg ccattgctac aattaatacc
    34561 attttgcata cctgttaaat attcactact gatttgattt gtaaaatcag taataaatcc
    34621 tgtgatagaa taatgtgcaa aatcaaatac cctaaaatca gcacccaatt cataatttat
    34681 actttcttct ggttttaagt cagggtttcc aaaaagagca ttgccattgg cataattata
    34741 atatccattt gtcaactgct tggcagaagg agttttatag ccttttgaaa cacctccttt
    34801 aaaggctata ttatcattta agtgataaac caaataaatc ctaggggtaa attcagaatc
    34861 aaacaaattg ctataaatat aacgcaaacc tgtagtaaaa atcaaatcat cggttataaa
    34921 atactcattt tccccataaa gcgcaaccat ggtttgatca agatttttac ctcttattta
    34981 actacctgcg cttgcttgat cattttttaa catctcataa tcaatccttg caccaaaggt
    35041 atttactaaa ttaccgtatt gacctaaatt ccaaggtaaa acaaccttac cttctcctac
    35101 ccaaatttga ctatgtaatt ccttatcctt agtgctacca tattgtaaat atgagttagt
    35161 tgaaccaaaa tcatagttac catcatgatt taaaacaata ttatccttaa aaagttgttt
    35221 ttcactttta atagccctac tacttataga attcactgaa atttcattaa tatatcgctc
    35281 tatatcaaaa tatatattat ttttatcatc tactgtccaa ttaagcctag aaccaaaacc
    35341 taagctagta aaagcacctg gactatgaat agcaatttgg taattatcag gtctttgttg
    35401 gtaattatca ggtttttgat tgttattatt ccaaaccggt gtaggccatt ttaaatcaga
    35461 agctgcctta tcataatact tcaaccttgc agaaattgat aatgtatctt caatcaaagg
    35521 agttgctaca taagcattaa aacgcccgca ttgccatagt gattagagtg ctgttgcaaa
    35581 agagtattaa attctatatt tgcttcgatt ttatcaggat ttttcttggt gataatattt
    35641 atcacaccgc ctacagcatc actgccataa agtgtagaag ctggaccacg tataacctcg
    35701 atacgctcta tcatagataa aggcggcaga tatcctgact cactgccttt aaaaacatta
    35761 gtataaaacc catttgcaac actttgacgt tttccatcaa ttaaaactag agtataagaa
    35821 ctaccaaaac ctcgtatgct aaaatcataa gtgcctgttt tatccatagt cacatctaca
    35881 cctggaatat ctcctatagc ctcccctata tccttaattg gctttttttc aagctcttct
    35941 tttgtaatga tagaaatact agcaggcgca tcaaccaaat cttgttcaaa accactagcg
    36001 ctaaccacaa catcattaag ttgatatgtt tcttctgctt ttaacaaagc tccagataaa
    36061 attaaaaaac acagtaaact ttttttaaat ttcatatttt tgatttgagt caaattaatt
    36121 cctttaaaaa aaattatttt gatatttaaa atcatttttg gagtataaaa aaagaatact
    36181 tttaattaac ttaattttga taacaattat aaataataaa attatttaaa aaagcgaagt
    36241 aaaagcctaa gcctcttgat aggctccaag ctttaaaatt ttctgcatac gatttgcaga
    36301 aagttctcgt acatcaatat tttcaagttc atttagggat ttttttacat aatcagcaat
    36361 agctactgct gcagcttctt tattgcgatg tgcaccattt gtaggttcgt ctatcacatc
    36421 atcaattaaa ccttgagatt ttaaatcatc agctgttact ttcatagctt tggttgcagc
    36481 ttcacttttt gcaggatcat tccaaagtat tgcagcgcaa ccttcaggag aaattactga
    36541 aaaaacagaa tttttcatca ttgcaagttt atctgcaacc cctatagcta acgccccgcc
    36601 actaccgcct tctccgataa ctatagcaat ggtcggtatt ttcaaatcac ttaattcata
    36661 taaatttcta gcgatagctt cactttgtcc tctttcttca gcacctattc caggataagc
    36721 acctggagta tctatcaaaa ataaaatagg aatttgaaat ttctctgcaa gtcctgctac
    36781 tcttaaggct ttgcgatatc cttcaggatg tggcatccca aaatttctag cgattttatc
    36841 ttttgttcca cgtccttttt gctcaccaat tacaattatt tttttctctc ctaaataacc
    36901 cataaaacaa acaatagcag gatcatctct aaaggcacga tcaccatgta tttcgtgagc
    36961 gtcatttaaa ataagttcaa tatagtcaag agcataaggg cgatctggat gacgcgctaa
    37021 ttgcaaacgc tgaaaatcac ttaaattctt ataagtttta gaaatttctt tttcaagatt
    37081 tttctttaaa attgatacag cttcagtatc tcctttaatc tgagcattga taatgtcctc
    37141 gtcaatttgc tgaatatttt tttcaaaatc taaataagaa gccatattaa tctacttttt
    37201 taaatacaac acagccattt gtgccaccaa aaccaaaaga attactcatc accactttta
    37261 aatctacttt tcttgatata tttggaatat aatcaagatc acattcatca tcttttacaa
    37321 gctgattgat tgtaggtgga actaccccat ctcttaaaac cataacacta acaactgctt
    37381 caattgcacc tgcagcaccc aagcaatgac ctgtttgtcc tttggtggaa cttataagcg
    37441 ggatattatt gccaaaaagc tctttaattg ctgctgtttc atttttgtca tttacagggg
    37501 ttgaagttcc atgtgcattg atataatcta cctttggatt ccctgccata tttaaagctt
    37561 ttttcatagc ccttaaaggc ccatctaaag ttggtgaagt aatatgatgc gcatctgcac
    37621 tttctccaaa tccaattaat tcagcataaa tcgtagcacc gcgtttttta gcctcttcat
    37681 attcctcaaa aactaaagct ccagcacctt ctcccatgac aaaaccatct ctttctttgt
    37741 caaatggtct tgaagcatgc tgtggatctt catttctagt tgataaagct ttcattgaag
    37801 caaaaccacc tatacccaca ggacaaatcg cagcttctgc acctatgact aacatctttt
    37861 tagcatttcc caaagctata cttttataag cttctcctat agcatgagtt cctgctgcac
    37921 aagctgtaac acaagaaata tttggccctt taagtccatg ctctatagaa atcaaacctc
    37981 ctaacatatt tacaagtgct gaaggtatga aaaaagggga aattttacgc ggacctcgct
    38041 cggaacaaat aatggaattt ttttctatgt taggcaaacc tccaatacca gaagccgaaa
    38101 caatgccaaa ttcttcttta tctaattctt cactaaatcc agcatcctgc attgcttctc
    38161 ttgctgcttt aattccaagt tgtatgaaac ggtcaatttt ttttacttct ttgccatcaa
    38221 caacctctaa tggatcaaaa tttttaactt cagctgcaat ttgaacagga aagtccgtag
    38281 catcaaaaag agtaatttta tttactccgc tttctccatt gcaaattgct ttaaatgaac
    38341 tttctttatc taaaccaagg gcattgatca taccaatacc tgtaactaca actcttttca
    38401 agaataagct ccttgcaaga aaaaaaatta tttttttaga ttgtcaatat aatttacaac
    38461 atcttcaatt ttaattaatt tttcagcatc actatctgga atttctactt caaatttttc
    38521 ttctaaagcc ataataagct ctacaacatc taaagaatca gcacctaaat cttcaataat
    38581 ttttgattcc attttaactg catctgcatc aatacttaat tgctctacta ctactgcttt
    38641 tacatcatca aatgttgcca tttgttctcc tttaaaaaat taaaataaag cgtattttac
    38701 tataaaaagc ttaaaatatt tatagttttt cattatactt gaaaataaaa tattaaaaca
    38761 taaaggaaaa atgatgcttt tctctaattt aatcaaagaa aatcaaaaaa tttggaatgc
    38821 ttatctacat catgattttg ttaaaaaatt ggaagataaa agcctaaagc aagaaaattt
    38881 tcttttttat ctcaagcaag attatattta tttgcttaat tacgcaaaat gttatgcaag
    38941 attagcactt aactcaaata ctgcaaaaga acttcgtttt gctatgaaat ttcaaaatta
    39001 tatagttgaa ggagaaatgg aacttcatcg tgcaatttta tctcttggca ttaatgcaga
    39061 tgaactcgat ataaaagatg aaagtttagt caatatagcc tattcgcgtt atatgttaag
    39121 cgtaggtgaa aatggagatt ttttagatat gttagttgct cttagtgctt gcgctatagg
    39181 ctatgcaaaa ataggtgctg aaattataaa tcgtttaaaa aatgaaaatt taaaagatca
    39241 tccttacaag gaatggattt tgacctatgg aagtgaaaat tttcaaaatg aagctaaaga
    39301 atttgaagat tttgttaatt cttatacttc aagtgttggt gcacaaaaat tccaaaaact
    39361 cagcgaaatt tttcatactg taacacgctt agaagtggct ttttgggagc attctttaag
    39421 aatggaatta aatctttaaa catgggcttt ttgcccatgt ttttatgcaa ttttacttgc
    39481 atcaataata ttataatcta aaccaaccat ttctttagaa agtcctaatg caagtcctac
    39541 taattgtgat aaatgaataa taggcaatct tgctttagaa ttagtataat cttgaaatct
    39601 ttcttgatag atatcaagct gcatttgaca aagtggacaa ggtgttacaa cacaatcagc
    39661 ttgattttca cttgcattat tgacaatttg actagacatt tttttcacag atttttctgc
    39721 aggataagaa gcatgaaaac cacaacaatc aaggcgtttt tcaaaaggaa ctattttagc
    39781 ccctaaaact tctactacac tttcaaaact ttttggattg gttgaacttt cttttttacc
    39841 gaaagcatct tcaggtctta aactatggca accataaaat aaagctactt ttaaatttga
    39901 aagcggcttt ttcaccttgc tttttaaatt atccaaatcc tcataaagct cccacaaaag
    39961 acttgtaata ggcgttgaac cttgatattt cattccacct tgtgctaaaa aaatattgat
    40021 gcgttctttt gcacccttat caagagtatt ttttgcttta gttaaagtta gcatacaagt
    40081 actacaagtt gtaagcattg gcattttcat ctcttctgct aaagcaatat ttcttgcatt
    40141 agctaccaaa gtcgcaatag gatcaacaca ctgcgcttga gaagccccac aacaactcca
    40201 ccccttaatt tcattcaact tccaacccaa aataggtgca atagcttcaa gtgaaatttt
    40261 agattctttt gcagcttgag ataaaacaca acctggaaaa aaagcgtact ctttttgcat
    40321 attttactcc ttaacagcag cttcttgtgc cgcctttatc attttaacca aatctttata
    40381 cccttctatt tcaccctcgc caaaaacatg cataggattc atttttcctg cacgcataag
    40441 tttaaaagct atatctgttt tacccataga acctataaca ccctcagaac gcaaagcaag
    40501 ataaatttca ttcaagcgtc ctgaaccttc aactaaatct ttataaaaag cttcagcatg
    40561 atcaggccct aagccttcat ttaaaccttt tttaatcgcc atcactctta aatttgctat
    40621 atcacttact gaacttatac cctttggaca acgatcagcg cactcttgac aatgaacaca
    40681 aagccaaagt ccattcatta cgctgggttt tacatgcaac ataggatcct tacctcgaga
    40741 gtccgccgct gcacgccaag catgagtaaa aacaaaaggt tgcatataat cgctactatc
    40801 tgcttctaat ttattacact ctgaagcaca gctaccacat aaaatacaat cccattgctt
    40861 gctaatacga tcaaattctt cttgactttg tttacagccc ttttccgctg aaaattcatt
    40921 ttttgccacc atggcaggac gaatttttct taaattttct atagaaggtt cccaatccac
    40981 aattaaatca gaaattactc taaaatttcc aagcggagaa atgcgtatac ttgaaggatt
    41041 atcatattct tttaacaaat cttgcatttt agtatcacaa gcaagataag aatgcccatt
    41101 cacacgaact gcacaagccc cacaaattgc agattgacaa gaggcggtaa aatttaaagt
    41161 aatatctttt gtttttttga taaaaagcaa aagagagagc agagtttttc cttgtatatc
    41221 cttatcatca atatcataac tttgttcata tttttccttg ccattaaaac gatctatgat
    41281 aattttcatt gtactctcct tccatcaagt gaaaactcag ttaccacgac atctttataa
    41341 ctaagtttta attcatcatt ttctaaattt acaatgctat gttttaagaa atttttatca
    41401 tctcgctttg gataatcttc tctagtatga gccccacggc tttcaagtct atttctagct
    41461 gctaaacaag cacagcgaga aagtaaaatc aaattaccaa gctctacata atctgtaaaa
    41521 gcagtattca tcacttcatt aggatttgga atacgaattt tttcatatct cgcttgtata
    41581 tcttctaatt tttttgctag aagatcgagt ttttcttgag ttctaaaaat ccccatatta
    41641 tcccaatttt gacttcctag ctcttctcgc aattcataca tttcttgacc atttccgcca
    41701 ttatttgtaa tttctttaaa tctaacctgc catttttgag caagttcatg agtttttgcc
    41761 ccttttccaa aacttgcatc tttagcataa tttgtcgcac caatgcctgc taaatgccct
    41821 gttacaactg catcggctaa agaatttccc cctagtctat tagctccatg tatagaaatg
    41881 caagaagctt ctccacctac ataaattcca gcaattttag tacccatatc ttcaaattta
    41941 gccacttcaa ttccacccat agaataatgc gccgttggac ggataggtac aggagtatct
    42001 actaaatcaa tattttcaaa aagcattgca gtgtgacgaa tttttggtaa atcttttaaa
    42061 attttttctt ttcctaagtg gcatacatcg cacaaaacat aagctccaag tccctcgcca
    42121 taacctctac cttcacgaat ttctgtttct atagcacgcg caaccacatc tcgcggtgca
    42181 agctccattt tttcatggta atttttcata aaacgctcac cacgattatt taaaagatac
    42241 cccccccctt caccgcgcgc cgcttctgta ataagagttc caccatttgc aactcctgtt
    42301 gggtgaaatt gtatcatctc aggatcttca aaaccaagtc ctgctctaag agcagctgcc
    42361 acaccatctc ctgtggcaat aaaaggagtt gaagttctat tataaaatat ccttgtgtat
    42421 ccccctgtag caatcaccaa agctttgcat aacacaggat aaattccacc gctttgtata
    42481 tctcttaaaa cgacaccctc gcattttcca tccacaacac ctatatccaa aagttcatga
    42541 ttcattaaaa atttcacacc actactaata gcatcatcta aacaagaatg cattaaaata
    42601 tgacctgttt tatctgcaga atagttacag cgtttcttag aagctcctcc cattaaacgc
    42661 tgagctactc caccttgctc atttcttgaa aacaaggttc ctataaaatc catattaaaa
    42721 atagcctttc cagctaattc gcaaaatttt aaagccgcat cttgatctac caaataagct
    42781 ccgcctttaa tagtatcata agcatgtaat ttataggaat ctccattaga aaaatcagta
    42841 actccattaa ttccaccctc tgccatacaa gttgcgttac gcgatggcat catctttgta
    42901 gctactacaa cgcttaattt tggattttct tttctcactg cggctgcagc acacaaacct
    42961 gctccacctg atccaattac caaaacatcg caagaaggta aatttatatc tttatccatc
    43021 ttagatgaat catctaaagc ataaactcca cttgaacttg cagctaaagc tcctacacta
    43081 atacaggctg tttttataaa atctcttcta gaaaattcac ccatatcatt ctccttattt
    43141 aaaaaaatta ataataattt ttaatgtaag tcaatcttac ataaccgcat gccaaaaatc
    43201 caaaaacaaa ctctcctttc aatataaaat ggattaaaaa caaatttata atttagtaaa
    43261 tataaaaaag cataa
//
LOCUS       DAPIYB010000004        36654 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.004, whole genome shotgun sequence.
ACCESSION   DAPIYB010000004 DAPIYB010000000
VERSION     DAPIYB010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 36654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36654
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.004"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..1303)
                     /locus_tag="RJ318_000154"
     CDS             complement(<1..1303)
                     /locus_tag="RJ318_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HDV7430062.1"
                     /translation="MKLKLNFLPYFSFIPKKLNTNSIIFKIIKVFFIAILLSNSIYLS
                     FFENIFTQTISPFLAIWGLVLLLKSKTSKQYFWIGFFVGILWFWWIGLSSIYFNLNYL
                     VPIIPIIIGFIYGLLFRLCYLLKFDFLRLCGIFCISFIHPLGFDWFNWGIFTVYGFFD
                     PSYRGIICIFLIAYFIYEGYISRYYKIAIVLILFFSGFQYNEKQAQTLNLNYKLINTN
                     ISQDQKFLQENLKSNSDILIQDILQAINEKKELVILPETAFAFDLKNTKYELMLKELS
                     YKITIITGAFHVEKEHTYNSTYIFKKGNVYILNKHFLVPFGEEIPFFKDLTKKYFLKN
                     IEEFSKGPIQSKYKLDNQIITNAICYEATKEQNYQNSQIIIALSNNAWFNNSSEYKLQ
                     QLLMKFYASKYGVSVYHATNGKENIVILPKKLLSKDWKNLSK"
     gene            1276..1548
                     /gene="yajC"
                     /locus_tag="RJ318_000155"
     CDS             1276..1548
                     /gene="yajC"
                     /locus_tag="RJ318_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDV7430063.1"
                     /translation="MAENSILTSLLPLVVLFAIFYFLVIRPQQKQAKAHKQMLESLQK
                     GDKIITNGGLICEVVKPEEDFIKVKLNEDNVTAKISREFIAKKIDA"
     gene            1541..3121
                     /gene="secD"
                     /locus_tag="RJ318_000156"
     CDS             1541..3121
                     /gene="secD"
                     /locus_tag="RJ318_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDV7430064.1"
                     /translation="MRNSKINYRLIIFIAVFIFGVAFSLPSFLQSERGAKINLGLDLQ
                     GGLYMLLGVDNEEAVKSKIKSIASSLSYSFNKENILNDGLNTHDDILEFTLLDNADIA
                     KVENLLKEIKGINIQSENMHYKISFTSKEVKNIENFALLQAVETIRNRLDQFGLAEPT
                     VAKQGDDKILVELAGIKTKEDELRAKERITKAAHLQLMEVDDSKMGQASTMSDAEAAS
                     YGLILVPDSRNPNLKYTLKSIPILDGSMLTDARVGLSDKSNYPVINFTLNAEGSKKFA
                     DYTGANVGKRLAIVLDNKVYSAPSINERIGGGSGQISGAFTQEEARDVAVALRSGALL
                     APVKLLEQRSIGPSLGADSIKMSMIALIGASVFIVVFMMMYYGVAGIFANIAMLVNVL
                     VVVAVMAMFGATLTLPGMAGLVLTVGMAVDANVIINERIRELLRDGVNIRVSIEQGYK
                     NAMSAIIDSNITSLVTSVALYAYGTGAVKGFAVTLGIGIVVSMITAILGTHGMFDYFM
                     QRIEKNNNTRFWFGYRRR"
     gene            3121..4092
                     /gene="secF"
                     /locus_tag="RJ318_000157"
     CDS             3121..4092
                     /gene="secF"
                     /locus_tag="RJ318_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDV7430065.1"
                     /translation="MQFFSEKKIYDFMRMRFAAISLSFILFFGSIYLLWDRGLQYGID
                     FSGGTLVQLKYENAAPITQIREILENQGTFQNLSVTEFGSNEEVTIRFLGSNDNVSND
                     IGEHISTLLKDTGKFEVRRADVVGPKVGDELRNKGLMAIAVSLIAILIYIALRFEWRF
                     ALAAIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKT
                     SKKTELAPIINESVSATLSRTVLTSGLTLATVVILYFFGGEMIQGFSLALIVGIIAGT
                     LSSIFVASPTLLWFKFSVLEFRNKEIEKAKRKQDKERNRAMYEKGTV"
     gene            4102..6531
                     /locus_tag="RJ318_000158"
     CDS             4102..6531
                     /locus_tag="RJ318_000158"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDV7430066.1"
                     /translation="MAYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSG
                     RIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYEN
                     IAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKEANVNWCEQD
                     QTVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEELLKDLEELKDKWPNQVLTM
                     QENWIGKSEGLEFSLNLDEESKQKTKESSLEVFTTRADTIYGVSYIALAPEHKIVQNL
                     LSQNLLNQDVLNKIKVIQNQSPRERQSSEKEGYFLGIYAIHPLSGEKIPLWVANFVLA
                     DYGSGAVMAVPAHDERDFEFATKYNLAIKQVIQTQENLPYMQKLGKLINSQEFDNLDC
                     NEARLKIISQFEAKNIGKRVVNFKIRDWGVSRQRYWGAPIPMIKCQSCGIVPQKLENL
                     PITLPEDVQITGEGNPLDKHPTWKNCICPKCGKEAQKESDTLDTFFESSWYFARFASD
                     EKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDR
                     LLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVE
                     GAYRFICKLYDRAQNVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFN
                     TLIAACMEALNALALCKNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKKLE
                     LKEEVFVKDTLNLAVSINGKKRAEFEISSSASKEEILAFAKENTAKWLEGKSIVKEIY
                     VEGKLVNLVIK"
     gene            6528..7040
                     /locus_tag="RJ318_000159"
     CDS             6528..7040
                     /locus_tag="RJ318_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7430067.1"
                     /translation="MKKILIFCIGLFLGACGYIPTSKIANNIFDEKVYVNVELSQQDP
                     KNSIYVADTLKEMVISKLGRKLALKHEADDVINVKMNNLEFIPLAYDKNGYVISYKAK
                     LNLDFNVVFKDGSSQAFSTSGSYNFEISPNSIISDSARYEAIRAASSEAFDEFISVIA
                     IKGQKRDSKY"
     gene            7024..8421
                     /locus_tag="RJ318_000160"
     CDS             7024..8421
                     /locus_tag="RJ318_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430068.1"
                     /translation="MIPNTNEIAKQTLIALKERKLKPTPENYTEIFEELSLKYGITSS
                     NKAKLDKYKTLLLPIYQQELNSKTIRSLEELISFLISVLNRQSGKQFSEFFDFLYTIS
                     KTLQISKDKKIRDLAKVTSIRISKTMDSESIYLLTKKWKELERNYDENDLEEQARKYG
                     ISKYEDYDSVIKKLLVKLEERSYEHFSELLCLGLNPSLVEDLKIQGFIQNLTQKPFVI
                     GEENFKNELMEFINHRIMVDNMYVQKNLNFFNDNLKKIYELLVLLNKSNEKNMDFINT
                     LKPDENGEVKLSFEDLKLKFKQLGEKITSLNNQIEFTQSLEEREAWSVLKELDKMDEN
                     FNKYKVNYSLALFSIVNYRFIMEKYGMGSLNEIFVRFKKILKDSCSEFDELWMIDEKS
                     YLIVSPGKSKDEITQLVNTNLKTIENFRFIYKQDIITPKIHVAYLDKQSKPSINILDE
                     LIKQIAAVNEQHNES"
     gene            8387..9571
                     /locus_tag="RJ318_000161"
     CDS             8387..9571
                     /locus_tag="RJ318_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDV7430069.1"
                     /translation="MQRLMNNIMKVENFLAQKSINYDKIDRFLMFRMYEKYKKYFKNI
                     PIIQLIGTNGKGSTGRYLTQLLENLNYKIGHYTSPHIFSFNERFYLDGKIANDEELEQ
                     AHIRLEEIFKQDLQKLSYFEYATFLAMILFQKCDFIVLEAGVGGEYDATSIFERRMSI
                     FTRIGFDHIQILGNSLEDIARTKLKVMAPIALISDEQEQNVLNLAKKIAFLKKANLQV
                     SSLNPFLKEKFEIYCKKFVLPYFLKHNLKLALKACEILTSQEKTLEALKKLQELNLQG
                     RCQEISPNFFVDVGHNPMAAKAMLDKFQGEKINLIYNAYLDKDIFQILNTLKPIIDTI
                     QIYKYKSAERKLADDEIYSIASKLGMQCKEFVKLEENKKNLVFGSFMLVENFLKEWCG
                     KK"
     gene            9558..10460
                     /locus_tag="RJ318_000162"
     CDS             9558..10460
                     /locus_tag="RJ318_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDV7430070.1"
                     /translation="MVKNKFTITITDINGSRHFYLNQIIKKIVFYIIAFIVLFLVFSG
                     FYIKYLDSKLSDISEKREELLKKSKELELSNSQMQKSIEEKTQQYAAIEDKIASFEEA
                     LGLEAENNLTISARLDNLQLTNEQQLGILGQIPNGWPIENKGITGNFGWREHPLLKRR
                     EFHPGIDLRAEIGTPIYAPASGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMMRKEV
                     VKAGQFVNKGQLIGYSGNTGLSTGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQE
                     RRVPWQSLIKAVSAQHPALAQKQQ"
     gene            10397..10792
                     /locus_tag="RJ318_000163"
     CDS             10397..10792
                     /locus_tag="RJ318_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HDV7430071.1"
                     /translation="MAIFNKGGISPTSSSSSETTVISSGARIEGKFYFASMLHVDGEL
                     SGIIHSESIVVIGKNGNLKGELQADKIVVNGCFEGQLEANSLEILAGGVVNGDISTQK
                     ISIENGGRFNGTSKIKEDTIKLIENNNEE"
     gene            10792..13728
                     /locus_tag="RJ318_000164"
     CDS             10792..13728
                     /locus_tag="RJ318_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDV7430072.1"
                     /translation="MQASFYEYLQNPKICELFLCKDEKQADLLAQVSRFKGLKTFVLP
                     DFRAQFGDDLRAFSKELFDLCKILNAYHKEEEKKILISPLNTVLKKLPSKKHLQNYHI
                     DKKQNFDLKCFEDEISRLGYEFVDIVQDKGEISIRADIIDIFCINEENPIRILLFGEE
                     IESIRYFDLQSQKSIPNELEHFEICPFLKYFDKENYEIFKDKLEDFQSDALIHDINSL
                     GFWCIDDFFDYLELDFLACEKFDINEYEKDISFVNAKILPQAKKFKELQSSYNKDFFE
                     FHKNKKITLLAKNEALFKALELEDTQNIHFVKSDLRLNLISPEELIISLNQKEKQKTR
                     KKASLIIDELKNGDYIVHEDYGVGKFLGLEMIVISGAKKEFVAIEYQNSDKLLLPVEN
                     LYLIDKYLGVSGSIPSLDKLGKTSFIKLKEKLKTKLLAIASEIVIMAAKRSLVQAKKI
                     TVDLNRQTDFIASAGFIYTSDQDKACHEILQDFQSGKVMDRLLSGDVGFGKTEVAMNA
                     IYPVVKSGFCAFLFAPTTLLSHQHYKTLKKRFDPFDIKVFKLDRFTSSAEKKQVLQNL
                     KENKACVVVGTHALLSVECENLALVIIDEEHKFGVKQKEKLKEITQNSHILSMSATPI
                     PRSLNQALSSIKSYSVLQTPPEDRMDVRTFVKENDDALLKEAIARELRRGGQIFYIHN
                     HIASIEQCKKHLLELFSTLRILILHSKIDAKMQEEEMLKFENKEYDLLLSTSIVESGI
                     DLPNANTIIVEKSDRFGMADLHQLRGRVGRSDKQGYCYFLIEDKNAITKDALKRLVSL
                     ESNSFLGAGSILAYHDLEIRGGGNLLGVDQSGHIEQIGYSLYLKMLEDELNALSKNEV
                     DQKENKLDLKLNVNAFLNSELISEDRLRLELYRRLSKCEQVHEVYEIEGEIEDRFGKL
                     DIYTKQFLSLITIKILALNKFKSISNYEQNIQFTALNDEKELIKAKSKDDDDILEAIL
                     THLRKA"
     gene            13730..14491
                     /locus_tag="RJ318_000165"
     CDS             13730..14491
                     /locus_tag="RJ318_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7430073.1"
                     /translation="MDWNKTYAAIYRARKDYLKPIFEIDPIALKDLVGMESQKKALYE
                     NTLNFIQDKGANHALLWGSKGTGKSSLIKAIFNEFKEQGLRLVELNKEDLFALADIID
                     EIRLENFKFILFCDDFSFEKGDDSYKFLKPLLEGSIEKAPNNVIIYASSNRRHLLSES
                     ITDNLDTQITHTELHLSDAAEERLSLSDRFGLWLSFYQGNLEEYLKMIDFYFKDYSCD
                     KELLHAKAKEFATLRASRSGRTAKQFYLAFKENFK"
     gene            14488..15174
                     /locus_tag="RJ318_000166"
     CDS             14488..15174
                     /locus_tag="RJ318_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HDV7430074.1"
                     /translation="MTGAQIFTKLLNLDLNYHDFDWLENQGLSEFELLISVVLTQNTN
                     WKNVLKALENLKKENIASLEQINTLSNLELATLIKPSGFYNTKTKRLKGLVESIINTY
                     ENLENFKTNASREWLLNIKGLGFESVDSILNYLCKREILVVDNYSLRLAFYLGYEFEN
                     YEELREFFQSDIESEQENLYKILGKKCELYELYQIFHALIVAFAKQSFKGQKLSPKGE
                     EWIKILKEDL"
     gene            15171..15983
                     /gene="thiD"
                     /locus_tag="RJ318_000167"
     CDS             15171..15983
                     /gene="thiD"
                     /locus_tag="RJ318_000167"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDV7430075.1"
                     /translation="MKAKGSELIPVLTIAGSDCSGGAGIQADLKTFSAHNLFGMSVIL
                     SVVAENTARVISVHDIPTQSVDEQMLAVFEDIVPKATKIGMIGSCELMSCVAKNLSEF
                     KPQNVVIDPVMFAKNGHALMPQENCDFFKQTIIKFADILTPNIPEAEFLCGFKIANEE
                     QMIKAAKHLCSLGTKAVLLKGGHSEANANDVLYNGKEIYILKGERIETKNTHGTGCTL
                     SSAIASNLAKGKDLFHAVSEAKEYVRNAIYYSLNLGKGCGPTNHFFKFLDEK"
     gene            15973..16605
                     /gene="thiE"
                     /locus_tag="RJ318_000168"
     CDS             15973..16605
                     /gene="thiE"
                     /locus_tag="RJ318_000168"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDV7430076.1"
                     /translation="MKNKLDLSLYLVATKGNKSEECFLNTLENAIKGGVSIIQLREKE
                     LNAREFYKLGLKVQKLCKSYKIPFLINDRVDIALALDADGVHLGQEDLEAKLARKLLG
                     DEKIIGLSLKKLEQLEFIQGVNYLGCGAIKATPTKESSLLSLELLSQICDKSPIGVVA
                     IGGIDKEALVELKGINLSGVAVVRAIMDAKDAFLAAKELKRKIYENLSLK"
     gene            16583..17212
                     /locus_tag="RJ318_000169"
     CDS             16583..17212
                     /locus_tag="RJ318_000169"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDV7430077.1"
                     /translation="MKIYLLNETPFEGVENLILNEIVFYDFSVDLSLYDALICTSKNA
                     LKALQHAKITLNFKLNLYAVGQSTAQYAKNLGFKKIKIPSKAYGKDLFLEFKEELKMQ
                     KCLYLRAKNIVSTLNLDLKNVGVDLDEMIVYENVFKKGDKKLIHPAIFIFTSPSSVEN
                     FLKFYSLKEEDKVVVIGQSTAKKLLNFKNLYICENQSLLNCVKLAKTLV"
     gene            complement(17209..17661)
                     /locus_tag="RJ318_000170"
     CDS             complement(17209..17661)
                     /locus_tag="RJ318_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430078.1"
                     /translation="MKKAYVLIWTIFLILLISLWMSLTLNISSYTPKIIQDSYYYLQA
                     QILSHNATQFSKYFLYQAKQENKECLDNIYFNYTKALIKIKYFYPIAQCVNFKFSNFN
                     PDANLSKDGVIIAHISIALNRDKNVNDEILLTKSIIIYPKENFWNLKN"
     gene            complement(17658..18320)
                     /locus_tag="RJ318_000171"
     CDS             complement(17658..18320)
                     /locus_tag="RJ318_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430079.1"
                     /translation="MSKAFTLFELIISLILFTFITSLLSKPLMDFYHLNFTALHTNNL
                     ITQAHLNLLKIEKLIQNCINITFSQNTLKCLLKDELISLKDNKLYLINSALILENNHT
                     LYSPHSDFKTQLQNRKDLYNDNEHISYAYKINKIEKISILENGISANFTGSFIPLQAQ
                     LVIKLQNEELIYEIKPKFNEQLNQQGLISKNISSFNLQNNKLKICLKRQTKHCLEKRI
                     LL"
     gene            complement(18317..18619)
                     /locus_tag="RJ318_000172"
     CDS             complement(18317..18619)
                     /locus_tag="RJ318_000172"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HDV7430080.1"
                     /translation="MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERL
                     YKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDGIFQFQKLYFQDQNYSVYFKE"
     gene            complement(18616..19347)
                     /locus_tag="RJ318_000173"
     CDS             complement(18616..19347)
                     /locus_tag="RJ318_000173"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDV7430081.1"
                     /translation="MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKT
                     LLYKDFNIEGKDVILAFKPYALENIAQMLKGQARILISVLANVDFEKLQTIKAQNYVR
                     IIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
                     FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSNALLEHEHPAIIKENICSPGGVTI
                     KGIKILEQKGIRGSFFEAINASSAK"
     gene            complement(19347..19736)
                     /gene="fliW"
                     /locus_tag="RJ318_000174"
     CDS             complement(19347..19736)
                     /gene="fliW"
                     /locus_tag="RJ318_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HDV7430082.1"
                     /translation="MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLIN
                     PYLIRPDYEFDIPTYYQELLSLTPESNMKIFNIVAIAKSIEESTVNFLAPVVINLDNN
                     TMVQVILDTVNYPDFFQADQIANYIKK"
     gene            19897..20544
                     /locus_tag="RJ318_000175"
     CDS             19897..20544
                     /locus_tag="RJ318_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDV7430083.1"
                     /translation="MKKGIFLLVFLSVFFSACSTKNDEGLYNLSASEWYKQIIKDLQD
                     KDLEKADDHYNGMASEHVADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSR
                     NADYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTKFN
                     LAVFYLNSTIENLYQRIGHDESAQIYKQRLQESEFYQQSIIKPELPWYRSIFERF"
     gene            20561..22936
                     /gene="lon"
                     /locus_tag="RJ318_000176"
     CDS             20561..22936
                     /gene="lon"
                     /locus_tag="RJ318_000176"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDV7430084.1"
                     /translation="MQIEEIQNYPANLPVLVEDELFLYPFMITPIFINDSSNMKALDL
                     AIKNDSMLFVAPSKLENGRNFDEIYNCGVIGTIMRKVPLPDGRVKILFQGYAKGKIIE
                     QISNKPLEAKIELIKEDFLEGTKKEALLEVLKEKVKNLANISHYFSPDLLRTIEEGFD
                     ASRICDLILNTVRIKKQVAYEFFVLTDLEQKLVKLIDLIAQEIEANKIQKEIKNKVHS
                     RIDKVNKEYFLKEQLRQIQKELGSDTQKEDEVREYQKRLELKKKFMHEDAYKEIKKQI
                     EKFERIHQDNSEASMIQTYIETALDIPFEKISKKKLDIKEVSKQLNHDHYALNKPKER
                     IEEYFAVRELLEKRKIAEKDGAKVILCLYGPPGVGKTSLANSVSKALKRELIRIALGG
                     LEDVNELRGHRRTYIGAMPGRITQGLIEAKQINPVIVLDEIDKLNRSFRGDPSAVLLE
                     ILDPEQNSKFRDYYLNFNIDLSKVIFIATANDISNIPAPLRDRMEFIELSSYTPSEKF
                     HIMKKYLIPDELKKHGLKSNELSIDDETIELIISDYTRESGVRNLRRKVAELCRKSAK
                     KLLLENIKKVIINTKNLNEFLDKKVFEIEKNNGENQVGQVNGLAWTSVGGDVLKVEAV
                     KIKGKGELTLTGSLGDVMKESARIAFSMIKVLIDEGKIKIPKKIIIDPKVNVYDSYNI
                     HIHVPDGATPKDGPSAGITISTAIASIFSDKKVKADVAMTGEIDLKGKVLPIGGLKEK
                     LIAAYKADIKTALIPRKNYERDLKDIPSEVRDNMEIIAVDTFSDVLEYTLV"
     gene            complement(22997..23257)
                     /gene="rpsR"
                     /locus_tag="RJ318_000177"
     CDS             complement(22997..23257)
                     /gene="rpsR"
                     /locus_tag="RJ318_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDV7430085.1"
                     /translation="MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRR
                     LTGTSKKYQEMVEVAIKRARHVALIPYIVDRKEVINNPFEGL"
     gene            complement(23268..23819)
                     /locus_tag="RJ318_000178"
     CDS             complement(23268..23819)
                     /locus_tag="RJ318_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDV7430086.1"
                     /translation="MFNKVVLVGNLTRDIEMRYAQSGSAIGASAIAVTRRFTANGEKR
                     EETCFIDISFYGRTAEVANQYLTKGSKVLIEGRLRFEQWSDQNGQNRSKHSIQVENME
                     MLGNSNAPQQGGNFGNNSFSNNNYSGNYENQSYDPYMSENQNFNKAKANPAPQRNQSP
                     QHEEKLKEIDIDAYDSDDTNLPF"
     gene            complement(23828..24205)
                     /locus_tag="RJ318_000179"
     CDS             complement(23828..24205)
                     /locus_tag="RJ318_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDV7430087.1"
                     /translation="MKHYEVLFILKPTLTEEEVNTKLEFVKEVLTKNSAEIETVVPMG
                     TRKLAYKIKKYERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAW
                     EKLSHGIKQSKKEIKPLDAPEIQ"
     gene            complement(24292..25158)
                     /locus_tag="RJ318_000180"
     CDS             complement(24292..25158)
                     /locus_tag="RJ318_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK family antimicrobial peptide resistance
                     protein"
                     /protein_id="HDV7430088.1"
                     /translation="MNKKFSYPIPNFTDRRKSIIFWRYLRFQARKILYFPQVRLLEKT
                     LNKEKNKHLKDFFSQRPYACYNATRRFCDKSFKANERVKTLIYDVDKGLACFKFLPEE
                     QIIFSFDEDFELFLGYNYNVCEEGFWAFSLKFKKYTILQCNFCFTLENNLLLSCIQGH
                     KYKDFNILEINKILTKKCHGLRPVALLIECSKMLCEILKLQATLGVHEKNQIRSQKGK
                     EKGYFVDYQKIWLENGGELIKINKHKYYKLHHSQKNLEEIPSQKRSMYKKRFAMLEEI
                     KTNLDKTLSIQD"
     gene            complement(25151..26257)
                     /gene="rseP"
                     /locus_tag="RJ318_000181"
     CDS             complement(25151..26257)
                     /gene="rseP"
                     /locus_tag="RJ318_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDV7430089.1"
                     /translation="MRSLLFLIVILILGIKFYSIEFLATVLVISFLIFFHELGHFLAA
                     RSLGVKVEVFSIGFGKSLIEREFKGTNYRLSTLPLGGYVKLKGQDDMRPGFENLDKDS
                     YSILSPLKKIYILFAGPFFNLILAFFLYIIIGNLGLNKLAPQIGNIAPNSAAQEIGLQ
                     KNDTILEINGIRIQTFDEISKHLSLDPLKILINREGKNLEFILTPKIGQGYNDFGQIV
                     EKPQLGVSPNGTSTLVKHQGLESFKYAAQESFQASTLIIKGIVKLISGEVEAKNLGGI
                     ITMTEITSKAAQNSFTLLLFITALISINLGILNLLPIPMLDGGHILFNLYEMIFRRKV
                     PQRTFEYLSYTGMAILLSLMLFATYNDISRIIGE"
     gene            complement(26254..26790)
                     /gene="pgsA"
                     /locus_tag="RJ318_000182"
     CDS             complement(26254..26790)
                     /gene="pgsA"
                     /locus_tag="RJ318_000182"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDV7430090.1"
                     /translation="MNLPNILAIFRMVLAPLLFFLLIHHFENIHQSWINYFAALTFSL
                     AALSDFFDGYIARTWKQTTKLGGILDPLADKMLVLAAFLGLLLTGKANEWVIYIILVR
                     EFFITGFRVVMISENLNVNASFAGKLKTAFQMTAIGFLIMEWIGGEILLYIALILTLY
                     SGFEYIYTYIKAQKKGEK"
     gene            complement(26915..27520)
                     /locus_tag="RJ318_000183"
     CDS             complement(26915..27520)
                     /locus_tag="RJ318_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDV7430091.1"
                     /translation="MKKELEIFSTRYSCRNFKNEKLKKEDLNSILEIARLSPSSLGLE
                     PWKFIVVQDEKRKEELSKICNQQKHVKDCAALIIIISRLDFLDYFEEKLRKRDMSETE
                     MQKRLDTYMPFLKSLNQEQKISYAREQAHIALASILYSANALNIASCTIGGFDKEKLD
                     SYLSLDIQKERSSLVVALGYCNDKKNPQKNRFSFDEVVKFI"
     gene            complement(27520..28140)
                     /locus_tag="RJ318_000184"
     CDS             complement(27520..28140)
                     /locus_tag="RJ318_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDV7430092.1"
                     /translation="MNFKELISKRRACKLFNDKKINEKDLHFILESGVLAPSSHGFEP
                     WKFVVLEQKEHNLKLSTLCYNQQNVASASHNIIFLARKDLQSKDEFAQKQVRRFSGSS
                     EENFQKILEIYTHKTNAMNDNELYHYAQLQCYLAMMQMSLAAMSLGIDSCMIGGFEKA
                     KVDNFLNLTYPFETAVILSLGYKAHEPKYSTQRLNFNEVVEFYKEK"
     gene            complement(28204..28629)
                     /locus_tag="RJ318_000185"
     CDS             complement(28204..28629)
                     /locus_tag="RJ318_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7430093.1"
                     /translation="MKEIKLKEDLEKIYPLIKQLRNNLSLKDFLDKIQLATQTQHYKL
                     FAYENEGSYKAACGVMPFNVLYHNHCLYICDFVVDEALRGKGIGQAFLKKIQIWAKDQ
                     GYEELELSSSFFRTQAHEFYIQKMGFEKSGFVFKKNIKL"
     gene            complement(28641..29729)
                     /locus_tag="RJ318_000186"
     CDS             complement(28641..29729)
                     /locus_tag="RJ318_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HDV7430094.1"
                     /translation="MKHLLYLIGDELTINEKFKNYIYRTYEEKFKEINEIRIQSKTDK
                     DLPFLLENLLNQYDFITLFTSPLHYATVAKILATLNDDNLILKDDTLVPDKAEFSKNS
                     FVCNFSNSKINVVKINPSEKLPNLLGHIKLNFAYFCIFGMDDESAILLLQTLTKSYEI
                     NIKLTKLLDNLVLIKATCANFGKLDGFLNSVKNLFGQKVFLGKDPIHFISSKLLEKKL
                     KISFAESCTGGLCASTLTKISGVSEIFEGSIVSYSNRIKHEWLGISESILENNGEYSE
                     RCVYFMLKGIFKTANPDFALAISGVVGEKDEGKIKSGTIYIGAMFRDGTFIQETLYLD
                     GDREFMQEQAVLATFCLLLKLKPEIFEI"
     gene            29828..32581
                     /gene="ileS"
                     /locus_tag="RJ318_000187"
     CDS             29828..32581
                     /gene="ileS"
                     /locus_tag="RJ318_000187"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDV7430095.1"
                     /translation="MDYKETLLLPSTTFAMRANLAELEPQRFKKWFEQNYAYETMKEN
                     RKNAKKSFTLHDGPPYANGHIHIGHALNKILKETIIKTHYFKGESVRFTPGWDCHGLP
                     IEQQVEVKLGEKKKSLSKKEIREFCRQHASEFVDIQREEFKNLGIIADWDKPYLTMKF
                     EFEAAIYRTLCEIAKKGLLCERSKPVFWSWAAKSALAEAEVEYQDKEDYSIFVAFDLD
                     VKACEKLGVSKASAVIWTTTPWTLVANQAIALNPNENYVITKEGLIFASALLKSMVEK
                     GLTSGEIQKELNAKEFEKLEAINPLNGRKSVLIMGEHVLMDGGSGLVHTAPGHGEDDY
                     YACLKYGIEVLMPVDDGGCYDETLRAKELLPSHLLEEFIGLHIFKANEKILELLGAKL
                     LHSSKFIHSYPFCWRTHKPVIYRATKQWFILMDEPKLQGKTLRECAKEQLLKTTFYPQ
                     SGVKRIGSMVENRPDWCISRQRDWGTPIAFFRDKNTKEVIFDDELFDFVAAIFEKHGA
                     DAWWEFEIKDLIPTNSKYNAENLEKVYDILDVWFDSGSTFNAVLNSGLYDAGEKRASM
                     YLEGSDQHRGWFQSSLLVGTAINESAPYESILTHGFTTDEKGQKMSKSKGNVIAPEYV
                     AKTYGVEILRLWILLSDYSSDLKISDNILKQVGEQYRKIRNTIRFLLANTNDLKDLKV
                     KEFSFIDKWILSRATKVFKASKEAFFAYEFAKGFSLLLNFLSADLSGIYLDISKDRLY
                     CDSENAQRRKSAQVAMALIAKELLNLLAPNLSYSVDEALEHANVLIKGDAKDVFDLSL
                     TQDFDYDFGIDDTFLMSAREKFFEQIDILKKDKIIKSTLELNLNISFNKFPNEELADW
                     FMVSQISNENEEILAEFEVENEKFKITKASLCKCPRCWKLQSKDEETPCLRCEEVLKG
                     IQC"
     gene            32575..32685
                     /locus_tag="RJ318_000188"
     CDS             32575..32685
                     /locus_tag="RJ318_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430096.1"
                     /translation="MLENPIPNSIIITTIAVVLAFSALAVFLIKKTKENK"
     gene            32682..34043
                     /gene="gatA"
                     /locus_tag="RJ318_000189"
     CDS             32682..34043
                     /gene="gatA"
                     /locus_tag="RJ318_000189"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HDV7430097.1"
                     /translation="MITLKEALKYSKEELENLKKELNEKAKKEKKIGAYIEQFLDKDL
                     SVSGEGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMD
                     EFAMGSSTASSYYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPA
                     AFCGCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSA
                     NIEFIKTAPNLNANKKLKIAVIENYVNDADSEVKNALLKTIDMLKANGHEIVYKNLLD
                     SKFDIAAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFREEVKRRI
                     LLGTFVLSSGYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDTQKSP
                     MQTYLEDVYTISVNLAGLGGISVPVAKDKEGLNISAQLICKAYDEQTLLDGALSLEQM
                     IKH"
     gene            34053..35510
                     /gene="guaB"
                     /locus_tag="RJ318_000190"
     CDS             34053..35510
                     /gene="guaB"
                     /locus_tag="RJ318_000190"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDV7430098.1"
                     /translation="MKIVKRALTFEDVLLRPGYSEVLPKEVKIHTKLTKNITLNMPLI
                     SAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSESGVIIDPIFVSPK
                     ASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLRFESDFSNLVENVMTKMPLITA
                     PKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKKRKEYPDANKDNFGRLRV
                     GAAIGVGQMDRVNALVEAGVDVVVLDSAHGHSKGIIDTVKAIKAKYPNLDLIAGNIAT
                     AAAAKALCEAGVDAVKVGIGPGSICTTRIVSGVGVPQISAIDECVEEANKFGVPVIAD
                     GGIKYSGDIAKALAVGASSVMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSLGAMQK
                     GSSDRYFQQGTAQDKLVPEGIEGRVPYVGSIRSVVHQLLGGLRSSMGYVGAKDIEDFQ
                     KRAEFVEITTAGLKESHVHDVTITHEAPNYKVNHQ"
     gene            35507..35680
                     /gene="xseB"
                     /locus_tag="RJ318_000191"
     CDS             35507..35680
                     /gene="xseB"
                     /locus_tag="RJ318_000191"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDV7430099.1"
                     /translation="MSFEENLKHANESLEKLNNQELALDESVKIYKEGLESIKKARLE
                     LEKAKLEVEQIDE"
     gene            35673..36449
                     /locus_tag="RJ318_000192"
     CDS             35673..36449
                     /locus_tag="RJ318_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HDV7430100.1"
                     /translation="MSKIAALQFPTLALSESRLDYYLKASKDNGVNLVVLGEYVINSF
                     FTELLHMPKNMIKEQSEAKKESLIKLAKKYELEIIAPYVSVEAKSYKKLCLKVTPNGV
                     KSYEQQILMPYEHWNEEKFFSNKTPSELKIFTFNYEKLKCALLFGFETHFDIFWQQIM
                     AKKIDLVIVPSACTFESKQRWEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTLFI
                     NAFGEIESKLGSEEEMLIIEPKKSDEARKLWGFDKILKNF"
     gene            36461..>36654
                     /locus_tag="RJ318_000193"
     CDS             36461..>36654
                     /locus_tag="RJ318_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430101.1"
                     /translation="MRKILLQIFIFSVLFIVTFTINRILMQNSFIPTGLISDKNEIFL
                     MYLLGVFHDIRFLSVAFLPF"
BASE COUNT        13136 a         4581 c         6453 g        12484 t
ORIGIN      
        1 ctttggataa atttttccaa tctttgctta aaagcttttt agggagtata actatattct
       61 ctttgccatt tgtagcatga taaacactaa ccccatattt acttgcataa aatttcatta
      121 agagttgctg gagtttgtat tcgctactat tattaaacca agcattgttg cttagggcta
      181 taataatttg tgaattttga tagttttgtt ctttggtagc ttcataacaa attgcatttg
      241 tgataatttg attatctaat ttatatttgc tttgtatagg acctttggaa aattcttcaa
      301 tatttttgag aaaatatttt tttgttaagt ctttaaaaaa tggaatttct tcaccaaagg
      361 gaactaaaaa atgcttattt aaaatataga cattgccttt tttaaagata taagtgctat
      421 tgtaagtatg ctctttttca acatgaaatg ctcctgtaat aatggtgatt ttataagata
      481 attctttaag cataagctca tatttggtat tttttaaatc aaaagcaaaa gcggtttcag
      541 gcaagattac aagttctttt ttttcattta tagcttgaag tatatcttga attaagatat
      601 cagaatttga ttttaaattt tcttgtaaaa atttttgatc ttgagagata ttagtattga
      661 tgagtttgta gtttaaatta agagtttgag cttgtttttc attatattga aatccactaa
      721 agaataaaat aagaacaatt gctattttat aatatcttga tatataaccc tcatagatga
      781 aatatgctat taaaaatatg caaataatgc cacgataact tgggtcaaaa aaaccataaa
      841 ctgtaaaaat cccccaatta aaccaatcaa atcctaaagg atggataaaa cttatgcaaa
      901 aaattccaca aagccttaaa aaatcaaatt ttaataaata acataatcta aaaagtaacc
      961 cataaataaa accaatgata attggtataa ttggtactaa atagtttaga ttaaaataaa
     1021 ttgaagataa accaatccac caaaaccaaa gaatccctac aaaaaaacct atccaaaaat
     1081 attgtttaga agttttactt tttagaagta aaactaaccc ccaaatagct aaaaatggac
     1141 taatggtttg tgtaaaaata ttttcaaaaa atgatagata aatagaattt gaaagtaaaa
     1201 ttgcaataaa aaagactttt attattttaa aaatgataga attagtgttt aatttttttg
     1261 gaataaagga aaaatatggc agaaaattca attttaactt cattgttacc tcttgtagtg
     1321 ttatttgcaa ttttttattt cttggtgatc agaccgcaac aaaaacaagc aaaagcacat
     1381 aaacaaatgc ttgagtcttt gcaaaaagga gataaaatca tcactaatgg cggacttatt
     1441 tgtgaagtcg taaaaccaga ggaggatttt atcaaagtta agcttaatga agacaatgtt
     1501 actgcaaaaa tttcaagaga atttatagca aagaaaattg atgcgtaatt ctaaaatcaa
     1561 ttatcgcttg attattttta tagcggtatt tatttttgga gtggcttttt cactcccttc
     1621 ttttttgcag tcagaacgtg gtgcgaagat taatttaggg cttgatttgc aaggtgggct
     1681 ttatatgctc ttaggtgtag ataatgaaga agctgtaaaa tctaaaataa aatcaattgc
     1741 atcttcattg agttattctt ttaataaaga aaatatttta aatgatggct taaataccca
     1801 tgatgatatt ttagaattta ctttgcttga taatgcagat attgcaaaag ttgaaaattt
     1861 gcttaaagaa ataaaaggaa ttaatataca aagtgaaaat atgcactata aaatttcttt
     1921 tacctcaaaa gaagtaaaaa atatagaaaa ttttgcactt ttgcaagcag ttgaaaccat
     1981 aagaaatagg cttgatcaat ttggtttagc agagccaaca gttgctaaac aaggtgatga
     2041 taagattttg gttgaacttg cagggattaa aaccaaagaa gatgaactaa gagcaaaaga
     2101 acgcatcaca aaagcagcac atttgcaact tatggaagtt gatgattcta aaatgggtca
     2161 agcttctaca atgagcgatg ctgaggctgc gagttatgga ctgattttag tgcctgattc
     2221 tagaaatcca aatttaaaat ataccttaaa aagtatacct attttagatg gatctatgct
     2281 tactgatgct agagtaggac ttagcgataa gagtaattat cctgtgatta attttacttt
     2341 aaatgccgag ggttctaaaa aatttgctga ttatacagga gcaaatgttg gaaagcgtct
     2401 tgctattgta cttgataata aagtatattc tgctccatct atcaatgaac gcataggcgg
     2461 aggtagtggg caaatcagtg gagcttttac tcaagaagaa gcacgcgatg tggcggtagc
     2521 tttaagaagt ggagctttgc ttgcgcctgt aaaattactt gaacaaagaa gcataggacc
     2581 atctttaggt gctgatagta ttaaaatgag tatgatagcc ttaatcggtg catcagtttt
     2641 tattgtagta tttatgatga tgtattacgg tgtggcagga atttttgcaa atattgcaat
     2701 gctagttaat gttttggtag tagttgccgt tatggctatg tttggagcaa ctttaacttt
     2761 accagggatg gcaggacttg ttttaactgt gggtatggca gtagatgcaa atgtgattat
     2821 caatgagcgt atacgagaac tcttgcgaga tggagtaaat ataagagtta gtatagaaca
     2881 aggttataaa aatgctatga gtgcgattat agattcaaat atcacttctt tagttacttc
     2941 ggtagcgctt tatgcctatg gaacaggagc agttaaaggt tttgctgtga ctttgggaat
     3001 tggtatcgtt gtttctatga ttacagctat tttaggaact catggaatgt ttgattattt
     3061 tatgcaacgc atagaaaaaa ataataatac aagattttgg tttggttata ggagaagata
     3121 atgcagtttt ttagcgaaaa gaaaatttat gattttatga gaatgcgttt tgctgctatt
     3181 tccctttctt ttattttgtt ttttggttct atttatttac tttgggatag gggtttgcaa
     3241 tatggcattg attttagcgg aggaacttta gttcagctta aatatgaaaa tgcagctcct
     3301 ataacgcaaa ttcgagaaat tttggaaaat caaggaactt ttcaaaattt atctgtaact
     3361 gagtttggaa gcaatgaaga agtaactata cgctttttag gaagtaatga taatgtaagc
     3421 aatgatatag gtgagcatat aagcactctt ttaaaggata cgggaaaatt tgaagtgcgt
     3481 cgtgctgatg tggtaggtcc aaaagtaggt gatgaactta gaaataaagg acttatggct
     3541 atagctgtat ctttgatagc aattttaatt tatatagcgt tgcgttttga gtggcgtttt
     3601 gctcttgcgg ctataatcag tgaaattcat gatgttgtga ttactttagg agcaatttct
     3661 ttatttaaaa ttgatgtcaa tctagatact ttggctgctg ttttaactgt gcttggatac
     3721 tctttgaatg atacaattat tatttttgat agaatcagag aaggtattaa aacaagtaaa
     3781 aaaaccgaac ttgcacctat tattaatgaa agtgtttcag caactttatc aagaacggtt
     3841 ttaacttcag ggttgacttt agcaaccgtt gtgatacttt atttctttgg cggggaaatg
     3901 atacaaggat tttctttggc tttaattgta ggtattatag cgggaacttt aagctctatt
     3961 tttgttgcaa gtccgacatt attatggttt aaatttagtg tgcttgagtt tagaaataaa
     4021 gaaattgaaa aagcaaaaag aaaacaagat aaagaacgca atcgtgcaat gtatgaaaaa
     4081 ggaactgtgt aaggagaatt tatggcttat gaagcaagtt taatagaaaa aaaatggcaa
     4141 aaaatttggg atgaaaatga atattttgag ccaaaagatg acttaaattt gcctaaaaaa
     4201 tatattttat cgatgtttcc ttatcctagc ggacgcattc acatggggca tgtaagaaat
     4261 tatactatag gtgatgcttt agcaagatat tatcgcaaga taggttttaa tgttttacat
     4321 cctataggtt ttgatagttt tggcatgcct gctgaaaatg cagctattaa acataaaatt
     4381 catcctaagt catggactta tgaaaatata gcttatatga aaaaagaact tttttcttta
     4441 ggtttttctt tttctaaaaa aagaatgctt gctacttcag atccacttta tacaaaattt
     4501 gagcaagaat tttttattaa gatgtttgaa aaaggtttga tttacactaa agaagcaaat
     4561 gtaaattggt gtgaacaaga tcaaacggtt ttggctaatg agcaagttga agacggaaaa
     4621 tgttggcgtt gtggtcatga agtggtgcag aaaaaaatgc caggttatta tgtaaaaatc
     4681 actgcttatg ctgaggaact tttaaaagat ttagaagaat taaaagataa atggcctaat
     4741 caagttttaa ctatgcaaga aaattggatt ggtaaaagcg aaggtttgga attttcttta
     4801 aatttagacg aagaaagtaa gcaaaaaacc aaagaaagtt ctttagaagt ttttactaca
     4861 agagcagata caatttatgg agtttcgtat atcgctttag ctccagaaca taagattgtt
     4921 caaaatttgc tttcacaaaa tttattaaat caagatgtat taaataaaat caaagttatt
     4981 caaaatcaaa gcccaagaga aagacaaagt tctgaaaaag aaggttattt tttaggaatt
     5041 tatgccattc atcctttaag cggagaaaaa attcctttat gggtggctaa ttttgtcttg
     5101 gctgattatg gtagtggagc ggttatggct gttccagctc atgatgaaag agattttgaa
     5161 tttgcaacaa aatataatct tgccatcaaa caagttattc aaactcaaga aaatttacct
     5221 tatatgcaaa aattaggaaa attaattaat agtcaagaat ttgataatct tgattgtaat
     5281 gaagcaagat taaaaatcat ttctcagttt gaagctaaaa atataggaaa aagggttgta
     5341 aattttaaaa ttcgtgattg gggtgtttcg cgtcaaagat attggggtgc gcctattcct
     5401 atgattaaat gtcaaagttg tggtatagta cctcaaaaac tagaaaattt acctattact
     5461 ctgcccgaag atgtgcaaat tacaggtgag ggtaatccac ttgataaaca tccaacttgg
     5521 aaaaattgta tctgtccaaa atgtggtaaa gaggctcaaa aagaaagcga tactttagat
     5581 actttttttg aaagttcttg gtattttgca cgttttgcaa gtgatgagaa aacttggcag
     5641 gaaaaagctt tagatgaaaa aagtgtaaag tattggatga gtgtggatca atatataggt
     5701 ggtattgaac atgcaatctt gcatttactt tatgcgagat ttttccaaaa agctttaaga
     5761 gatttgggtt atttaacaca aaatgaacct tttgatagac ttttaactca gggtatggtg
     5821 ttaaaagatg gtgctaaaat gtcaaaatca aaaggcaatg ttgtagatcc tgatgagatt
     5881 atagaaaaat acggtgctga taccgcaaga ctttttatac tttttgctgc gcctccggct
     5941 aaagagcttg aatggaatga tgatgcggtt gaaggggctt atagatttat ttgcaaactc
     6001 tatgataggg cgcaaaatgt taaaaaaggt gagcttgtag aattaaaaca agaaaattta
     6061 aacaaagaag aaaaatatgc aagattaaag gtatatgaag ctttgaaaaa atcttttgaa
     6121 gtttatcatc aaagttttgc ttttaatact ttaattgcag cttgtatgga agctttaaat
     6181 gctttagcac tttgtaaaaa tgaagctttg gagcaagagg ctttttatat tattttaaat
     6241 attttagagc ctattattcc tcatgtttgt tttgagctta gtgaggagct ttttaaatgt
     6301 aaaaatttca aaaaattaga acttaaagaa gaggtttttg taaaagatac tttaaattta
     6361 gctgtaagta ttaatggtaa aaaaagggct gaatttgaaa tttcaagtag tgcgagcaaa
     6421 gaagaaattt tagcttttgc aaaagaaaat actgctaaat ggcttgaagg taagagtata
     6481 gttaaagaaa tttatgtgga aggaaagcta gttaatctag tgattaaatg aaaaagattt
     6541 taattttttg tataggttta tttttaggtg cttgtggata tattcctaca tcaaaaatcg
     6601 ctaataatat tttcgatgag aaggtttatg ttaatgttga attaagtcaa caagacccaa
     6661 aaaatagtat ctatgttgcc gatactttaa aagaaatggt aatttcaaaa ttagggcgta
     6721 aacttgcttt aaaacacgag gcagatgatg taattaatgt taaaatgaat aatttagaat
     6781 ttattccttt agcttatgat aaaaatggct atgttattag ttataaagct aaattaaatt
     6841 tagattttaa tgttgtcttt aaagatggtt caagtcaggc ttttagtaca agtggaagtt
     6901 ataattttga aatttctcca aatagtatta ttagtgattc tgcaaggtat gaggctattc
     6961 gagcagcttc aagcgaggca tttgatgagt ttatttccgt aattgctatt aaagggcaaa
     7021 aacgtgattc caaatactaa tgaaatagca aagcaaactt taattgcatt aaaagaaaga
     7081 aaactaaaac caactcctga aaattatacg gaaatttttg aagaattatc tttaaaatat
     7141 ggtatcacaa gctcaaataa agctaaactt gacaaataca aaaccttgct tttgccgatt
     7201 tatcaacaag aattaaattc taaaactata agaagtttag aagaactaat tagtttttta
     7261 atttctgttt taaatagaca aagcggaaaa caatttagtg aattttttga ttttttatat
     7321 accatatcta aaactttgca aataagtaag gataaaaaga taagagattt ggctaaggtg
     7381 acttcgatta gaatttctaa aactatggat agtgaaagta tttacttgct tactaaaaaa
     7441 tggaaagagc ttgaaagaaa ttatgatgaa aatgacttag aagaacaagc tcgtaaatat
     7501 ggcattagta aatatgaaga ttatgatagc gtgattaaaa aactcttagt caagcttgaa
     7561 gagcgtagtt atgagcactt tagtgaatta ttatgcttgg gtttaaatcc ttcattggta
     7621 gaagatttaa aaattcaagg ttttatacaa aatttaacac aaaagccttt tgtaataggc
     7681 gaagaaaatt ttaaaaatga actaatggaa tttataaatc atcgcataat ggttgataat
     7741 atgtatgtcc aaaaaaattt aaattttttt aacgataatc taaaaaaaat ctatgaattg
     7801 cttgtcttac ttaataaatc gaatgaaaaa aatatggatt ttatcaatac cttaaaacca
     7861 gatgaaaatg gggaagtaaa acttagtttt gaggatttaa aactaaaatt taaacaactt
     7921 ggagaaaaaa ttacatcttt aaataatcaa attgaattca cgcaaagctt agaagagaga
     7981 gaggcttgga gtgttcttaa agagcttgat aaaatggatg aaaattttaa taagtataaa
     8041 gttaattatt ctttagcttt attttctata gtaaattacc gtttcattat ggaaaaatat
     8101 ggtatgggaa gtttgaatga aatttttgtt cgatttaaaa aaattttaaa agattcttgt
     8161 agtgaatttg atgaactgtg gatgatagat gaaaagagtt atttgattgt ttcgccagga
     8221 aaaagcaaag atgaaattac acagcttgta aatacaaatc ttaaaactat agaaaatttt
     8281 agatttattt ataagcaaga tattataact cctaaaattc acgtggctta tcttgataag
     8341 caaagtaagc caagtattaa tattttagat gagttaataa agcaaattgc agcggttaat
     8401 gaacaacata atgaaagttg agaatttttt agctcaaaaa agtataaatt acgataaaat
     8461 tgatcgtttt ttgatgttta gaatgtatga aaaatataag aaatatttta aaaatattcc
     8521 tataatccaa cttataggca caaatggtaa aggtagcacg ggtagatatt taacccaact
     8581 tttagaaaat ttaaattata aaatagggca ttatactagc ccgcacattt tcagttttaa
     8641 tgaaagattt tatcttgatg gtaagattgc gaatgatgaa gaattagaac aagctcatat
     8701 aagacttgaa gaaattttta aacaagactt gcaaaaatta agttatttcg aatatgctac
     8761 ttttttagct atgattttat ttcaaaaatg cgatttcatt gttttagaag caggagtggg
     8821 tggagaatat gatgctactt ctatttttga aagaagaatg agtattttta caagaattgg
     8881 atttgaccat attcaaattt tgggcaattc tttagaagat attgcaagaa ccaagcttaa
     8941 agttatggca cctatagcac ttataagtga tgagcaagag caaaatgttt taaatttagc
     9001 aaaaaaaatt gcttttttaa aaaaagctaa tttgcaagtt tcctccttaa atcctttttt
     9061 gaaagaaaaa tttgagattt attgtaaaaa gtttgtttta ccttattttt taaagcataa
     9121 tttaaagctt gcattaaagg cttgtgaaat tttaacttcg caagaaaaaa ccttagaagc
     9181 tttaaaaaag ttacaagagt taaatttaca aggaagatgc caagaaattt ctccaaattt
     9241 ttttgttgat gtgggtcata atcccatggc tgctaaggcc atgcttgata aatttcaagg
     9301 agaaaaaata aatcttattt ataatgctta tttggataag gatatttttc aaattttaaa
     9361 tacattaaag cctattattg atacaataca aatatataaa tataaaagtg cagaacgaaa
     9421 gctggccgat gatgaaattt atagtattgc atcaaagcta ggcatgcaat gtaaagaatt
     9481 tgtaaaatta gaagagaata aaaaaaatct agtttttggt tcttttatgc tggtagaaaa
     9541 ttttttaaag gagtggtgtg gtaaaaaata aattcactat taccattaca gatattaacg
     9601 gttcaagaca tttttattta aatcaaataa tcaaaaaaat agttttttat attattgctt
     9661 ttattgtttt atttttagtt tttagtggtt tttatatcaa atatctcgat agcaaactta
     9721 gtgatatcag tgaaaagcgt gaggagcttt tgaaaaaaag caaagaattg gaattatcta
     9781 attcgcaaat gcaaaaaagc atagaagaaa aaactcagca gtatgcagct atagaagata
     9841 aaatagcttc ttttgaagag gctttgggct tagaagcaga aaataatctt acaattagtg
     9901 caagacttga taatcttcag cttaccaatg agcagcaact tggaattttg gggcaaattc
     9961 ctaatggatg gcctattgaa aataaaggca ttacaggaaa ttttggctgg agagagcatc
    10021 cgcttttaaa aagaagggaa tttcatcctg gtattgattt aagagcagaa attggtactc
    10081 ctatttatgc accagcaagt ggagtagtgg aattttcagg ttatagtgat aatggctatg
    10141 gctataatgt aattttattg cataattttg gttttaaaac agtatttgct catatgatgc
    10201 gcaaagaagt ggtcaaagca ggtcaatttg ttaataaagg gcagttgata ggttatagtg
    10261 gcaatacagg tctttctacg gggccgcatt tgcactatga ggtaaggttt attaataaaa
    10321 ctttagaacc tttgtatttt ttaaatttgc aaagaaaaaa tatgaatgat ttttttaatc
    10381 aagaaaggag agttccatgg caatctttaa taaaggcggt atcagcccaa catccagctc
    10441 tagctcagaa acaacagtaa tttcttcagg tgcgagaatt gagggtaaat tttattttgc
    10501 ttctatgctt catgttgatg gagagttaag tggtattatt cattctgaaa gcattgtggt
    10561 tatcggaaaa aatggaaatt taaaaggtga attacaagca gataaaattg tagtaaatgg
    10621 gtgttttgaa gggcaacttg aggctaatag tttagaaatt ttagcgggcg gagttgttaa
    10681 tggtgatatt tcaacgcaaa aaatttctat agaaaatggc ggtcgcttta atggaactag
    10741 taaaattaaa gaagatacta tcaaacttat tgaaaataac aacgaagaat aatgcaagct
    10801 tcattttatg aatacttaca aaatccaaaa atttgtgaac tttttctttg taaagatgaa
    10861 aaacaagcag atttactcgc tcaagtttca cgatttaagg gtttaaaaac ctttgtttta
    10921 cctgatttta gagcgcagtt tggagatgat ttaagggctt tttctaaaga actttttgat
    10981 ctttgtaaga ttttaaatgc ttatcataaa gaagaagaaa aaaaaatcct tatttctcct
    11041 ttaaatactg ttttaaaaaa acttccttca aaaaaacatt tacaaaatta tcatatcgat
    11101 aaaaaacaaa attttgattt gaaatgtttt gaagatgaaa tttcaagatt gggatacgaa
    11161 tttgtagata tagttcagga taaaggtgaa atttcaattc gtgcggatat tattgatatt
    11221 ttttgtatca atgaagaaaa tcctattaga attttacttt ttggcgaaga gattgaaagt
    11281 ataagatatt ttgatttgca aagtcaaaag tctattccta acgaactaga acattttgaa
    11341 atttgtcctt ttttaaaata ttttgacaaa gaaaattatg aaatttttaa ggacaaatta
    11401 gaagattttc aaagcgatgc tttaatacat gatatcaatt ctttaggctt ttggtgtatt
    11461 gatgattttt ttgattattt agaacttgat tttttagctt gtgaaaagtt tgatattaat
    11521 gaatatgaaa aagatataag ttttgtgaat gcaaaaattt tacctcaagc taaaaaattt
    11581 aaagaattgc aaagttctta caataaagat ttttttgaat ttcataaaaa taaaaaaatc
    11641 acacttttag ctaaaaacga agctttattt aaagctttag agcttgaaga tactcaaaat
    11701 atccattttg taaaaagtga tttaaggctt aatcttatta gtcctgaaga gctaattatt
    11761 tctttaaatc aaaaagaaaa acaaaaaaca agaaaaaaag ctagtttgat tatagatgag
    11821 cttaaaaatg gggattatat agtacacgaa gattatgggg taggtaaatt tttaggtctt
    11881 gagatgatag tgataagcgg agcaaaaaaa gagtttgttg ctatagagta tcaaaattct
    11941 gataagcttt tattaccagt ggaaaatctt tatttgattg ataaatattt gggcgtgagt
    12001 ggatctattc caagcttaga taaactaggt aaaacaagct ttattaaact taaagaaaaa
    12061 ttaaagacta aacttttagc catagcttct gaaattgtta ttatggcggc taaaagatct
    12121 ttggtgcaag caaaaaaaat tacagtggat ttaaatagac agactgattt tatagctagt
    12181 gcgggtttta tttatacaag cgatcaagat aaagcctgtc atgaaatttt gcaagatttt
    12241 caaagtggaa aagtcatgga taggctttta agcggtgatg tgggttttgg aaaaacagaa
    12301 gtcgctatga atgctattta tccagtagtt aaaagtggat tttgcgcatt tttatttgcg
    12361 cctacgactt tgctttctca tcagcattat aaaaccttaa aaaagcgttt tgatcctttt
    12421 gatataaagg tttttaaact ggatcgcttt acaagtagtg cagaaaaaaa acaagtttta
    12481 caaaatttaa aagaaaataa agcttgtgta gttgtaggaa ctcatgcact tttaagtgta
    12541 gaatgtgaaa atttagccct tgttattatt gatgaagagc ataaatttgg agtgaagcaa
    12601 aaagaaaagc ttaaagaaat cactcaaaat tcacatattt tatccatgtc agcaacccct
    12661 ataccaagaa gcttaaatca agctttaagt tctataaaat cttatagtgt tttgcaaact
    12721 ccaccagaag atagaatgga tgtaagaact tttgtcaaag aaaatgatga cgcactttta
    12781 aaagaagcta tagcaagaga gttaagacgt ggtgggcaaa ttttttatat tcataatcat
    12841 attgcaagta tagagcaatg taaaaagcat ctattagaac ttttttctac tttgcgtatt
    12901 ttgattttac attctaaaat cgatgccaag atgcaagaag aagaaatgtt gaaatttgaa
    12961 aacaaagaat atgatttgct tttaagtacc tctatcgtag aaagtgggat tgatttacca
    13021 aatgcaaata ctatcatagt agaaaaaagc gatcgttttg gcatggctga tttgcatcaa
    13081 ttgcgtgggc gtgtaggaag aagtgataag caaggttatt gttatttttt aattgaagat
    13141 aaaaatgcta tcacaaaaga tgctttaaag cgtctagttt ccttagaaag taattctttt
    13201 ttaggcgcag gttctatttt ggcttatcat gatcttgaaa ttcgtggcgg tggaaattta
    13261 ttaggcgtag atcaaagtgg acatattgag caaattggat atagtttata tcttaaaatg
    13321 ttagaagatg aacttaatgc tttaagtaaa aatgaagtgg atcaaaaaga aaataaactt
    13381 gatttaaaac tcaatgttaa tgccttttta aacagcgaac ttatcagcga agatcgctta
    13441 agattagaac tttatagaag acttagcaag tgtgagcaag ttcatgaggt ttatgagatc
    13501 gaaggtgaaa ttgaagatcg ctttggaaaa cttgacattt atactaagca atttttatct
    13561 ttgattacta ttaaaatttt agctttaaat aaatttaaaa gcattagtaa ctatgagcaa
    13621 aatattcaat ttactgcttt aaatgatgaa aaagaactca tcaaggcaaa aagcaaagat
    13681 gatgatgata ttttagaggc aattttaacg catttaagaa aggcttaaaa tggattggaa
    13741 taaaacttat gcagcaattt atagagcaag aaaagattat ttaaagccta tttttgaaat
    13801 cgatcctatt gctttaaaag atttagtagg tatggaaagt caaaaaaaag cactttatga
    13861 aaatacttta aatttcattc aagataaggg agcaaatcac gcacttttat ggggatctaa
    13921 gggcactgga aaatcaagtt taattaaagc tatatttaat gaatttaaag aacagggctt
    13981 aagacttgtc gaattaaata aagaagattt atttgcctta gcagatatca tcgatgaaat
    14041 cagattagaa aattttaaat ttatactttt ttgtgatgat ttttcttttg aaaagggaga
    14101 tgatagttat aaatttttaa aacctttact tgagggaagc atagaaaaag ccccaaataa
    14161 tgtaattatt tatgcgagtt caaatcgtag gcatttatta agtgaaagca ttactgataa
    14221 tcttgatacg caaatcacac atacagaact tcatttaagc gatgctgctg aagaaagatt
    14281 aagtttgagt gatagatttg gtttgtggtt aagtttttat cagggaaatt tagaagagta
    14341 tttaaagatg atagattttt attttaaaga ttattcttgt gataaagagc ttttgcacgc
    14401 taaagctaaa gaatttgcta ctctaagagc aagtagaagt ggtcgtaccg caaagcaatt
    14461 ttatttagct tttaaggaga attttaaatg actggagcac aaatttttac caagctttta
    14521 aatttggatt taaattatca tgattttgat tggcttgaaa atcaaggatt gagtgaattt
    14581 gagcttttaa tttctgtcgt tttaactcaa aatacaaatt ggaaaaatgt cttaaaagct
    14641 ttagaaaatt tgaaaaaaga aaatattgca agcttagaac aaatcaatac tttatccaat
    14701 ttagaacttg caactttaat taagcctagc ggattttata ataccaaaac taagcgttta
    14761 aaaggtttgg tagaaagtat cataaacact tatgaaaatt tagaaaattt taaaacaaat
    14821 gcaagcagag aatggctttt aaatatcaaa ggtttaggtt ttgaaagcgt tgatagtatt
    14881 ttaaactatc tttgcaaaag agagattttg gttgtagata attatagttt gcgtttggct
    14941 ttttacttag gttatgagtt tgaaaattat gaagaattaa gagaattttt tcaaagtgac
    15001 atagagagtg agcaagaaaa tttgtataaa attttaggaa aaaaatgcga actttacgaa
    15061 ctttatcaaa tttttcatgc tttgattgta gcttttgcaa aacagagttt taaaggacaa
    15121 aaattaagcc ctaagggtga agaatggatc aaaattttaa aggaagattt atgaaagcaa
    15181 aaggaagtga acttatacct gttttaacta tagcagggag tgattgtagt ggtggagcag
    15241 ggatacaagc cgatcttaaa acctttagtg cacacaatct ttttggtatg agtgtgattt
    15301 taagtgtggt agctgaaaat accgcaaggg tgatttctgt acacgatata cctactcaaa
    15361 gcgtggatga acaaatgctt gccgtgtttg aagatatagt gccaaaggca actaaaatcg
    15421 gaatgatagg ttcttgtgaa ttaatgagct gtgtagctaa aaatttaagc gagtttaaac
    15481 ctcaaaatgt agttattgat cctgtaatgt ttgccaaaaa tggccatgct ttaatgccgc
    15541 aagaaaattg tgattttttc aaacaaacta taataaaatt tgcagacatt cttactccta
    15601 atattcctga agcagagttt ttatgtggtt ttaagatcgc taatgaagag cagatgataa
    15661 aagcagctaa gcatttatgc agcttgggga ctaaggcagt tttacttaaa ggcggacata
    15721 gtgaagcaaa tgccaatgat gtgctttata atggaaaaga aatttatatt ttaaaaggcg
    15781 aacgcataga aactaaaaat actcacggta caggttgtac gctttcttcg gctattgcta
    15841 gtaatttagc taaaggcaag gatttatttc acgctgttag tgaagctaaa gagtatgtaa
    15901 gaaatgcgat ttattattca cttaatcttg gaaaaggttg tggtcctaca aatcattttt
    15961 tcaagtttct agatgaaaaa taaattagat cttagccttt atttggttgc tactaaggga
    16021 aataaaagcg aggagtgttt tttaaatact ttagaaaatg ctataaaagg cggagtaagt
    16081 atcatacaac ttcgtgaaaa agagcttaat gcaagagaat tttataaact aggcttaaag
    16141 gtgcaaaaac tttgcaagtc ttataaaata ccttttttga ttaacgatag ggtggatata
    16201 gctttagcct tagatgctga tggggtgcat ttaggacagg aagatttaga agcaaaatta
    16261 gctagaaagc ttttaggaga tgaaaaaatc ataggcttaa gtcttaaaaa gttagaacaa
    16321 cttgagttta tacaaggagt aaattatcta ggttgtggag ctattaaggc aacgcctact
    16381 aaagaaagtt cgcttttaag ccttgagctt ttaagtcaaa tttgtgataa aagccctata
    16441 ggggttgtag ccataggtgg gattgacaaa gaagcacttg ttgagttaaa gggtataaat
    16501 ttaagcggtg tggctgtggt tagggcgatc atggatgcta aagatgcttt tttggcagct
    16561 aaagagctaa agcgtaaaat ctatgaaaat ttatctctta aatgaaactc cttttgaagg
    16621 ggtggaaaat cttattttaa atgagattgt tttttatgat tttagtgtgg atttgagttt
    16681 gtatgatgct ttaatctgca cttcaaaaaa tgctttaaaa gctttacaac atgcaaaaat
    16741 cactttaaat ttcaaactca atttatacgc tgtgggacaa agtacagctc aatacgctaa
    16801 aaatttaggt tttaaaaaga ttaaaattcc atcaaaggct tatggaaaag atctttttct
    16861 tgaatttaaa gaggagttaa aaatgcaaaa atgtttgtat ctaagggcta aaaatattgt
    16921 ttcaacttta aatttggatc ttaaaaatgt aggtgtggat ttagatgaaa tgattgttta
    16981 tgaaaatgtt tttaaaaaag gcgacaaaaa gcttatccat cctgctattt ttatattcac
    17041 ctctccttca agtgtagaaa attttttaaa attttacagc ttaaaagaag aagataaggt
    17101 tgtagttata gggcaaagca cagcaaagaa gcttttaaat tttaaaaatc tttatatatg
    17161 cgaaaatcaa agtcttttaa actgtgttaa gctcgctaag actttggttt aattttttaa
    17221 attccaaaaa ttttctttgg gataaataat aatgcttttt gtgagtaaaa tttcatcatt
    17281 gacgttttta tcacgattta aagcaatact aatgtgggct ataataacac catctttgct
    17341 taaatttgca tcgggattga agttggaaaa tttaaaatta acacattgtg caataggata
    17401 aaaatatttt attttaatca aagcttttgt gtaattaaaa tatatattat ctaaacattc
    17461 tttattttct tgctttgctt gatataaaaa atatttagaa aattgtgttg cattgtgact
    17521 taaaatttga gcttgaaggt agtaataact atcttggatt atttttggag tatagctgga
    17581 tatgtttaag gtcaagctca tccatagact tattagcagt attaaaaaaa ttgtccaaat
    17641 taaaacataa gcttttttca cagtaaaatt cttttttcaa ggcaatgttt tgtttgtctt
    17701 tttaggcaaa tttttaattt attgttttgc aggttaaatg agcttatgtt tttagaaatt
    17761 aatccttgtt ggtttaattg ttcattaaat tttggcttta tttcatatat aagttcttca
    17821 ttttgcaatt tgataactaa ttgagcttgc aaaggaataa aactacctgt aaaatttgca
    17881 gatataccat tttccaagat agatattttt tcaatcttat taattttata agcatagcta
    17941 atatgttcat tgtcgttata taaatctttt ctattttgga gttgtgtttt aaaatcagaa
    18001 tgaggtgaat aaagtgtatg attattttct aaaataagag cagaattaat aagataaagt
    18061 ttattatctt ttaggctaat taactcatct tttaaaagac attttaatgt attctgtgaa
    18121 aatgtaatat taatacaatt ttgtattaat ttttctattt taagcaagtt taaatgtgct
    18181 tgagtgataa gattgtttgt atgtaaagca gtaaaattta aatgataaaa atccattaaa
    18241 ggttttgaaa gtaagctagt tataaaagta aaaagtatta gtgatattat aagttcaaaa
    18301 agtgtaaaag ctttgctcat tctttaaaat aaacgctata attttgatct tgaaagtata
    18361 atttttgaaa ttgaaatata ccgtcattaa caaactgttc ttgtaaaact ataggtttta
    18421 aggctgaagt ttgaagtatg atggttttaa aaataggctt ttcatataat tcttcttgaa
    18481 gtttatagag tctttcaaaa atatttaaat tttcatagtt tttgtaaagt tgaatatagt
    18541 aataaaaaat gccaatgaaa attaaagata tgatcgttat agcactaatg ctttctataa
    18601 gtatgaaagc ctttttcatt tagcgctgct agcatttatg gcttcaaaaa aacttccgcg
    18661 aattcctttt tgttcgagta tttttatgcc ttttattgta actccgccag gggagcaaat
    18721 attttctttg ataatagctg gatgttcatg ttctagtaaa gcattagagc ttttaaataa
    18781 agagcgcgta agattgagac taagttcttt tgacaaacct tcataaactc cagcattagc
    18841 aatgctttct gctataagtg ctaaaaaagc aggagcgcag ccgctaatcg ccatagctgc
    18901 attcatttgt atttcattat ctaatttata agccgagcca aaagttttta aaatgtctaa
    18961 aatttcattt tcaaaatgag agtttttaag tatatatggt gtggttgaag ccttgtattt
    19021 agctgctgta ttgggtatta ttctaacata attttgagct ttgatggttt gtagtttttc
    19081 aaaatcaaca ttggctaaaa cagagattaa gatacgtgct tgtcctttta gcatttgagc
    19141 aatattttct aaagcataag gtttaaatgc taaaataaca tctttacctt ctatgttaaa
    19201 atctttgtaa agtaaggttt taaagccttc tttggcgagg gcttgaagtt tttctatact
    19261 tcttcctact atacaaattt cataatcatc ttttaaccca taggctaagg ctgttgccat
    19321 agatccattt gcaagtatat agagcattat tttttaatat aattagcaat ttgatcagct
    19381 tgaaaaaagt cgggataatt aactgtatct agtatcactt gtaccatagt attattatca
    19441 agattaatga ctactggagc tagaaaattc actgtcgatt cttcaatgct ttttgctatg
    19501 gctactatat taaaaatttt catattagat tcaggtgtta aagaaagaag ctcttgataa
    19561 taagttggta tatcaaattc ataatcaggt ctaatcaaat aaggattaat taaaacaaaa
    19621 gaaaagtctt taccatcaag acttttaagt cttacaaata cttcatcgat agttgaaaat
    19681 tccatatttt tggtttcttc aaaacctaag atagggcatt taacagctag ggtcatgttt
    19741 tctcctcaag ttataatgtt taatatttta acataaaata agcaataatc attccaaaat
    19801 tttaaattat ttaattaatt ttattataat tttagaagaa cataattata aaatcgttaa
    19861 aatatatatt tttgagaata taaatcaagg tgaagtatga aaaaaggtat ttttttattg
    19921 gtttttttaa gtgttttttt tagtgcgtgt agtacgaaaa atgatgaagg tttatacaat
    19981 cttagtgcta gtgagtggta taagcaaatt attaaagatt tgcaggacaa ggatttggaa
    20041 aaagctgatg atcattataa tggtatggca agtgagcatg ttgccgatcc tttattggaa
    20101 actactttaa ttattttagc acaagctcat atggatgaag aggaatataa gttagctgaa
    20161 ttttatttag atgaatataa taaaaaattt ggaaattcac gcaatgctga ttatattcgt
    20221 tatcttaaaa ttaaggcaaa atttgatgca tttgcagtgc caaatcgtaa tcaggcttta
    20281 atgcttgaaa gccaaaaaga aatagatact tttttgaaag attatcctta tacagaatat
    20341 gaacctttgg ttcaaacaat gcttacaaaa tttaatttag cggtttttta tcttaatagt
    20401 actatagaaa atctatacca gcgcataggg catgatgaaa gtgcacaaat ttataaacaa
    20461 agacttcaag aaagtgaatt ttatcagcaa agtattatca aacctgagct tccttggtat
    20521 agaagtatat ttgaaagatt ttaataaaca aggaaaataa atgcagattg aagagataca
    20581 aaattatcca gcaaatttac cagtattggt tgaagatgaa ttatttttat atccttttat
    20641 gataactcct atttttatta acgattcatc caatatgaaa gctttagatc ttgcgattaa
    20701 aaatgatagc atgctttttg ttgcaccttc aaagttggaa aatggaagaa attttgatga
    20761 aatttataat tgcggagtga ttgggactat catgcgaaaa gttcctttac ctgatggaag
    20821 ggtgaaaata ctttttcaag gatatgctaa gggtaaaatt atagagcaaa tttctaataa
    20881 acctttagaa gccaagatag aacttataaa agaagacttt ttagaaggaa ctaaaaaaga
    20941 agcgcttctt gaagttttaa aagagaaggt aaaaaatttg gcaaatatta gtcattattt
    21001 ttctccggat cttttaagaa caattgaaga aggttttgat gcgtctagga tttgtgattt
    21061 gattttaaat actgtgcgta ttaaaaaaca agttgcttat gagttttttg ttttaacaga
    21121 tcttgagcaa aaattagtaa aattaataga tttaattgcc caagaaatag aagccaataa
    21181 aattcaaaaa gaaattaaaa ataaagtaca ttctcgtatt gataaggtaa ataaagaata
    21241 ttttttaaaa gaacaattaa gacaaattca aaaagagctt ggttctgaca cacaaaaaga
    21301 agatgaggtt agagagtatc aaaagcgtct ggagctaaag aagaaattta tgcacgaaga
    21361 cgcttataaa gaaatcaaaa aacaaattga aaaattcgaa cgcattcatc aagataattc
    21421 cgaagcatcg atgattcaaa cttacataga aacagcatta gatattcctt ttgaaaaaat
    21481 ttctaagaaa aaacttgata ttaaagaagt ttcaaaacag ctcaaccatg atcattatgc
    21541 attaaataaa ccaaaagaac gcatagaaga atattttgca gttagggaac ttttagaaaa
    21601 aagaaaaata gcagaaaaag atggtgctaa agttatactt tgtctttatg gacctcctgg
    21661 cgtgggtaaa acttcactgg caaattctgt ttcaaaagct ttaaaaagag agcttattcg
    21721 catagcctta ggcggacttg aagatgttaa tgagctacgt ggtcatcgta gaacttatat
    21781 aggcgctatg cctggacgta ttacccaagg actcatagag gcaaaacaaa ttaatcctgt
    21841 aattgtattg gatgaaattg ataaattaaa tcgcagtttt agaggcgatc caagtgcggt
    21901 gcttttagaa attttagatc cagagcaaaa ttctaaattt agggattatt atttaaattt
    21961 taatattgat ttaagtaaag tcatttttat agcaacggca aatgatatta gcaatattcc
    22021 tgcaccttta agagatagaa tggaatttat agaacttagc tcttatactc caagtgaaaa
    22081 atttcatata atgaaaaaat atttaattcc agatgagctt aaaaaacatg gcttaaaatc
    22141 caatgaatta tctattgatg atgaaactat agagttaatc attagtgatt atactcgtga
    22201 atcaggagtc agaaatttgc gtcgcaaagt ggcagagttg tgtcgtaaga gtgctaaaaa
    22261 actactttta gaaaatatta aaaaagtcat tattaataca aaaaatttga atgaattttt
    22321 agataaaaaa gtttttgaaa tagaaaaaaa taatggagaa aatcaagtag gtcaggttaa
    22381 tggtttggct tggacaagtg taggtggaga tgttttaaaa gtagaggctg taaaaattaa
    22441 aggtaaagga gaattaacgc tcacgggaag tttgggtgat gtaatgaaag aatcagctag
    22501 aattgctttt agcatgataa aagttttaat cgatgaagga aaaataaaaa tacctaaaaa
    22561 aataattatt gatcctaaag ttaatgttta tgatagttat aatattcata tacatgtgcc
    22621 agatggagct actccaaaag atggcccaag tgcaggtatt acgataagca cagctattgc
    22681 ttctattttt agtgataaaa aggttaaagc agatgttgca atgacgggtg aaatagattt
    22741 aaaaggaaaa gttttaccaa taggcggatt aaaagaaaaa ttaattgcag cttataaagc
    22801 agatataaaa acagctttaa tcccaagaaa aaattacgaa agagatttaa aagatattcc
    22861 tagtgaggtt agagacaata tggaaatcat tgctgttgat actttcagtg atgttttaga
    22921 atatactttg gtttaatttt attttgagga taaatgtata agaaagcaaa ctttttacaa
    22981 gtttgctttt aaaagattat agtccttcaa aaggattatt gattacttct tttctatcca
    23041 ctatataagg gataagggct acatgtcttg cgcgtttgat tgcaacttct accatttctt
    23101 ggtatttttt gcttgtgcct gttaaacggc gtggcatgat tttaaatctt tcagataaag
    23161 catgttttaa cattgctgta tctttataat caataaattc aacttttgct tcagtgtatt
    23221 tgcaatattt gcgagagtat tttctttttt ctgccatagt ttatccttta aaatggtaaa
    23281 ttagtatcat cgctatcata agcatcgata tcaatttctt ttaatttttc ttcgtgttgt
    23341 gggctttggt ttctctgtgg agcagggttt gcttttgctt tattaaaatt ttgattttca
    23401 ctcatataag gatcatagct ttgattttca tagtttccac tataattgtt gtttgaaaag
    23461 ctattattgc caaaatttcc gccttgttgt ggagcattgg aattgccaag catttccata
    23521 ttttcaactt gaatgctatg tttagagcga ttttgtccat tttgatcact ccattgttca
    23581 aatctcaaac gtccttctat gagtactttt gaaccttttg taaggtattg gtttgcaact
    23641 tctgcggtgc gaccataaaa gcttatatca ataaagcaag tttcttctct tttttctcca
    23701 tttgcggtaa atcttcttgt tactgctata gcggaagctc caatagcact accgctttgt
    23761 gcataacgca tttctatatc acgtgtaaga tttccaacca aaacaacttt gttaaacatc
    23821 tttttcctta ttgaatttca ggagcatcta aaggtttaat ttctttttta gattgcttaa
    23881 tcccgtggct tagtttttcc caagctgcaa tttctttttt attttcatat tttacgatta
    23941 aaaatcttat tacttcttca gtgattctta acaccctttc aagctcagcg atcaagtttg
    24001 taggagcttt gaaataaatc acaaaataag ttcctctttc gtattttttg attttatacg
    24061 ctaattttct agtacccatt ggaacaacag tttcaatttc tgcactattt ttggttagga
    24121 cttctttaac gaattccaac ttcgtattca cttcctcttc agtaagtgtt ggttttaaga
    24181 taaataaaac ctcataatgt ttcatctttt ctccttatgg atattaaagc ccatttttat
    24241 gagcaaggat tttgcataaa gcaagactag attatatcaa aatatactta attagtcttg
    24301 aatacttaag gttttatcta aatttgtttt gatttcttca agcatagcaa aacgtttttt
    24361 atacatggag cgtttttgcg aagggatttc ttctaggttt ttttgagagt ggtggagttt
    24421 atagtatttg tgtttattga tttttattaa ttctccacca ttttctagcc aaattttttg
    24481 ataatctaca aaatagcctt tttcttttcc tttttgagaa cggatttgat ttttttcatg
    24541 tacacctaaa gtagcttgaa gttttaaaat ttcacaaagc atcttagagc attctataag
    24601 taaagcaaca gggcgcaaac catgacattt tttagttaaa attttattaa tttctaaaat
    24661 attaaaatct ttgtatttat gtccttgtat acaagaaagt agaagattgt tttctaaagt
    24721 aaagcaaaaa ttacattgta agattgtgta ttttttaaat tttaaagaaa aagcccaaaa
    24781 accttcttcg caaacattat agttatatcc taaaaaaagc tcaaaatctt catcaaaaga
    24841 aaaaattatt tgttcctcgg gaagaaattt aaaacaagcg agtcccttat caacatcata
    24901 aataagtgtt ttaacacgtt catttgcttt aaaactttta tcgcaaaatc ttcttgtagc
    24961 attgtaacaa gcataaggtc tttgagagaa aaagtctttt aaatgtttat ttttttcttt
    25021 attaagcgtt ttttctagaa gtcttacttg aggaaaatat aaaatttttc ttgcttgaaa
    25081 acgcaaatag cgccaaaaga ttatactttt tcttctatca gtaaaatttg gaatagggta
    25141 ggaaaatttt ttattcacct ataatccttg atatatcatt ataagttgca aagagcatta
    25201 aacttaaaag tattgccatg cctgtatagc ttaaatattc aaaagtacgc tgtggaactt
    25261 tgcgtctaaa aatcatttca taaagattaa aaagtatatg tcctccatca agcataggaa
    25321 taggtaaaag atttaaaatg cctaaattta tagaaattaa agcagtgata aataaaagca
    25381 aagtaaagct attttgtgca gcctttgagg taatttcagt catggtgata ataccgccta
    25441 aattttttgc ttcaacttca ccacttatga gttttacaat acccttaatg atgagtgtag
    25501 aagcttgaaa actttcttgt gcggcatatt taaaactttc taaaccttgg tgttttacaa
    25561 gagtgcttgt cccatttgga ctgactccaa gttgaggttt ttcaacgatt tgtccaaagt
    25621 cattgtatcc ttgtcctatt tttggagtta aaataaattc taaatttttt ccttctctat
    25681 tgattaatat tttcaaagga tctaaactta aatgctttga aatttcatca aaggtttgaa
    25741 ttcttatacc gttaatttct aagatagtat catttttttg aagtcctatt tcttgtgcag
    25801 cagagtttgg cgctatgttt cctatttgcg gagcaagttt gtttagacct aaatttccta
    25861 tgataatata aagaaaaaaa gctaaaatta gattaaaaaa tggtccagca aaaagaatat
    25921 aaatcttttt taaaggactt aaaatgctat agctatcttt gtctagattt tcaaaaccag
    25981 gacgcatatc atcttgtcct ttaagtttaa catatcctcc aagtggtaaa gtgcttaagc
    26041 gatagtttgt gcctttaaat tcacgctcta taagactttt tccaaatcct atactaaaaa
    26101 cttcaacttt tacacccaaa gatcttgcag ccaaaaaatg tcctaattcg tgaaagaaaa
    26161 ttaaaaatga gatgactaaa acagttgcta aaaattcaat agaataaaat ttaattccca
    26221 aaatcaaaat aacaattaaa aataataaag atctcatttt tctccttttt tttgagcttt
    26281 tatataagta tagatgtatt caaatccaga ataaagagtt aaaatcaaag ctatgtaaag
    26341 tagaatttca ccgcctatcc actccatgat taaaaatcct atcgcagtca tttgaaaagc
    26401 ggttttaagt ttgcctgcaa aagaagcatt gacatttaaa ttttcgctaa tcattacaac
    26461 tctaaaacct gtgataaaaa attcccttac taatataata taaattaccc attcattagc
    26521 ttttcctgta agtaaaagcc ctaaaaaagc tgctaaaaca agcattttat cggctaatgg
    26581 atctaagatt ccaccaagtt ttgtagtttg tttccaagtt cttgcgatgt atccatcaaa
    26641 aaaatcactt aaagctgcta atgaaaaagt taaagcagca aaatagttaa tccaactttg
    26701 atgaatattt tcaaaatgat gaattaataa aaaaaatagc aaaggcgcta aaaccattct
    26761 aaaaatcgcc aagatattgg gtaaattcat aacaagcctt gtgaaattaa atgtaaaatt
    26821 ataatcaaaa ttgtataaaa tttaagcaaa gacttagtaa aaatacaaaa aagaatcagt
    26881 ttatttttat ttaaattttg cttaaaagca aaatttaaat aaattttaca acttcatcaa
    26941 aactaaaacg atttttttga ggattttttt tatcgttgca atatcctaaa gccaccacca
    27001 aacttgatct ttctttttga atatcaagtg ataaataaga atcaagcttt tctttatcaa
    27061 aaccacctat agtgcagctt gctatattta aagcattagc actgtaaagt atgctagcta
    27121 gagctatatg agcttgttct cttgcataag atattttttg ttcttgattt agagatttta
    27181 aaaaaggcat ataagtatct aagcgttttt gcatttctgt ttcactcata tctctttttc
    27241 taagtttttc ttcaaaataa tccaaaaaat caagtcttga aatgattata attaatgcag
    27301 cacaatcttt tacatgtttt tgttgattgc aaattttaga aagttcttct tttcttttct
    27361 catcttgcac tactataaat ttccaaggtt ccagtcccaa ggagcttggg cttaatcttg
    27421 ctatttctaa aatagaattt aaatcctctt ttttgagttt ttcattttta aaatttctac
    27481 aagaatatct tgtgctaaaa atttcaagtt cttttttcat tatttttcct tgtaaaattc
    27541 gacgacttca ttaaaattta agcgttgagt agaatatttt ggttcatggg ctttatatcc
    27601 taaggataaa attacagcag tttcaaaagg ataagttaaa ttaagaaaat tatcaacttt
    27661 agctttttca aagccaccta tcatacaaga atcaatacct aagctcattg cagctagcga
    27721 catttgcatc atagcaagat agcattgaag ttgtgcgtaa tgatagagtt cattatcatt
    27781 cattgcattg gttttatggg tgtaaatttc taaaattttt tgaaaatttt cttcgctaga
    27841 acctgagaaa cgacgcactt gtttttgtgc aaattcatct ttgctttgaa gatcttttct
    27901 tgctagaaaa atgatattat gactcgcact tgctacattt tgttgattgt aacatagggt
    27961 tgagagttta agattgtgtt ctttttgttc taatactaca aatttccaag gctcaaatcc
    28021 atgtgagctt ggggctaaga ctccactttc taagataaaa tgcaaatcct tttcattgat
    28081 ttttttatca ttaaaaagtt tacaagctct gcgttttgaa attagttctt taaaattcat
    28141 tttattcctt aaaatcaaaa ataataatat taattataaa atgcaaagct taatcaaaaa
    28201 atattatagt ttgatatttt tcttaaaaac aaaaccggat ttttcaaaac ccattttttg
    28261 gatataaaat tcatgagctt gtgttctaaa aaaacttgaa cttagttcta attcttcata
    28321 tccttgatct tttgcccaaa tttggatttt tttcaaaaaa gcttgaccta taccttttcc
    28381 tcttaaagct tcatctacga caaaatcaca aatataaaga caatgattat gataaagtac
    28441 attaaagggc atgactccac aagctgcttt gtagcttccc tcattttcat aggcaaaaag
    28501 tttataatgt tgagtttgtg tagcaagttg gattttgtct aaaaaatctt tcaaagatag
    28561 gttatttctt aattgtttta tcaagggata aattttttcc aagtcttctt ttagcttaat
    28621 ttctttcatt tttaaatccc ttaaatttca aaaatctcag gttttaattt taaaagtagg
    28681 caaaaagttg ccaaaacagc ttgttcttgc ataaattcac gatctccatc taaataaagc
    28741 gtttcttgga taaaagttcc atctctaaac attgcaccta tataaatagt gcctgatttt
    28801 atttttccct catctttttc gccaactact ccgctaatag ctaaggcaaa atcaggatta
    28861 gctgttttaa aaataccttt tagcataaaa taaacacaac gttcactgta ttcgccatta
    28921 ttttctaaga tgctttcgct aattccaagc cattcgtgtt tgatgcggtt ggaataactt
    28981 acaatagatc cttcaaaaat ttcacttaca cctgaaattt tggttaaggt gcttgcacaa
    29041 agtccgcctg tgcaactttc agcaaaagaa atttttaatt ttttttctaa aagtttagag
    29101 cttataaaat gtataggatc tttacctaaa aacacctttt gtccaaaaag attttttacg
    29161 ctatttaaaa aaccatcaag ttttccaaaa ttagcgcaag tggccttaat aagcacaaga
    29221 ttatctaaaa gcttggttaa ttttatattt atctcataag attttgttag ggtttgcagt
    29281 agtaatatag cgctttcatc atccatgcca aaaatgcaaa aatatgcaaa atttaatttt
    29341 atatgcccaa gaagattggg taatttttcg cttggattta ttttaacgac attgattttt
    29401 gaatttgaaa aattacacac aaagctattt ttactaaatt ctgctttatc tggaaccaag
    29461 gtatcatctt ttaagataag attatcatca tttaaagttg ctaaaatttt agcaacagtc
    29521 gcataatgca aagggcttgt aaataaagtg ataaaatcat actgatttaa gaggttttca
    29581 agcaaaaagg gtaaatcttt atcggtttta ctttgtatgc gaatttcgtt gatttcttta
    29641 aatttttctt cataagttct ataaatataa tttttgaatt tttcgtttat agtaagctca
    29701 tctcctataa gataaagcaa atgtttcata aattttcctt tttttcttat aattatagcc
    29761 aaaaacaaag tagaaattaa agctaatttg agtagaattt aagattatta aaaattaggt
    29821 ggaaaaaatg gactacaaag aaactctact tttgcccagc actacttttg ctatgcgggc
    29881 gaatttagcg gaacttgaac cgcaaagatt taaaaaatgg tttgagcaaa attatgctta
    29941 tgaaacaatg aaagaaaatc gcaaaaatgc gaaaaaaagt tttactttac acgatggccc
    30001 cccttatgct aacggacata tccatatagg acatgcttta aataaaattt taaaagaaac
    30061 tattatcaaa acacattatt ttaaaggtga gagtgtgcgt tttactccag ggtgggattg
    30121 tcacggtttg cctatagaac aacaagtaga agtaaagctt ggagaaaaga aaaaaagctt
    30181 aagtaaaaaa gaaattcgtg agttttgcag acaacatgcg agtgaatttg tagatatcca
    30241 aagagaagaa tttaaaaatt taggcattat tgcggattgg gataagcctt atttaactat
    30301 gaaatttgag tttgaagcag cgatttatag aactttatgt gagattgcta agaaaggctt
    30361 actttgtgag cgttctaaac ctgttttttg gagttgggcg gcaaagtcag ctttagcaga
    30421 agctgaggta gaatatcaag ataaagaaga ttattctatc tttgtggctt ttgatttgga
    30481 tgtaaaagct tgcgaaaaat taggtgtttc aaaagcaagc gcagtaatat ggacaactac
    30541 gccttggact ttagtggcta atcaagctat agctttaaat cctaatgaaa attatgtgat
    30601 caccaaagaa ggtttgattt ttgcaagtgc tttacttaaa agtatggtag aaaaaggact
    30661 tacaagtgga gaaattcaaa aagaattaaa cgcaaaagaa tttgaaaaac ttgaagctat
    30721 caatccttta aatggaagaa aatctgtttt aattatgggt gagcatgtat tgatggatgg
    30781 tggaagtgga cttgtgcata ctgcaccagg acatggcgaa gatgattact atgcttgttt
    30841 gaaatacggt attgaagttt taatgcctgt tgatgatggt ggatgttatg atgaaacttt
    30901 aagagctaaa gagcttttgc cttctcattt gcttgaagag tttataggtc ttcatatttt
    30961 taaggctaat gaaaaaattt tagaactttt aggcgcaaaa ctgttacatt cttctaaatt
    31021 tatacactct tatccgtttt gctggagaac acataaacct gtaatctata gagctactaa
    31081 acaatggttt attttaatgg atgagccaaa acttcaagga aaaaccttaa gagagtgtgc
    31141 aaaagaacaa cttttaaaaa caacttttta tccgcaaagt ggggtaaaaa gaataggttc
    31201 tatggtggaa aatcgcccag attggtgtat ttcaagacaa agggactggg gaacgcctat
    31261 agcctttttt agagataaaa acactaaaga agtcattttt gatgatgagc tttttgactt
    31321 tgtagcggct atttttgaaa aacacggcgc tgatgcgtgg tgggagtttg aaatcaaaga
    31381 tttaattcct acaaattcaa aatacaacgc tgaaaattta gaaaaagtat atgatatttt
    31441 agatgtttgg tttgatagtg gaagtacttt taatgcggtt ttaaatagcg gactttatga
    31501 cgcaggagaa aaaagagcaa gtatgtattt agaaggaagc gatcaacatc ggggttggtt
    31561 tcaaagctct ttgcttgtag gtacagcgat caatgaaagt gcaccttatg aaagcatttt
    31621 aactcatggt tttaccaccg atgaaaaagg gcaaaaaatg tctaaatcta aaggcaacgt
    31681 gatcgctcct gaatatgtag caaaaaccta tggagttgaa attttaagac tttggatact
    31741 tttaagtgat tattcaagtg atttaaaaat ttcagacaat atcttaaaac aagtaggcga
    31801 acaataccgc aaaataagaa acactataag atttttactt gccaatacca atgatttaaa
    31861 agatttaaaa gttaaagaat ttagttttat tgataaatgg atattaagcc gtgcaactaa
    31921 agtttttaaa gcaagcaaag aggcattttt tgcttatgaa tttgctaaag gttttagttt
    31981 gcttttaaat ttcttaagtg cggatttaag tgggatttat cttgatatca gtaaagatag
    32041 actttattgt gatagcgaaa atgcccaaag aagaaaatct gctcaagtgg ctatggcttt
    32101 gatagcaaaa gagcttttaa atttacttgc tccaaattta agctatagtg tagatgaggc
    32161 tttagaacat gctaatgttt taatcaaagg cgatgcaaaa gatgtatttg atctaagttt
    32221 aactcaggat tttgattatg attttggtat agatgataca tttttaatga gtgctagaga
    32281 gaaatttttt gaacagattg atatacttaa aaaagataaa atcattaaat ctactttgga
    32341 attaaattta aacatcagtt ttaataaatt cccaaatgag gaattagccg attggtttat
    32401 ggtaagtcaa atcagcaatg aaaatgaaga aattttggct gaatttgaag tagagaatga
    32461 gaaatttaaa atcaccaaag cttcactttg taaatgccca agatgttgga aacttcaaag
    32521 taaagatgaa gaaacacctt gtttaagatg tgaagaagtt ttaaaaggga ttcaatgcta
    32581 gaaaatccta ttccaaatag cattatcatc acaactatag cggtggtttt ggcttttagt
    32641 gctttagcag tatttttgat caaaaaaaca aaggaaaata aatgataact ttaaaagaag
    32701 ctttaaaata ctccaaagaa gaacttgaaa atttaaaaaa agaactcaat gaaaaagcaa
    32761 aaaaagaaaa aaaaataggt gcttatatcg aacaattttt agataaagac ttaagtgttt
    32821 caggtgaagg tgtgcctgta gctataaaag ataatatcag cgtaaagggc tgggagctta
    32881 ctagtgcgag taagatttta caaggttata tcgctcctta tgatgcaagt gtgattgtta
    32941 atttaaaagc taatggtttt tctccttttg ggcgttgcaa tatggatgaa tttgctatgg
    33001 gaagttcaac agcgagttct tattatggca aaactttaaa tcctttaaat tttgagcgtg
    33061 tgccaggtgg ttcaagtggt ggaagtgctg ctgcggtagc gggtggcttg gctttggcaa
    33121 gtttgggttc tgatacagga ggatctgtac gtcagcctgc agctttttgt ggttgcgtag
    33181 gatttaaacc gagttatgga agagtgagtc gctatggctt agcttcttat tcttcaagtt
    33241 tggatcaaat tggggtttta acgcaaaatg tagaagatgc ggcaatttta tatgatgcga
    33301 tcgcaggata tgataaaatg gatagcacga gtgcaaatat cgagtttatc aaaaccgctc
    33361 caaatttaaa tgcaaataaa aaattaaaaa ttgcagtgat tgaaaattat gtcaatgatg
    33421 cagatagtga agtaaaaaac gcacttttaa aaaccataga tatgttaaaa gctaatggac
    33481 atgagattgt atataaaaat ttgcttgatt ctaagtttga tatcgcagcg tattatatca
    33541 tcgcaacagc tgaagcaagt gcaaatttaa gtcgttatga tggggtgcgt tatggcaagc
    33601 gttctgaaaa tatccaaaat ttaaaagaaa tgtatgtaaa tacacgcagc gaaggtttta
    33661 gagaagaagt aaaaagaaga attttgttag gaacttttgt tttaagcagt ggatattatg
    33721 atgcgtatta tattaaagca caaaaagcta gagcttttat taaggcaaaa tatgaagaaa
    33781 ttttgcaaga ttgtgatctt atttttatgc ctgtaacgcc tacaacggct tttaaatttg
    33841 atactcaaaa aagccctatg caaacttatt tagaagatgt ttatactatc tctgtaaatt
    33901 tagcaggact tggaggcatt agtgtgcctg ttgcaaaaga taaagaaggg cttaatatat
    33961 cagcacaact gatttgcaaa gcttatgatg aacaaacctt attagatggg gctttaagtt
    34021 tagaacaaat gattaaacat taaggatgaa agatgaaaat tgtaaaaaga gctttaactt
    34081 ttgaagatgt attattgcgt cctgggtatt ctgaagtttt acctaaggaa gtaaaaattc
    34141 acactaaatt aacaaaaaat atcactttaa atatgccttt aatctctgcg gctatggata
    34201 cagttactga acacagggct gctattatga tggcaagact tggagggctt ggagtgattc
    34261 ataaaaacat ggatatagcc tcacaggtta gagaagtaaa aagagtgaaa aaaagcgaaa
    34321 gcggggtgat tatcgatcct atttttgtaa gtcctaaggc aagtgttgcg gaagctttag
    34381 aaattatggc agagtataga atttcaggtg ttcctgtagt agatgaagat aagaaactaa
    34441 taggcatact taccaatcgt gatttaagat ttgagagtga tttttcaaat ttggttgaaa
    34501 atgttatgac taaaatgcct ttaattactg ctccaaaggg ttgtacttta gatgatgcgg
    34561 aaaaaatttt cagcaccaac aaagtagaaa aacttcctat agttgatgaa caaggacgct
    34621 tggaaggact tatcactata aaagatctta aaaaacgcaa agaatatcct gatgccaata
    34681 aagataattt tggcagatta cgcgtgggtg cggctatagg agtagggcaa atggatcgtg
    34741 tgaatgcttt agttgaagca ggcgttgatg ttgttgtgct tgattctgcg catgggcatt
    34801 ctaagggtat tattgataca gtaaaagcaa ttaaggctaa atatccaaat ttagatctta
    34861 tcgcaggaaa tatcgccact gcagctgcag caaaagcact ttgtgaagca ggagtagatg
    34921 cggttaaagt aggtattggg ccaggaagta tttgtactac acgtattgtt tcaggtgtgg
    34981 gcgtgcctca aatttcagcc attgatgagt gcgtggaaga agcaaataaa tttggcgttc
    35041 ctgtgatagc tgatggcggg attaaatatt caggtgatat cgcaaaagct ttagctgtag
    35101 gtgcgagttc tgttatgata ggatcgcttt tagctggaac agatgagagt ccaggagagc
    35161 tttttactta tcaaggaaga caatataagt cttatcgtgg tatgggctca cttggggcta
    35221 tgcaaaaggg aagttcggat agatattttc agcaaggtac tgctcaagat aaactcgttc
    35281 ctgaaggtat agaagggcgt gttccttatg tgggaagtat aagaagcgtg gtgcatcaac
    35341 ttttaggagg tttgcgttct tctatgggtt atgttggggc taaagatata gaagattttc
    35401 aaaaaagagc cgaatttgtt gaaattacca ctgcagggct taaagaaagt cacgtgcatg
    35461 atgttactat cactcatgaa gcaccaaact acaaggttaa tcatcaatga gttttgaaga
    35521 aaatttaaaa cacgctaatg aatctttgga aaaattaaat aatcaagagc ttgccttaga
    35581 tgaaagtgta aaaatttata aagaaggttt agagagtatc aaaaaagcaa gacttgagct
    35641 tgaaaaagca aaattagaag tggagcaaat cgatgagtaa aatagcagct ttacagtttc
    35701 caactttagc tttaagtgaa tcaaggcttg attattatct taaagcttca aaagacaatg
    35761 gagtaaattt agtagttttg ggagaatatg tgatcaacag tttttttaca gaacttttgc
    35821 atatgccaaa aaatatgata aaagaacaaa gcgaagctaa aaaagaaagc ttgattaaac
    35881 ttgctaaaaa atacgaatta gaaattatcg ctccttatgt aagcgttgaa gctaaaagtt
    35941 ataaaaaact ttgcttaaaa gttactccaa atggtgtgaa aagttatgaa cagcaaattt
    36001 taatgcctta tgaacattgg aatgaagaaa aatttttcag caacaaaact ccatcagaat
    36061 taaaaatttt tacttttaat tatgaaaaat taaaatgtgc tttgcttttt ggttttgaga
    36121 cacattttga tattttttgg caacagatta tggcgaaaaa aattgatttg gttatcgttc
    36181 ctagtgcttg tacctttgaa agcaaacaaa gatgggaaga acttttaaaa acaagagctt
    36241 ttttaaattc tacaagcatt ttaagagtaa atcgcatagg caaaacaaaa gatgagtgga
    36301 atttttacgg cgatactttg tttattaatg cttttggtga gatagaaagt aaattaggtt
    36361 ctgaagaaga aatgcttatt atagagccta aaaaaagtga tgaagcaaga aaactttggg
    36421 gttttgataa aattcttaag aatttttaaa gaaggtgaat atgagaaaaa ttttacttca
    36481 aatttttatt tttagtgtat tatttatagt aacttttacc attaatcgta ttttaatgca
    36541 aaattctttt atccctactg gtttaattag tgataaaaat gaaatctttt taatgtatct
    36601 tttaggtgtt tttcatgata taagattttt aagcgtagcg tttttaccat tctt
//
LOCUS       DAPIYB010000005        31782 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.005, whole genome shotgun sequence.
ACCESSION   DAPIYB010000005 DAPIYB010000000
VERSION     DAPIYB010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 31782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31782
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.005"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            9..3497
                     /locus_tag="RJ318_000194"
     CDS             9..3497
                     /locus_tag="RJ318_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HDV7430102.1"
                     /translation="MIQKALALAEELQGQIEANISNSEKEFHAKMQKLLNNPKNKVML
                     IELLDRSFRCKDKNASFELIEYTLSKYGIADFFSTFEKFLLFSFLNFGKFAPNLSVPF
                     FVKHLREDTKAMVLDANPSVLEPHIKKRKEQDKITLNVNLIGEEVLGEAESKYRMQKY
                     EEALKSSYITYISIKITTIFSQINIIDFNYSKEEVVKRLDYLYALALEEEKKQGVSKF
                     INLDMEEFRDLELTVAAFMESVAKFDIKAGIVLQAYIPDSYKYLKKLFAFSKERVLKG
                     MKPIKIRFVKGANMESEETIASQRGWELPTFYKKIDTDSNYNKMLDFILEGDNYKYIN
                     IGIASHNIFEIAYAYTRISEVGALDSFTFEMLEGMSLQCSYELSKMHDLILYAPVCDE
                     AHFNNAIAYLVRRLDENTSEDNFMRYFFNLKVGDKNWNIQKELFLKSLEGIKTLDNTT
                     HRKQDRNKESNIISSYEGKKFSNESDTDFILAQNRVWAKEIKTKYENLKDYDVYPVIG
                     ELDFKAENLNVLEVKDKIEDRVIGKAYLAGEKEIKQALEVAKNSKFTQKSHDEIYQIL
                     AKSAKLMRERRGDLIGLAALEVGKTFLEIDPEVSEAIDFIEFYPHSLEELKKQNPKVT
                     FTPKGIGVTIAPWNFPIGISVGTIAAPLAAGNVVIYKPSSLSTLTGYMLCKCFWDSGI
                     PKDALIFLPSKGSDISKYLLIDEAIKFSILTGGEDTAYAMLKANPTLLLSAETGGKNA
                     TIVSKFADRDSAIKNIIHSAFSNSGQKCSATSLLVLEEEVYHDEEFKKTLVDAASSMA
                     VGNPFEFKNKLGTLADKPSSKVQKALDELQPYEEWALKPKFLEDNPYLMTPGIKYGTK
                     KGDFTHMNELFVPILSVMKAKDLKEAIDIVNSTGYGLTAGFESLDEREWEYFHTHIEA
                     GNIYINKPTTGAIVLRQPFGGIKKSAIGLGRKVGIYNYITQFLEIKQEDFDDHLIEDK
                     FSKKLAQIDLKEAQDFINNLIKMSQSYAYHYKNEFSVSKDYVNIRGEDNLFSYTKIKN
                     MVLRLCGNESLKDVLGVVLGANIANIDLSISYDEQDVSMIERIVQSIGAKVLFLKENK
                     ENFIKSIKEYERVRYLAKPDVNDEIYKEAAKLAKIIIREKPLLNGRFELLNYFNEKAL
                     SISFHRYGNLGIRAIS"
     gene            3515..4984
                     /gene="putP"
                     /locus_tag="RJ318_000195"
     CDS             3515..4984
                     /gene="putP"
                     /locus_tag="RJ318_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDV7430103.1"
                     /translation="MEVVQINTPIAVMFVVYALLMLYIGFYFYKQNKNSEDYFLGGRT
                     MGPVISALSAGASDMSGWLLMGLPGALYVSGFIDSYIAIGLTIGASLNWIFVAKRLRI
                     YTSVIANSLTIPDYFETRFDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFG
                     IRYDYALTTGTIIIVAYTFLGGYKAVCWTDMIQGLLMMMALIIVPLVMLYHLGGFGEA
                     MNIVREIKPQALSMGEGVGIVSIISALAWGLGYFGQPHILVRFMSIRSTKDIPMATFI
                     GIAWMAVCLLSACMIGILGIAYVHKFELSLQDPEKIFIVMSQLLFNPWIAGILLSAIL
                     AAIMSTASSQLLVSSSTIAEDFYKKIFREDAPSHIVLNLGKLGVLLVAVIAFLISTDK
                     NSSVLSIVSYAWAGFGASFGSVMLFSLFWSRMTRVGAILGMITGAATVVLWKNFANSG
                     LYEIVPGFLVASVVIIIASLFTNVRFGTKAAYEKMLKEL"
     gene            complement(5000..5227)
                     /gene="yedF"
                     /locus_tag="RJ318_000196"
     CDS             complement(5000..5227)
                     /gene="yedF"
                     /locus_tag="RJ318_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDV7430104.1"
                     /translation="MKITYSLNLQGEACPYPAIATLDVLPKLKSGEILEVLCDCPQSI
                     NSIPQDAKNRGFKVLEIDQSGPTLRFLIQKP"
     gene            complement(5250..6440)
                     /gene="yedE"
                     /locus_tag="RJ318_000197"
     CDS             complement(5250..6440)
                     /gene="yedE"
                     /locus_tag="RJ318_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004295570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HDV7430105.1"
                     /translation="MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMT
                     RWGGEFLELLGMNLDGYSYYQKQNLNGTPLTRTDGIMLIGMFIGCLVAALLANKVKFR
                     LPASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLG
                     VKICNTSFFKPKAKLERVNKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNG
                     NISTQNKQSLLALALIFGFVFGFVISRGQICFTSCFRDLFLFGRDNAIKGALIGMIIA
                     SLIAFAFILQGHTSKLIELSPAVAVGAFLFGFGIVFAGGCECGWTYRAFEGQSHFIIV
                     GIANIIGTMILALSYNFLPKAFKEGIKINLLTEFGNLNGFFINLILFILMFVFVVFYK
                     KHFF"
     gene            6580..6677
                     /locus_tag="RJ318_000198"
     tRNA            6580..6677
                     /locus_tag="RJ318_000198"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6614..6616,aa:Sec,seq:tca)
     gene            6705..7955
                     /locus_tag="RJ318_000199"
     CDS             6705..7955
                     /locus_tag="RJ318_000199"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDV7430106.1"
                     /translation="MSKADIIVGIQWGDEGKGKVVDKLCENYDFVCRSAGGHNAGHTI
                     WVNGVRYALHLMPSGVLHPRCINIIGNGVVVSPEVLIAEMAQFENLKGRLYISDRAHL
                     NLKHHSLIDIAKEKLKGKNAIGTTGKGIGPSYADKINRTGHRVGELLEPQRLCEALIK
                     DFEANKTFFEMLEIEIPSAEELLADLKRFNEILTPYITDTTRMLWKALDEDKRVLLEG
                     AQGSMLDIDHGTYPYVTSSSTISAGTLTGLGLNPKEAGNIIGIVKAYATRVGNGAFPT
                     EDKGEDGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRYTARLNGLDALSLMKLDVLDGF
                     EKIKICRAYEYKGMEIDYIPSDLENVQPIYEEMDGWDKVFGIKDYDLLPENAKKYIAR
                     LEELAGVKVKYISTSPERDDTIIL"
     gene            7952..8380
                     /locus_tag="RJ318_000200"
     CDS             7952..8380
                     /locus_tag="RJ318_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar FliJ family protein"
                     /protein_id="HDV7430107.1"
                     /translation="MKSKYNSVVKVRKQQLDKAESNLNQAKQRQLEHEKAYELSRQEC
                     ESLGVLPKSGSIVELRSNLSMAQVGREALARAKEKVELSKKEMNHYQFLYQKAHLDYE
                     KMKVLEAEEIKQKQKELAKAEEKFLDEIAISRFFKGEKDD"
     gene            8373..8891
                     /locus_tag="RJ318_000201"
     CDS             8373..8891
                     /locus_tag="RJ318_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotE family protein"
                     /protein_id="HDV7430108.1"
                     /translation="MIKKFILLVFISSVVFGAEQDCEQYFEARKAQIELQTREFDEAR
                     QSLEAYKASFEALQKERLENLEKKEAEVNATLAKIEELKLENARLVEEQQKILNSIND
                     KTQGRVKEIYSQMKDAAIADVLSQMDAEDASKIMLSLESRKISGVLSKMDPKKASELT
                     LLLKNLDNNASN"
     gene            8984..9535
                     /locus_tag="RJ318_000202"
     CDS             8984..9535
                     /locus_tag="RJ318_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF507 family protein"
                     /protein_id="HDV7430109.1"
                     /translation="MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEK
                     DILNERKLDERVKELLEQQEDEMELMQVDRKNMFWLVKKKLAPEFNVILDSEDRHNHL
                     AHQILEELVENDYINFIVSENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIP
                     GSEEYDLIFEKLYQEELRKKGMF"
     gene            9535..10653
                     /gene="carA"
                     /locus_tag="RJ318_000203"
     CDS             9535..10653
                     /gene="carA"
                     /locus_tag="RJ318_000203"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDV7430110.1"
                     /translation="MKAYIYLENDIFLSAKAFGKSGTFFGELVFNTSLTGYQEIISDP
                     SYAGQFIVFSMPEIGIVGTNENDNESKEIFASGVLMRELSSSFSNFRAKESLQDYLEK
                     HGKIGIYELDTRYLVKMIRNNGNLRAVISTEISNKEDLKIALEKSAKIDEVNFVKEVS
                     TKKNYSHKQGVWNASFQKFNDAKRSEKKVAVIDYGVKTNILNELVEVGFEVEVYPYNV
                     KADELITLYKKGEIQGVFLSNGPGEPRILKQEIAEIKKLAEAKIPMLGICLGHQLLSN
                     AFGYETYKMKFGQHGANHPVINLDTKTVEITAQNHNYNVPEELAQVAHITHRNLFGDN
                     VEGVRYKDYPIISVQHHPESSSGPHESKYIFKEFMNLM"
     gene            10650..11309
                     /locus_tag="RJ318_000204"
     CDS             10650..11309
                     /locus_tag="RJ318_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDV7430111.1"
                     /translation="MSIDFLAIISVAFLSSFGHCYSMCGGFNLLFINLNSKSNNLFLL
                     TFIYNLFRIFAYIVLGIIFGTFGNILAINAKVQSLSFFILGIFMMILGFALIFRGNML
                     SFIENNVFFDSFVKKIIKKSKNFKGLKSAIFLGFSNGFVPCGLVYFFIANAMSKQNIF
                     EGILVMMIFGISTLPAMLFFSKISQFFSDFLKNLFNYLSYGVIVCYGINLAYIGFKAF
                     Q"
     gene            11306..12517
                     /locus_tag="RJ318_000205"
     CDS             11306..12517
                     /locus_tag="RJ318_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HDV7430112.1"
                     /translation="MKDFFKDQFFKALEKNTIFSRADVQGNLIFVSDKLCQISGYSKK
                     ELIGKKHSIFKHPDVEECYIEELLKKLSYKKPYQVIFKNIDKLGKTFYLETLLIPILD
                     KNNELIEIVAFSHDVSNSFKLNEELALNHAKLRELSINLENTVKNHQQEFIQLGKKFE
                     KKMQIALEKNEKDIKIAYEEILKSSLEQMISDIAHQWRQPLNELGIAMFQMKQNLKDE
                     KGFAEIYSQSKDMIKNMSETIDVFRTLFNKGVEQCVFIKETLNKALEIAFETIEKNHV
                     NINIVSKSDYEVLAYENGLIRVFLNLILNSIEAFKNKKRKIITINFSKFGKNYLKITI
                     KDNAGGIDKENLDKIFQPYFTTKHPSQGIGVGLYISRQIIESFQGKIKVKNGKDGACF
                     EIFLKLKERVE"
     gene            12520..13200
                     /locus_tag="RJ318_000206"
     CDS             12520..13200
                     /locus_tag="RJ318_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV7430113.1"
                     /translation="MSQECKELIILVVEDEVKARESMINILSERFSKVIGAQNGDEGL
                     KKFKKFKPDLVITDIAMPIMDGLDMAREIKEISDDVPIVVLSAYSEKERLLRSIDIGI
                     DKYLIKPVDIEELFKVLDYLIGEKIEANMLVKISEEYQFNKTKRTLIYSGGEIVLTKK
                     ELAFISLLLKQPGALVLHEDIKKNVWIGEHVSDTAVRTFIKRVRDKVGEDFIKNVPSL
                     GYKININK"
     gene            13326..14792
                     /gene="ccoN"
                     /locus_tag="RJ318_000207"
     CDS             13326..14792
                     /gene="ccoN"
                     /locus_tag="RJ318_000207"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HDV7430114.1"
                     /translation="MHPGNVLNYDYTVARYFMFATILFGIVGMAIGTLIAFQMAYPNL
                     NYLAGEYATFSRLRPLHTSGVIFGFMLSGIWATWYYIGQRVLKVSMAESRFLMAVGKL
                     HFWLYMLTMVLAVISLFMGVTTSKEYAELEWPLDILVVLVWVLWGVSIFGLIGIRREK
                     TLYISLWYYIATFLGIAMLYLFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYG
                     HNAVAFVFTVGIIAQIYYFLPKESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTV
                     PDWMQTMGSVFSVVLILPSWGSAINILLTMKGEWSQLRESPLIKFMILASTFYMFSTL
                     EGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRVFKRELYSKSLM
                     EAQFWIQTTGIVLYFASMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIVPYYWIRAI
                     GGLLYLIGFFMFTYNIYKTIACGRVLDKEPKSASPMAA"
     gene            14805..15470
                     /gene="ccoO"
                     /locus_tag="RJ318_000208"
     CDS             14805..15470
                     /gene="ccoO"
                     /locus_tag="RJ318_000208"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HDV7430115.1"
                     /translation="MFSWLEKNPFFFAVAVFVVIAYAGIVEVLPNFAENARPIEGKKP
                     YTVLQLAGRAVYIKDSCNACHSQLIRPFKSETDRYGMYSVSGEFAYDRPFLWGSKRTG
                     PDLARVGNYRTADWHENHMWDPTSVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVF
                     NVPYDAENGTKLGSWEDAQAEVKAEAQAIVDQMKNQEVKDAFAKGEIKEIVALIAYLN
                     SLK"
     gene            15475..15738
                     /locus_tag="RJ318_000209"
     CDS             15475..15738
                     /locus_tag="RJ318_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase, cbb3-type, CcoQ subunit"
                     /protein_id="HDV7430116.1"
                     /translation="MEHLSIVFDVIKNLITFDLATVQKHEWEIFQGYGFFALVMFLSI
                     VLYAYWYHLYRTEKKGERNYENYANLALKDDIDDSVLESKRSA"
     gene            15738..16601
                     /locus_tag="RJ318_000210"
     CDS             15738..16601
                     /locus_tag="RJ318_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDV7430117.1"
                     /translation="MQWLNLEDNVNLLSLIGAILIILITLVIVGRMFKQMKEKKGESE
                     LSEHSWDGIGEYKNAVPTGWAVVFFLTIVWAIWYFLWGYPLNSFSSIGQYNEEVATHN
                     TKFEEKFKNLSPEDKIAMGQNIFLVQCSACHGITGDGINGKAQNLNIWGSEEGIINVI
                     KHGSKGMNFPGGEMLGAADLGVAEEDIPAIAAYVAKDLSAIKKTANENLVAKGKEAYA
                     TCAACHGEDGKGQDGMFPDLTKYGSAAFVVDVLHSGKAGFIGTMPSFPTLNDIQKEAV
                     GEYVISLSRGE"
     gene            16598..16819
                     /locus_tag="RJ318_000211"
     CDS             16598..16819
                     /locus_tag="RJ318_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4006 family protein"
                     /protein_id="HDV7430118.1"
                     /translation="MMENNNRCVFSLSGVTGMLIATVLLLVILAVLTIWGLKAQQEVM
                     QKPYSLKDVQSVKMFGSKEQDHRSIKEAQ"
     gene            16816..16917
                     /locus_tag="RJ318_000212"
     CDS             16816..16917
                     /locus_tag="RJ318_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430119.1"
                     /translation="MSKALEYLIVIGLVAAAAITAWSVLTVNHLHIG"
     gene            16914..17516
                     /locus_tag="RJ318_000213"
     CDS             16914..17516
                     /locus_tag="RJ318_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430120.1"
                     /translation="MKKILQDGFFLAIFFFVLLPSRVFALDAVLFNENILSQKVSNEI
                     NLIGKELYQKSNIFIGVMVGDKTEIETLLNKQKELPQSYILLLLSKNSHKVDIVGSKG
                     ALALIDKEAVLSPYPGTGSILPILATNKGDIYNAAILNGYADIVDRVAKSLGLQLEHS
                     IGNANRDTINILRILIYGFICFALLYYAQRRIKRKKNVRN"
     gene            17503..18024
                     /locus_tag="RJ318_000214"
     CDS             17503..18024
                     /locus_tag="RJ318_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7430121.1"
                     /translation="MLETKKSFWPYGILLSLLAIIIACIVTIFIASHHPVYEDDFYFD
                     SYQNVENNYNQIQKQQVNFDKFFKVNFQNDKITFIGKRKIPSYEVDQNSYVANFKISA
                     LQNINSNDLKVQVLLTRPFTKNFDQKLEGQVKNGILSIALPKLDKGRWELKLKFYANQ
                     ETVGFFSYELNAQ"
     gene            18021..20387
                     /locus_tag="RJ318_000215"
     CDS             18021..20387
                     /locus_tag="RJ318_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HDV7430122.1"
                     /translation="MKLRIFSSSRQIREYYNQKKQQNALLDSAIHIGEFLDKVCLSNF
                     HKASSYESLLLMQEACLKSKDLEKKLGISVEFFAFLKNNEYLFSFFKELSLEKKSIED
                     LKNNDYYATYNEHLEILDEVYKNYLTLLEKNSFYDDLSLPKNYTLNKDFLDEYEAIVY
                     DLQGFLSKFEENLLSEISQIKEVVLSFKTSKFNLEYLLKLDFLKIFDLKINTHYEINL
                     SKQEILKEEIFKTKNSKMKLKSFELRALQCAFVMDEISHFVRKGLKPENIAVITPDES
                     FCEFLRLFDKDNMLNFASGISIKESLFYQKFQALYESASSASFIYKNQEDYFEDTQMI
                     FDYHNTLLHSLKLDFIEFKKYFDEKCDFEYFEKLLALFLENEKQELIYLIRKELYFIK
                     DLLKNQSLTLKELIHLFFMQISQLSLSDVGGGKVTVMGLLESRGLCFDGVILVDFNEE
                     FIPKRSVNELFLNNEVRKKAGLISYDRRENLQRFYYESLMKNALEVSICFVENEEKSK
                     SRFLDELDFDFFYETHIHQKAYLNALKLDYEDIKPNLTPIKAPILKHNPFEFPLSFSR
                     FNLLENQKRTYYYRYILNLAEPRVLSEESKAKNQGNFIHKMLEIYYKNYANNNFDIKV
                     FANLLDKEYQKYNISELDLEVFKLKFIQFAKNEKEHFSKGFYVAHTELELNNILKLGT
                     DSIKLKGTIDRIDSSKEGNLIIDYKSGKVPSNSYQLAFYQALYDENASVGFYDLNSMQ
                     ILHQKAKSLDELRERLKDLVLMSKEEIEFENEQDEYCPYKLIYKKELK"
     gene            20384..23149
                     /locus_tag="RJ318_000216"
     CDS             20384..23149
                     /locus_tag="RJ318_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecB-like helicase"
                     /protein_id="HDV7430123.1"
                     /translation="MSQFEPFLALEASAGSGKTFALSVRFVALILKGARINEILALTF
                     TKKAANEMQKRIIETFLNLEKENKTSECNELCKLLGKDKEELISLRDAKKEEFLRTEL
                     KISTFDAFFGKILRVFALNLGLSSDFTMSEERLDVREIFLKLLKKDELKDLAYYINLV
                     DEKENFFNELEKFYENAYFQNRPKILNPTKAYINKAYSELRSYCLGLTHVKNYKNLCD
                     NFKSEVLDLSVFMQSSFMTKFESTKYLQDLESTNLHFSAKRMELINALNTYAIELENY
                     KIANLMNLLNHYSEAKNIFHKDKNTLNFQDVSKKVYELITSEFKDMIYFRLDGFISHL
                     LIDEFQDTSVIQYQILRPLIAELVSGEGVKKNRTFFYVGDKKQSIYRFRKGKKELFDL
                     LKQEFSQIKSDNLNTNYRSKELLVDFVNETFKEKIKDYKEQFALESKKGGFVRIVESK
                     EQKVKNQAQEIKEKTLETLFEQINFLRSKNISYDDICILCWKNSDADMVLDFLREQNI
                     PAFTQSNVLLENKASVRLVLEYAKYCIFGDEFYLVFLKELLGFEPRKITLDFSKNAME
                     NVLFLIKELKLDLNDIALIQFIEYAKTKENFLKLLFEPCALKIVSEQNMGISIMSVHK
                     SKGLEFDHVILLDSLSKNNSNNEDIMLEYDINQGWQLHIKDKIRELTKEPIYTLFKEN
                     ITRANYEDDINKLYVAFTRAKESLIIIKRNEESVNGNYPSYFKGGFLNIHSQERGFLE
                     SKEQILSVKKESIQTLQKFEKITLQEIQSEERLDSKELYFGNAFHFFMQNLKLPKGEN
                     FQILTQRCKSKFRHFLDESDFEKLFKRIEILLKNIQFQNLIGDGKLLKEQALSFNGEI
                     KQLDLLALKDEEAFIIDYKTGLAMQDKHKEQVGTYKIAISEILQKDKVRAFIVYCLEN
                     EIQILEI"
     gene            23233..23658
                     /gene="rplM"
                     /locus_tag="RJ318_000217"
     CDS             23233..23658
                     /gene="rplM"
                     /locus_tag="RJ318_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDV7430124.1"
                     /translation="MTKITKPNEVKREWIVLDAEGKRFGRLLTEVATILRGKNKPCFT
                     PNVDCGDYVIIINASKAVFTGANKAEDKLYHRHSGYFGSVKSEKFGDLLEKNPAKLYK
                     LAVRGMLPKTNLGRAMLKKLKIYAGSEHPHTAQIAKEGK"
     gene            23661..24050
                     /gene="rpsI"
                     /locus_tag="RJ318_000218"
     CDS             23661..24050
                     /gene="rpsI"
                     /locus_tag="RJ318_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDV7430125.1"
                     /translation="MATTYATGKRKTAIAKVWVKPGSGKISVNGVDLNTWLGGHEAIK
                     LKVVQPLLVTKQETSMDIKATTLGGGYSAQAEALRHGISRALAAMDADFRALLKPKGL
                     LTRDSRTVERKKYGRRKARRSPQFSKR"
     gene            24175..25134
                     /gene="cadF"
                     /locus_tag="RJ318_000219"
     CDS             24175..25134
                     /gene="cadF"
                     /locus_tag="RJ318_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin-binding outer membrane protein CadF"
                     /protein_id="HDV7430126.1"
                     /translation="MKKIFLCLGLASVLFGADNNVKFEITPTLNYNYFEGNLDMDNRY
                     APGIRLGYHFDDFWLDQLEFGLEHYSDVKYTNTNKTTDITRTYLSAIKGIDVGEKFYF
                     YGLAGGGYEDFSNAAYDNKSGGFGHYGAGVKFRLSDSLALRLETRDQINFNHANHNWV
                     STLGISFGFGGKKEKAVEEVADTRATPQAKCPVEPREGALLDENGCEKTISLEGHFGF
                     DKTTINPTFQEKIKEIAKVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANEL
                     EKYGVEKSRIKTVGYGQDNPRSSNDTKEGRADNRRVDAKFILR"
     gene            25134..25775
                     /locus_tag="RJ318_000220"
     CDS             25134..25775
                     /locus_tag="RJ318_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDV7430127.1"
                     /translation="MNKTILFDLDGTLIDSTDAILNSFQGAFKALGLTSKNNEEIKNL
                     IGYPLEQMFRMLYPDKVNLSKEFVLAYREIYAQIYLEQTTLLPKAKEALELGSEIADL
                     GIVTTKGGKFTPILLDYLGVKKFFKTLITLEDVTNPKPSSEPIILALKGLNKTQENAY
                     MIGDTILDIQAAISANITPLALTCGYGNENELKAHSMVFLNAYEAVNYIARLN"
     gene            25868..29428
                     /gene="nifJ"
                     /locus_tag="RJ318_000221"
     CDS             25868..29428
                     /gene="nifJ"
                     /locus_tag="RJ318_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HDV7430128.1"
                     /translation="MGKIMKTMDGNEAAAYAAYAFTEVAGIYPITPSSPMADYTDMWA
                     AAGKKNLFGVPVKIVEMQSEAGAAGSVHGSLQAGALTTTYTASQGLLLKIPNMYKIAG
                     QLLPCVIHVAARSLAAQALSIFGDHQDIYAARQIGFAMLCSHSVQETMDLAGVAHLAA
                     IKGRVPFLHFFDGFRTSHEIQKVEVMDYAHFDRLLDREALLEFRNNALNPENPKTRGT
                     AQNDDIYFQTREVSNRFYDALPDVVNEYMQEISKITGREYKPFTYYGHKEPECVIVAM
                     GSVTQALEEVVDYLNAKGEKVGILKVYLYRPFSLKYFFDVMPKSVKKIAVLDRTKEPG
                     SLGEPLYLDVKSAFYGRENAPVIVGGRYGLSSKDVDPAQMIAVFENLKLDNPKDGFTV
                     GIIDDVTHTSLSTGEKISLGDESTIECLFYGLGADGTVGANKNSIKIIGDKTDFYAQA
                     YFAYDSKKSGGYTRSHLRFSKKPIRSTYLVSTPHFIACSVAAYLEIYDVLAGIRKGGT
                     FLLNSIWNAEETIRQLPDAVKKTLAEKEVNFYIINATKLARDIGLGNRTNTIMQSAFF
                     KLAKIIPYEDAQKYMKELAYKSYSKKGDAIVEMNYKAIDVGADGLVKVEVDPNWKNLE
                     LKEKEQTNAYKGTEFVEKIVKPMNAAKGDDLPVSAFLGYEDGSFEHGTTEYEKRGVGV
                     MVPRWIEANCIQCNQCASVCPHAVIRPFLINDEEMANAPRGVKDHALEAKGTKGEKLS
                     FKIQVSPLDCTGCELCVHECPTKEKSLVMVPLQEEMDFGEQENADYLFKEITYKDDIL
                     NKETTKGAQFAQPLFEFHGACPGCGETPYITLITRLFGERMIVANATGCSSIYGGSAP
                     STPYRKSVKNGHGPAWGNSLFEDNAEFGLGMKIATENTRHRIEHIMNESMQEVPNALS
                     ALFKDWIANKDNGAMSVEIKDKMIPILEQNKNIKAVQDILELKQYLSKKSHWIFGGDG
                     WAYDIGYGGLDHVLASGENVNILVLDTEVYSNTGGQSSKSSRTGAVAQFAAAGKPIQK
                     KDLGQIAMTYGYIFVAQVNSTANYTHLIKAITAAEAYDGPSLVICYSPCIAHGIKGGL
                     GYSGEQGELATKCGYWPLYTFDPRLEEQGKNPLTLTGKEPDWDLYEQFLMNEVRYNSL
                     KKANPEHAAELFERNKKDAQRRYRQLKRIAMADYSNEVES"
     gene            29452..29769
                     /locus_tag="RJ318_000222"
     CDS             29452..29769
                     /locus_tag="RJ318_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HDV7430129.1"
                     /translation="MCFSTLFAQDNFEEYFKLIDKENRINFNTLQNPFVNPTFEKLRH
                     IKITAIMLDKVKIYDRWYKKGDMIDDAIIYEINTKEIKFQYDNLEIAIQINKNDKINI
                     NIN"
     gene            29741..31159
                     /gene="mshL"
                     /locus_tag="RJ318_000223"
     CDS             29741..31159
                     /gene="mshL"
                     /locus_tag="RJ318_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus (MSHA type) biogenesis protein MshL"
                     /protein_id="HDV7430130.1"
                     /translation="MIRLILILINILFCHYLYALDCQKRLFDISINEKLSIQESLDEL
                     AKYCSFSIIVKDKIAKEKLETLQNSVNIHQMSLDEIFNFFIKEHDLSYDFDGKILRIS
                     GINTKIFKISYITSIREGQSITKASVDAKPRQSEYSGSFDDAEDNMIKSMEKFDFWQN
                     IEKEIIVLLKNSHEDYEAKTPIINPNAGLIIVTGTNSQLKSVKNYLQKLENRLKKQVI
                     IDVSILAVSLNESHSSGINWQNFNIGLNSQVNNENSFIQFQNGQGFVKNLGLRANLNF
                     DSIINFLSQNGKTSVLSNPKLMALNNQQAIISVGDTINYQVKESSKGTENGTTVSESY
                     NNYSIFVGILLNILPEISDDGKIMLRINPSLSDFKYPEDNKRQKEPRTIAPDTIQKKL
                     SSVVQVENNQTLILGGLISHDKSNEKNSINFLSKIPILGSLFKGEVLNSKATEIVFII
                     TPSIVDSVNAPSLKDLGFKHYE"
     gene            31152..31760
                     /locus_tag="RJ318_000224"
     CDS             31152..31760
                     /locus_tag="RJ318_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7430131.1"
                     /translation="MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLA
                     KKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILDEVGMYDYAMLESIRIYSDSISF
                     VLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
                     QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR"
BASE COUNT        11451 a         3810 c         5823 g        10698 t
ORIGIN      
        1 gatacgaaat gatacaaaaa gctttagcct tagctgaaga attacaagga caaatagaag
       61 ccaatatttc aaattctgaa aaagaatttc atgctaaaat gcaaaaactt cttaataatc
      121 ccaaaaataa agttatgctt atagagcttt tagatcgttc ttttagatgt aaagataaaa
      181 atgcaagttt tgagcttata gaatatactt tgagtaaata tggcatagcg gattttttta
      241 gcacttttga aaaattccta ctttttagct ttttaaattt tggcaaattt gctcctaatt
      301 taagtgtacc tttttttgtc aaacatttaa gagaagatac taaagctatg gttctagatg
      361 caaatcctag tgttttagaa ccacatatta agaaaagaaa agagcaagat aaaattacct
      421 taaatgtgaa tttaatcggc gaagaggttt taggtgaagc tgagagtaaa tatcgtatgc
      481 aaaaatacga agaagcctta aaatcaagct atatcactta tatttccata aaaattacta
      541 ctattttttc acaaattaat attatagatt ttaattattc taaagaagag gtcgtaaaaa
      601 gactagatta tctttatgct ttagccttag aagaagagaa aaaacaaggt gtatctaaat
      661 ttatcaatct tgatatggaa gaatttaggg atttagagct caccgttgca gcttttatgg
      721 aaagtgtggc taaatttgat attaaagcag ggattgtttt gcaagcttat attcctgatt
      781 cttataagta tcttaaaaaa ctttttgctt tttcaaaaga gagggtttta aaaggtatga
      841 agcctattaa gatccgtttt gttaagggtg ctaatatgga aagtgaagaa accattgcgt
      901 ctcaaagggg ttgggagctt cctacttttt acaaaaaaat agatactgat agtaattata
      961 ataaaatgct tgattttatt cttgaaggag ataattataa atacatcaac ataggaattg
     1021 caagtcataa tatctttgag attgcttatg cttatacacg cataagtgaa gtgggtgctt
     1081 tggattcttt tacttttgaa atgcttgaag gtatgagttt gcaatgttct tatgaattat
     1141 ctaaaatgca tgatctaatc ctttatgccc cagtttgcga tgaagcacat tttaacaatg
     1201 ccattgctta tcttgtaaga cgccttgatg aaaatacaag tgaagataat tttatgcgtt
     1261 attttttcaa tcttaaagta ggagataaga actggaatat ccaaaaagaa ctttttttaa
     1321 aatctttaga aggcataaaa actcttgata atactacaca tcgtaagcaa gatagaaata
     1381 aagaatcaaa tatcataagt tcttatgaag gtaaaaaatt tagcaatgaa agcgatacgg
     1441 attttatttt agcacaaaat agagtgtggg ctaaagaaat taaaactaaa tatgaaaatt
     1501 taaaagatta tgatgtttat cctgttatag gcgaacttga ttttaaagca gaaaatttaa
     1561 atgttttaga agttaaagat aagatcgaag atagagttat aggaaaggct tatttagcag
     1621 gagaaaaaga aatcaaacaa gctttagaag tagctaaaaa ttccaaattt acacaaaaaa
     1681 gtcatgatga aatttatcaa attttagcca aaagtgcaaa actgatgaga gaaagaagag
     1741 gggatttgat aggtttggca gctttagaag tgggcaaaac ctttttagag atcgatcctg
     1801 aagtaagcga ggctattgat tttatagagt tttatccgca ctctttagaa gagcttaaaa
     1861 aacaaaatcc aaaagttaca ttcacaccta aaggtatagg ggttaccata gctccttgga
     1921 attttcctat aggaatttca gtaggtacta tagctgcacc actagccgca ggtaatgtgg
     1981 tgatttacaa accttcttca ctttcaactc taacaggtta tatgctttgt aagtgttttt
     2041 gggattcggg tattccaaaa gatgctttga ttttcttacc ttcaaaagga agtgatattt
     2101 ctaaatattt acttattgat gaagcgatta aattttcaat tcttacagga ggagaggata
     2161 ctgcttatgc catgttaaaa gctaatccaa ccttgctttt aagtgctgaa actggcggaa
     2221 agaatgcgac tatagtttct aaatttgctg atcgtgatag tgcgattaaa aatatcattc
     2281 attctgcttt tagcaatagc ggtcaaaaat gttcagctac ttctttgcta gtcttagaag
     2341 aagaggttta tcatgatgaa gaatttaaaa agactttagt ggatgctgcg agttctatgg
     2401 cagtgggcaa tccttttgaa tttaaaaata aattaggtac tttagctgat aagccaagtt
     2461 ctaaagttca aaaggcctta gatgaattac aaccttatga agaatgggca ttaaaaccta
     2521 agtttttaga ggataatcct tatttgatga ctccaggcat aaaatatggc actaaaaagg
     2581 gtgattttac tcatatgaat gaactttttg taccgatttt aagtgtgatg aaggctaaag
     2641 acttaaaaga agctattgat atagtaaatt ccacaggtta tggtttaact gcaggttttg
     2701 aaagcttaga tgaaagagaa tgggagtatt ttcacactca catagaagca ggaaatattt
     2761 atatcaataa accaaccaca ggggctatag tgctgcgtca accttttggt gggattaaaa
     2821 aatcagctat aggtttgggt agaaaagtgg gaatttataa ttatatcact caatttttag
     2881 agattaagca agaagatttt gatgatcatt taattgaaga taaattttca aaaaaattag
     2941 cacaaataga tttaaaagaa gcacaagatt ttataaacaa tttaattaaa atgtctcaat
     3001 cttatgctta tcattataaa aacgagttta gtgtttcaaa agattatgtc aatattcgtg
     3061 gagaagataa tcttttttct tatactaaaa taaagaatat ggttttaaga ctttgtggaa
     3121 atgaaagctt aaaagatgtt ttaggtgtgg ttttaggtgc aaatattgca aatattgatc
     3181 taagtatcag ttatgatgaa caagatgtta gtatgataga acgaattgtt caaagcatag
     3241 gagcaaaagt attgttttta aaagaaaata aagaaaattt tatcaagagt attaaagaat
     3301 atgaaagagt gcgttattta gcaaagccag atgtaaatga tgagatttat aaagaggctg
     3361 caaagcttgc taaaatcatt ataagagaaa agccattatt aaatggtcgt tttgaacttt
     3421 taaattattt taatgaaaaa gctttaagta tatcttttca tcgttatgga aatttaggca
     3481 ttagagcaat atcttaatga tcaaggagag attgatggaa gtggttcaaa ttaatacccc
     3541 aatagcagtg atgtttgtag tgtatgcctt attaatgctt tatataggtt tttattttta
     3601 taagcaaaat aaaaattcag aggattattt tctaggtggg cgtactatgg ggcctgtgat
     3661 atctgcactt agcgcagggg cttctgatat gagtggttgg cttttaatgg gtttaccagg
     3721 agctttatat gtaagtggtt ttatagattc ttatattgca attgggctta ctataggagc
     3781 tagtttaaat tggatttttg tggcaaaaag acttagaatt tataccagtg tgattgcaaa
     3841 ttctttgact attcctgatt attttgaaac tcgttttgat gatgataaac atatactgcg
     3901 cattgtatgt gcggtggtaa ttttgatatt ttttaccttt tatgtttcat cagggcttgt
     3961 aagcggagca aaactttttg aaagtacttt tggtatcaga tacgattatg ctttaactac
     4021 tggaacgatt attattgttg cttatacttt tttaggtgga tataaggcgg tttgttggac
     4081 ggatatgata caagggcttt taatgatgat ggctttaatt attgtacctt tggttatgct
     4141 ttatcattta ggtggttttg gtgaagcgat gaatatagta agagaaataa agccacaagc
     4201 tttatctatg ggcgaaggag taggaattgt aagcattata tctgcacttg cttggggttt
     4261 gggttatttt ggtcaaccac atattttagt gcgttttatg tcgattcgtt ctactaaaga
     4321 tattcctatg gccactttta taggtattgc ttggatggcg gtttgtcttt taagtgcttg
     4381 tatgataggt attttaggta tagcttatgt gcataaattt gaattaagtt tgcaagatcc
     4441 tgaaaagatt ttcatcgtga tgtcgcagct tttatttaat ccttggatag caggtatttt
     4501 actcagtgct attttagcgg ctattatgag tacggcaagt tcacaattgc tggtttcaag
     4561 ttctactata gcggaagatt tttataaaaa gatttttaga gaagatgcac caagtcatat
     4621 tgtattaaat ttaggtaaat taggtgtttt attggtagct gtaatagcgt ttttgatttc
     4681 tactgataaa aactcaagtg ttttgagtat agtttcttat gcatgggctg gatttggagc
     4741 ttcttttggt tctgtaatgc ttttttcttt attttggagt aggatgacaa gagtaggagc
     4801 gatcttaggt atgataacag gagctgctac tgtggtgctt tggaagaatt ttgcaaattc
     4861 aggtctttat gaaatagttc cagggttttt agtagcttcg gtggtgatta ttattgcaag
     4921 tttgtttaca aatgtaagat ttggaactaa ggcagcttat gaaaagatgt taaaagagct
     4981 ttgagaataa aagccttttt taaggctttt ggattaaaaa tcttagtgtg ggtccacttt
     5041 gatcgatttc aagcacttta aaaccacggt tttttgcatc ttgaggtatg gaattgatac
     5101 tttgtggaca atcacaaagt acttctaaaa tttctccact tttaagctta ggtaagacat
     5161 caagtgttgc tatagcagga taaggacaag cttcaccttg taaatttaaa ctataagtaa
     5221 ttttcactgt ttatccttta agttgatttt taaaaaaagt gttttttgta aaatactaca
     5281 aaaacaaaca ttaagatgaa taaaataagg ttgataaaaa atccatttaa attgccaaat
     5341 tcagttaaaa gattgatttt tataccttct ttaaaagctt ttggtaaaaa gttataactt
     5401 aaagctaaaa tcatagttcc tattatattt gcaattccta ctattataaa atgactttgt
     5461 ccttcaaagg cacgataagt ccaaccacac tcgcaacctc cggcaaaaac tataccaaaa
     5521 ccaaacaaaa atgctcccac agctacagca ggagaaagtt ctatgagttt gctagtatga
     5581 ccttgcaaga taaaagcaaa agcgattaaa gaggcgataa tcataccgat taatgcgcct
     5641 tttatagcat tatctctacc aaataaaaat aaatctctaa agcaagaagt aaaacaaatt
     5701 tgccctctag aaataacaaa gccaaaaaca aaaccaaaaa tcagtgctaa agctagaaga
     5761 ctttgtttgt tttgtgtgct gatattgcca tttgtaaaaa caagataaaa cacccaaact
     5821 aaaaaggcta tgaaaagcaa tatgcctaag ttaaaatata attttgtacg caaactttgc
     5881 ttgtttaacg gcaagttttc tttatttaca cgttctaatt tagctttagg tttaaaaaag
     5941 gaagtgttgc aaattttcac tcctagataa attcctaaaa ccataaaaac agtaaaaagc
     6001 caagtgtgta aagaaaaata aggtaaacct gtaaaaaaat tagctaaatt gcatccaaat
     6061 gcaagtcttg ctccatatcc tgaaagaatt ccacctacta ttgcttgaaa aattcttata
     6121 ttgctagcag gtagacgaaa tttgactttg ttagctaaaa gtgcggctac taaacaacct
     6181 ataaacatac ctatgagcat aataccatca gttcttgtta aaggggttcc atttaaattt
     6241 tgcttttggt aataagaata tccatctaaa ttcataccta aaagctctaa aaactcgcca
     6301 ccccaacgtg tcatttctcc agtaacagcc caaacgccac caaaaatccc aaaatacact
     6361 gcacttaaaa ttccaagtgc aatcatagaa cgggaattgt cccaaaaatt gattaaatat
     6421 ttttgtttaa aagaattcaa agaaagatcc taaaaatgta atcatcaaaa cttgatgcta
     6481 aaaaagagtg agattatagc ttaaatttaa tatgaagtca aaaagaatat tgataaattt
     6541 attttgtttt tcattaaaaa tcgctataat tatcactttg gaagattagc gtatctggtg
     6601 atcgccactg acttcaaatc agatgaaagg atagttgact attctttggg gagttcgatt
     6661 ctctcatctt ctcgccaata ttaagtaaaa tcaaggaaat ttttatgagc aaagcagata
     6721 ttattgtcgg cattcaatgg ggcgatgaag gaaaaggtaa ggtagttgat aaattatgtg
     6781 aaaattatga ttttgtttgc agaagtgcag gtggacacaa tgcaggacat acgatttggg
     6841 taaatggtgt aagatatgcg cttcatctta tgccaagtgg agttttgcat ccaagatgta
     6901 ttaatattat cggaaatgga gttgtggttt ctcctgaagt attgattgct gaaatggctc
     6961 aatttgaaaa tttaaaaggt agattatata tcagcgatag agctcattta aatttaaaac
     7021 atcattcttt aatagacatt gcaaaagaaa agctcaaagg caaaaatgcc ataggaacaa
     7081 caggtaaggg tataggacct tcttatgcag ataagattaa tcgtacagga catagagttg
     7141 gagagctttt agaaccacaa agactttgcg aggctttgat aaaagatttt gaagctaata
     7201 aaactttttt tgaaatgctt gaaattgaaa ttccaagtgc tgaagaattg cttgctgatt
     7261 taaaacgttt taatgaaatt ttaactcctt atattacaga tactacaaga atgctttgga
     7321 aggctttaga tgaagataaa agagtacttt tagaaggagc tcagggttct atgcttgata
     7381 ttgatcatgg aacttatcct tatgttacaa gttcaagtac tatttcagca ggcactttaa
     7441 caggacttgg gttaaatcct aaagaagcgg gaaatattat aggtattgta aaagcttatg
     7501 caacgcgtgt gggaaatgga gcttttccta ctgaggataa gggcgaagat ggagaaaaaa
     7561 ttgcgcaaat tggaaaagag attggcgtaa gcacgggacg caaaagacgc tgtggatggt
     7621 ttgatgcggt tgctgtaaga tatacagcaa ggcttaatgg tcttgatgct ttatctttga
     7681 tgaagcttga tgttttagat ggttttgaaa agataaaaat ttgtcgtgct tatgaatata
     7741 agggtatgga aatcgactat ataccaagtg atttagaaaa tgttcaacct atttatgaag
     7801 aaatggatgg ttgggataaa gtttttggta taaaagatta tgatttattg ccagaaaatg
     7861 ctaaaaaata tatagcaaga cttgaagagc ttgcaggggt taaggtaaag tatatttcta
     7921 ctagccctga aagagatgat actatcatct tatgaaaagt aaatataatt ctgttgtaaa
     7981 ggtaagaaaa caacaacttg ataaagcaga atcaaatctt aatcaagcca aacaaagaca
     8041 gcttgaacat gaaaaagctt atgaactttc acgccaagag tgtgaaagtt taggcgtatt
     8101 gccaaaatca ggatctatag tagagttaag atcgaattta agtatggcac aagtaggacg
     8161 cgaggctttg gcaagagcta aggagaaagt agaactttct aaaaaagaaa tgaatcatta
     8221 tcagttttta tatcaaaaag cacatttaga ttatgaaaaa atgaaggttt tagaagccga
     8281 ggaaattaaa caaaagcaaa aagaacttgc caaggctgaa gaaaaatttt tagatgaaat
     8341 tgcaatcagt cgttttttca aaggagaaaa agatgattaa aaaatttata ttgttagttt
     8401 ttatttcaag tgtagttttt ggagctgaac aagattgtga gcagtatttt gaagctagaa
     8461 aagctcaaat tgaattgcaa actagagaat ttgatgaagc aagacaatct ttagaagctt
     8521 ataaagcctc ttttgaagct ttgcaaaaag aaaggcttga aaatttagaa aaaaaagagg
     8581 ctgaggttaa tgcaactttg gcaaaaattg aagaattaaa gcttgaaaac gcaaggcttg
     8641 tagaagaaca acaaaagatt ttaaattcaa tcaatgataa aacacaaggt agggttaaag
     8701 aaatttattc ccaaatgaaa gatgcagcca ttgcagatgt tttaagtcaa atggatgcag
     8761 aggatgcaag caaaataatg ctttctttgg aatcgcgtaa aatttcaggt gttttatcta
     8821 aaatggatcc aaaaaaagct agcgagctta ctttgctttt gaaaaattta gataataatg
     8881 ctagtaatta ggtgattaaa ataatgaaaa tttttcattt ttaacattct tttaccaaaa
     8941 ataagctatt atttcaaaca ttatcaaata aaaggttttt aagatgcgta taaaattacc
     9001 acatattcct tatatcgcaa ataaaatgat gttagatata gctaattctt cttttgtaga
     9061 aattaaagat caattagaaa agcttaaggt atgtataata gaagttttag agaaagatat
     9121 tctaaatgaa agaaaattag atgaaagagt aaaagagctt ttagagcaac aagaagatga
     9181 aatggagctt atgcaagtag atcgtaaaaa tatgttttgg cttgtgaaga aaaagttagc
     9241 tcctgaattt aatgtgattt tagattctga agatagacat aatcatctag cgcatcaaat
     9301 tttagaagaa cttgtagaga atgattatat taattttata gtgagtgaaa atagagttaa
     9361 aaatttaatc ttttcaagca tagagtctta tcttaaaatt tatgaaaaac ttgaagatga
     9421 ggtttatgag aaaattagca attataaaac aaaacctatt ccaggtagcg aagaatacga
     9481 tcttatcttt gaaaaactct atcaagaaga gcttagaaaa aaaggtatgt tttaatgaag
     9541 gcttatattt atttagaaaa tgatattttt ttaagtgcta aggcttttgg aaagagcggt
     9601 actttttttg gagagcttgt atttaacact tctttaacag ggtatcaaga aattatttca
     9661 gatccttctt atgcagggca atttatcgta ttttccatgc cagaaattgg tatagtggga
     9721 accaatgaaa atgataatga aagcaaggaa atttttgcaa gtggtgtttt aatgcgtgaa
     9781 ttaagttcca gtttttcaaa ttttcgcgct aaagaaagtc tgcaagatta tcttgaaaaa
     9841 catggaaaaa taggaattta tgaacttgat acgagatatc tagtaaaaat gataagaaat
     9901 aatggcaatt taagagctgt aatttcaact gaaatttcaa ataaagaaga tttaaaaatc
     9961 gccttagaaa aatcagcaaa aattgatgaa gtaaattttg taaaagaagt tagcactaag
    10021 aaaaattatt ctcataaaca aggcgtttgg aacgctagtt ttcaaaaatt taatgatgct
    10081 aaaagaagtg agaaaaaagt tgctgttata gattatggtg ttaaaacaaa tatcttaaat
    10141 gaacttgtag aagtaggttt tgaagtagaa gtttatccat ataatgttaa agcagatgag
    10201 ttgattactc tgtataaaaa aggtgaaatt caaggcgtgt ttctttctaa tggtccaggt
    10261 gagccaagga ttttaaaaca agagattgca gagattaaaa aacttgcaga agctaaaatt
    10321 cctatgcttg gaatttgctt aggtcaccag cttttaagta atgcttttgg atatgaaact
    10381 tataaaatga aatttggaca acatggagca aatcatcctg tgatcaatct tgatacaaaa
    10441 acggtagaaa ttaccgcaca aaatcataat tataatgttc cagaagaatt agctcaagtg
    10501 gctcatatca ctcatagaaa tttatttggc gataatgttg aaggagtaag atataaagac
    10561 tatcctatta tttcagtgca acatcatcca gaaagttctt caggtcctca tgaaagtaag
    10621 tatattttta aagaatttat gaatttgatg tgagtataga ttttttagct attatcagcg
    10681 ttgctttttt atctagtttt ggacactgct attctatgtg tggtggtttt aatttacttt
    10741 ttataaattt gaattcaaaa agcaataatt tatttttatt aacttttatt tataatttgt
    10801 ttagaatttt tgcttatatt gttttaggga taatttttgg gacttttggg aatatcttgg
    10861 caatcaatgc caaggttcaa agtttgtcat tttttattct tggtatattt atgatgattt
    10921 tgggttttgc tcttattttt agaggtaata tgttatcttt tattgaaaat aatgtttttt
    10981 ttgatagttt tgtaaagaaa attattaaaa aatctaaaaa ttttaaagga ttaaaatcag
    11041 ccatattttt aggattttca aatggttttg ttccttgtgg attggtgtat ttttttatag
    11101 ccaatgcaat gagtaagcaa aatatttttg aaggtatttt ggtaatgatg atttttggaa
    11161 tatcaacttt acctgcgatg ttattttttt ctaaaatttc acagtttttt agtgattttt
    11221 tgaaaaattt atttaattat ttatcgtatg gcgttattgt ttgttacggt ataaatcttg
    11281 cctatatagg ttttaaggct tttcaatgaa agattttttt aaagatcagt tttttaaagc
    11341 tcttgaaaaa aatacaattt tttcaagagc tgatgttcaa ggaaatttaa tttttgtcag
    11401 tgataagctt tgtcaaataa gtggatatag taaaaaagag cttataggaa aaaaacattc
    11461 aatatttaaa catccagatg ttgaggaatg ttatattgaa gaacttttaa aaaaactttc
    11521 atataaaaaa ccttatcaag ttatttttaa aaatattgat aaattaggca aaactttcta
    11581 tcttgaaact ttattaatcc ccatattgga taaaaataat gaattaatag aaatagtagc
    11641 attctctcat gatgttagta attcttttaa gcttaatgaa gagcttgctc taaatcacgc
    11701 taaattaaga gaattaagta ttaatcttga aaatacagtt aaaaatcacc aacaagaatt
    11761 tatacagtta ggtaaaaaat ttgagaaaaa aatgcaaatt gccttggaaa aaaatgaaaa
    11821 agatattaaa atagcatatg aagagatttt gaaatcttca ttagaacaaa tgattagcga
    11881 tatagcacat caatggagac aaccgttaaa tgagctcggt attgccatgt ttcaaatgaa
    11941 gcaaaatctt aaagatgaaa aaggatttgc tgaaatttac tcacaatcaa aagatatgat
    12001 taaaaatatg tcagaaacaa ttgatgtgtt tagaactttg tttaacaaag gagtagagca
    12061 gtgtgtattt ataaaagaga ctttaaataa agccttggaa attgcttttg aaactataga
    12121 aaaaaatcat gtaaatatta atattgtttc gaaaagtgat tatgaagttt tggcatatga
    12181 gaatggttta ataagagttt ttcttaattt gattttaaat tcaatagaag catttaaaaa
    12241 caaaaaaagg aaaatcataa caataaattt ttcaaaattt ggaaaaaatt atctgaaaat
    12301 tacaataaaa gataatgctg gtgggattga taaagaaaat ttagataaaa tttttcaacc
    12361 ttattttaca acaaaacatc ctagtcaagg tataggagta ggactttata taagtagaca
    12421 aattatcgaa agtttccaag gaaaaataaa agttaaaaat ggaaaagacg gggcttgttt
    12481 tgagatattt ttaaaactaa aagagagggt agagtagaaa tgtcacaaga atgtaaagaa
    12541 ttgataatat tagtagttga agatgaggtt aaggctagag aatcaatgat taatatatta
    12601 agcgaacgct ttagtaaagt aatcggagct caaaatggag atgaggggct taaaaaattt
    12661 aaaaaattta agccagattt agttatcaca gatattgcta tgcctattat ggatggactg
    12721 gatatggcaa gagagattaa agaaatttca gatgatgtcc caattgttgt tcttagtgcg
    12781 tattcagaga aagagagact tttgcgttct attgatattg gtatagataa atatttgatt
    12841 aaacctgttg atatagaaga gttgtttaaa gttttagatt atctgatagg tgaaaaaatt
    12901 gaagcaaata tgcttgtaaa aatttctgaa gaatatcaat ttaacaaaac taaacgaact
    12961 ttaatttaca gtggtggaga aattgtttta actaaaaaag aattggcttt tatttctttg
    13021 cttttaaagc aacctggagc tttggttttg catgaagata ttaagaaaaa tgtttggata
    13081 ggtgaacatg tgagcgatac tgctgttaga acttttataa aaagagtaag agataaagtg
    13141 ggtgaagatt ttataaaaaa tgtgccaagt ttaggttata agataaatat caataaataa
    13201 gactgattta gccttaaaat ataaaacata acaaatgatt aacaaaatta tcatttttaa
    13261 gaaaaaatgt ataattaata ttctataata ttctcttgtt atcaaaaatt ttaaggagaa
    13321 agtcgatgca tccaggtaat gtattaaatt acgactatac ggttgcaaga tattttatgt
    13381 ttgcgaccat attgtttggc attgttggta tggctatagg aactcttata gcttttcaaa
    13441 tggcatatcc taatttaaat tatttagcag gagaatatgc cactttttca agacttagac
    13501 cacttcatac ttcaggtgtg atttttggtt ttatgctttc agggatttgg gcaacttggt
    13561 attatatagg tcagcgtgtt cttaaagtga gtatggctga gtcaagattt ttaatggctg
    13621 ttggtaagct tcatttttgg ctttatatgc ttactatggt tttagctgtt atatctttgt
    13681 ttatgggtgt gactacatct aaagaatatg cagagcttga gtggccttta gatattcttg
    13741 ttgttcttgt ttgggtttta tggggtgtaa gtatttttgg acttattgga attcgccgtg
    13801 aaaaaaccct ttatatttct ctatggtatt atatagctac atttttaggt atagctatgc
    13861 tttatctttt taacaacatg gaagtaccaa cttattttgt tactggaatg ggtaaatggt
    13921 ggcatagtgt atcaatgtat gcaggaacaa atgatgcttt agtacaatgg tggtatggac
    13981 ataatgctgt ggcatttgta tttactgtgg gtattattgc tcaaatttat tacttcttgc
    14041 caaaagaaag tggtcagccg attttctctt ataaactctc tttatttgca ttttggggct
    14101 taatgtttgt ttatctttgg gcaggtggtc accatttgat ttattcaact gtacctgatt
    14161 ggatgcaaac tatgggttcg gttttctctg tagtattgat tttaccttct tggggttcag
    14221 cgattaatat cttgcttact atgaaaggtg agtggagtca gcttcgcgag agtccgttga
    14281 ttaaatttat gattttggca tcaactttct atatgttctc aacacttgaa gggccaattc
    14341 tttcaattaa atctgttaat gctttagcac actttacaga ttggattcca ggacatgttc
    14401 atgatggaac attaggttgg gtaggattta tgactatggc tgcgctttat catatgactc
    14461 ctagagtttt caaaagagag ctttatagca aatctttaat ggaagctcaa ttttggatcc
    14521 aaaccacagg tatagttctt tattttgctt caatgtggat tgcgggtatt actcaaggta
    14581 tgatgtggag agcgacagat gagtatggta acttgcttta tagctttatt gatactgttg
    14641 tggctattgt tccttattat tggattagag cgattggtgg attgttgtat cttatcggtt
    14701 tctttatgtt tacttataat atttacaaaa caattgcttg tggaagagtg cttgataaag
    14761 aaccaaaaag cgcttcgcct atggcagcat aaaaaggaga aaatatgttt agttggttag
    14821 aaaaaaatcc attctttttt gctgtagctg tttttgtagt gattgcttat gcaggcatag
    14881 ttgaagtttt accaaatttt gcagaaaatg caagaccaat tgaaggtaaa aaaccttata
    14941 cggttttaca acttgcaggg cgtgcagtat atattaaaga tagttgtaat gcttgtcatt
    15001 cacagcttat tcgtccattt aaatcagaaa cagatcgtta tggtatgtat tctgtaagtg
    15061 gtgaatttgc ttatgataga ccttttcttt ggggctcaaa aagaacagga cctgatcttg
    15121 ctcgtgtagg aaattataga acggctgatt ggcatgaaaa tcatatgtgg gatcctactt
    15181 ctgttgttcc agattctatt atgccttcat ataagcatat gtttaaaaat aatgcagata
    15241 ttgaaactgc ttatgctgag gctttaactg tgaaaaaagt tttcaatgtt ccttatgatg
    15301 cagaaaatgg aacaaaactt ggttcttggg aggatgcaca agctgaagta aaagctgaag
    15361 ctcaggctat agttgatcaa atgaaaaatc aagaagtaaa agatgctttt gctaaaggtg
    15421 aaatcaaaga aatagttgct ttgatcgctt atttaaatag cttaaagtaa gatgatggaa
    15481 catttatcaa tagtttttga tgtgattaaa aatttaatca catttgattt agcaacagtt
    15541 caaaaacatg agtgggagat tttccaaggt tatggttttt ttgcactcgt gatgtttttg
    15601 tcaatagtat tatatgcgta ttggtatcat ttatatagaa cagaaaaaaa aggcgagaga
    15661 aattatgaaa attatgcaaa ccttgcctta aaagatgata ttgatgatag tgtattagaa
    15721 agtaaaagga gtgcttaatg caatggttaa atttagaaga taatgttaat ctcttatctt
    15781 taattggagc tattcttatc attttaatca cactagttat tgtgggtaga atgtttaagc
    15841 aaatgaaaga aaaaaaaggc gagtcagagc ttagtgaaca tagttgggat ggaataggag
    15901 agtataaaaa tgctgttcct actggttggg ctgtggtatt tttcctgact attgtttggg
    15961 ctatttggta ttttctatgg ggatatcctt taaattcttt ttcaagtata ggtcaatata
    16021 atgaagaagt agcaactcat aatacaaaat ttgaagaaaa atttaaaaat ttatctcctg
    16081 aagataaaat agcaatgggt caaaatatct ttttagttca gtgttcggct tgtcatggaa
    16141 ttacaggaga tggtatcaat ggtaaagctc aaaatttaaa tatttggggt agtgaagaag
    16201 gtataatcaa tgtaattaaa catggttcaa aaggtatgaa ttttccaggt ggagaaatgc
    16261 ttggtgctgc tgatttaggt gtagcagaag aagatatccc tgctattgct gcttatgtag
    16321 caaaagatct ttcagctatt aagaaaactg caaatgaaaa tttagtagca aaaggtaaag
    16381 aagcttatgc aacttgtgca gcatgccatg gagaagatgg aaaaggtcaa gatggaatgt
    16441 tcccagatct tacaaaatac ggttctgcag cttttgtagt agatgtttta catagtggta
    16501 aggctggttt tataggaaca atgccgagtt ttccaacact taatgatatt caaaaagaag
    16561 ctgttggcga gtatgtaatt tctctttcaa ggggtgaatg atggaaaata ataatagatg
    16621 cgtgttttct ctttcaggtg ttacaggtat gttaattgct acggttttgt tgcttgttat
    16681 cttagcagtt ttaactattt ggggtcttaa agctcagcaa gaagtgatgc aaaagccata
    16741 tagtcttaaa gatgtacaaa gtgtaaagat gtttggttca aaagaacaag atcatagaag
    16801 tataaaggaa gcacaatgag taaggctttg gaatatttaa ttgttattgg tttagttgct
    16861 gctgctgcaa tcaccgcttg gtcggttttg accgtaaatc atcttcatat aggatgaaaa
    16921 aaatattaca agatggcttt tttttagcta tcttcttctt tgttttattg ccttctaggg
    16981 tttttgctct tgatgctgta ctttttaatg aaaatatttt aagtcaaaaa gtaagtaacg
    17041 agattaatct tataggaaaa gagctttacc aaaaaagtaa tatttttatc ggcgttatgg
    17101 ttggtgataa aactgaaatt gaaactttat taaataaaca aaaagaactt cctcaatctt
    17161 atatattgct tcttttgtca aaaaattctc acaaagttga tatagtgggc tcaaaaggtg
    17221 ctttagcttt gattgataaa gaagctgtgc ttagtcctta tcctggaaca ggatctattt
    17281 tgccgatatt agctacaaat aaaggtgata tttataatgc tgctatactt aatggttatg
    17341 cagatattgt agatcgtgtg gcaaaatcct tgggattaca attagaacat tctataggta
    17401 atgcaaatcg tgatactatc aatattttaa gaatacttat ctatggattt atttgctttg
    17461 cattgttata ctatgcacaa agaagaataa agaggaaaaa aaatgttaga aactaaaaaa
    17521 agtttttggc cttatggtat tttgctttca cttttggcta taattattgc ttgtattgta
    17581 acgattttta tagcaagtca ccatcctgtg tatgaggatg atttttattt tgactcttat
    17641 caaaatgttg aaaataatta caatcaaata caaaaacaac aagtaaattt tgataaattt
    17701 tttaaagtaa attttcaaaa tgataaaatc acttttatag gtaaaagaaa aattcctagt
    17761 tatgaagtgg atcaaaattc ctatgttgca aattttaaaa tttctgcatt acaaaatata
    17821 aattctaatg atttaaaagt tcaagttctt cttacaagac cattcactaa aaattttgat
    17881 caaaagttag aaggacaagt taaaaatgga attttaagta tcgctttacc taaattagat
    17941 aaaggtagat gggagcttaa gctaaagttt tatgcaaatc aagaaacagt gggttttttt
    18001 agctacgaat taaatgctca atgaaattaa gaatttttag ctcttcaagg caaattagag
    18061 aatattataa tcaaaaaaaa cagcaaaatg ctttattaga tagtgctatt catataggtg
    18121 aatttttaga taaagtttgt ttgagcaatt ttcataaggc aagttcttat gaaagcttac
    18181 ttttaatgca agaagcttgt ctaaaaagta aggatttaga aaaaaaacta ggaatttcgg
    18241 tagaattttt tgcttttttg aaaaataacg aatatctttt ttcttttttc aaagaactta
    18301 gtttagaaaa aaaaagtata gaagatctta aaaataatga ttattatgct acctataatg
    18361 aacatttgga aattttagat gaggtatata agaattatct tactttgctt gaaaagaatt
    18421 ctttttatga tgatctttct ttgcctaaaa attacactct taataaagat tttttagatg
    18481 agtatgaagc tatagtttat gatttgcaag gttttttgag taaatttgaa gaaaatttat
    18541 taagtgaaat ttctcagatt aaagaagtgg ttttaagttt taaaacaagt aaatttaatc
    18601 ttgaatatct tttaaaactt gattttttaa aaatatttga tttaaaaata aacactcatt
    18661 atgaaatcaa tctttcaaaa caagagatct taaaagaaga aatttttaaa acaaaaaatt
    18721 caaaaatgaa actcaaatct tttgaattaa gggctttgca atgtgctttt gttatggatg
    18781 aaatttcaca ttttgtacgc aaaggtttaa agcctgaaaa tattgcagtt ataactccag
    18841 atgaaagttt ttgtgagttt ttaagacttt ttgataaaga caatatgctt aactttgcaa
    18901 gtggaattag tattaaagag agtttgtttt atcaaaaatt tcaagcactt tatgaaagtg
    18961 ctagtagtgc ttcttttatt tataaaaatc aagaggatta ttttgaagac acgcagatga
    19021 tttttgatta tcacaatacg cttttacatt ctttaaaact tgattttata gagtttaaaa
    19081 agtattttga tgagaaatgt gattttgaat attttgaaaa attacttgct ttgtttttag
    19141 aaaatgaaaa gcaagagctt atttatttga tacgaaaaga actttatttt attaaagatt
    19201 tattgaaaaa tcagtcttta actcttaaag agttgatcca tctttttttc atgcaaattt
    19261 cacaactttc ccttagtgat gtaggtggag gtaaggttac ggtaatggga cttttagaaa
    19321 gtcgtgggct ttgttttgat ggagtgattt tggttgattt taatgaagaa tttattccta
    19381 aaagaagtgt taatgagctt tttttaaaca atgaagtgcg taaaaaagca ggattgatta
    19441 gctatgatag aagagaaaat ttacaaagat tttattatga aagcttgatg aagaatgctt
    19501 tagaagtaag tatttgcttt gtggaaaatg aagaaaaaag caaatcacgt tttttagatg
    19561 aacttgattt tgactttttt tatgaaactc atatccacca aaaagcttat cttaatgctt
    19621 taaaattaga ctatgaagac ataaaaccta atctaactcc tataaaagct cctattttaa
    19681 agcataatcc tttcgagttt ccgctttctt ttagtcgttt taatttattg gaaaatcaaa
    19741 aaagaactta ttattatcgt tatattttaa atttagcaga acctagggtt ttaagcgagg
    19801 aaagcaaagc gaaaaatcaa ggaaatttta tccataaaat gcttgaaatt tattataaaa
    19861 attatgcaaa taataatttt gatataaaag tttttgcaaa tttattggat aaagaatatc
    19921 aaaaatacaa tatcagcgaa cttgatcttg aagtatttaa attaaaattt atacaatttg
    19981 ctaaaaatga aaaagagcat ttttcaaaag gcttttatgt cgcacataca gagcttgagt
    20041 taaacaatat tttaaagctc ggaacagata gtataaaact taagggtact atagatcgta
    20101 tcgatagttc aaaagaaggt aatttgatta ttgattataa aagtggaaaa gtgccaagta
    20161 attcttatca acttgctttt taccaagctt tatatgatga aaatgcaagc gtgggttttt
    20221 atgatttaaa tagtatgcaa atattgcatc aaaaagccaa aagtttagat gagctaagag
    20281 aaagacttaa agatttagtt cttatgagta aggaagaaat agagtttgaa aatgaacaag
    20341 atgagtattg tccttataaa ctcatttata aaaaggaatt aaaatgagtc aatttgagcc
    20401 ttttttagca ttagaagcga gtgcaggaag cggaaaaacc tttgccctga gtgtgcgttt
    20461 tgtagcactt attttaaaag gagctaggat taatgaaatt ttagctttga cttttaccaa
    20521 aaaagctgct aatgaaatgc aaaaaagaat tattgagact tttttaaact tagaaaaaga
    20581 aaataaaacc agtgaatgca atgaactttg caagctttta ggtaaagata aagaagagct
    20641 tatttcttta agagatgcta aaaaagaaga atttttaaga acagagttaa aaatcagtac
    20701 ttttgatgct tttttcggaa aaattttgcg tgtttttgct ttaaatttgg gcttaagtag
    20761 tgattttaca atgagtgaag agaggcttga tgtaagagag atttttttaa aacttcttaa
    20821 aaaagatgaa ttaaaagatt tggcttatta tattaattta gttgatgaga aagaaaattt
    20881 ttttaacgag cttgaaaaat tttatgagaa tgcttatttt caaaatcgtc ctaaaattct
    20941 aaatccaact aaagcttata tcaataaagc ttatagtgag ttaagaagtt attgtttggg
    21001 tcttactcat gtaaaaaatt ataaaaattt gtgtgacaat ttcaaaagtg aagttttaga
    21061 tttatccgtg tttatgcaat caagttttat gacaaaattt gaaagtacaa aatatttaca
    21121 agatttagaa agtactaacc tgcattttag tgcaaaaaga atggagctta taaatgcttt
    21181 aaatacctat gccatagagc ttgaaaatta taaaattgct aatttaatga atcttttaaa
    21241 tcattatagt gaagctaaaa atatatttca taaagataaa aataccttaa atttccaaga
    21301 tgtgagtaaa aaagtttatg agttaataac cagtgaattt aaggatatga tttattttcg
    21361 tttagatggt tttatttcgc atttgcttat tgatgaattt caagatacaa gcgtgatcca
    21421 atatcaaatt ttacgccctt tgatcgctga gcttgtttca ggagaagggg ttaagaaaaa
    21481 tcgcactttt ttttatgtag gagataaaaa acaaagtatt tatcgctttc gtaaaggaaa
    21541 aaaagaatta tttgatttgt taaaacaaga atttagtcaa attaaaagtg ataatttaaa
    21601 tactaattat cgttctaaag agcttttggt tgattttgtt aatgaaactt ttaaagaaaa
    21661 aatcaaagat tataaagaac aatttgcctt agaaagtaaa aaaggcggtt ttgtgcgtat
    21721 tgtggagtct aaggaacaaa aggttaaaaa ccaagcccaa gaaattaagg aaaagacttt
    21781 agaaacttta tttgagcaaa ttaatttttt aagatctaaa aatatttctt atgatgatat
    21841 ttgtattttg tgttggaaaa atagtgatgc agatatggtt ttggattttt taagagagca
    21901 aaatattcct gcatttactc aaagcaatgt tttacttgaa aataaagcaa gtgtaagact
    21961 tgttttagaa tatgctaaat attgtatttt tggtgatgag ttttacttgg tatttttaaa
    22021 ggaactttta ggttttgagc cgagaaaaat tacccttgat ttttcaaaaa atgctatgga
    22081 aaatgtactt tttttaataa aagaattaaa acttgattta aatgatatcg ctttaataca
    22141 atttatcgaa tatgctaaaa ctaaggagaa ttttttaaag cttttatttg agccttgtgc
    22201 tttgaaaata gtaagcgaac aaaatatggg aattagtatt atgagtgtgc ataaatctaa
    22261 gggtttggaa tttgatcatg tgattttact tgatagttta tctaaaaaca attcaaacaa
    22321 tgaagatatc atgcttgaat atgatatcaa tcaaggttgg caactccata ttaaagataa
    22381 aattcgagag cttactaaag agcctattta tactcttttt aaagaaaata ttacaagagc
    22441 aaattatgaa gatgatatta ataaacttta tgtggctttt acaagagcta aggaaagttt
    22501 gatcatcata aaaagaaatg aagaaagtgt aaatggaaat tatccaagtt attttaaggg
    22561 gggattttta aatatacatt ctcaagagag aggtttttta gaaagcaaag aacaaatttt
    22621 aagcgttaaa aaagaaagca ttcaaacttt gcaaaaattt gaaaaaatta ccttgcaaga
    22681 aattcaaagt gaagaaaggc ttgatagtaa agaactatat tttggaaatg cttttcactt
    22741 ttttatgcaa aatttaaaac ttcctaaggg tgaaaatttt caaatactta ctcaaagatg
    22801 caagagtaaa tttagacatt ttttagatga gagtgatttt gaaaagcttt ttaaaagaat
    22861 tgaaatttta cttaaaaata ttcaatttca aaatttgatt ggtgatggaa agcttttaaa
    22921 agaacaagct ttgagtttta atggagaaat taaacaatta gacttgcttg ctttaaaaga
    22981 tgaagaagct tttataattg attataaaac aggtcttgct atgcaagata aacataaaga
    23041 gcaggtagga acttataaga tcgccattag tgaaattttg caaaaagata aagtgcgtgc
    23101 ttttatagtt tattgtttgg aaaatgaaat tcaaattttg gaaatataaa cttaattttt
    23161 acttaaatta agtaaaaatt aatattattt tttatacaat cacattttaa atttttggca
    23221 aaggtaaaaa ttatgacaaa gataacaaag ccaaacgaag taaaacgaga atggattgtt
    23281 ttagacgcag aaggcaaacg ctttggtcgt cttttaactg aagtagcaac aattttgaga
    23341 ggtaaaaaca aaccttgctt tactccaaat gttgattgtg gtgattatgt aattatcatc
    23401 aatgcttcaa aagctgtatt tacaggtgct aataaagcag aagataagct ttatcataga
    23461 cattcaggat attttggaag tgtaaaaagc gaaaaatttg gtgatttact tgaaaaaaat
    23521 cctgcaaaat tatataaatt agcagttaga ggtatgcttc ctaaaacaaa tttgggcaga
    23581 gctatgctta aaaaattaaa aatctatgcg ggtagtgagc acccacacac tgcacaaatt
    23641 gctaaagaag gaaaataatc atggcaacaa catacgcaac aggtaagaga aaaactgcta
    23701 tcgcaaaggt atgggtaaaa ccaggtagtg gtaaaattag tgttaatggt gttgatttaa
    23761 acacttggct tggtggacac gaggcgatta agcttaaagt ggttcaacct ttacttgtga
    23821 ctaaacaaga aacttcaatg gatattaaag caactacttt aggcgggggc tatagtgctc
    23881 aagctgaagc tttaagacat ggaatttcaa gagctttagc agctatggat gctgatttta
    23941 gagccttatt aaaacctaaa ggacttctta ctagagatag tagaactgtt gagcgtaaaa
    24001 aatatggacg ccgcaaagca agaagaagcc cacaattctc taaacgttaa tatttttggt
    24061 gggattttcc cacctttcta caatttttta taaaactcat ccttttttct atcatttatg
    24121 ttataattgc aaaatttaaa tttttatttt ataacacaat gaaaggtttt ttctatgaaa
    24181 aaaatattct tatgtttagg tttggcaagt gttttatttg gtgctgataa caatgtaaaa
    24241 tttgaaatca ctccaacttt aaactataat tactttgaag gtaatttaga tatggataat
    24301 cgttatgcac cagggattag acttggttat cattttgacg atttttggct tgatcaatta
    24361 gaatttgggt tagagcatta ttctgatgtt aaatatacaa atacaaataa aactacagat
    24421 attacaagaa cttatttgag tgctattaaa ggtattgatg taggtgagaa attttatttc
    24481 tatggtttag caggtggagg atatgaggat ttttcaaatg ctgcttatga taataaaagc
    24541 ggtggatttg gacattatgg cgcgggtgta aaattccgtc ttagtgattc tttggcttta
    24601 agacttgaaa ctagagatca aattaatttc aatcatgcaa accataattg ggtttcaact
    24661 ttaggtatta gttttggttt tggtggcaaa aaggaaaaag ctgtagaaga agttgctgat
    24721 actcgtgcaa ctccacaagc aaaatgtcct gttgaaccaa gagaaggtgc tttgttagat
    24781 gaaaatggtt gcgaaaaaac tatttctttg gaaggtcatt ttggttttga taaaactact
    24841 ataaatccaa cttttcaaga aaaaatcaaa gaaattgcaa aagttttaga tgaaaatgaa
    24901 agatatgata ctattcttga aggacataca gataatatcg gttcaagagc ttataatcaa
    24961 aagctttctg aaagacgtgc taaaagtgtt gctaatgaac ttgaaaaata tggtgtagaa
    25021 aaaagtcgca tcaaaacagt aggttatggt caagataatc ctcgctcaag caatgacact
    25081 aaagaaggta gagcggataa tagaagagtg gatgctaaat ttattttaag ataatgaata
    25141 aaactatttt atttgattta gatggcactt taattgattc tactgatgct attttaaatt
    25201 ctttccaagg agcttttaaa gcccttggat taacttctaa aaataatgaa gaaatcaaaa
    25261 atctcatagg ttatccttta gagcaaatgt ttagaatgct ttatccagat aaagtaaatt
    25321 taagtaaaga atttgtatta gcttatcgtg aaatttatgc acaaatttat ttagaacaaa
    25381 ccactctttt gcctaaagca aaagaagcat tagaacttgg aagcgaaatt gcagatcttg
    25441 gtatagttac aacaaaagga ggtaaattta ctccgattct gcttgattat ttgggagtta
    25501 aaaaattctt taaaacttta attactcttg aagatgtcac aaatccaaag ccaagttccg
    25561 aacctataat tttagcctta aaaggactca ataaaactca agaaaatgcc tatatgatag
    25621 gcgatacaat attagatatt caagctgcaa tttctgctaa tatcactcct ttggccttaa
    25681 cttgtggcta tggcaatgaa aatgaattaa aagctcattc tatggtattt ttaaatgcat
    25741 atgaggctgt taattatata gctagattaa actaatttca agttttcgtt aaacgccttt
    25801 taagagaatt tatagtaaat tgatagttaa aaaattataa aaattatcaa tataaaggaa
    25861 ggtctcaatg ggtaaaatta tgaaaactat ggacggaaat gaggctgctg catacgctgc
    25921 gtatgctttt actgaagttg ctggaattta tcctattaca cctagttctc ctatggctga
    25981 ttataccgat atgtgggcag ctgcaggaaa aaaaaatctt tttggagttc ctgtaaaaat
    26041 cgtagaaatg caaagtgaag caggagctgc aggtagtgtg catggatctt tacaagctgg
    26101 ggctttgact acaacttata cggcttctca aggattactc cttaaaattc caaatatgta
    26161 taaaatagca ggtcaattac tcccctgtgt aatccatgta gcagcgcgtt ctttggctgc
    26221 tcaagctttg tctatctttg gtgatcatca agatatttat gcagcaagac aaattggttt
    26281 tgctatgctt tgttcgcatt ctgtgcaaga aaccatggac ttagctggtg tagcacattt
    26341 agctgcaatt aagggaagag tgccattttt acattttttt gatggtttta gaacaagcca
    26401 tgaaattcaa aaagttgaag taatggatta tgcgcatttt gatagattat tagatagaga
    26461 agctttgctt gaatttagaa ataatgcttt aaatccagaa aatccaaaaa cacgtggaac
    26521 agcacaaaat gatgatattt attttcaaac tagagaagta agcaatcgtt tttacgatgc
    26581 tttacctgat gttgttaatg aatatatgca agaaatttca aaaattacag gtagagaata
    26641 caaaccattt acttattatg gtcacaaaga gccagagtgt gtgattgttg ctatgggttc
    26701 tgtaactcaa gcacttgaag aagtggtgga ctatcttaat gccaagggtg aaaaggtagg
    26761 gattttaaaa gtttatcttt atcgcccatt tagtttaaaa tatttctttg atgttatgcc
    26821 aaaatcagtg aaaaaaatcg cggttttaga tagaaccaaa gaaccaggaa gtctcggaga
    26881 accactttat cttgatgtaa aatcagcttt ctatggaaga gaaaatgctc ctgttatagt
    26941 gggtggaaga tacggacttt cttcaaagga tgttgatcct gctcaaatga tagcagtatt
    27001 tgaaaatctt aaacttgata atccaaaaga tggctttact gtaggtataa ttgatgatgt
    27061 aactcatact tcactgagta ctggagagaa aatttcactt ggagatgaaa gtacgatcga
    27121 atgtttattt tacggacttg gtgctgatgg aactgtgggt gcaaataaaa actcgattaa
    27181 aatcatcgga gataaaacgg atttttacgc tcaagcttat tttgcttatg attctaaaaa
    27241 atcagggggt tatacaagaa gccatttaag attttctaaa aaacctatcc gttcaactta
    27301 tcttgtttca actccgcatt ttatcgcttg ttcggtagcg gcttatttgg aaatttatga
    27361 tgttttagca ggaattcgca aaggaggaac tttcctttta aatagtattt ggaatgctga
    27421 agaaaccata agacaacttc cagatgcagt aaagaaaact ttagctgaaa aagaagtaaa
    27481 tttttatatc atcaatgcaa ccaaactagc tcgtgatata ggtttgggaa atcgtacaaa
    27541 taccattatg caatcagcct ttttcaaact tgcaaaaatc attccttatg aagacgcaca
    27601 aaaatacatg aaagagcttg cgtataaatc ttatagtaaa aaaggcgatg ctattgtaga
    27661 aatgaattac aaggctattg atgtgggtgc tgatggactt gtaaaagttg aagtggatcc
    27721 aaattggaaa aatttagagc ttaaagaaaa agaacaaacc aatgcctata aaggtactga
    27781 atttgttgaa aaaatcgtaa aacctatgaa tgcggctaag ggtgatgatt tacctgtttc
    27841 agccttttta ggttatgaag atggaagttt tgaacacggc acaaccgaat acgaaaaacg
    27901 cggtgttggg gttatggtac caagatggat agaggcaaat tgtattcaat gcaatcaatg
    27961 tgcttcagtt tgtccgcatg ctgttatcag gccatttttg attaatgatg aagaaatggc
    28021 aaatgcacct cgcggtgtaa aagatcatgc tttagaagct aaaggaacca aaggagaaaa
    28081 attaagcttt aaaattcaag tttctccact tgattgtaca ggctgtgagc tttgtgttca
    28141 tgagtgtcct actaaagaaa aatctttggt tatggtacca cttcaagaag agatggattt
    28201 tggtgagcaa gaaaatgcgg attatttatt taaagaaatt acttataaag atgatatttt
    28261 aaataaagaa accacaaaag gagcgcaatt tgcccaacct ttatttgaat tccatggggc
    28321 atgtcctgga tgtggggaaa ctccttatat tactttaatt acaagattgt tcggtgaaag
    28381 aatgattgtg gctaatgcta caggttgtag ttctatttat gggggttcag ctccatcaac
    28441 tccttataga aaaagtgtga aaaatggaca cggtcctgct tggggaaatt cactttttga
    28501 agacaatgct gagtttggtt tgggtatgaa aattgcaact gaaaatacaa gacaccgcat
    28561 tgaacatatc atgaatgaaa gtatgcaaga agttccaaat gctttatcag ctctttttaa
    28621 agattggatt gcaaataaag acaatggtgc tatgtctgtg gaaattaaag ataaaatgat
    28681 ccctatttta gagcaaaata aaaatattaa agctgtacaa gatatattag agcttaaaca
    28741 gtatttaagt aaaaaatctc actggatttt tggtggtgat ggttgggctt atgatatagg
    28801 ctatggcgga cttgatcatg ttttagcaag tggagaaaat gtaaatattt tagtgcttga
    28861 tacagaagtt tattctaata caggcggtca aagttcaaaa tcttctagaa caggagctgt
    28921 agcacagttt gcagcagcag gcaaacctat acagaaaaaa gatctaggtc aaattgctat
    28981 gacttatggt tatatttttg tagcacaagt aaattcaacg gcaaattata ctcatcttat
    29041 caaagctatc actgcagctg aggcctatga tggaccatct ttggtgattt gttattctcc
    29101 ttgtatagct catggtatta aaggtgggct gggttactca ggagagcaag gtgagcttgc
    29161 tacaaaatgt ggttattggc cactttatac ctttgatcct cgtttagaag agcaaggaaa
    29221 aaatccttta actctaacag gaaaagaacc tgattgggat ttatatgagc aatttttgat
    29281 gaatgaagtg cgttataatt cacttaaaaa agcaaatcct gaacacgctg ctgagctttt
    29341 tgaacgcaat aaaaaagacg ctcaacgtcg ctatagacag cttaagcgta ttgctatggc
    29401 tgattatagc aatgaggtcg aaagctgata aaatatattt ttagtgctac attgtgtttt
    29461 agcactttgt ttgcacaaga taattttgaa gagtatttta aacttataga taaagaaaat
    29521 cgtataaatt ttaatactct tcaaaaccca tttgtgaatc ctacttttga aaaattaaga
    29581 catattaaaa ttactgcaat tatgcttgat aaagtaaaaa tttatgatcg atggtataaa
    29641 aaaggtgata tgattgatga tgctataata tatgaaataa atactaaaga gattaaattc
    29701 caatatgata atttagaaat tgcaatccaa ataaataaaa atgataagat taatattaat
    29761 attaattaac attctttttt gccattatct ttatgcttta gattgtcaaa agcgtctttt
    29821 tgatatcagt attaacgaaa aattaagcat acaagaaagt cttgatgagc ttgcaaaata
    29881 ttgttctttc agtattattg ttaaagataa aattgccaaa gaaaaattag aaacattgca
    29941 aaactctgtc aatattcatc aaatgagttt ggacgaaatt tttaattttt ttatcaaaga
    30001 gcatgatctt agctatgatt ttgatggtaa aattttaaga atttcaggca ttaatacgaa
    30061 gatttttaag ataagttata tcacttctat cagagaagga caaagcataa ctaaagcgtc
    30121 tgtagacgct aaaccaaggc aaagtgaata tagcggtagt tttgatgatg cagaagacaa
    30181 catgattaaa agtatggaaa aatttgattt ttggcaaaat atagaaaaag agattattgt
    30241 attattaaaa aattctcatg aagattatga ggctaaaact cccattataa atcccaatgc
    30301 aggtcttatt atagtaactg gaacaaattc tcagttaaaa agtgtgaaaa attatttgca
    30361 aaaactagaa aatcgtctta aaaaacaagt tattatcgat gttagcatac ttgctgtgag
    30421 tttaaatgaa agccattcta gtgggattaa ttggcaaaat tttaatatag gtttaaattc
    30481 acaagtaaat aatgaaaatt cttttattca gtttcaaaat gggcaaggtt ttgttaagaa
    30541 tttgggttta agggcgaatt taaattttga ttctattatt aactttcttt ctcaaaatgg
    30601 aaaaactagc gtgctttcta atccaaagct tatggcttta aataaccaac aagccattat
    30661 ttctgtaggc gatactataa attatcaagt taaagaaagt tctaaaggta ctgaaaatgg
    30721 gactactgtt agtgaaagtt ataataatta ttctattttt gtaggcattt tactcaatat
    30781 cttgcctgaa atttctgatg atggaaaaat aatgcttagg attaatccaa gcttaagtga
    30841 ttttaagtat ccagaagata ataaacgaca aaaagaacca agaactattg ctcctgatac
    30901 catacaaaaa aagctttcta gtgttgtgca agtagagaat aatcaaactt taattttagg
    30961 cggattgatt tctcacgata aatctaatga gaaaaattct atcaattttc tatcaaaaat
    31021 tccaatccta ggttctttgt ttaaaggaga agttttaaat tctaaagcaa ccgaaatcgt
    31081 ttttattatc actccaagta tagtagatag cgtaaatgct ccaagtctta aagatctagg
    31141 atttaagcat tatgagtaaa attattccat ttagagaaga aatttttcat caaatcaatc
    31201 aaattttaga aagccaaaaa gcttttattt ttttatgggg aaaaagtggt agtggtaaaa
    31261 gtgtattgtt gcaaagattg gcaaaaaaat ataatgttga ttttattaat gaaaatttta
    31321 aagatcagag tttcttaaaa gaaaaaattg agtttttgat ttcacaaggt cagagtttaa
    31381 tcattcttga tgaagtggga atgtatgatt atgcaatgct agaaagcatc aggatttata
    31441 gtgattctat aagttttgtt ttaagttctc ataaaaagtt aaatatactt aaaaaagagc
    31501 attttaaaag tcgtttaagt gcttgtttta aattgaaaaa tattagtctt ttagaacttg
    31561 atgattatat taaattgaaa tttggaatga atttttcaaa taaatgtctt aagtttttac
    31621 aaaaaatttc tcaaggaaat ttaagatata ttgataaaac tttaaaaagt ttttatgaga
    31681 taaatagttt ttttgataaa aacaaaagtc aagagtatat tttaaagctt agtgctttag
    31741 agaatggctt attaaggtaa gatatgcaag aaagaattaa ag
//
LOCUS       DAPIYB010000006        30630 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.006, whole genome shotgun sequence.
ACCESSION   DAPIYB010000006 DAPIYB010000000
VERSION     DAPIYB010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 30630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30630
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.006"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(25..1062)
                     /locus_tag="RJ318_000225"
     CDS             complement(25..1062)
                     /locus_tag="RJ318_000225"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005021248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II asparaginase"
                     /protein_id="HDV7430132.1"
                     /translation="MKKLFICCLFIGVCMKKAKSRIAILGTGGTIAGFIDSTIATTGY
                     TAGAIDIDVLIKAVPQIRDLADISWEQIANIDSSNMCDEIWLRLAKKIAKLFAEGIDG
                     VVITHGTDTMEETAYFLNLTIKSDKPVVLVGAMRPSTAISADGPKNLYNAVALVANKE
                     AKNKGVMVAINDKILSARGVVKTHSLNVDAFSSPDFGDLGYIVDGKVFFYNNVTKAHT
                     KNAPFDVSKLTSLPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGSIHKNQKD
                     VLKELLKKGLKVVVSSRVVAGCVAVSDSDEKLGFISAEDLNPQKARVLLILALTKTSD
                     PKKIQEYFLKY"
     gene            complement(1116..2687)
                     /gene="recJ"
                     /locus_tag="RJ318_000226"
     CDS             complement(1116..2687)
                     /gene="recJ"
                     /locus_tag="RJ318_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDV7430133.1"
                     /translation="MKIINKNEIKKILASRFEKDLHTKLCDLPLPCCLKDAYKAANRI
                     KEAVEKNEKVAIVGDYDVDGIISCVIMAEFFDDIGFDYIIRIPNRFKDGYGLNAEIIN
                     ELDVNLIITVDNGIAALEAAKLCKEKNIDLIITDHHMPQDVLPDAFAIINPKQKDCDF
                     PEIEICGAQVAWYLIAALKEVCKLKYDMCKFLELLAIAIVADMMELRDLNRALVRRGI
                     DHINKSKRAAFRAIKHYYQKDKFALDNIGFLIAPLINSAGRMDDASISYEFLHTKDFN
                     KALEYLEQIVSFNESRKDEEKQLFEDSLNQIDENDSCIVVSGLNWHEGVLGIVASRLA
                     KHFNKPAFVFSQNEEHLKGSARSVGKIDILALISKTNSILSNYGGHKGAAGISLNSEN
                     FEQFKNKIKKECSQISESEFLDTDEILGILEPSEIDFEMLEILESFEPFGHKNPRPFF
                     VLENLCVKNKKLLGKDEKHLKLVLTKENKTIEALFFNFDKEPELNQNISLLGSISKNE
                     FRGMVTPQFVVKEIL"
     gene            complement(2674..4305)
                     /locus_tag="RJ318_000227"
     CDS             complement(2674..4305)
                     /locus_tag="RJ318_000227"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HDV7430134.1"
                     /translation="MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKADP
                     YINVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYQSVIE
                     KERRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRA
                     LRLEVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALD
                     RDLKDKIAISCGVEKNCVIESVDAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMEN
                     WDSLVKRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAALDTKVELKWVDSEKL
                     ENMESSEVFKDVSGILVAGGFGYRGVEGKIKAIQYARENKIPFLGICLGMQLALVEFA
                     RNVLKLKDANSSEFNEKCQNPVVYLIDEFMDTNGEKQIRTAKTPLGGTMRLGAYKCDI
                     KEKSLLAKVYNEVKSVKERHRHRYEANPKYRADFEKHGLIVSGESKGLIEAVELNCHP
                     FFLAVQFHPEFTSRLEHVNPVICSFIKAAINYEDN"
     gene            4425..5048
                     /locus_tag="RJ318_000228"
     CDS             4425..5048
                     /locus_tag="RJ318_000228"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HDV7430135.1"
                     /translation="MQITLLFHTPLSVCSHATRTCWQSFEKGDCGGEKDKELIDRVGN
                     KFKHASTLEHLNYTFYIQGISRACLQEVARHRHTSPSVKSTRYTLKELRNEAEFKIGD
                     FENASRYLVLCGNEEVDNASIKALENLRTILQKSISLDIAKYCLPESYKTELTLTINA
                     RSLQNFISLRSSKSALWEIRNLANALFEALPQEHKFIFEHCLHKDIE"
     gene            5168..6553
                     /locus_tag="RJ318_000229"
     CDS             5168..6553
                     /locus_tag="RJ318_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HDV7430136.1"
                     /translation="MDKQFFQDFLMLSQAHTITTLAMLCVVFYALKKMRDIKINFSLR
                     MLFALLMGLGFGFALQYLANFPDAKEASNILWYSETKHWFAFVSSVFVAFIKMLVVPL
                     VSICIIKVIIEIDKNIKISSLLGISLFWILFSTAIAAILGIFLGYSFDLGSNFAIYEG
                     NKQIREIQTFSNIILGLIPSNIIAAINKENIIAIVIFSFFIGISAKKISKKEEYEQAF
                     KSFHNFILTFYNIMMNMTATVIRFMPYAVVCMMANVLLSNGFEAIKTAGLFIMLIYIA
                     MLIMFGVHFLLLASQGLNPIKYAKKAFPVWLFAFSSRSSLGTLPMTTSTLQNKFGVNS
                     AIANFVASIGTTTGLNGCAGYFPALAAVFVAFATHTHIDFTFALMIVLVAVIGSLGIA
                     GVPGSATMAASIMLAGIGFGNNFVMLSLILAIDPIIDMARTASNVSGAMTSALCTAKN
                     LKALDKEIYNS"
     gene            complement(6592..8961)
                     /locus_tag="RJ318_000230"
     CDS             complement(6592..8961)
                     /locus_tag="RJ318_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDV7430137.1"
                     /translation="MKVIKRNGRTEELDVSKIKKCTSDAVKDLEGVNLSELELDAKIQ
                     FRDGISTEEIQKTLIKTAVDKIDIDCPNWTFVAARLFLFDLYKKVNGMNRYNHLREYF
                     EKGEKEGRILLGLKEKYDLDDLNAYIKPERDMQFTYLGIKTLYDRYLIKDSKGMPIEL
                     PQQMFMAIAMFLAQNEFNPQEWAKKFYDLISKFELMLATPTLSNARTTRHQLSSCYIG
                     STPDNIEGIFDSYQEMALLSKFGGGIGWDWSKVRAMGGSIDGHKNAAGGIIPFLKITN
                     DIAVAVDQLGTRKGAIAVYIEPWHMDISDFIDLRKNSGEERRRAHELFPALWINDLFM
                     KRVRANDKWTLFDPADTADLCDLYGEAFEKRYEEYEKDESITKEIVEAKELWKKILLN
                     YFETGLPFLCFKDSANRANPNAHVGIIRSSNLCTEIFQNTEPNYYQIKVVFENGDELH
                     FDEEQKVVIDGGYEKPAKKISTLDSIDGNKVYIVEKYKNDGKTAVCNLASINLSKVYT
                     KEDIERVVPTAIRMLDNVIDLNFYPHRKVKDTNLKSRAIGLGVMGEAQMLAEAKIYWG
                     SDEHLNKIDEIMEQISFEAINASSNLALEKGSYEDFEGSNWSKGIFPIDVASPKAKAL
                     TLREGLFDQSECDWVKLREKVKKDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKW
                     FEQNLSGMIPVVVPNLSLDTWQYYTPAYELDQKILVKAAAVRGKWIDQGQSLNIFLSL
                     DKASGGYLNEIYQLAWELGVKSTYYLRSESPDSEKVNVADRSIECEGCQ"
     gene            complement(8977..10305)
                     /locus_tag="RJ318_000231"
     CDS             complement(8977..10305)
                     /locus_tag="RJ318_000231"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDV7430138.1"
                     /translation="MVERYSREIMAKKWDMQAKYDAWLKVELAAVKAWNKLGLINDTD
                     CEKILKNAKFDIARIDEIEKTTKHDVIAFLTSVSESLGEESRFVHYAMTSSDCIDTAV
                     ALQIKESLELILEDVSLLLEVIKKRALEHKNTLMVGRSHGIHGEPITFGLVLAIWYDE
                     ILHAKELLEHAKEVISYGKISGAMGNFAHAPLEFEEEVCKNLGLKAAPVSNQVIQRDR
                     YAQVISAIAILASSCEQIAVAIRHFQRTEVYEAEEYFSVGQKGSSAMPHKRNPVLSEN
                     ITGLCRVLRSFVTPALENVALWHERDISHSSVERFILPDAFITADFMLMRLTNLIDKL
                     LVYPENMMKNLNLTGGLVFSGRVLLELPFKGISREEAYKIVQRNAMKVWADLQNGKAA
                     INEKNESLFLLALLSDEDLRKSLSEEDVRKCFDYNYYTKNVDVIFKRTFK"
     gene            10383..11285
                     /locus_tag="RJ318_000232"
     CDS             10383..11285
                     /locus_tag="RJ318_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDV7430139.1"
                     /translation="MAYIKIKLSNNGKKAFQVLMENLKISINEAQKLIDKKRLFCDGI
                     LVEEKNEILNGLVELIVYENNPKGVEIVFENEDFAILEKESGILSHPNGRHCKYSLSD
                     EIWHLWGKEACVAHRLDKETSGLILVAKNKKAQIDLKALFEKKLVQKEYLALANGKIE
                     ENFIIDKAINLAKNYDDVKTRMQICKEGKQAITEFEILEYFPKINATLLLCKPLTGRQ
                     HQIRVHLHYKNHTILGDPLYGLSKEQIESILDEKLTPKERLKLTGALRLCLHSYRLKF
                     QYKNQNFNINSKINIKEIFNNSIK"
     gene            11397..12275
                     /locus_tag="RJ318_000233"
     CDS             11397..12275
                     /locus_tag="RJ318_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HDV7430140.1"
                     /translation="MKFVNFIQGQKHNLGVLNSSGKIVSFTDLGIETNDMNEFIIYFD
                     KFKHKLTDLDSKIAYEIPKENYLAPIIEPRQDIICLGINFLDHAKESAKFKGEKFEER
                     EYPVYFGKRCNQATPPFGDIPLHADVTSQLDYECELAFILSKDAYKIKAKDAKDYIFG
                     YTIINEISARELQKRHKQFYRAKSLEGSTIMGPYITSVDEISYPPKLQLQSYVNDELR
                     QNSNTQLFIFDIAYVLEELSAGMLLKAGSIISMGTPSGVGMGLNPPTFLKSGDKVRCV
                     IENLGELCNKIKNINY"
     gene            12339..13253
                     /locus_tag="RJ318_000234"
     CDS             12339..13253
                     /locus_tag="RJ318_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HDV7430141.1"
                     /translation="MKKIIMILCLSYANIVFAVDMITPIPNSISYDKEKAKLGKSLYM
                     DKSLSKDGKVSCNTCHRLDQHGVDGLEFSIGVDNQLDKPFNTPTTFNSVFNFVQFWNG
                     RAKDLAEQATVPFFNPKEMGLSPELLLQKVNSNENYVKTFKKLYGEVTVENIALAIAE
                     FEKTLITPNSPFDRYLSGDQNAISAQAKKGYEDFKANGCISCHQGQNIGGNMFQKIGI
                     FEEYPNQEDLGRYEITKREADKMVFKVPSLRNIAKTAPYFHDGSIPTLDACVQFMAYY
                     QLGKFLDQETVDNIVAFLESLTGEYHDK"
     gene            13243..15020
                     /locus_tag="RJ318_000235"
                     /pseudo
     CDS             13243..15020
                     /locus_tag="RJ318_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343491.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
     gene            15126..15293
                     /gene="dba"
                     /locus_tag="RJ318_000236"
     CDS             15126..15293
                     /gene="dba"
                     /locus_tag="RJ318_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein Dba"
                     /protein_id="HDV7430142.1"
                     /translation="MEFLELLLVLIALILIIKKPEKENLAFGLVMVAWLLMVFFYVGH
                     KTGALLTIMNL"
     gene            15305..16831
                     /gene="dsbI"
                     /locus_tag="RJ318_000237"
     CDS             15305..16831
                     /gene="dsbI"
                     /locus_tag="RJ318_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbI"
                     /protein_id="HDV7430143.1"
                     /translation="MNEINKTKNFYTLMCLAGFLIILLPVGIANLIFGYMLGDSPCTL
                     CWGQREAMIFIGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGF
                     GLAVFGIHTYFWAEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSFAAVL
                     ISAIIVASNVFQAFVSTGIPPYVGQGDPVRFSLNPKYIIWSKEGWNGLWQNISFLGKR
                     DVKAPDYAFAPASEKLGIKFDNDINNAPFAKINDELKITNEQTINFDKAINTLDYINN
                     EFVASSKWDVAFLDNNFSVKEGFELDPYFSASIDPIIGIIPYMNDKFILMGSNKSFLR
                     FAKNPNASEEDIAKQYADFVKGNDKFKGQGESLGRGRLDTVRAKFNHVASMTTDGNYL
                     YLATVPNNKDAKTFVISKVSLKDRVLSGEFTPKANLKEGKTLGDLYVTSMTFKDGEIY
                     ALSKNHNVIAVIDPVKEEVVKTIAFPSSITNARSIFFKDGKINILSYQDGANKLYTLN
                     "
     gene            complement(16852..17526)
                     /gene="queC"
                     /locus_tag="RJ318_000238"
     CDS             complement(16852..17526)
                     /gene="queC"
                     /locus_tag="RJ318_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDV7430144.1"
                     /translation="MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKE
                     KECFKQICKALKVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCTSDTPPITYVPFR
                     NGIFLSIAGSLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVC
                     IKTPLVRLNKAKIVELALKENVPLELTWSCYESEDEACGECDSCLLRLRGFEKAGFKD
                     KIKYKS"
     gene            17603..18829
                     /locus_tag="RJ318_000239"
     CDS             17603..18829
                     /locus_tag="RJ318_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HDV7430145.1"
                     /translation="MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFI
                     AKMEKDVDMRVIIEGGIFEFLSRVVVTDIRPDVYHEIVRQKKAEVNAWVLSKIEPMIE
                     DIEDGEFLKRFEAYLNGNAYAKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNK
                     VEEELEDYYELIGARKIALNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVA
                     ILGYFYSLKIKACDKRLENNFYCALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMK
                     LINERILPFVPEGLRAEFSYILGIREGRNGESNFVKNEFENRTYKNAKIELCSGSLSS
                     FNENEFGAIDGKALKYCDKIAAYIEAGLSISYGVKSKELESGFLGMHEFFKENPTIDG
                     VNFFEICESLREYFKI"
     gene            18921..19445
                     /locus_tag="RJ318_000240"
     CDS             18921..19445
                     /locus_tag="RJ318_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YagU family protein"
                     /protein_id="HDV7430146.1"
                     /translation="MKKYFQKRYTLAFFIGILAGIFGAIVKWGWEVPFPPRNPNVFWP
                     ADALERVTPPKIFLEQLGLPTDWTYMFSGMQMPLSIFIVHVGFSIIFGVAYCMIAEKW
                     HRITMWQGAVFGFFVYLFAHVIVMPLIAEVPPLSEIPFDEHLSEIFGHIVWLWGMEIV
                     RRDIRNRITKEIEE"
     gene            complement(19457..21133)
                     /gene="ilvD"
                     /locus_tag="RJ318_000241"
     CDS             complement(19457..21133)
                     /gene="ilvD"
                     /locus_tag="RJ318_000241"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDV7430147.1"
                     /translation="MRSDAIKKGHLRAPNRSLLRACGLKDEDFDKPFIGVANSYIDII
                     PGHYFLNDYAKIIKDEIRKNGCVPFEFNTIGVDDGIAMGHEGMLYSLPSRELIANSIE
                     TVMNAHQLDALICIPNCDKITPGMLMGALRVNVPTIFVSGGPMASGVTKKGEKISLSS
                     VFEAVGAYESKKISEEEFKDIECSACPSGGSCSGMFTANSMNTLCEAMGIALEGNGTI
                     LALSKEREELLRKAARRICEIALDERFKIRNIITQKAVRNAMVVDMAMGGSSNTVLHM
                     LAISREAGVALDIKDLNFISSKVAHIAKIAPSLNSVYMDDIHKAGGVSAVMAEISSRQ
                     GHILELDALTITGESLKERLKNAKIKDENIIRKVDNAYSKVGGLAILFGNLAEQGCVI
                     KTAGIIGERKFKGKAVCFNSQDEAIKGIIKGKVQKGNVCVIRYEGPKGGPGMQEMLSP
                     TSLLMGMGLGADVALITDGRFSGATRGLSVGHISPEAAEGGLIGLLKDGDEIEIDVDA
                     YTIHANVSEEEIAKRKKEFALPQKEVSSRWLRMYQKLVSNASKGAVLDME"
     gene            21293..21940
                     /locus_tag="RJ318_000242"
     CDS             21293..21940
                     /locus_tag="RJ318_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="desulfoferrodoxin FeS4 iron-binding
                     domain-containing protein"
                     /protein_id="HDV7430148.1"
                     /translation="MRQYETYKCQKCGNEVEVQNVGGGKLSCCGEEMKCITTDLTAVN
                     LMKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAEFKAYHEIVDG
                     KPLEVTTKNLVTAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKVEIEHEREY
                     LALKKMLEEEEFFNSEVEELWVCEVCGHIHRGKKAPAACPLCKAPKEYFKREFLG"
     gene            22005..22244
                     /locus_tag="RJ318_000243"
     CDS             22005..22244
                     /locus_tag="RJ318_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HDV7430149.1"
                     /translation="MKKLLFLFFALTAFLFGAVNINTATLKELKSLNGIGEAKAKAIL
                     EYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITIE"
     gene            22277..22852
                     /locus_tag="RJ318_000244"
     CDS             22277..22852
                     /locus_tag="RJ318_000244"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDV7430150.1"
                     /translation="MKTLFDTKELLNEFDINLIGIDEAGRGALAGPMMMAACKLNKQL
                     DGLCDSKKLSEKKREELYEIIIKNSNYLILAFSSEQIDALGLSTCLKKGLKLIKKHFK
                     TENNFLYDGNTNLGINGIKTQIKADTSILQVSAASILAKVSKDRVMNFLAKDFPCYEF
                     EKNKAYGTKAHKEFIAKFGICKLHRKSFKLL"
     gene            complement(22853..24298)
                     /locus_tag="RJ318_000245"
     CDS             complement(22853..24298)
                     /locus_tag="RJ318_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HDV7430151.1"
                     /translation="MGNARGFLDFKRMDFKKIAPKERILNYKEFTIPLDKKEQEVQGG
                     RCMDCGVAFCHTGVMSEGKDVGCPLNNLIPEWNDLVYRSLWKEAYERLDLTNPFPEFT
                     GRVCPAPCEDSCVCAINGVSVSIKNNELSIIENAFKENLVRVNKPKQYNGKKIAVIGS
                     GPAGLACANTLNSLGYKVSVFERSDKIGGLLMYGIPDMKLDKSIVQRRVDLLKKSGIE
                     FKVNENIDSKDKVSKLLKEFDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQNTKT
                     LLKTGKGADMAKGKNVLVIGSGDTSVDCIAVATRQGAKSIVRFERSPKRPLQRSQNNP
                     WPLKADIFTTDYGLEEAIAVYGKDPREYQKMTKKFLGKTHVEGVEANDLKREFKEGKA
                     INVEISNSKKTYKADLVLLAMGFSGCEEAISKNFGVKLDEKNNISTENFQTTHKKIFA
                     CGDARKGQSLVVWAIKDGIECALSLHQNLAK"
     gene            complement(24301..26052)
                     /locus_tag="RJ318_000246"
     CDS             complement(24301..26052)
                     /locus_tag="RJ318_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HDV7430152.1"
                     /translation="MAGFQSPITINEAMQRIKNNEYLLPAFQREYVWEPWQIEELFDS
                     LIRGYPISSMLFWKVKDESKTAWKFYRFLEYYRESYHTHNDYFNTSNHKDFYAILDGQ
                     QRLTSLYFALFGNYDIHRSYNKWENNDRYFKICHFYFNLTQSKKPENENIEYEFLWLD
                     KLETKEQNIYIDKYQQKWFKCQYLYQYDSGRVRKIAKEFNLNENEEDRLDLLHQKIFD
                     KNLINFYLEEEQDPDKAVNIFIRINSNGEPLDYSDILFSIAIANWNKIDARTEINNLV
                     DKINENFDISKDLILKGFLYLFHNNIKFQINSFDKNFIESIEAKWEGIKNAFIETFRL
                     LRSFGFEAKTLSSNNAILPILYFIYHKNLTNNIVDSVKCNENRAIIKKWLLRAIILKP
                     FGGSSDTVLSNMRKAFIKDFKQNSGFFDREIELFPLEEIEKEAKYIQTIDEEYLENNV
                     IECRKNSPEAFAVLSLLYPNLDYKNNNFHKDHLHPESAYKEYEKLYKATDNCISFNIY
                     DSLPNLQMLDANENESKNNKPLKQWVNEKCNGNRKEFLGKHLIPDVDLSLENFNNFIE
                     ERKKIIIDKLKSILNKE"
     gene            complement(26062..30552)
                     /gene="gltB"
                     /locus_tag="RJ318_000247"
     CDS             complement(26062..30552)
                     /gene="gltB"
                     /locus_tag="RJ318_000247"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HDV7430153.1"
                     /translation="MDLENILENNQSIGLYHPKNEHDACGIAAVANIRGIASYKVICD
                     ALEILMNLEHRGGTGAEENSGDGAGILIQIPHDFFKTQELGFELPKKGDYAVAQMFLS
                     PNTDAKEEAKEIFLQGLKDKKLEFLGFREVPFNPSDIGASALKAMPYFLQAFVKKPSK
                     ISAGLEFERVLYSTRRLIEKRAINVPKFYFSSFSSRTIVYKGMLLSTQLSDFYLDFKD
                     VNMKSAIALVHSRFSTNTFPSWERAHPNRYMVHNGEINTIRGNVDSIRAREGLMQSEY
                     FENLDEIFPIIAKLSSDSAMFDNTLEFLALNGRTLEEAFMMMVPEPWHKNENMESKKR
                     AFYEYHSLLMEPWDGPAAIVFTDGVIMGASLDRNGFRPSRYYLTKDDMLILSSETGAL
                     KLDEKNIKAKKRLEPGKLLLVDTARGRVIADNEIKEHYANAKPYKKWLKNLVELEKQK
                     SGVYKHQFLKEDEVLKLQKAFGWSYDELKMSVAAMAQNGKEAIAAMGVDTPLAILSKT
                     YQPLYNYFKQLFAQVTNPPLDAIREEIVTSTRIYLGSEGNLLKPDENNAKRVKIALPV
                     ISNEELFEVKALNKFQVKEFSILYDYSKKTLEKALDELCVKIEDEVKKGVSIIILSDK
                     GVDEKNAYIPALLAVSGVHNHLVRKNLRTHTSLIIESGEPREIHHFACLLGYGATVIN
                     PYLVYESIQKLIANKDLNLSYEKAVENFIKASSSGIVKIASKMGVSTLQSYNGSALFE
                     CLGLSSKVIDKYFTSTTSRIEGMDLEDFEKELIALHKHAFNDTHKALDSKGIHGFRSA
                     KEEHLIDPLVIFNLQQACRNKDYKSFKKYSALVDEKQVNLRSLMEFDFSEAISIDKVE
                     SVESIVKRFRTGAMSYGSISKEAHECLAQAMNKIGAKSNSGEGGEDEERYEIKEGVDK
                     NSAIKQVASGRFGVDLNYLSHAKEIQIKVAQGAKPGEGGQLMGFKVYPWIAKARHSTA
                     GVTLISPPPHHDIYSIEDLAQLIYDLKHANKDAKISVKLVSENGIGTVAAGVAKAGAN
                     LILVSGYDGGTGASPRTSIPHAGIPWELGLAETHQTLILNKLRDRVRLETDGKLMNGR
                     DLAIAALLGAEEFGFATAPLIVLGCTMMRVCHLNTCPFGIATQDTELRDRFKGKVDDV
                     INFMYFIAEELREYMARLGFERLDDMIGRVDKLRQKSVQGKAGKLNLDKILKSLPTYN
                     RTAVHFKDYKDNKLEKTIDYRILLPLCKNAVEKKEPIKLSLEVGNQSRTFATMLSSEI
                     LKTYGKDALDEDSIHIKAIGNAGNSFGAFLLKGIKLEIIGDSNDYLGKGLSGGKIIAK
                     ISNEATFSPEENIIAGNACLYGATKGEVYLDGIAGERFCVRNSGALAVVLGTGVHGCE
                     YMTGGQVVVLGDVGANFAAGMSGGVVYIFGRHNEAHVNTELVDIKDLNAKDEKELKAV
                     IEKHITYTDSKKAKDILEKFDKKDFFKVMPRDYEKMLKMLDLCKNEKDPNLAAFLKIT
                     QK"
BASE COUNT        10268 a         5522 c         4308 g        10532 t
ORIGIN      
        1 aagtttagaa atatttaaaa aattttaata ttttaaaaaa tactcttgaa tttttttagg
       61 atcacttgtt tttgtaagtg ctaatataag caaaactctt gctttttgag gatttaaatc
      121 ttcagcacta ataaaaccta atttttcatc tgaatcactc acagcaacac aacctgctac
      181 aacccttgaa cttacaacaa ccttaagccc tttttttaaa agctctttta aaacatcttt
      241 ttgatttttg tgtatacttc ctgctccact tcctgcaaca actatgccct tagttccatg
      301 ttcaaataaa gcttttgcag cgacaccact accatcattt gaatagctat aaagaatatc
      361 tacttttggc aaacttgtga gtttgcttac atcaaaagga gcgttttttg tgtgagcttt
      421 agtaacatta ttatagaaaa agactttacc atctactata taacccaaat ccccaaaatc
      481 aggagaagag aaagcatcaa catttaaact atgagttttt actacgcctc tagcgcttaa
      541 aattttatca tttatagcta ccataacacc cttattctta gcttctttat tggcaactaa
      601 tgccactgca ttataaagat ttttcggacc atccgcactt atagcagttg atggacgcat
      661 agcgccaact agaactacgg gcttatcact tttaatggtt aaatttaaaa aataagcagt
      721 ttcttccata gtatcagtac catgagttat caccacaccg tctatcccct cagcaaaaag
      781 cttagcaatt tttttagcaa gccttaacca aatttcatca cacatatttg aactatcaat
      841 atttgctatt tgctcccaac taatatctgc taaatctcta atttgcggaa ctgctttaat
      901 taatacatct atatcaatgg ctccggccgt atatcctgtt gtagcaatag tgctatcaat
      961 gaagcctgct atcgttccgc ctgttcctaa aatagcaatc cttgatttag cttttttcat
     1021 acatactcct ataaaaagac aacatataaa taatttttta atctcttgta tattaatttt
     1081 ttaatgttat taatgcaaat tataagtaaa aatttttata aaatctcttt aacaacaaac
     1141 tgtggagtta ccattcccct aaattcattc ttagaaatac ttccaagcaa agaaatattt
     1201 tgattcaatt ctggctcttt atcaaaatta aaaaataaag cttctatggt tttattttcc
     1261 ttagttaaaa caagctttaa gtgtttttca tctttaccta gaagtttttt attttttaca
     1321 caaagatttt ctaaaacaaa aaaaggtcgt ggatttttat gtccaaaagg ttcaaaagat
     1381 tctaaaattt caagcatttc aaaatcaatt tcgctaggtt ctaagattcc taaaatttca
     1441 tctgtatcca aaaattcact ttcagaaatt tgcgaacatt cttttttgat tttattttta
     1501 aattgttcaa aattttcaga gtttaaactg attccagcag cacctttatg accaccataa
     1561 ttgcttaata tagaatttgt cttagaaatt aaagctaaaa tatcaatctt gccaacactt
     1621 cttgcactgc cttttaagtg ttcttcattt tgagaaaata caaaagcagg tttattaaaa
     1681 tgtttagcta aacgacttgc cacaatccct aaaacacctt catgccaatt taaacccgat
     1741 accacaatac aagaatcgtt ttcatcgatt tgatttaaac tatcttcaaa aagctgtttt
     1801 tcttcatctt tacgactttc attaaaacta acaatttgct ctagatattc taaagcttta
     1861 ttaaaatctt tagtgtgtaa aaattcataa gaaatacttg catcatccat tcttccagca
     1921 ctatttataa gcggagcaat taaaaatcct atattatcaa gagcaaattt atccttttga
     1981 taataatgct taatagccct aaaagcagcc cttttagatt tgttaatatg atctatacca
     2041 cgccttacta aagcacgatt taaatctcta agttccatca tatctgcaac aattgcaatc
     2101 gccaaaagtt ctaaaaattt acacatgtca tatttaagct tgcacacctc ttttaaagcc
     2161 gctatcaaat accatgcgac ttgagctcca caaatttcaa tttctggaaa atcacaatct
     2221 ttttgctttg gattgataat ggcaaaagca tcaggtaaaa catcttgagg catatgatga
     2281 tcagtgataa tcaaatctat atttttttct ttacagagtt tggctgcttc aagagcagct
     2341 attccattat ctactgttat tattaaattt acatcaagtt cgttgatgat ctcagcattt
     2401 aatccatatc catctttaaa acgatttgga attcttataa tataatcaaa acctatatca
     2461 tcgaaaaatt ctgccataat aacacaagaa atgattccat caacatcata atctcctact
     2521 atggcgactt tctcattttt ttctacagct tctttgatgc gattagctgc tttatatgca
     2581 tcctttaaac agcatggcaa aggcagatca caaagtttgg tatgcaaatc tttttcaaag
     2641 cgtgaagcca aaattttttt aatttcattt ttattaatta tcttcatagt ttatagctgc
     2701 cttgataaaa ctgcaaatga caggattaac atgctcaagt cttgatgtaa attctggatg
     2761 aaactgcaca gccaagaaaa aaggatgaca gttaagctca actgcttcaa tcaatccttt
     2821 gctttcacca cttacaatca aaccgtgttt ttcaaaatct gctctatatt ttggatttgc
     2881 ttcatagcga tgacgatggc gttcttttac actctttact tcattataaa ccttagccaa
     2941 aagggatttt tccttgatat cacatttata agcccctaaa cgcatagttc cacctaaagg
     3001 agtttttgca gtacgaattt gtttttctcc atttgtatcc ataaattcat caatcaaata
     3061 aaccacagga ttttggcatt tttcattaaa ttcacttgaa tttgcatctt taagttttaa
     3121 tacatttcta gcaaattcca ctaaagcaag ctgcatacct aaacaaattc ctaaaaaagg
     3181 aattttattt tctcttgcgt attgaatggc ttttatctta ccttctacac cacgatatcc
     3241 aaatccccca gcaaccaaaa ttccactcac atctttaaat acttcagaac tttccatatt
     3301 ttcaagtttt tcactatcta cccattttaa ctccacttta gtatctaggg ctgcacctgc
     3361 gtgtataata gcttcagtaa ggcttttata actttctttt aaatccacat atttgcctac
     3421 aaaagcgatt ttaacttcat tgcttggagc tataactctt tttaccaaag agtcccaatt
     3481 ttccatatta ggttttaaat ttttcaaatc caaaatttca gcaatagggc ttaaaatatc
     3541 ttgctttaaa aaattaagtg gaatttgata aatactagcc gcatcaacac tttctatcac
     3601 gcaatttttt tccaccccgc aagaaatagc aattttatct tttaaatctc tatcaagagc
     3661 tttttcacta cgacaaataa tcatatcagg actaatgcct atgcgcctta actcgcctac
     3721 actatgttga gttggctttg tttttaattc ccctgcagcc ttaataaaag gtactagagt
     3781 aagatgaata ttcatagcat tatttttacc cacttccaaa cgcaaagcac gaatagcttc
     3841 taaaaaaggc aagccttcta tatccccaac agttccgcct atttcaacga taagtatatc
     3901 tttgccttct cctgcttttt taatgcgatc tttgatttct cctactatat gagggataac
     3961 ttgaatggtt ttgccaagat attctccacg cctttctttt tcaatcacac tttgataaac
     4021 ccgtcctgta gtgaagttat tatcttgaga taaactctca tccaaaaaac gctcataatg
     4081 ccccaaatca agatccgttt ctgctccatc atcagttaca aaaacctctc catgctcaaa
     4141 aggactcata gtgcctggat caacattgat ataaggatca gcttttaaaa tactcacttt
     4201 aagccctgaa ttttttaaaa gtgttgcgat agaagcagcg gctatccctt tacccaaaga
     4261 acttaaaact ccacctgtta caaaaatata ttttgtttgt ttcattgata ataagcctta
     4321 tttttttatc taattatagc ttgataaaac tttttatttc attagaattt taagtaaaaa
     4381 atgcaagaat tacaaaaaat atttttatca aaaaaggaat aagcatgcaa atcactttac
     4441 tttttcacac tccattatct gtttgttctc atgcaacaag aacttgttgg caaagctttg
     4501 aaaaaggcga ttgcggtggc gaaaaagata aagaacttat cgatcgcgtg ggcaacaaat
     4561 tcaaacacgc ttcaacctta gaacatctaa actatacttt ttatatacaa ggaatttcaa
     4621 gagcttgctt acaagaagtt gcaagacacc gtcacactag tcctagtgta aaaagcacgc
     4681 gttatacctt aaaagaactt cgcaatgaag ctgaatttaa aataggagat tttgaaaatg
     4741 caagccgtta tcttgtgctt tgtggtaatg aagaggttga taacgcaagc attaaagcct
     4801 tagaaaattt acgcactatt ttacaaaaaa gcattagtct agatatagcc aaatactgct
     4861 taccagaaag ctataaaact gaacttacac taacgattaa tgcaagaagt ttgcagaatt
     4921 tcatttcttt gcgtagttca aaatcagctc tttgggagat tagaaattta gcaaatgctt
     4981 tatttgaagc cttgccacaa gaacacaaat ttatatttga acattgctta cataaagata
     5041 tagaataaat catactaatt ttatcttatt taaaatattg ttatgctacc atttataaaa
     5101 tcaagcttta cgcaagtata ttttcatata ccttgtgctt gattatagtt tcttataagg
     5161 actttttatg gataaacaat tttttcaaga ttttctaatg ctttcacaag ctcatactat
     5221 aactactctt gctatgcttt gtgttgtttt ttacgcatta aaaaaaatgc gggatataaa
     5281 aatcaatttt tctcttcgca tgctatttgc gcttttaatg ggtttggggt ttggttttgc
     5341 tttgcaatat ttggcaaatt ttccagatgc taaagaagca agtaatattc tttggtatag
     5401 cgaaacaaaa cattggtttg catttgtaag ttctgttttt gtagctttta taaaaatgct
     5461 ggttgttcct cttgtaagca tttgcattat aaaagtaatt atagaaattg ataaaaatat
     5521 caaaatatcc tccttgcttg gaataagtct tttttggata ctctttagca cagccatagc
     5581 tgcaatcttg ggtatatttt taggttatag ttttgattta ggaagtaatt ttgctatata
     5641 tgaaggaaat aaacaaattc gcgaaattca aactttttca aatattatac tagggctaat
     5701 acctagcaac atcattgcag ctattaataa agaaaatatt atagctattg tcattttttc
     5761 tttttttata ggaattagtg ctaaaaaaat ttctaaaaaa gaagagtatg aacaagcctt
     5821 taaaagtttt cataatttta tcctaacctt ttataatatt atgatgaaca tgactgctac
     5881 agttattaga tttatgcctt atgctgtagt ttgtatgatg gctaatgtgc ttttaagcaa
     5941 tggttttgaa gctatcaaaa cagctggact ttttataatg cttatttata tagctatgtt
     6001 aataatgttc ggggtgcatt ttttacttct tgcttcacaa gggctaaacc ctataaaata
     6061 tgcaaaaaaa gcatttcctg tatggttatt tgcatttagc tcaagatctt ctttgggcac
     6121 tttgcctatg actacttcaa ctttgcaaaa taaatttgga gttaattcag ctatagctaa
     6181 ttttgtagca tctataggta caacaacagg acttaatggt tgtgcgggat attttccagc
     6241 tttagcggca gtttttgtag cttttgctac acatacacat attgatttta catttgcttt
     6301 aatgatagtt ttggtagctg ttattggatc cttgggtata gctggagtac ctggaagtgc
     6361 aactatggca gcttctatta tgctagcagg gattggattt ggtaataatt ttgtcatgct
     6421 aagtttgatt ttagctatag atcctattat agatatggca agaacagcaa gtaatgtctc
     6481 aggagctatg acttcggcac tttgtactgc aaaaaatcta aaagccctag ataaagaaat
     6541 ttacaattct taatctctta aaacccaata tttttcattg ggttttagta tttattggca
     6601 accttcacat tctatgctac gatctgcaac attgactttt tcactatcag ggctttcgct
     6661 tcttagataa taagtagatt ttactccgag ctcccaagcg agttgataaa tttcatttaa
     6721 atatccccca cttgctttat caagcgataa aaagatattt aaactctgcc cttgatcgat
     6781 ccatttacca cgcacagcag cagcctttac aagaattttt tgatcaagtt cgtaggctgg
     6841 agtatagtat tgccaagtat caaggcttaa atttggcaca acaacaggta tcataccact
     6901 taaattttgt tcaaaccact ttcttttgta aacaggttct atagtctgcg tagtacccac
     6961 taaaatagaa atagaagaag taggtgcaat ggccatcaaa taaccatttc tcataccatc
     7021 ttttttaact ttttctctaa gtttaaccca gtcgcattca ctttgatcaa ataagccctc
     7081 tcttaaagtt aaagctttag ccttaggact tgctacatca ataggaaaaa tccccttgct
     7141 ccaatttgat ccttcaaaat cttcataaga acctttttca agagctaaat ttgaactcgc
     7201 attaatagcc tcaaagctaa tttgttccat aatctcatcg attttattta aatgctcatc
     7261 gcttccccaa taaatcttag cctcagcaag catttgtgcc tcacccatga ctccaagacc
     7321 tatggcgcga gattttaaat ttgtatcttt tacttttcta tgaggataaa aatttaaatc
     7381 tatcacatta tcaagcatac gaatagccgt tggcacaaca cgctctatat cttctttagt
     7441 atacactttg ctaagattta tacttgctaa attacaaacg gctgtttttc catcattttt
     7501 atatttttcc actatataaa ctttattacc atcaatacta tctaaagttg agattttttt
     7561 ggctggtttt tcatatcccc catcgatcac aactttttgt tcttcatcaa aatgaagctc
     7621 atctccattt tcaaaaacta ctttgatttg ataataattt ggctcggtat tttgaaaaat
     7681 ttcagtacat aaatttgaac ttctaataat tcctacatga gcatttggat ttgctctgtt
     7741 ggcactatct ttaaagcata aaaatggcaa gcctgtttca aaataattta gcaaaatttt
     7801 cttccaaagc tctttagctt ctacgatttc tttggtaatg ctttcatctt tttcatattc
     7861 ttcatagcgt ttttcaaaag cctcgccata taaatcacac aaatccgccg tatccgcagg
     7921 atcaaaaaga gtccatttat cattagctct tactctcttc ataaaaagat cattgatcca
     7981 taaagcaggg aaaagttcat gagcacggcg tctttcttca cctgaatttt tacgcaaatc
     8041 aataaaatca cttatatcca tatgccaagg ttctatataa acagctatag ctccttttct
     8101 ggttcctagc tgatctactg ccacggcaat atcattagta attttcaaga aaggtataat
     8161 ccctcctgcg gcatttttat gcccatctat gcttccaccc atagcacgca ctttagacca
     8221 atcccaacct ataccgccac caaatttaga aagcaaagcc atttcttggt aagaatcaaa
     8281 aataccttca atattatcag gggttgatcc tatataacaa gaactaagct gatggcgcgt
     8341 tgttcttgca ttagataaag tcggagttgc aagcatgagt tcaaatttag aaattaaatc
     8401 ataaaatttc ttcgcccatt cttgaggatt aaattcattc tgcgctaaaa acatcgcaat
     8461 ggccataaac atttgttgag gaagttctat aggcatacct ttactatctt taatcaagta
     8521 tctatcatat aaagttttaa taccaagata agtaaattgc atatcgcgtt caggtttaat
     8581 ataagcattt aaatcatcta aatcgtattt ttctttaaga ccaagtaaga ttcttccttc
     8641 tttttcgccc ttttcaaaat actcacgcaa atgattatag cgattcatac cattaacttt
     8701 tttatataaa tcaaataaaa aaagtctagc tgcaacaaag gtccaatttg gacaatcaat
     8761 atctatctta tctactgcag ttttaattaa agttttttga atttcttcag ttgaaattcc
     8821 atcacgaaat tgaatctttg catcgagttc aagttcgctt aaattcacac cttctaaatc
     8881 ttttacagca tcagaggtgc attttttgat cttagaaaca tccaattctt ctgtacgacc
     8941 atttctttta ataactttca ttgccttcct tgctttttat ttaaatgttc ttttaaaaat
     9001 tacatcaaca ttttttgtat agtagttata atcgaaacat tttcttacat cctcttcgct
     9061 caaacttttt cttaaatctt catcgcttaa aagcgctaac aaaaacaaac tttcattttt
     9121 ttcattgata gcagccttac cattttgcaa atctgcccaa actttcatag cgtttctttg
     9181 aactatttta taagcttctt cacgactaat gcctttaaat ggaagctcta aaagaaccct
     9241 ccctgaaaat acaagcccgc ctgtaagatt taaatttttc atcatatttt caggataaac
     9301 taaaagctta tcaatcaaat ttgtaagacg cataagcata aaatcagccg tgataaaagc
     9361 atcaggcaaa ataaatcttt caacactaga atgagatata tctctttcat gccaaagtgc
     9421 aacattttct aaagctggag ttacaaaaga tctaagcaca cgacaaagcc ctgtgatatt
     9481 ttcacttaaa acaggatttc ttttatgtgg catagctgaa cttccttttt gtcctacact
     9541 aaaatactct tcagcctcat aaacttcagt tctttgaaaa tgtcttatcg ctacagcgat
     9601 ttgctcacaa cttgaagcta aaattgcaat agcagaaata acttgagcat aacgatctct
     9661 ttggatcact tgatttgaaa caggggcagc tttaagacct aaatttttac aaacttcttc
     9721 ttcaaattct aaaggagcat gagcaaaatt tcccattgca ccactgattt ttccatagct
     9781 tatcacttct tttgcatgtt ctaaaagctc ttttgcatgc aaaatttcat cataccaaat
     9841 agctaacact aaaccaaaag tgataggctc tccatgaatt ccatgacttc ttcctaccat
     9901 taaggtattt ttatgctcca aagcacgctt tttgatcact tctaaaagca aagaaacatc
     9961 ttctaaaata agctccaaac tctcttttat ctgtaaagca acagccgtat ctatacaatc
    10021 agaacttgtc attgcataat gcacaaaacg actctcttct cccaaacttt cacttacact
    10081 tgtaagaaaa gcgataacat cgtgttttgt ggttttttct atttcgtcta ttcttgcaat
    10141 atcaaatttt gcatttttaa gaattttttc gcagtctgtg tcattaatga gaccgagttt
    10201 attccaagct tttacagcgg ctaattctac ttttaaccac gcatcgtatt ttgcttgcat
    10261 gtcccatttt ttagccatga tttctctgct atatctttca accatctttg aaaccttttt
    10321 agctataatt ttatatttta aaaaacagaa attatatcaa attatcctaa gaaagttatt
    10381 aaatggctta cataaaaata aaactctcaa ataatggaaa aaaggcattt caagtcctta
    10441 tggaaaattt aaaaattagc ataaatgaag cacaaaaact catagacaaa aaaagacttt
    10501 tttgtgatgg aattttagta gaagaaaaga atgaaatttt aaatggttta gtagagctta
    10561 tagtctatga aaacaatccc aaaggagtag aaattgtctt tgaaaatgaa gactttgcca
    10621 tacttgaaaa agaaagtggg atcttaagtc atccaaatgg tagacattgt aaatacagtc
    10681 ttagtgatga aatttggcat ctttggggaa aagaagcttg cgtagcacac agacttgata
    10741 aagaaacgag cggacttata cttgtagcca aaaataaaaa agctcaaatt gatcttaaag
    10801 ctttgtttga aaaaaaactg gttcaaaaag aataccttgc tctagctaac ggaaaaatag
    10861 aagaaaattt tataattgat aaagccataa atttagccaa aaactacgat gatgtaaaaa
    10921 caaggatgca aatttgcaag gaaggaaaac aagctatcac tgagtttgaa attttagaat
    10981 actttcctaa aatcaacgct actcttttac tctgcaaacc cttaacaggc agacaacacc
    11041 aaataagagt gcatttacac tataaaaacc ataccatttt aggcgatcca ctttatgggc
    11101 ttagcaaaga acaaatcgaa agtattttag atgaaaaatt aacccccaaa gaacgcttaa
    11161 aacttacagg tgccttgcgt ttgtgtttgc attcttatcg tttgaaattt caatataaaa
    11221 atcaaaattt taatatcaac tcaaaaataa acataaaaga aattttcaac aattctataa
    11281 aataaaatga tgtttcacta cgctacaatc aatcactttt ttaccaaatt ttaaaacaaa
    11341 aaaataattc ttgctaaaac tttaagtata attaaataaa aaagcgagat tttccaatga
    11401 aatttgttaa ttttatacag ggtcaaaaac acaatctagg agtactaaat tctagtggaa
    11461 aaattgtaag ttttactgat cttggcattg aaactaacga tatgaatgaa tttattatct
    11521 attttgataa atttaaacac aagcttacag acttggattc taaaatagcc tatgaaattc
    11581 caaaagaaaa ttatctagcc cctattatag aacctcgcca agatattata tgtcttggga
    11641 ttaatttttt agatcatgcc aaagaatctg ccaaatttaa gggtgaaaaa tttgaagaaa
    11701 gagaatatcc tgtatatttt ggaaaacgct gcaatcaagc tacgccacct tttggcgata
    11761 tacctttaca tgcagatgta acttctcagc ttgattatga atgtgagctt gcatttattt
    11821 taagtaaaga tgcttataaa atcaaagcta aagatgcaaa agattatatc tttggctata
    11881 ctattatcaa tgaaatttca gctcgcgaac ttcaaaaacg ccacaaacaa ttctaccgag
    11941 caaaaagtct tgaaggtagc actataatgg gaccttatat cacaagcgta gatgaaattt
    12001 cttatcctcc taaactccaa cttcaaagct atgtcaatga tgaactacgc caaaactcta
    12061 acactcaatt gtttattttt gatattgctt atgtcttaga agaacttagc gcaggcatgc
    12121 ttttaaaagc tggaagtatt atatctatgg gaactcctag tggagtaggt atggggttaa
    12181 atccacctac ttttttaaaa tcaggagata aagtacgttg cgtcatagaa aatttaggag
    12241 aactttgcaa taaaataaaa aatatcaatt attaaacaat ttactaaaat tacactataa
    12301 tggcatttta aaaacttaaa ttaaggcaga aatttaccat gaaaaaaata ataatgattt
    12361 tatgtttatc ttatgcaaat atagtctttg cagtagatat gataacccct attccaaatt
    12421 ccatctctta tgataaagaa aaagctaaac ttggaaaaag tctttatatg gataaaagtt
    12481 tatccaaaga tggaaaagtt tcgtgcaata cttgccatag gcttgatcaa cacggcgttg
    12541 atggacttga attttcaata ggagttgata atcaactcga taaacccttt aacactccta
    12601 caacctttaa ttctgtattt aattttgtgc aattttggaa tggtagagct aaagatttag
    12661 cagaacaagc tacagtacct tttttcaatc ctaaagaaat ggggctaagt cctgaacttc
    12721 ttttacaaaa agttaattca aatgaaaatt atgtaaaaac ttttaaaaaa ctttatggag
    12781 aagttacggt agaaaacata gctcttgcaa tcgccgaatt tgaaaaaacc ttgatcactc
    12841 caaattctcc ttttgatcgc tatcttagcg gggatcaaaa tgctatttca gctcaagcta
    12901 aaaaaggtta cgaagatttt aaagctaatg gctgcatctc ttgtcatcaa ggtcaaaata
    12961 taggtgggaa tatgtttcaa aaaatcggta tttttgaaga atacccaaac caagaagatt
    13021 tagggcgcta tgaaatcaca aaaagagaag ctgataaaat ggtatttaaa gttcctagtc
    13081 ttagaaatat agccaaaacc gcaccttatt ttcatgatgg atctatacct actttagatg
    13141 cttgtgttca gtttatggct tactatcaac taggaaaatt tttagatcaa gaaacagttg
    13201 acaatatagt tgcattctta gaaagcttaa caggagaata tcatgacaaa taaaaaaagt
    13261 tcatttttga taaaatttat tattttatct acactagttt tagctttcat tcttgtttta
    13321 ttaggtatta tttttaataa ctattcttca tctaaagata ataaagaatt gataaacata
    13381 gttcaacaac tagaaatttc agatgaaaaa atcaattctg tttttcaaaa tagttttaat
    13441 tttatcaact acgatccaag tgttcaagcg ataaaaaaat gcaagaaaac tttacaaaac
    13501 ttaaaacttt tgggattgac ataaacaaag cagaagaaat ttttaatgcc aaactaatcc
    13561 agcttaatta ttttaaatcc gcaaattcca tagcagtaaa ttcaaaactt tatttatttg
    13621 aactagctaa aaattatttt gaagaattgg aacaaaacca tgaaacaaat aaaaacaact
    13681 ataaaacaat gagttctatg ttaagcgttc tttcaactga aaatatttta caaaaaacaa
    13741 cactaaatca actcaacaat cttatgaaag aaatcaaaaa tgatacaaaa agtgaaaatt
    13801 tacaactttt tttaaaacac tataacatga ttgtaaagca aatttctatt atgcaagata
    13861 attcttctat ttatgagaat aattctctca tgaaagagtt aaaacaactt aacactttta
    13921 cccaaaatac tatagaacaa tctaatttat ttaaatttta tatcgcttta gcagtatttg
    13981 gaattactct tgtattattt gtatttttta ttttattaac actaaaaaaa gtcatcatgc
    14041 caattcatac tttagaaaaa ctaagcgcta atttagctag caaagaagcc aatctacact
    14101 ctcgtttaaa tatagatcca aaaagtgagc ttggacaaag tgctcaatat attaattcat
    14161 ttatttccac cgttcaaaac tcaatcatag aagccataga aaatgctaaa tcaagtcatc
    14221 aaaattcaca aaaactcaaa aacaactcta tgatgcttga aaacagctct aattcgcaac
    14281 atgaacaaat tcaaggagtt aaagaaatca ctcatgtttt agatgatcat atcaatcttg
    14341 cgggaaattt agcacaagaa agtatagaaa atatgcaaga tatgcacata ctaatggata
    14401 aagtagaact tactctatct gaacttgtaa atttaataaa tgaaaacaat gaaaaagaac
    14461 aaaatatagt agccaatatg gacaatctaa cccaaagtgc ggataatatt atagaaatca
    14521 caaactccat taaagacata gctgatcaaa ctaatttact tgccctaaat gcagctattg
    14581 aagctgcaag agcaggcgaa catgggcgtg gatttgctgt tgtagccgat gaagttggac
    14641 agcttgctga taaaacaagt aaatctcttt taaacatcaa tgctactgtt aatactatag
    14701 tccaacaaat caatgacaac aaagccttaa tggatcttat ccatgattct atgaaagaaa
    14761 cctcttcaaa aaccaatgat ttacaacaag aacttgtaaa ttctatgcat aaattggaaa
    14821 gctctataga atcaacccaa accatgaaag ataaaagcat ggaagtaaaa gataaaatgc
    14881 ttatcttagg aacaaatata gataaagtta acgaacttgc aaattctgtt aaagatttat
    14941 catgtgaaat caataatatc tctcaaaatg ttctaaatgg tgcctctaaa ctctccgaaa
    15001 aattaagtag ctttcagtaa cttttttcac gttaatttaa cttaacgtga aatttcaata
    15061 aaaattttat ttttaattta tgtttttcaa gtaaaattag cagtttttat ttcaaaggag
    15121 atactatgga gtttcttgaa cttttattag ttttaatcgc cttgatactg attatcaaaa
    15181 aaccagaaaa agaaaatttg gcttttggtt tggtaatggt agcttggctt ttaatggttt
    15241 ttttctatgt tggccacaaa acaggcgcac tattaacaat aatgaatctg taaggaaggg
    15301 ctaaatgaac gaaatcaata aaacaaaaaa tttctacaca ctaatgtgtt tagcaggctt
    15361 tttgattata ctcttgcctg taggtattgc aaatttgata tttggttata tgttgggcga
    15421 tagtccttgc acgctttgct ggggacaaag agaagcaatg atctttatcg gtgtaatggc
    15481 gcttttcatt gttcgttatg gtatgaaagg taaatacctt gctgctcttt taatcatgac
    15541 agcagtaggg ctttatcaat cttttgctca ctatggtaat cacgctcata gagatttaga
    15601 tcaaggtttt ggtttagcag tttttggtat ccatacttat ttttgggctg aagtagtatt
    15661 ttgggctgtt gtattgctct taggtgtgat ttttgctttt gctcctaaat ttaatgcttt
    15721 tgaagctgaa ctaaatggag aaaagtttag aaaatatact aaatttagct ttgcagcagt
    15781 tttaatcagt gctatcatcg tagcatcaaa tgttttccaa gcctttgtta gcacaggtat
    15841 tcctccttat gtaggacaag gcgatcctgt aagatttagt ttaaatccaa aatacatcat
    15901 ttggagtaaa gaaggttgga atggtttatg gcaaaatatt tctttcttag gaaaacgcga
    15961 tgttaaagct cctgattatg cttttgcacc tgcaagtgaa aaacttggca taaaatttga
    16021 taatgatatc aacaatgctc catttgcaaa aatcaatgat gagcttaaaa tcacaaatga
    16081 acaaaccata aattttgaca aagccatcaa tactcttgat tatatcaata acgaatttgt
    16141 agcaagttct aaatgggatg tagctttctt agataataat tttagcgtta aagaaggttt
    16201 tgaacttgat ccttattttt cagcttctat cgatccaatc atcggtatca taccttatat
    16261 gaacgataaa ttcattctta tgggctcaaa caaatctttc ttaagatttg caaaaaatcc
    16321 taatgcaagt gaagaagata tcgctaaaca atacgctgac tttgtaaaag gcaatgataa
    16381 atttaaaggt caaggcgaaa gtttaggtcg cggaagactt gataccgtaa gagcaaaatt
    16441 taaccatgta gcaagtatga ctacagatgg aaattatctt tatcttgcaa ctgttccaaa
    16501 caacaaagac gctaaaactt ttgtaatctc taaagtttct ttaaaagatc gtgttctttc
    16561 aggagaattt actccaaaag caaatcttaa agaaggtaaa actttaggcg atctttatgt
    16621 aacttctatg acttttaaag atggggaaat ttatgcactt agcaaaaatc acaatgtgat
    16681 tgccgtaatt gatccagtca aagaagaagt agtgaaaact atcgctttcc caagctctat
    16741 cactaatgct agaagcattt tctttaaaga tggaaaaatc aatattcttt cttatcaaga
    16801 tggagcaaac aagctttata ctttaaacta agctttaagt cctagtgaaa actaggactt
    16861 atatttaatc ttatctttaa atcctgcttt ttcaaaacct cttaaacgaa gcaaacaact
    16921 atcgcactcc ccacaagctt catcttcact ctcataacaa gaccaagtaa gttctaaagg
    16981 tacattttct tttaaggcta gttctacaat tttagctttg tttagtctaa caagcggagt
    17041 ttttatacaa actttgaaat tcttactcgt accttcattg ataaattctt gtgccttttg
    17101 tataaactca tcagtacagt caggataacc actgccatct tcttctacca cccctataaa
    17161 aatactctca caattttcct tttcagccaa agatcctgct atacttaaga aaattccatt
    17221 gcgaaaaggc acataagtga taggtggagt atcgcttgta caaagctcat ttttagggat
    17281 gtctatactt ttatcggtta aggcattgcc ccctatatcc ttgataaaac tcacatctaa
    17341 aatataagat ttttctactt ttaaagcctt gcaaatttgc ttaaaacatt ctttttcttt
    17401 ttcttgagtg cgttgttcat agtcaaaatg caaagcgatg atttcataac cttctttttt
    17461 ggccagataa gcacacaaag tactatccat accgccactt atgatacaaa gtgctttttt
    17521 actcattttt atccttaaat ttgctataat ttcacaattt taacgaaaat ttttaaattt
    17581 aaattgcaaa aaaggcaaaa gcatgataaa cataaaactc atagaacaca tttttaaagc
    17641 cgcttctatc agtcgttgga atgattatcc aagaatggca aatttggttg aacttgacaa
    17701 acaagctcat aaattcatca tcgcatattt tatcgctaaa atggaaaaag atgtggatat
    17761 gagagtgatt atagaagggg gaatttttga gtttttaagt cgtgttgtgg taactgatat
    17821 acgccctgat gtgtatcatg aaatcgtgcg tcaaaaaaaa gctgaagtta atgcttgggt
    17881 tttaagcaaa atcgaaccta tgatagaaga tatagaagat ggggaatttc taaagcgttt
    17941 tgaagcgtat ttaaatggta atgcttatgc taaagaaaga cttatcttaa aagcagcttc
    18001 atattttgct acaagatggg aatttaacat agtttatcaa acctcagctt ttttaaatga
    18061 tattgatgag attaaaaaca aagttgaaga agaattagaa gattactatg agcttatagg
    18121 agctagaaaa atcgctttaa atcaaaaaat agccaaaatt attgatctta gcggaagact
    18181 tcgctttcaa aaacgttggg ctcaaactcc acgcatacca gaaaccgcgg ttttaggaca
    18241 tatgcttgtg gtggcgattt taggatattt ttactcacta aaaatcaagg cttgtgataa
    18301 aagacttgag aataattttt attgtgcttt gtttcatgat ttgccagagt ctttaacacg
    18361 tgatattatc agccctgtaa aatacggcat tgatggactt catgatatca taaatgatta
    18421 tgaaatgaaa cttattaatg aaagaatttt accctttgta cctgagggtt taagggctga
    18481 gttttcttat attttaggca ttagagaagg tagaaacggt gagtcaaatt ttgtaaaaaa
    18541 tgagtttgaa aatcgcactt ataaaaatgc taaaatcgag ctttgcagcg gaagtttaag
    18601 ctcttttaat gaaaatgaat ttggcgctat agatggtaag gcgcttaaat actgcgataa
    18661 aattgctgct tatatagaag caggacttag tataagttat ggtgtaaagt ctaaagaact
    18721 tgaaagtggt tttttaggaa tgcatgagtt ttttaaagaa aatcctacca tagatggggt
    18781 gaattttttt gaaatttgcg aaagtttaag agaatatttt aaaatttaaa taagattttt
    18841 atactcctat tttcaatatg ttttaaataa aaatattata aattcaaatt ttattttgta
    18901 taaaacataa aggagttatt atgaaaaaat actttcaaaa gcgctatact ttagcctttt
    18961 ttataggtat attagcgggt attttcggag ctattgttaa atggggttgg gaagtacctt
    19021 ttcctccaag aaatcccaat gttttttggc cagcagatgc tttagaacgt gttactccac
    19081 ctaaaatttt tctagaacaa ctaggcttac ctactgattg gacttatatg ttttcaggta
    19141 tgcaaatgcc tttgtcaatt tttatagtac atgtcggttt ttctattatt tttggagtgg
    19201 cttattgtat gatagcggaa aaatggcacc gtattactat gtggcaaggt gcagtttttg
    19261 gattttttgt ttatcttttt gcccatgtta ttgtaatgcc tttaattgca gaagttccac
    19321 cactttctga aattcctttt gatgaacacc tgtctgaaat ttttggccat attgtttggc
    19381 tgtggggcat ggaaatagtt cgtagagata taagaaatcg tataaccaaa gaaatagaag
    19441 aatgaaagga aacctttcat tccatatcta aaaccgcacc tttactagca ttgctaacaa
    19501 gtttttgata cattctaagc catcttgaag acacctcttt ttgaggcaat gcaaattctt
    19561 ttttacgttt agcaatttct tcttcactta catttgcatg gatagtataa gcatccacat
    19621 caatttctat ttcatctcca tcttttaaaa gtcctataag accaccttca gctgcttcag
    19681 gggaaatatg accgacgctt aaaccccttg tagccccact aaaacgacca tcggtgatta
    19741 aagctacatc agcacctaaa cccataccca ttaaaagtga agtaggactt aacatttctt
    19801 gcataccagg accccctttt ggaccttcat agcgtattac acaaacattt cctttttgca
    19861 ccttgccttt gataatgcct tttatagctt catcttgaga gttaaaacaa acagctttgc
    19921 ctttaaattt tctttctccg attattcctg cggtttttat aacgcaacct tgctcggcta
    19981 aatttccaaa caaaatggca agcccaccta cttttgagta agcattatct actttacgaa
    20041 tgatattttc atctttgatt ttggcatttt ttaagcgttc tttgagactt tctcctgtaa
    20101 tggtcagtgc atcaagttct aaaatatgtc cttgtctgct tgaaatttca gccataactg
    20161 cactcacacc gcctgctttg tggatatcat ccatataaac actatttagc gatggggcta
    20221 tttttgctat gtgtgcaact ttgcttgaga tgaaatttaa atctttaatg tctagtgcta
    20281 cccctgcttc acgcgaaatg gcaagcatgt gtaaaactgt attgctactt ccacccattg
    20341 ccatatctac taccatagca ttacgcacag ctttttgagt gatgatatta cgaattttaa
    20401 aacgttcatc tagggcgatt tcacaaatac gacgcgctgc ttttcttaaa agctcttctc
    20461 tttctttact taaagctaaa atggttccat tgccttctag tgctataccc atagcttcgc
    20521 ataaggtatt catagaattt gctgtaaaca ttcccgaaca agatccacca cttggacagg
    20581 ctgaacattc tatatcttta aattcttctt cactaatttt tttggattca taagccccta
    20641 cagcttcaaa aacagagcta aggctgatct tttctccttt tttggttact cctgaagcca
    20701 taggcccacc acttacaaaa atggttggaa cattgaccct taaagctccc attaacatac
    20761 caggagtaat tttatcgcag tttggaatac agattaaagc atcaagttga tgagcattca
    20821 tcactgtttc aatagaattt gcgataagtt cacgacttgg taaagaataa agcatacctt
    20881 catgtcccat agctatacca tcatctacgc ctatggtatt aaactcaaaa ggtacgcaac
    20941 catttttgcg tatctcatct ttaatgattt tagcataatc atttaaaaaa taatgccctg
    21001 ggattatatc tatatagcta tttgctacac ctataaaagg tttgtcaaaa tcttcatctt
    21061 tcaaaccaca agcacgaagt aaagaacgat taggtgctct taaatgtcct ttttttatcg
    21121 catcgcttct cattgtaact cctgataata attttttaaa attatattta gcaaaactta
    21181 atttttgtga aatttatttt gatatacatt ttcataaatg ataaaaatta ttaattgaca
    21241 aaaatatttt tttataatac aatacttttt gataatcaaa aaaggagtca aaatgagaca
    21301 atatgaaacc tataaatgcc aaaaatgtgg caatgaagta gaagttcaaa atgtaggtgg
    21361 cggtaagctt agttgttgtg gtgaagaaat gaaatgtatc actacagatt taactgcagt
    21421 aaatttaatg aaagcttttg caggcgaatc tatggcaaga aacaaatacg atttatttgc
    21481 tgatgtagct gaagaagaag gttggcatgc ggttgctaga cattttagag aagcggctga
    21541 aaatgaaaaa tggcatgcaa gagcagaatt taaagcttat catgaaatcg ttgatggcaa
    21601 acctttagaa gtaactacaa aaaacctagt aactgctgca gaaggtgaaa actatgagca
    21661 cacaactatg tatccaaatt ttgcaaaaat cgctgaagat gaaggcaaaa aggctatagc
    21721 gagattattt acagctattg gtaaagtaga aatcgaacac gaaagagaat atctagcgct
    21781 taaaaaaatg ctcgaagaag aagaattttt taatagtgaa gtagaagaat tatgggtttg
    21841 tgaagtatgc ggacatatac atcgtggcaa aaaagctcca gcagcctgtc ctttatgtaa
    21901 agcaccaaaa gagtatttta aacgcgaatt tttgggttaa gttaagaaat tcttatcctt
    21961 tttaagataa tattataatt attttttaat aaaaggataa gaaaatgaaa aaattactat
    22021 ttttattttt tgctttaacg gcttttctct ttggtgctgt aaatatcaac actgcaacac
    22081 taaaagaatt aaaaagttta aatggtattg gcgaagctaa agctaaagcg attttagaat
    22141 accgcaaaga agcaaatttt acaagtattg atgatcttaa aaaagttaaa ggcataggtg
    22201 ataagctttt tgaaaaaatc aaaaatgata tcacaataga ataaaagggc atttttgccc
    22261 ttctttttag aaaaatttga aaactttatt tgacacaaaa gaacttttaa acgaatttga
    22321 tataaattta atcggtattg atgaagcagg acgcggtgct ttagcaggtc ctatgatgat
    22381 ggcagcttgc aaactgaaca aacaacttga tgggttgtgt gattctaaaa aactaagcga
    22441 aaaaaaacgc gaagaacttt atgaaatcat catcaaaaat tcaaactatc tcatacttgc
    22501 tttttcttca gaacaaatcg acgcactagg cttaagcact tgtttaaaaa aaggcttaaa
    22561 acttataaaa aagcatttta aaacagaaaa taacttctta tatgatggaa acaccaacct
    22621 aggtataaac gggataaaaa cacaaatcaa agccgacact agcattttgc aagtaagtgc
    22681 agctagcata ctcgcaaaag ttagtaaaga tagagtgatg aatttcttag ctaaagactt
    22741 tccttgttat gaatttgaaa aaaacaaagc ctatggcaca aaagctcata aagaatttat
    22801 agctaaattt ggaatttgca aactccaccg aaaaagtttt aaacttttat gattattttg
    22861 ctaaattttg atgcaaactc aaagcacatt ctataccatc ttttatagcc caaacaacta
    22921 aagattgtcc ttttctagca tctccacaag caaagatttt tttatgagtg gtttggaaat
    22981 tttctgtgct tatgttgttt ttctcatcta atttcactcc aaaattttta gagatagctt
    23041 cttcgcaccc gctaaaaccc atagctaaaa gcactaaatc cgctttataa gtttttttag
    23101 aatttgaaat ttcgacattt atagctttgc cttctttaaa ctcgcgtttt aaatcatttg
    23161 cttcaacacc ttctacatga gtttttccta aaaatttctt tgtcattttt tgatattccc
    23221 taggatcttt gccatataca gcaatggctt cttctaaacc ataatcagta gtaaaaatgt
    23281 cagcttttaa aggccaagga ttgttttggc ttctttgcaa aggtcttttt ggacttcttt
    23341 caaaacgcac tatagattta gccccttgtc ttgtcgctac agcgatacaa tccacacttg
    23401 tatccccgct tcctataacc aagacatttt tacctttggc catatctgca cccttgcctg
    23461 tttttaacaa agttttggta ttttgcgtta aaaaatcaag ggcaaattca acccctttta
    23521 gctttctacc ttctatatca agatctatag gcttacttgc tcctgtacaa agcaccaaag
    23581 catcaaattc ttttagaagt tttgaaacct tatctttgct gtctatattt tcattcactt
    23641 taaattcaat cccacttttt ttaagcaaat ccacccgtct ttgaactata cttttatcaa
    23701 gcttcatatc agggatgcca tacatcaaaa gtccgcctat tttatcgctt ctttcaaaaa
    23761 cacttacttt ataacctagt gaatttaaag tattggcaca agcaagccca gcaggcccac
    23821 ttcctatgac agcgattttt ttgccattgt attgcttagg tttatttact cttactaaat
    23881 tttccttaaa agcattttct ataatggata attcattatt ttttatgctc acactaacac
    23941 catttatcgc acacacacaa gaatcctcac aaggagcagg gcaaacacga ccggtaaatt
    24001 caggaaaagg attggtaaga tcaagtcttt cataagcttc tttccataaa gaacgataaa
    24061 caagatcgtt ccattcagga atgagattgt ttaaaggaca gcccacatct tttccttcgc
    24121 tcatcacacc cgtatgacaa aaagctaccc cacaatccat acatcgtcca ccttgaactt
    24181 cttgttcttt tttatccaaa ggtatagtaa attctttgta atttaaaatc ctttctttag
    24241 gagcaatttt tttaaaatcc attcttttaa agtccaaaaa acctcttgca tttcccattt
    24301 ttactcctta tttaatatac tttttagctt gtctataata attttttttc tttcttctat
    24361 aaaattatta aaattttcca aagataaatc aacatcagga attaagtgtt ttcctaaaaa
    24421 ttcctttcta tttccattac atttttcatt tacccattgc tttaaaggtt tgttattttt
    24481 agattcattt tcatttgcat caagcatttg taaatttggt aaagaatcat aaatattaaa
    24541 agaaatacaa ttatctgtag ctttataaag tttttcatat tctttatatg cggactctgg
    24601 atgcaaatga tctttatgaa aattattatt tttataatct aaatttggat aaagtaaaga
    24661 taacacagca aacgcttcag gactattttt acggcattct atgacattat tttctaaata
    24721 ttcttcatct attgtttgta tatattttgc ctctttttca atttcttcca atggaaataa
    24781 ttctatttct ctatcaaaaa agccactatt ttgcttaaaa tctttaataa aagctttacg
    24841 catgttagac aataccgtat cactacttcc accaaaaggc tttaaaataa ttgcccttaa
    24901 caaccatttt tttattatag ctctattttc attacacttg acagaatcta ctatattatt
    24961 tgtcaaattt ttatgataaa taaaatataa aatgggtaaa atagcattat ttgatgaaag
    25021 tgtttttgct tcaaatccaa aacttctaag caatctaaat gtttcaataa aagcattttt
    25081 tatgccttcc catttagctt ctatggattc tataaaattt ttatcaaaac tattgatttg
    25141 aaatttaata ttgttatgga ataaatataa aaatccttta aggattaaat ctttagagat
    25201 atcgaaattt tcattaattt tatctacaag attatttatt tctgttcttg catcaatttt
    25261 attccaattt gcaatagcaa tactaaataa aatatcagaa taatcaagag gctcaccatt
    25321 tgaattaatt ctaataaaaa tattaaccgc tttatctgga tcttgttctt cttctaaata
    25381 gaaattaatt aaattcttat caaatatctt ttgatgcaat agatctaatc tatcttcttc
    25441 attttcgttt aaattaaatt cttttgctat ttttcttact cttcctgaat catattgata
    25501 taaatactga cacttaaacc atttttgctg atatttatca atataaatat tttgttcttt
    25561 tgtttctaat ttatcaagcc ataaaaattc atattcaata ttttcatttt ctggtttctt
    25621 gctttgagtg agattaaaat aaaaatgaca aattttaaaa tatctatcat tgttctccca
    25681 tttattatat gatctgtgaa tatcataatt tccaaacaaa gcaaaataaa gcgaagttaa
    25741 tctttgttgt ccatctaaaa tcgcataaaa atctttatgg tttgaggtgt taaaataatc
    25801 attatgcgta tgatacgatt cacgataata ttctaaaaat ctataaaatt tccaagctgt
    25861 cttgctttca tcttttactt tccaaaaaag catagaactt ataggatatc ctcgtattag
    25921 tgaatcaaat aattcttcta tctgccaagg ctcccaaaca tactctcttt gaaatgctgg
    25981 aagtaaatat tcattgtttt ttattctttg cattgcttca ttaattgtta ttggtgattg
    26041 aaatcctgcc atttttactc cttatttttg tgtgattttc aaaaatgctg ctaaatttgg
    26101 atctttttca tttttacaaa gatcaagcat ttttaacatc ttttcataat ctcttggcat
    26161 gactttaaaa aagtcttttt tatcgaattt ttctaaaata tctttagcct ttttagaatc
    26221 tgtataagtg atatgttttt ctatcacagc ttttaattct ttttcatcct tagcattaag
    26281 atctttaata tccacaagct cggtatttac atgagcttca ttgtgtcttc caaagatata
    26341 aacaacgccc ccactcatac cagcagcgaa attcgcaccc acatctccaa gaactacaac
    26401 ttgtccacct gtcatatatt cacaaccatg cacgcctgtt cctaaaacca cagccaaagc
    26461 ccctgaattt cttacacaaa atctttcccc tgctatacca tctaaataca cttcaccttt
    26521 tgtagctccg tataaacaag catttcctgc gatgatattt tcttcaggtg aaaaagtggc
    26581 ttcatttgaa atttttgcta tgattttacc accacttaaa cccttgccta aataatcatt
    26641 gctatcgcct ataatctcaa gtttaatacc ctttaacaaa aacgctccaa agctattgcc
    26701 tgcattgcct atagctttga tatggatact atcttcatct aaagcatctt ttccataagt
    26761 ttttaaaatt tcacttgaaa gcatagttgc aaaagtacga ctttgatttc ctacttctaa
    26821 agaaagtttg ataggctctt ttttctccac agcattttta caaagtggta gtaaaattct
    26881 ataatcaatc gttttttcaa gtttattgtc tttataatct ttaaaatgca cagcggttct
    26941 attataagta ggcaaggatt ttaaaatttt atctaaattt agctttcctg ctttaccttg
    27001 cacacttttt tggcggagtt tatccacgcg acctatcata tcatctaggc gttcaaaacc
    27061 aagccttgcc atgtattctc taagctcctc agctataaaa tacatgaaat taatcacatc
    27121 atctactttg cctttgaaac gatctctaag ttctgtatct tgagtggcta taccaaaagg
    27181 acaggtattt agatgacaaa ctctcatcat tgtacaacct aaaacaatca aaggagcggt
    27241 tgcaaaacca aattcttcag ctcctaaaag tgctgctatg gctaaatcac gcccattcat
    27301 aagctttcca tcagtttcta atcttaccct atctctaagc ttatttaaga tcaaagtttg
    27361 atgcgtttca gctaagccta actcccaagg aattccagca tgcggtatag aagttctagg
    27421 acttgcaccc gtacctccat cataacctga aacaaggatt aaattcgcgc ctgccttagc
    27481 cacacctgca gcaaccgttc ctatgccatt ttcgcttaca agttttactg aaattttagc
    27541 gtctttgttc gcatgtttta aatcataaat gagttgagcc aaatcctcaa tagaataaat
    27601 atcatgatga ggaggtgggg aaataagcgt cacacctgca gtagaatgtc tagccttagc
    27661 tatccaagga tagactttaa agcccattaa ttgtccgccc tcacctggtt ttgcaccttg
    27721 agcgactttg atttgaattt cttttgcatg acttaagtag tttaaatcca cgccaaaacg
    27781 cccacttgct acttgcttaa tggctgagtt tttatccaca ccctctttga tttcatagcg
    27841 ttcttcatcc tcaccacctt cacctgaatt tgatttagca cctattttat tcatagcctg
    27901 tgctaaacac tcgtgtgctt ctttagaaat agaaccataa ctcatcgccc ctgttctaaa
    27961 gcgtttaact atactttcta cactttcaac cttatctata ctgatagctt cactaaaatc
    28021 aaattccatc aaagaacgca aattaacttg tttttcatct actaaagccg agtatttttt
    28081 aaagctttta tagtctttgt tgcgacaggc ttgctgaaga ttaaaaatca caagcggatc
    28141 gattaaatgt tcttctttag cacttctaaa accatgaatt cctttagaat ctaaagcctt
    28201 atgtgtatcg ttaaaagcat gtttgtgtaa agcaatgagt tctttttcaa aatcttctaa
    28261 atccatacct tcaatgcgtg aagttgtaga agtgaagtat ttatcaatca ccttagagct
    28321 taagcccaga cattcaaaaa gtgcagagcc attataactt tgcaaggtag aaacccccat
    28381 tttagaagca attttgacta taccacttga acttgccttg atgaaatttt ctaccgcctt
    28441 ttcataactt aaatttaaat ctttattggc aatgagtttt tgtatactct cataaaccaa
    28501 ataaggatta ataacagtcg caccataacc taaaagacat gcaaaatgat gaatttctct
    28561 aggttcacca ctttcgatga taagacttgt atgtgttctt aaattttttc ttactagatg
    28621 attatgcact ccagaaacag caagcaaagc agggatataa gcgttttttt catccactcc
    28681 tttatcgctt aaaatgataa tagaaacacc ttttttaacc tcatcttcta tcttaacgca
    28741 aagttcatct aaagcctttt ctaaagtttt tttagaataa tcataaagta tagaaaattc
    28801 tttaacttga aatttattta aagccttaac ttcaaaaagt tcttcattgc ttatcacagg
    28861 caaggctatt tttacgcgtt ttgcattgtt ttcatcgggt tttaataaat tgccttcgct
    28921 tcctagataa atccttgtag aagtaacaat ctcttctctt atggcatcaa gaggaggatt
    28981 agttacttgt gcaaaaagtt gtttaaaata attatacaaa ggttgataag ttttagaaag
    29041 tatagccaaa ggagtatcta cacccatagc tgctatagct tctttaccat tttgagccat
    29101 agcagccacg ctcattttaa gctcatcata actccaacca aaagcttttt gaagttttaa
    29161 aacctcatct tcttttaaaa actgatgttt ataaactccg cttttttgtt tttcaagttc
    29221 aactaaattt ttaagccatt ttttataagg cttagcatta gcataatgct ctttgatttc
    29281 attatcagct ataaccctac ctcttgctgt atcaacgagt aaaagttttc caggttctaa
    29341 gcgtttttta gctttgatat ttttttcatc aagttttaaa gcccctgttt cacttgaaag
    29401 tatgagcata tcatcttttg taagataata ccttgaagga cgaaaaccat ttctatccaa
    29461 actcgccccc ataatcactc catcagtaaa aactatagca gcaggtccat cccaaggctc
    29521 catcaataaa gaatgatatt cataaaaagc acgctttttg ctttccatat tttcattttt
    29581 atgccaaggt tctggcacca tcatcataaa agcttcttct aaagtacgac catttagagc
    29641 taaaaattct aaagtattat caaacattgc agaatcactg ctaagcttag ctatgatagg
    29701 aaaaatttca tctaaatttt caaaatactc actttgcatc aagccttctc tagctcttat
    29761 gctatcaaca tttccgcgta tggtattaat ctctccatta tgcaccatat aacggtttgg
    29821 atgggctctt tcccaacttg ggaaggtatt agtcgaaaag cgagaatgca ccaaagcgat
    29881 ggctgatttc atattgacat ctttaaaatc aagataaaaa tcgctcaatt gagttgaaag
    29941 aagcattcct ttataaacta tggtgcgtga agaaaaactt gaaaaataaa attttggcac
    30001 attaatagct cttttttcta taagtcgacg cgtactataa agcactcttt caaactcaag
    30061 tcctgcactt attttacttg gtttttttac aaaggcttgt aaaaaataag gcatagcttt
    30121 taaagcactt gcacctatat cgctaggatt aaaaggcact tctctaaaac ctaaaaattc
    30181 aagtttttta tcctttaaac cttgtaaaaa tatttctttt gcttcttctt ttgcatcagt
    30241 attgggtgat aaaaacatct gtgctacagc ataatcaccc tttttaggaa gttcaaaacc
    30301 caattcttga gttttaaaaa aatcatgtgg aatttggatt aaaatccccg ccccatcacc
    30361 tgaattttct tcagctcctg taccacctcg gtgttcaaga ttcatcaaaa tttctaaagc
    30421 atcacaaata accttataag aagcaatacc gcgtatatta gcaactgcag cgataccaca
    30481 ggcatcgtgt tcgttctttg ggtgatataa acctatgctt tgattatttt ctaggatatt
    30541 ttctaaatcc attttgctct ccttataaga ctgatttaaa ttttgttagc tttataagga
    30601 ttatagcata cattttttta aaatcgatat
//
LOCUS       DAPIYB010000007        30447 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.007, whole genome shotgun sequence.
ACCESSION   DAPIYB010000007 DAPIYB010000000
VERSION     DAPIYB010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 30447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30447
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.007"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..756)
                     /locus_tag="RJ318_000248"
     CDS             complement(<1..756)
                     /locus_tag="RJ318_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDV7430154.1"
                     /translation="MLNLDKFLEIAINASNQASKAILEERKNFKTWEKEDKSPLTSAD
                     LASNKILNDILGSTDIKILSEEKLLSKEECEELKTFWLIDPLDGTSGFLKGSDEFCVM
                     ISLVHDNRPVLSLIQNPSKGDIFYAHAKTKVYKNDKPLQIDQQEYEKNKYKALLSVNH
                     LSKEDEDFAKEHQLEAINIGSGLKFCAILEARAGVYKRFEKLNIWDIVAGDFLINQNG
                     GFMGDFSKKYILYSPLNYKSSPFICVSSRNFLQD"
     gene            complement(836..2104)
                     /locus_tag="RJ318_000249"
     CDS             complement(836..2104)
                     /locus_tag="RJ318_000249"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDV7430155.1"
                     /translation="MSNSVTITDNRNGKSYEFPIYDGTTGPSVVDMSSFYKQTGMFSY
                     DEGLTSTATCKSKITYIDGENGILMHRGYPIEWLAENKLYLDVVHLLLYKELPDATRL
                     EAFRYEMKKRSFIHEGMHRLFDSFPDNAHPMAVLQGAVSSLSAFYPDHLNMNVKEEYM
                     EMAARIVAKIPTIVATAYRYKHGFPMAYPNLDRGFTENFLYMLRTYPYDHVELRPIEV
                     KALDTVFMLHADHEQNASTSTVRAVGSTHVHPYACIAAGIGALWGHAHGGANEGVIRM
                     LEQIGSVDRVDEFIKRAKDKNDPFRLMGFGHRVYKNFDPRAKVLKKLRDQLIDELGID
                     TNLIKVATRIEEIALSDDYFVQRGLYPNVDFHSGLILKALGIPNEMFATLFVIGRTPG
                     WIAQWIEQKEQESLKIVRPRQLYLGETSKI"
     gene            complement(2219..3394)
                     /locus_tag="RJ318_000250"
     CDS             complement(2219..3394)
                     /locus_tag="RJ318_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDV7430156.1"
                     /translation="MHQSVIDTQALIDLKILIVIALCLLFSPHIAKILRLPLSATEII
                     LGAIIAHFGFIGKSENFALLANVGFYYLMFIAGMEVNLRAFFNMDKEIAKKSFFYIFL
                     LYALSSFIVWIFGLSLVFVIIIPVMSVGLLSLLFKDFGKECYWLNIAMIVATLAEVIS
                     IVLLTIAGAFLREGTGIIDVAQSILYLNIFLGLCLLGFKMLGVLFWWYPQLKVVLMPW
                     EDKNEKDIRFCMAIFILIIVAMVITKLEIVLGSFIAGSFIATFFDHKKDLEHKLSTFG
                     HGFLIPIFFIHIGSTFDLKMILDYKIVLQAFLLMFVMVGLRILCASVFLKRIGFKNMI
                     LFGLSHSMPLTLLIATATLGYSGKVIDEKLYSALILTALFEAIIVMSMIKFLSNSKK"
     gene            complement(3375..4211)
                     /locus_tag="RJ318_000251"
     CDS             complement(3375..4211)
                     /locus_tag="RJ318_000251"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase"
                     /protein_id="HDV7430157.1"
                     /translation="MQIMLCAISNIASGNCSEDCKYCTQSAHVKTDIQKYRRKELSQI
                     VLEAKMAKKNEALGFCLVTAGLGLDDEKLEYVCEAAKAVQKEVPNLLLIACNGMASVE
                     QLKELKKAGIFSYNHNLESSKEFFPQICTTHTWESRFQTNLNAKEAGLMLCCGGIYGM
                     GESEEDRLSFRKSLQELQPFSTPINFFIANENLKLQVPRLSADEALKIVRDTKEALPQ
                     SVVMVAGGREVVLRERQYEIFQAGAGAIVIGDYLTTKGEEPSQDIIKLKEMGFTFASE
                     CH"
     gene            complement(4213..6315)
                     /gene="topA"
                     /locus_tag="RJ318_000252"
     CDS             complement(4213..6315)
                     /gene="topA"
                     /locus_tag="RJ318_000252"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDV7430158.1"
                     /translation="MKKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGI
                     KIEDDEFIPEYRITSDHSALVKELKSKAKDAKEVYLATDEDREGEAIAYHIAKAIGKD
                     ENTLPRIVFHEITKSAIENALKNPRKLNMHSVNAQQTRRLLDRIVGYKLSPLLGQKIQ
                     RGLSAGRVQSAALKIIVDREKEIRAFVPLEYFSIDMIFQKDLDAELVEFDKAKIEKLT
                     ITNKDRAKLILEACKNEVYSISDIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTM
                     MIAQKLYEGVNTHEGVMGVITYMRTDSLNLAKEAVENARKFIQANFGKDYLPSKANVY
                     TTKTKGAQEAHEAIRPTNLSFTPEIAAKFLDKDELKLYTLIYNRFLACQMSPAISQTQ
                     NVFVKNDRVVFKISGRKILFDGYYKVYGDMDKDKILPNFKIGQNLKVQNLEMNSHFTE
                     PPSRYSEAGLVKKLESLGIGRPSTYAPTISILTSRDYVTIDKKQLIPSDVAFNVTEVL
                     EKNFSDIVDSKFTSNLENTLDEIAEDKADWQETLKEFYYPFMRKIEEGKTKIASQKTV
                     TKLGESCPDCGGELAIRKGRFGEFVACLNFPKCKYSRNLKSESKNESENTAAKAKANG
                     TGITCPSCQKGEIVERFSKRGKFYGCSAYPKCNFISKYKPSEEKCEECGETLVIKELK
                     KGTFLECLKCKIKKEMKD"
     gene            6510..7781
                     /locus_tag="RJ318_000253"
     CDS             6510..7781
                     /locus_tag="RJ318_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7430159.1"
                     /translation="MNDKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSV
                     VISSALPAINRHFEELLTQSGATLASSFTLAHLDILVRLVLTIPAIFVVILSPFAGIL
                     MDKFGKLKFILPAMVVWTLSGISGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDY
                     YSRGGFNRRENALSLQGFFCAVGGAVFISIAGFVSSYSWRYPFLVYGLGILITLMAII
                     YLFEPRKFKFYNHTKIETKTNYWQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLGLDP
                     KYIGISMSVSALCYGFFSLSYRYIIKFLSIKTIYVLTLFIVSCSFLLLFLVDSFFTVL
                     IALALLGMGGGIMLVNNTAYLFSICPENARSRAYGILASCIFLGQFLSPIISQPIVRQ
                     MGLVDAFLIWSIVIFIVCIVFLFLKQKPRIN"
     gene            complement(7809..9074)
                     /gene="secY"
                     /locus_tag="RJ318_000254"
     CDS             complement(7809..9074)
                     /gene="secY"
                     /locus_tag="RJ318_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDV7430160.1"
                     /translation="MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQN
                     NALGLFNVFSGGAAERFSIISLGIMPYITASIIMELLAATFPNIGKMKKERDSMQKYM
                     QIIRYATIVITLVQSIGVAIGLQSLHGRGGAGAIMVEDLNMFIALCAISMLAGTMLLM
                     WLGEQITQRGIGNGISLIIFAGIVSGIPRAISGTVGQINSGEMNFLTAFAIFALILIT
                     IGVIIYIELGERRIPISYSRKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASAILMFPT
                     TILQTSTNPYLQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIVFNAKDIAENLKKQG
                     GFIPGIRPGEGTSSYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFHFGGTSVLI
                     VVQVALDTMRKIEAQIYMSKYQTLSAVGL"
     gene            complement(9074..9466)
                     /locus_tag="RJ318_000255"
     CDS             complement(9074..9466)
                     /locus_tag="RJ318_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDV7430161.1"
                     /translation="MNLTKAAGSTHKTKRIGRGQGSGMGKTATKGGKGQTARKGYNEK
                     RGFEGGQQPLQRRLPKVGFTSKIQKPYVINVEKITAVKELSEITFESIKSVHKISKSV
                     NKIKLIGASAKDLVSKIKDENISVTGSK"
     gene            complement(9471..9914)
                     /gene="rpsE"
                     /locus_tag="RJ318_000256"
     CDS             complement(9471..9914)
                     /gene="rpsE"
                     /locus_tag="RJ318_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDV7430162.1"
                     /translation="MEKYNREEFEEVIVDIGRVTKVVKGGRRFRFTALVIVGNRKGLV
                     GVGYGKAKEVPDAIRKAVDDAFKNIVEVKTKGSTIAHDVEVKYNASRILLKPASEGTG
                     VIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLKG"
     gene            complement(9926..10282)
                     /locus_tag="RJ318_000257"
     CDS             complement(9926..10282)
                     /locus_tag="RJ318_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDV7430163.1"
                     /translation="MRANVLKRKLTLRIKRKKRIRAKISGCENFPRISVFKSNRTLYI
                     QAIDDVKAVTLAAVDGRKLGVKANKEGAKKIAAEFAKTLKVKKIEQAVFDRNGYVYHG
                     VIAALAESLRENGIRL"
     gene            complement(10292..10828)
                     /gene="rplF"
                     /locus_tag="RJ318_000258"
     CDS             complement(10292..10828)
                     /gene="rplF"
                     /locus_tag="RJ318_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDV7430164.1"
                     /translation="MSRIGKQPIAIPAGVEVKLEGNLLKFKKGNLAKELNTKANVNVE
                     IKDNNILFSPKGEDRQSRAYWGTYRALAYNIVVGLTQGFSKTLEINGVGYKAALKGKV
                     LELSLGFSHPINYDIPEGIEIVVDKNTIAVKGSDKQVVGQVAAQIREFRPPEPYKGKG
                     VKYSDERIIRKAGKTSKK"
     gene            complement(10907..11302)
                     /gene="rpsH"
                     /locus_tag="RJ318_000259"
     CDS             complement(10907..11302)
                     /gene="rpsH"
                     /locus_tag="RJ318_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDV7430165.1"
                     /translation="MINDIISDSLTRIRNAGMRKLETTKLLHSKVVEALVGIFQAKGY
                     IESFNVIEEDKKKFINVVLKYDEKGKSVINELKRISKPGRRVYKGKDEIKRFKNGYGT
                     IVVSTSHGVLANDEAYKAGVGGEILCTIW"
     gene            complement(11312..11497)
                     /locus_tag="RJ318_000260"
     CDS             complement(11312..11497)
                     /locus_tag="RJ318_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001085694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HDV7430166.1"
                     /translation="MAKKSMIAKAARKPKFKVRAYTRCQICGRPHSVYRDFGICRVCL
                     RKMGNEGLIPGLKKASW"
     gene            complement(11499..12044)
                     /gene="rplE"
                     /locus_tag="RJ318_000261"
     CDS             complement(11499..12044)
                     /gene="rplE"
                     /locus_tag="RJ318_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDV7430167.1"
                     /translation="MMRLKEKYNQSIKPALVKEFDIKNPMLIPVIEKVVISVGAGELA
                     KDQKVLQNVADTISLIAGQKAVITKAKKSVAGFKVREGFPVGVMVTLRKENMYAFLDK
                     LISIALPRVKDFRGLSRDGFDGRGNYNFGLDEQLMFPEVEYDKILRTHGMNISIVTTA
                     QNDKQAQKLLELIGVPFTKGK"
     gene            complement(12048..12281)
                     /locus_tag="RJ318_000262"
     CDS             complement(12048..12281)
                     /locus_tag="RJ318_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDV7430168.1"
                     /translation="MAVKLKIKKGDSVKVITGDDKGKTGKVLAVYPKTLKVVVEGCKI
                     AKKAIKPSEKNPNGGFINKEMPMDISNVAKVQE"
     gene            complement(12281..12649)
                     /gene="rplN"
                     /locus_tag="RJ318_000263"
     CDS             complement(12281..12649)
                     /gene="rplN"
                     /locus_tag="RJ318_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015106543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDV7430169.1"
                     /translation="MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVK
                     KALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPV
                     GREVRYGGFMKIVSLAPEVL"
     gene            complement(12649..12900)
                     /gene="rpsQ"
                     /locus_tag="RJ318_000264"
     CDS             complement(12649..12900)
                     /gene="rpsQ"
                     /locus_tag="RJ318_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDV7430170.1"
                     /translation="MAFKREIQGVVVKIAGEKTASVLVERKVVHPRYRKIVKRFKKYL
                     IHDERNEVKVGDTVVAVECRPLSKRKSFRLKSVLATGVE"
     gene            complement(12910..13095)
                     /gene="rpmC"
                     /locus_tag="RJ318_000265"
     CDS             complement(12910..13095)
                     /gene="rpmC"
                     /locus_tag="RJ318_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDV7430171.1"
                     /translation="MKYTEIKDKTAAELATMLKEKKVLLFTLKQKLKTMQLTNPKEIS
                     QVKKDIARINTAINALR"
     gene            complement(13082..13507)
                     /gene="rplP"
                     /locus_tag="RJ318_000266"
     CDS             complement(13082..13507)
                     /gene="rplP"
                     /locus_tag="RJ318_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDV7430172.1"
                     /translation="MLMPKRTKYRKMMKGRNRGYANRGTEFTFGEFALKATEAGRINS
                     RQIEAARIALTRFVKRQGKTWIRVFPDKPLTKKPLETRMGKGKGAVEEWVMNIKPGRI
                     IYEMAGVSEEMAREALTLAMHKLPFKTKFVTRESQNEIY"
     gene            complement(13510..14211)
                     /gene="rpsC"
                     /locus_tag="RJ318_000267"
     CDS             complement(13510..14211)
                     /gene="rpsC"
                     /locus_tag="RJ318_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDV7430173.1"
                     /translation="MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLK
                     RKLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNIN
                     IKEERKAGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGA
                     EMARTEWYLEGRVPLHTLRAKIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTE
                     ESAPAKKPRRTRRGK"
     gene            complement(14211..14636)
                     /gene="rplV"
                     /locus_tag="RJ318_000268"
     CDS             complement(14211..14636)
                     /gene="rplV"
                     /locus_tag="RJ318_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDV7430174.1"
                     /translation="MSKALIKFIRLSPTKARLIAREVQGMNAELAMASLKFMPNKGAK
                     YIANAISSAVANGGFEANEVIVKSCRVDAAAVLKRFRPRARGSASRIRKPTSHILVEV
                     AKAEVKSEEKKTVAKKTTTTKAPAKKTTSTKKATVKKES"
     gene            complement(14647..14928)
                     /gene="rpsS"
                     /locus_tag="RJ318_000269"
     CDS             complement(14647..14928)
                     /gene="rpsS"
                     /locus_tag="RJ318_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDV7430175.1"
                     /translation="MARSLKKGPFVDDHVMKKVIAAKKANDNKPIKTWSRRSTITPDM
                     IGLTFNVHNGKSFIPVYITENHIGYKLGEFAPTRTFKGHKGSVQKKIGK"
     gene            complement(14930..15760)
                     /gene="rplB"
                     /locus_tag="RJ318_000270"
     CDS             complement(14930..15760)
                     /gene="rplB"
                     /locus_tag="RJ318_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDV7430176.1"
                     /translation="MAIKTYKPYTPSRRYITGLSSEDITAKPSVRSLLVKLPAHAGRN
                     SYGRITSRHKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALIAYKDGEKR
                     YILQPRGLSVGDIVAAAESGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMIRSAG
                     AYAQLMGKEEKYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRHRGIR
                     PQTRGSAMNPVDHPHGGGEGKKNSGRHPVTPWGKPTKGAKTRRKKASDKLIISRRKGK
                     "
     gene            complement(15762..16043)
                     /locus_tag="RJ318_000271"
     CDS             complement(15762..16043)
                     /locus_tag="RJ318_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDV7430177.1"
                     /translation="MADITDIKTILYTEKSLNLQEQGVVVIQTSPKMTKTGLKAVLKE
                     YFGVTPKSINSLRMDGKIKRFRGRLGQRNNYKKFYVKLPEGVSLENTEA"
     gene            complement(16046..16660)
                     /gene="rplD"
                     /locus_tag="RJ318_000272"
     CDS             complement(16046..16660)
                     /gene="rplD"
                     /locus_tag="RJ318_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDV7430178.1"
                     /translation="MSKVVVLNDKLEKAGELDLPSKYAEVNPHNLYLYVKSYLASLRA
                     NTAHTKGRSDVSGGGKKPWRQKGRGGARAGSTRTNVWVGGAVAFGPTNERNYFQKVNK
                     KQKRLALERALADKAAKGVLFTADSLAIESGKTKDANAVIKKLGVKDALIVKDLLDEK
                     TLLAYRNLANCYVVDVTEVNAYLVSVFNAVIMEKSVLESITKEG"
     gene            complement(16657..17232)
                     /locus_tag="RJ318_000273"
     CDS             complement(16657..17232)
                     /locus_tag="RJ318_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDV7430179.1"
                     /translation="MEYIVEKIGMSRTITNPSIAVTLLRVVNAKVCEVEGGKALVAYP
                     KGKASNKCVAGQQKKYNLSAEYNRFATLEVANTEAGDLDETPLNEAKILKVSFNTKGR
                     GYSGVMKRHNFAGGPASHGSRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTIKNE
                     VVSYDAENKILVVKGAVPGYNGAMGKIRIAK"
     gene            complement(17242..17553)
                     /gene="rpsJ"
                     /locus_tag="RJ318_000274"
     CDS             complement(17242..17553)
                     /gene="rpsJ"
                     /locus_tag="RJ318_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDV7430180.1"
                     /translation="MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKI
                     KRYTVLKSPHINKDSREQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEVRAMG
                     K"
     gene            complement(17752..18513)
                     /locus_tag="RJ318_000275"
     CDS             complement(17752..18513)
                     /locus_tag="RJ318_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDV7430181.1"
                     /translation="MRINKFISHNTRYSRREADELIKQGLVKINNKIALLSDEVKFDD
                     KVFVKGKRVQKRTQFSVIIYHKQKGEIVSKKDDRGRKTIYDTLPRQFSTWLSVGRLDY
                     ASEGLLLLTDSPVIADALMHSDLEREYYLKVKGTVSKQVIEAMQNGLEIKNEKKGAHA
                     KTKITSMSFAPFIDFEIFGSSGGYTKLRVVINEGKNRELRRFFGHFDLEVMDLKRVAF
                     GALDLGMLKAGKHRYLENGEYEKLRDFLKFNEIRY"
     gene            complement(18549..20543)
                     /locus_tag="RJ318_000276"
     CDS             complement(18549..20543)
                     /locus_tag="RJ318_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HDV7430182.1"
                     /translation="MNMDENKEINKNEQNPNSNSKNNKRYKYKNRRKKLADSLQNEND
                     TPKIDQNSNKENSENSENKTEKKKKKNRNLPSKLTGNEDWQIALAECIEANRISHENR
                     LHPLKYNNSSEHKIRITPLGGLGEIGGNISVFETNKDAIIVDIGMSFPDGTMHGVDII
                     IPDFDYVRKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEH
                     GLKAERKWFRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKID
                     QTPIDGYPTDLGRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGR
                     VIMSTFSSNIHRVYQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDAD
                     EVSKYKDNEVLIVTTGSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASV
                     SAVLDYLLKAGAKVAYQEFSEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKH
                     KETAMKCGIPERNIYLMSDGDQVELCQKYVKRIKTVKTGKVFVDNQINKQIADDVVID
                     RQKLADSGIVVIIAQIDKATKTLINKPRVFSYGLVADKHDHAFSKDMAEVLGQFFINV
                     KDEVLNDPRFLENQIRQVLRKHIFRKIKKYPTIVPTIFVM"
     gene            complement(20512..21312)
                     /gene="rsmA"
                     /locus_tag="RJ318_000277"
     CDS             complement(20512..21312)
                     /gene="rsmA"
                     /locus_tag="RJ318_000277"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDV7430183.1"
                     /translation="MVKAKKQYGQNFLIDKSVLAKIIQAIPKEMNNIIEIGPGLGDLT
                     QELLKISQVKAYEIDNDLIPILKKKFQKELECGKFNLIHQDASEAFNPSLDEKPYFLV
                     ANLPYYVASHIILKALEDKNCLGLIVMAQREMAEKFCAKEGNSEFSSLGVLSAMICER
                     KILFDVDPQCFNPPPKVMSAVMSLIKTKDFDELCEIENFKNFLKDCFKAPRKQLLGNL
                     KTYKAKVLEVLSTLGLKENIRPHEICVDLYLKIYDKLKDEYGRKQRDK"
     gene            21394..21930
                     /locus_tag="RJ318_000278"
     CDS             21394..21930
                     /locus_tag="RJ318_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDV7430184.1"
                     /translation="MIICAGGNENFSFAKAIGIGLVESAFHLSQLCFKEKPSKLIFIG
                     TCGLYDKGEILEIYRSSHAFNVEFSKISHAFYTPAKYEICLEKENVSRETIKINSSNY
                     ICQNSKAAKEFSKLGFFAENMEAFSVLSVAKNLNIDAECILCATNFCNENAHEDFIKN
                     HQKAKENLEEYLKKYHYI"
     gene            21953..23023
                     /gene="rlmN"
                     /locus_tag="RJ318_000279"
     CDS             21953..23023
                     /gene="rlmN"
                     /locus_tag="RJ318_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HDV7430185.1"
                     /translation="MKELVNILDFLPEELGEKIKPMFRVKQIYQWIYQKYANNFSDMS
                     SLPKDLRLELAQNFHFSPVKCVKNEQSKDGSIKYLFELIDGLRVESVLLPMKEEKIDA
                     EGKRISHARYTICVSSQVGCKSGCSFCLTAKGGLKRNLSAGEIVGQILWIKKQNNIPY
                     ERRVNIVYMGMGEPLDNLKNVSKAVKILAQNEGLAISPRRQTISTSGLAKQIKELGQM
                     NLGVLLAISLHAVNDELRTELMPINKAYNIAAIMDAVREFPIDQRKRVMFEYLLIDGI
                     NDKLEHAKELVKLLNGIKAKVNLILFNPHEGSLYKRPSLENAIKFQDLLSNKGVTCTI
                     RESKGLDISAACGQLKERAKEQ"
     gene            23020..23118
                     /locus_tag="RJ318_000280"
     CDS             23020..23118
                     /locus_tag="RJ318_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430186.1"
                     /translation="MTMLDIFEIIFITTVVIIGFGGIVFVVTKEKK"
     gene            complement(23132..23208)
                     /locus_tag="RJ318_000281"
     tRNA            complement(23132..23208)
                     /locus_tag="RJ318_000281"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(23172..23174),aa:Met,seq:cat)
     gene            23343..23430
                     /locus_tag="RJ318_000282"
     tRNA            23343..23430
                     /locus_tag="RJ318_000282"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23377..23379,aa:Ser,seq:gga)
     gene            23477..23552
                     /locus_tag="RJ318_000283"
     tRNA            23477..23552
                     /locus_tag="RJ318_000283"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23510..23512,aa:Ala,seq:ggc)
     gene            23556..23631
                     /locus_tag="RJ318_000284"
     tRNA            23556..23631
                     /locus_tag="RJ318_000284"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:23589..23591,aa:Val,seq:gac)
     gene            23659..24189
                     /locus_tag="RJ318_000285"
     CDS             23659..24189
                     /locus_tag="RJ318_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7430187.1"
                     /translation="MQNTIIQKAVNKDLNSILEITKDALNAMKTMNFHQWDENYPNEI
                     VFQEDIQAQELYVFKENDEILGFICINEKFKPEFYKQVIFNKNYDDKAFYLHRLAVKQ
                     NAKGKGVAQKLLNFCENFALENHKASLRADTHSKNFPMNSLFKKLDFNFCGNFDIPNY
                     QDPFLAYEKILNQKAF"
     gene            complement(24169..24771)
                     /gene="leuD"
                     /locus_tag="RJ318_000286"
     CDS             complement(24169..24771)
                     /gene="leuD"
                     /locus_tag="RJ318_000286"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDV7430188.1"
                     /translation="MQKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFH
                     DLRYLDDKESVLNMDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIA
                     PSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFS
                     FDLDDFHRICLLEGLDNIALTLKHEAQIKAYEKNSKSFLV"
     gene            complement(24773..26185)
                     /gene="leuC"
                     /locus_tag="RJ318_000287"
     CDS             complement(24773..26185)
                     /gene="leuC"
                     /locus_tag="RJ318_000287"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDV7430189.1"
                     /translation="MIMAKTLYEKVFDAHVVYEGKNELPILYIDRHLIHEVTSPQAFS
                     GLKMAKRRMARADLTLATIDHDVSTKSVDLNACSDMAKEQITTLMQNTKEFGVRLLGL
                     GDKNQGIVHIVGPEFGFTLPGVTLVCGDSHTATHGAFGALAFGIGTSEVEHVMATQTL
                     KQAKLKTMKIECKGQFQKGVYAKDLILYLIAQYGTAKGTGYAIEFCGELIRNLSMEAR
                     MTLCNMAIEFGAKVGMIAPDEITFEYIKGKEFAPKGEEFQKYCEYWKSLRSDEGAKYD
                     ESITLDVSKIKPQISYGTNPSQVIGIDEKIPKISDFKNQSEQKSLLDALYYVNLEQDQ
                     VIEGVKIDIVFIGSCTNGRLEDLKIAADILKGRKIHKNVKALIVPGSMQVRKEAENLG
                     LDKIFIEAGCEWRYAGCSMCLGMNDDKANSGQRVASTSNRNFVGRQGKGSITHLMSPA
                     SAAACAIEGVICDNRKYLGV"
     gene            complement(26172..27248)
                     /gene="leuB"
                     /locus_tag="RJ318_000288"
     CDS             complement(26172..27248)
                     /gene="leuB"
                     /locus_tag="RJ318_000288"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDV7430190.1"
                     /translation="MKTYKVAVLAGDGIGPLVMKEALKILTFIAQKYNFSFEFNEAKI
                     GGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDNLPIDQRPERASLLPLRKHFN
                     LFANLRPCKIYESLTHASPLKNEIIQKGVDILCVRELTGGIYFGKQDLGKESAYDTEI
                     YTKKEIERIAHIAFESARIRKKKVHLIDKANVLASSILWREVVANVAKDYKDISLEYM
                     YVDNAAMQIVKNPSIFDVMLCSNLFGDILSDELAAINGSLGLLSSASLNDKGFGLYEP
                     AGGSAPDIAHLNIANPIAQILSAALMLKYSFKEEQAAQDIENAISLALAQGKMTKDLN
                     AKSYLNTDEMGDCILEILKENNNG"
     gene            complement(27245..28780)
                     /gene="leuA"
                     /locus_tag="RJ318_000289"
     CDS             complement(27245..28780)
                     /gene="leuA"
                     /locus_tag="RJ318_000289"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDV7430191.1"
                     /translation="MKDNKIIIFDTTLRDGEQALGSSLGINQKLQIALALENLGVDVI
                     EAGFPVSSQGDFKAVQKIASKVKNSTICALSRALDKDIDMAYEALKVAKHFRIHTFIA
                     TSTLHMQDKLKKDFDEILSMAKRAIIRARSYTDDVEFSCEDAGRTPIDNLCFMVENAI
                     KAGAKTINIPDTVGYTLPSEFANIIKILFNKVPNIDKAIISVHCHNDLGMATGNSLSA
                     ILQGARQIECTINGLGERAGNCALEEVVMAIKTRKDYLKGFYTDIKCENIFKTSKLVS
                     AITNESIPSHKAIVGSNAFSHSSGIHQDGVLKNRQTYEIISPSAIGIHENRMLMTARS
                     GRAMIKTCLENLGYDENTYNLDDVYERFLRLADKKGQVYDYDLEALMFLSYENEEENK
                     FILEKLSVISGNIPTACVCMRIKEELKTEACTGNGPVEAVFNCIARITNLKPALKAYS
                     INAKSSGVDAQGQVDVDLEFKGRKFHGKGISTDVIEASAQAFVSAYNAIYRSLKVEER
                     KMA"
     gene            29100..29729
                     /locus_tag="RJ318_000290"
     CDS             29100..29729
                     /locus_tag="RJ318_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430192.1"
                     /translation="MLKELLEIKKEMEPVIHEANVKLNVLAREVIVRKKEYEIYGPMV
                     DRVYLDNAIYVKVMSSGRDVKTDNVTIKNGFYMVFVAPEKESTKDIKNKLKVAYEGLD
                     NKFIATLIRSCQRFKEIINKTQATLAKASKMNVVVKTNLGEASAALKFNITIEYTKEN
                     QKLTRENSKSAGSFRDTKTYINLVVEKNTESQICEKLLDDVEKYFIGGG"
     gene            complement(29765..30409)
                     /locus_tag="RJ318_000291"
     CDS             complement(29765..30409)
                     /locus_tag="RJ318_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002890434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HDV7430193.1"
                     /translation="MNKKLLSIIASATLFSNLALADENSGFFIGADAAWMHAQVKSEL
                     KHKNTKQNFNGDISGNIPSFGLKLGYRLNENHRIYAGYNYSDEFSDFIKTPKIQIEGD
                     FTTHKFLTGYDFTPKLFEKTRAVLGVYGGYARTDLTLKTSFLSLSQNFDGYFYGAKIG
                     ALYDLTPHNEIELGFKAEQIHYNSRNFYQNKVGSNFYDPKQTNYGVYLGYNYKF"
BASE COUNT         9458 a         5736 c         4326 g        10927 t
ORIGIN      
        1 atcttgtaaa aaattcctag atgaaacaca aataaaagga ctggatttat aatttaaagg
       61 gctatataaa atgtattttt tagaaaaatc tcccataaat cctccatttt gattaatcaa
      121 aaaatctcct gctacaatat cccaaatatt aagcttttca aatcttttat aaactcctgc
      181 cctagcctct aaaatagcac aaaatttcaa tccagagcct atattaatag cttctaattg
      241 atgctctttt gcaaagtctt catcttcttt gctaagatga ttaacactca ataaggcttt
      301 atatttattt ttctcgtatt cttgctggtc aatttgcaaa ggtttatcgt ttttataaac
      361 cttggttttt gcatgagcat agaatatatc accttttgat ggattttgta tgagtgataa
      421 aacagggcga ttgtcatgaa ccaaacttat cataacgcaa aattcatcac tgccttttaa
      481 aaaaccactt gttccatcaa gaggatcgat aagccaaaaa gtttttaatt cttcacactc
      541 ttctttgctg agtaattttt cttctgatag aattttaata tccgtagaac ccaaaatatc
      601 atttagaatt ttattagaag caagatctgc tgatgtaagc gggcttttat cttctttttc
      661 ccaagttttg aaattttttc tctcttctaa aatagcttta gaagcttgat tgctagcatt
      721 tatagcaatt tctaaaaatt tatcaagatt aagcatgatt ataaactttc tataagattt
      781 tttaaaatta tacaagaaga ttttgtggaa tttttaattt ccacaaaaat tttaattaaa
      841 ttttactagt ttcacccaaa taaagttgtc ttggacggac tattttaaga ctttcttgct
      901 ctttttgttc tatccactga gctatccatc ctggggtgcg ccctataaca aataaagtag
      961 caaacatttc atttggaata cctaaggctt ttaaaataag tccactatga aaatcaacat
     1021 tcggatataa ccctctttga acaaaataat catcgcttaa agcaatctct tctatacgcg
     1081 ttgctacttt aataagattg gtatcaatac ccaactcatc aataagttga tcacgaagct
     1141 ttttcagtac ttttgctcta ggatcaaaat ttttataaac cctatgccca aagcccatca
     1201 agcggaaagg atcgttttta tccttagctc ttttgatgaa ttcatctacc ctatcaacac
     1261 tacctatttg ctcaagcatt ctaataacac cttcattagc tccaccatgt gcatgacccc
     1321 aaagcgcacc aatacctgct gctatacagg cataaggatg aacatgagtt gaacccacag
     1381 cacgaactgt tgaagttgaa gcattttgct catgatctgc atgaagcata aaaactgtat
     1441 caagtgcttt tacttctata ggtctaagct ctacatgatc gtaaggatag gttcttaaca
     1501 tatataagaa attttctgta aaaccacgat ctaaatttgg ataagccata ggaaagccgt
     1561 gtttatatct ataagcggtg gccactatag tagggatttt agctactatt ctagctgcca
     1621 tttccatata ttcttctttt acattcatgt ttaaatgatc aggataaaaa gcactaagcg
     1681 atgaaacagc accttgtaaa actgccatag gatgagcatt atcagggaaa gaatcaaaaa
     1741 gacggtgcat accttcatgg ataaaagaac gttttttcat ttcataacga aacgcttcaa
     1801 gacgcgtagc atcaggtaat tctttataaa gtaaaagatg aaccacatct aaataaagtt
     1861 tgttttcagc aagccactct ataggatagc cacggtgcat taaaattcca ttttctccat
     1921 caatataagt gatttttgat ttacaagtag ctgtagaagt caagccctca tcataagaaa
     1981 acattcctgt ttgtttataa aaacttgaca tatctacaac gcttggccca gttgtaccgt
     2041 catatatagg aaattcatag ctttttccat ttctattatc ggttatagta acggaatttg
     2101 acattttcgc tccttttatt gttactttta ttaattctaa caaaaaagga cgattatgag
     2161 tttttttatt attaaatttt taagattttg tttgcttttt tgagtaaaaa agtaactttc
     2221 attttttaga attagaaaga aatttaatca tactcataac aataatagcc tcaaataacg
     2281 ctgttaaaat aagcgctgaa taaagcttct catcaataac cttgcccgaa taacccagag
     2341 tagctgttgc tataagcaag gttaaaggca tagaatgact aagaccaaat aaaatcatat
     2401 ttttaaaacc aattcttttt aaaaaaacac ttgcacataa aattcttaaa cccaccataa
     2461 caaacataag taaaaatgct tgtaaaacga ttttataatc taaaatcatt ttaagatcaa
     2521 aggttgaacc tatatggata aaaaaaatag ggatcaaaaa cccgtgtcca aaagtagaaa
     2581 gcttgtgctc aagatctttt ttatgatcaa aaaaagtagc tataaatgaa cctgctataa
     2641 aagaaccaag aacgatttca agttttgtaa taaccatagc aacaatgatc agtataaaaa
     2701 tggccataca aaatcttata tctttttcat ttttatcttc ccatggcata agcacaactt
     2761 taagctgagg ataccaccaa aaaagcacac caagcatttt aaatccaagc aaacaaagcc
     2821 ccaaaaagat attaagatat aaaatacttt gcgctacatc aataatacct gttccttcgc
     2881 gcaaaaaagc tcccgctata gtcaaaagca caatagaaat cacctcagct aaagtagcca
     2941 ctatcatagc aatatttagc caataacact cttttccaaa atccttaaaa agtaaagata
     3001 aaagccctac actcatcaca ggtataatga taacaaatac taaagaaagt ccaaaaatcc
     3061 atactataaa agaagataaa gcgtaaagta aaaaaatata aaaaaaactt tttttagcaa
     3121 tttctttatc catattaaag aaggctctta aatttacctc catacccgct ataaacatta
     3181 gataataaaa acctacattt gccaaaagtg caaaattttc actttttcct atgaaaccaa
     3241 aatgcgctat tattgcccct aaaataattt cagtagctga aagaggcaag cgtaaaattt
     3301 ttgcaatatg cggagaaaaa agtaagcata aagctataac aataagaatt tttaaatcaa
     3361 ttaaagcctg tgtatcaatg acactctgat gcaaaagtaa atcccatttc ttttaatttt
     3421 attatatctt gacttggttc ttcaccttta gtggttaaat aatcccctat aacaatagcc
     3481 ccagcacctg cttgaaaaat ttcatattgt ctttctcgta ataccacttc acgcccacct
     3541 gctaccatta ccacgctttg cggtaaagcc tctttggtat cacgaacaat ttttaaggct
     3601 tcatcagcgc taagtcttgg aacttgtagt tttaaatttt catttgctat aaaaaaatta
     3661 ataggcgttg aaaaaggttg taattcttgc aaagattttc taaaacttag cctatcttct
     3721 tcactctcac ccataccata gattccacca caacaaagca taagccctgc ttctttagcg
     3781 tttaaattgg tttgaaatct actttcccaa gtatgcgtgg tgcaaatttg tggaaaaaat
     3841 tccttagaac tttcaagatt gtgattataa gaaaaaattc ctgctttttt aagttctttg
     3901 agttgttcca cgcttgccat gccattacag gcaattaaaa gcaagttagg cacttctttt
     3961 tgcacggcct tagcagcttc gcaaacatac tcaagctttt catcatcaag cccaagtcct
     4021 gctgtaacta aacaaaaacc caaggcttca tttttctttg ccatttttgc ttctaaaacg
     4081 atttgtgaaa gttctttacg acgatatttt tgaatatctg tttttacatg agcgctttgg
     4141 gtgcagtatt tacagtcttc tgaacaattt ccactcgcta tatttgaaat agcacaaagc
     4201 atgatttgca ttctaatcct tcatttcttt tttgatttta cattttaaac attctaagaa
     4261 tgtacctttt ttaagctctt ttatcactaa agtttcgcca cactcttcgc atttttcttc
     4321 acttggtttg tatttgctta taaaattgca ttttggataa gcactacagc cataaaattt
     4381 accacgtttt gaaaagcgtt ctacgatttc acctttttga caacttggac aagtaatgcc
     4441 tgtaccatta gctttagctt ttgcggctgt attttcgctt tcgtttttgc tttcactttt
     4501 taaatttctt gaatacttgc attttgggaa atttaaacac gctacaaatt ctccaaaacg
     4561 cccttttcta atagcaagct ctccgccaca atcaggacaa ctttcgccta gttttgtgac
     4621 agttttttga ctagctattt ttgtttttcc ttcttcgatt tttctcataa aaggatagta
     4681 aaattctttt aaagtttctt gccaatctgc cttatcttct gcgatttcat ctagggtatt
     4741 ttcaaggttt gaagtaaatt tactatctac tatatcgcta aaatttttct caagcacttc
     4801 ggttacatta aaagcaacat cgctaggaat gagttgtttt ttatctattg ttacataatc
     4861 acggcttgta agtatagaaa tggttggtgc ataagtagaa gggcgaccta tgcctaaact
     4921 ttcaagtttt tttacaagtc ctgcttctga ataccttgaa ggtggttcgg taaaatgtga
     4981 gttcatttct aaattttgca cttttaaatt ttggcctatt ttaaaatttg gcaaaatttt
     5041 atccttatcc atatcaccat aaactttata atatccatca aaaaggattt ttctaccgct
     5101 tattttaaaa actactctat cattttttac aaatacattt tgagtttgag agatagcagg
     5161 actcatctga caggctaaaa agcgattgta aataagtgtg taaagtttta actcatcttt
     5221 gtctaaaaat ttagccgcaa tttctggagt aaaacttaaa tttgtagggc gtatagcttc
     5281 atgagcttct tgagcgcctt tagtctttgt agtatataca tttgctttgc ttggaagata
     5341 gtccttgcca aaatttgctt gtatgaattt tcttgcattt tctactgctt ctttggctaa
     5401 atttaaacta tcggttctca tataagtaat aacccccatc acgccttcat gggtatttac
     5461 tccttcatag agcttttgag ctatcatcat ggttttttta gggttaaaac caaggcgatt
     5521 gctggcactt tgttgtaaag ttgaagtcat aaaaggaggc ggcggagcga tttttctttc
     5581 tttgctttca atgtcactta tactataaac ttcattttta caagcttcta gtataagttt
     5641 agcacgatct ttgttggtaa tggtaagttt ttctatcttg gctttatcaa actcaactag
     5701 ttctgcatct aaatcttttt gaaaaatcat atcaatacta aagtattcta ggggtacaaa
     5761 ggcacgaatt tctttttcac gatcgactat gatctttaaa gccgcacttt gaacacgccc
     5821 agcactaagt cctctttgaa ttttttgtcc taataaaggg ctgagcttat accctacaat
     5881 gcgatctaaa agacgtctgg tttgctgagc atttacagag tgcatgttta attttcttgg
     5941 attttttaaa gcattttcta tagcgctttt agtgatttca tgaaaaacaa tgcgtggtaa
     6001 ggtgttttca tcttttccta tagcttttgc aatatgatag gctatagcct ctccttctct
     6061 atcttcatcc gttgcaagat agacttcttt ggcatctttg gctttgcttt taagttcttt
     6121 aactaaggcg ctatgatcac ttgtgattct atactcaggg ataaattcat catcttctat
     6181 tttaatccca aagcttgatt taggcaaatc tctaatatgt cctttagaag cgataacttc
     6241 ataatctttt cccaaaaaat ttcctatggt tttagctttt gcaggagatt ctactatgat
     6301 taaatttttc ttcattttgc acccttgtta aataaaaagc tgaatttagc taaaaatatt
     6361 taaaattcta cttataaaat atattttaat caagctaaaa tattttaaaa acaaaactat
     6421 cataacaaaa taaataaaat ataattttaa gtaattttaa atacaaacca taatttttgg
     6481 agtataataa aataaaaaag gtaaaaatta tgaatgacaa aacttataaa tttcatccaa
     6541 atgacacaaa aatggataaa aaaataattc aaattactga aaagtccgga tttaaagcag
     6601 ctgtgttttc tatggctgct atgactatgc taggaagtgt ggtcatttca tctgctctgc
     6661 ctgctatcaa cagacatttt gaagaacttt taacccaaag tggcgctact cttgcttcaa
     6721 gtttcacatt agctcatctt gatatacttg ttcgcttagt tttaaccatc cctgctattt
     6781 ttgttgtcat tttatctcca tttgctggta ttttaatgga taaatttggc aaattaaaat
     6841 tcattcttcc agctatggtg gtttggactc tttctgggat aagtggcttt ttcttaaatg
     6901 atatttatgc tatactgact tcaagagcta tttttggtat ggcaactgct tttataatga
     6961 caggcgcttc ggctttgctt ggggattatt atagtcgtgg tggctttaat cgcagagaaa
     7021 atgctttaag tcttcaagga tttttttgtg cagtaggggg tgctgttttt atttctattg
     7081 cgggatttgt ttcaagttat tcttggcgtt atcctttttt ggtatatgga cttggaattt
     7141 taattacctt aatggctatc atttatcttt ttgaacctag aaaatttaaa ttctataatc
     7201 atacaaaaat agaaacaaaa acaaattatt ggcaattttt ccctatctat tttataggtt
     7261 tttttatcat ggtagtttat tatatttcgc caactcaact tccttactat atagaagaac
     7321 atttgggatt ggatcctaaa tatataggta tttcgatgtc tgtatctgca ctatgttatg
     7381 gttttttctc tctaagctat agatatatta taaaattctt aagtattaaa actatttatg
     7441 ttttaactct ttttatcgta tcttgttctt ttttgctgct ttttttagta gatagctttt
     7501 tcacagtttt aatcgcctta gctttgcttg gaatgggtgg aggtattatg cttgtaaata
     7561 atacggctta tcttttttca atctgtcctg aaaatgctcg ctctagggct tatggaattt
     7621 tagcaagttg tatattttta ggacaatttt taagtcctat tatctctcaa cctatcgtta
     7681 gacaaatggg tcttgtagat gcttttttaa tatggtcaat agtaattttt atagtgtgca
     7741 ttgtgttttt atttttaaag caaaaaccta gaataaatta gcaagaaaaa tcttgctaat
     7801 tttatttatt acaaacctac cgcacttaaa gtttggtatt tactcatata aatttgagct
     7861 tcaatttttc tcatcgtatc aagtgctact tgaactacaa taagtacaga agtgccgcca
     7921 aaatgaaaag gcacacccat aaatttcacc aaaacccaag gtaaggttgc aacaagccct
     7981 aaataaatag aacctgataa agttaaacga gaagccactt cgttaagata acttgaagtt
     8041 ccttcacctg gacgaattcc agggataaaa ccgccttgtt ttttcaaatt ttctgctatg
     8101 tctttagcgt taaatacgat agaagcataa aaataagcaa agaaaattac aaacaagaaa
     8161 gttagaacat gaaacaaata accatttgga tttaaaaagt cattaatggc ttgtagataa
     8221 ggatttgtac tagtttgtaa aattgttgtt ggaaacatca aaatcgcact agcaaaaatc
     8281 ggtggaataa ccccactaag attgagttta ataggaatat aattcataat gcgtttgttt
     8341 tgattttgca ttacaacttt acgagaataa gaaataggaa ttcttctttc tccaagttct
     8401 atataaataa tcacccctat ggtgattaaa atcaaagcaa aaattgcaaa agcggttaag
     8461 aaattcatct cgcctgaatt gatttgtcct acagttcctg aaatcgctct tggaatacct
     8521 gaaacaatac ctgcaaaaat gattaaagaa ataccatttc ctatacctct ttgtgtgatt
     8581 tgttcgccaa gccacattaa aagcatagtt ccagcaagca tagaaatagc acaaagtgcg
     8641 ataaacatat ttaaatcttc caccattata gcccctgcac caccacgacc gtgcaagctt
     8701 tgcaaaccta tagcaacgcc tatactttga accaaagtaa tcacaatagt cgcataacgg
     8761 ataatttgca tatatttttg catactatca cgctcttttt tcatcttacc aatatttgga
     8821 aaagttgctg caagaagctc cataataata gaagcagtaa tataaggcat aatacctaaa
     8881 gaaatgatag aaaagcgttc agccgctcca ccactaaaaa cattaaataa acccaaagca
     8941 ttgttttgat tgttattaaa aaattccgca atcacatcag cattgacgcc aggaactggc
     9001 acataagcca gaaccctata agcaaataaa aatgctaagg tgattaaaat cttattcgtc
     9061 aatgctctat tcattatttt gatccggtga cactaatatt ctcgtctttg atttttgata
     9121 ctaagtcttt tgcacttgca ccaattaatt tgattttatt cacagatttt gaaattttgt
     9181 gaacactttt aatgctctca aatgtaattt cactaagctc ttttacagct gtgatttttt
     9241 caacattgat cacataaggt ttttgaattt tagaagtaaa acctactttt ggtagtcttc
     9301 tttgaagtgg ttgttgaccc ccttcaaaac ctcttttttc attataacct tttctagcag
     9361 tttgaccttt acccccttta gtagcagtct tacccatgcc agaaccttga ccacggccaa
     9421 ttcttttagt tttatgcgtt gaacccgctg cttttgttaa attcatcttc ttatcctttt
     9481 aacattgtta aagctttgat tgtagcacga accacattag ctgaattatt tgaacccaaa
     9541 gacttggtta agatgtcttt aatacctgca agttccacga tagggcgtgt agaaccacct
     9601 gcgataactc ctgtaccttc gctagctggt ttaagtaaaa ttctacttgc gttgtatttc
     9661 acctctacat cgtgagcgat agttgagcct ttagttttaa cttcaacgat atttttaaac
     9721 gcatcgtcaa cagctttacg gatggcatct ggaacttcct tagccttacc ataaccaaca
     9781 cctactaaac ctttgcggtt tccaacgata actaaagcag taaatctaaa tcttctacca
     9841 cctttaacaa ccttagtaac tctgccgata tcgacgatta cttcttcaaa ttcttctcta
     9901 ttatattttt ccatcgattt accccttata gcctaatgcc attttctctt aaagattcag
     9961 ccaatgctgc gataacacca tgatatacat aaccatttct atcaaaaaca gcttgttcta
    10021 tctttttaac ttttaaagtt ttagcaaatt cagcagcgat ttttttagca ccttctttat
    10081 ttgctttaac gccaagtttg cgtccatcaa ctgctgctaa agttacagct tttacatcat
    10141 caatcgcttg gatatataga gttctgtttg atttaaatac agaaattctt ggaaaatttt
    10201 cacaacctga aattttcgct ctaattcttt tttttctttt gattcttaaa gttagttttc
    10261 tttttaatac atttgctctc atattctacc cttacttctt agatgtctta ccagctttgc
    10321 ggataatgcg ttcatcagaa tacttaacgc cttttccttt atatggctct ggcggtctaa
    10381 attcacgaat ttgagcagca acttgaccta caacttgttt atcacttcct ttaactgcaa
    10441 tagtattttt atccactaca atttcaattc cttctggaat atcataatta ataggatgag
    10501 aaaaaccaag gcttagttct aaaactttac cttttaaagc tgccttataa ccaactccat
    10561 tgatttcaag agtttttgaa aaaccttgag ttaaacctac aacgatattg taagctaaag
    10621 ctctgtaagt tccccaataa gctctacttt gtctgtcttc accttttgga gaaaaaagaa
    10681 tattattatc tttaatctca acatttacat ttgctttagt attaagttct tttgccaaat
    10741 ttcctttttt aaatttaagc aaatttcctt ctaattttac ttctactcct gctggaatag
    10801 caatcggttg tttacctata cgagacatat ttttcctttt tatttgtcta ggatatttct
    10861 acttttttaa aagaatggat acccaatgcc ataaaaagca gattttttac caaatggtac
    10921 ataaaatttc gccgccaaca cctgctttat aagcttcatc attagctaaa acaccatgac
    10981 ttgtgctaac tacgatagta ccataaccat ttttaaaacg cttgatttca tctttacctt
    11041 tataaacacg acgaccaggc ttagaaattc ttttaagctc attgataaca ctcttacctt
    11101 tttcatcgta ttttaaaact acattgataa atttcttttt atcttcttca ataacattaa
    11161 aactctcaat atagccctta gcttgaaaaa ttccaactaa agcttctaca actttagaat
    11221 gtaaaagctt ggttgtttca agctttctca ttcctgcatt tctgatacga gtgagtgaat
    11281 ctgaaataat atcatttatc atattttatc cttaccaact tgctttctta agacctggaa
    11341 tcaaaccttc gttgcccatt tttcttaagc aaactctgca aattccaaaa tctctataaa
    11401 ccgaatgcgg acgcccacaa atttggcatc ttgtataagc tctaacttta aatttaggct
    11461 tgcgtgccgc ttttgcaatc attgattttt tagccatctt actttccttt tgtaaatggc
    11521 acaccgataa gttctaataa cttttgtgcc tgtttgtcat tttgtgctgt tgtaactata
    11581 gaaatgttca taccatgagt tcttaaaatt ttatcatact ccacttctgg gaacatcaac
    11641 tgctcatcaa gaccgaagtt atagtttccg cgtccatcaa aaccatctct acttaaacct
    11701 ctaaagtctt tcacccttgg caaagcaata gaaattaatt tatcaagaaa agcatacata
    11761 ttttcttttc ttaaagttac cattacaccc acaggaaaac cttcgcgaac tttaaatcct
    11821 gcaactgatt ttttagcttt agtaatcaca gccttttgtc ctgcaattaa agaaatagta
    11881 tctgcaacat tttgcaatac tttttgatct ttagccaact caccagcacc tacgctgata
    11941 actacttttt cgatcacagg gataagcata ggatttttaa tatcaaattc tttaaccaat
    12001 gcaggtttaa tgctttgatt atatttttct tttaatctca tcatcgctta ctcctgaact
    12061 tttgccacat tggaaatatc cattggcatt tctttattga taaaaccacc atttgggttt
    12121 ttctcactcg gcttaatagc ttttttagcg attttacatc cttcaactac cactttaagt
    12181 gtttttggat ataccgctaa aactttacct gttttacctt tatcatcgcc tgtgataacc
    12241 ttaacgctat cacctttttt gatttttaat ttaaccgcca ttataatacc tccggtgcta
    12301 gtgaaacgat tttcataaag ccaccatatc taacttctct gcccactggc ccaaagatac
    12361 gagttccgat aggctctctt ttgttgtcaa gaataaccgc agcattttca tcaaaacgaa
    12421 tcaaagaacc attatctcta tgaatttctt ttttagttct aacgataacc gcttttacca
    12481 cttgaccttt tttaactttt ccatttggta aagctttttt aacagatgca acgattacat
    12541 cacctacggt agcgtatctt cttttgctac cccctaaaac cttgatacac attaattctt
    12601 ttgcaccgct attatcagca actgcaagtc ttgtaaaact ttgaatcatt actcaactcc
    12661 tgtagctaat acagatttta agcgaaatga ttttcttttt gaaagtggtc tgcattctac
    12721 tgcaacaaca gtatcaccca ctttaacttc atttctctca tcatgaatta gatatttttt
    12781 aaagcgttta acaatttttc tatatcttgg atgaaccact tttctttcaa ccaaaacact
    12841 tgcggttttt tcaccagcga ttttaacaac aacgccttga atttctcttt taaatgccat
    12901 tttctatcct tatcttaaag cgttaattgc tgtatttatt ctagcaatgt ctttttttac
    12961 ttggctaatc tcttttggat tagtaagttg cattgttttt agcttttgtt ttaaagtgaa
    13021 taaaagcacc tttttttctt ttagcattgt tgcaagctca gctgctgttt tatctttaat
    13081 ctcagtatat ttcattttgg ctctctcttg taacaaactt agttttaaat ggaagtttat
    13141 gcatagctaa agtcaatgct tctcttgcca tttcttcgct tactcctgcc atttcataaa
    13201 tgatacgacc tggcttgata ttcattaccc attcctcaac agcaccttta cctttaccca
    13261 tacgagtttc taaaggtttt tttgtcaaag gcttatctgg aaaaactcta atccaagttt
    13321 ttccttgtct tttaacaaaa cgagttaaag cgatacgcgc tgcttcgatt tggcgtgagt
    13381 taatgcgtcc tgcttcagtt gcttttaatg caaattcacc aaaagtaaat tctgttccac
    13441 gattagcata acctctgtta cgccctttca tcattttgcg atatttagtt ctttttggca
    13501 ttaacatgat tatttacccc ttcttgtgcg tcttggcttt ttagctggag cactttcttc
    13561 agttttttca ggttgcatac ctttgtgcaa tacttcacct ttaaagatcc atactttaac
    13621 tcctatgttt ccataagtag ttctagcttc tgcaaaacca taatcgattt ttgctcttaa
    13681 agtatgaagt ggaacgcgtc cttcaagata ccattctgtt cttgccattt cagcaccgcc
    13741 taaacgaccg gaaactgaaa ctttaattcc tttagcacct gctttttgcg caccttggat
    13801 tacttttttc attgctcttc taaaagcaat tcttttttca agttgagttg caacactttc
    13861 agcagcaagt tgagctgaag ctcctgcttt tctttcttct ttgatattga tatttacatc
    13921 tttaccgatt aaatcttgca attcttttct taaattatca acatcactac cttttttacc
    13981 gatgatgata cctggtcttg cagcaactac agtaacgcga agttttttag cagttctttc
    14041 tactaaaatt tggctaattc ctgcgtaata aagttttctt tttaagaaag ctctgatttt
    14101 gtaatcttca ccgatatttt ctactaaatt tgctttagtt ggaaaccatc ttgattccca
    14161 gtttctattg attcctagtc ttagaccaat tggattaact ttttgtccca ttagctttcc
    14221 tttttcactg ttgctttttt agtgcttgtt gtttttttag ctggagcttt tgttgtagta
    14281 gtttttttag ctactgtttt tttctcttca gatttcactt ccgcttttgc cacttctact
    14341 aaaatatgtg aagttggttt tctaatacga cttgcacttc ctctagctct tggtctaaat
    14401 ctttttaata ccgcagctgc gtcaacacga caacttttta caatcacttc gtttgcttca
    14461 aagccaccat ttgctactgc gcttgaaatt gcgtttgcaa tgtattttgc acctttattt
    14521 ggcataaatt ttaaactagc catagctaat tctgcattca tcccctgaac ttctctagca
    14581 atcaatcttg ctttagttgg agataatctt atgaatttaa ttaatgcttt actcatatct
    14641 tatcccttac ttaccaattt tcttttgcac agagccttta tgccctttaa atgtgcgtgt
    14701 tggagcaaat tcaccaagtt tataaccgat gtgattttca gtaatataaa ccggaatgaa
    14761 gcttttgcca ttatgaacat taaatgtaag tcctatcata tcaggagtaa ttgtgcttct
    14821 tcttgaccaa gttttaattg gtttattatc attagccttt ttagcagcga tgactttttt
    14881 cattacatga tcatcaacaa aaggaccttt ttttagtgat ctagccatct tactttcctt
    14941 ttcttcttga aattattagc ttatcgctag cctttttacg acgagttttc gcacctttgg
    15001 ttggtttacc ccacggagtt actggatgac ggcctgaatt tttcttacct tcacccccac
    15061 cgtgcgggtg atctactggg ttcattgcag aaccacgagt ttgcgggcgg atacctctat
    15121 ggcgatttct acctgcttta ccgatagtta cattagccca ttcttcattt ccaacttcgc
    15181 cgatacttgc catacattca gctaaaactt gtctcatttc gccacttgca agtcttaaaa
    15241 taacatattt ttcttcttta cccataagtt gtgcataagc acccgcagaa cgaatcattt
    15301 gaccgccttt acctggtttt aactcaacat tatgaacaat agtacccaca ggaatgtttt
    15361 taagtttcat tgcattacct ggtttaatat caagtccgct ttcagcagct gcaacgatat
    15421 caccaacgct taatccacgt ggttgaagaa tatatctttt ttccccatct ttataagcaa
    15481 tcaaagcaat tctacaattt ctgtatggat catactcgat tgcttctact ttgccttcta
    15541 taccgaattt acgacgttta aaatcaataa ttctgtaaag ttttttagca cccgcttctt
    15601 tatgacgact tgtaattctt ccatagctgt tacgacccgc gtgtgctgga agtttaacaa
    15661 gtagtgagcg tacacttggt ttagctgtaa tatcttcaga acttaaacct gtgatatatc
    15721 ttctacttgg agtatatggt ttataagttt taattgccat cttaagcctc cgtattttct
    15781 aagctaacac cttcaggtag cttaacatag aattttttgt aattgtttct ttgacctaaa
    15841 cgacctctaa aacgcttaat ttttccatcc attcttaagg aattgatgct ttttggagtt
    15901 acaccaaaat actcttttaa aaccgctttt aagcctgttt tagtcatttt tggcgaagtt
    15961 tgaataacta cgacaccttg ctcttgcaaa ttcaaacttt tttctgtgta aagtatagtc
    16021 tttatatcag taatatctgc cataattatc cctcttttgt aatagattct aacactgatt
    16081 tttccataat aacagcatta aatacagata ctaaataagc atttacttca gttacatcaa
    16141 ctacatagca atttgctaaa tttctgtaag ctaaaagtgt tttttcatct agtaaatctt
    16201 taacgattaa agcatctttg acgccaagtt ttttaatcac agcgtttgca tcttttgttt
    16261 taccactttc aatagccaaa gaatcagcag taaataacac acctttagct gctttatctg
    16321 ctaaagctct ttcaagcgcc aatctttttt gttttttatt tactttttgg aagtagtttc
    16381 tttcatttgt tggaccaaaa gcaaccgcac cgcctaccca aacgttagtt cttgttgaac
    16441 ccgctctagc accgccacga cctttttgtc tccaaggttt tttaccacca ccacttacat
    16501 cacttctacc tttagtatga gctgtatttg ctcttaaact tgcaaggtaa gattttacat
    16561 acaagtaaag attgtgtgga tttacttccg catattttga aggtaaatca agttcacctg
    16621 ctttttctaa tttatcattt aaaacaacta ctttactcat tttgcaatcc ttattttacc
    16681 catggcacca ttataacctg gtactgcacc tttaactact aaaattttat tttcagcatc
    16741 ataagataca acttcgtttt taatggtcac tttagtattt ccatagtgtc ctgccatttt
    16801 catacctggt tgaacacgac ctggccattc tctattacca atagatccat ggcgtctatg
    16861 aaatctcgaa ccgtgacttg ctggaccccc tgcgaagtta tgtcttttca taacaccgct
    16921 ataacctcta cctttagtgt taaagcttac ttttaaaatt tttgcttcat ttaatggagt
    16981 ttcatctaaa tctcctgctt cagtatttgc tacttctaaa gtcgcaaatc tattgtattc
    17041 tgcagaaaga ttgtattttt tttgttgtcc tgcgacacat ttattacttg ctttaccttt
    17101 tggatatgct actaaagcct ttccgccttc aacttcacat acttttgcat ttacaactct
    17161 tagtaaagtt acagcgatac ttggattagt aattgttctg ctcattccaa ttttttctac
    17221 aatatattcc atatcttatc cttacttacc catagctctt acttcaacgc ttacttctgg
    17281 cgctaaatca agcttcgtta aagaatcaac tgtatctgga gtcgctgcta ctatatctag
    17341 catacgcgcg tgaattctta tttcaaactg ctcacgagaa tctttgttaa tgtgtggaga
    17401 ttttaaaact gtatagcgtt tgattttagt aggcattggt atcggacctc taatatccgc
    17461 acctgttctt ttaacagctt ctacgattgc tgcaactgtt ctgtctagta ctcgatggtc
    17521 ataagctttt agcttaagcc taattctttc cataatattt cctttaaaaa gaactcgtta
    17581 gttaaaaact aaccaaattt ataaaaattg aaatgagagt atataaaatc ttgttttcaa
    17641 agtcaaggaa tttgatgaaa tttttctatt attttccttt taaaaaggat aaaaatagaa
    17701 tttttagaat ttaaaaatta tcattatttt ttaaattttt gtatataatg gtcaatatct
    17761 tatttcatta aattttaaaa aatctcttaa tttttcatat tcgccatttt ctaaataacg
    17821 atgttttccc gccttcaaca taccaagatc taaagcccca aaagcaacac gcttaagatc
    17881 catgacttca agatcaaaat gtccaaaaaa gcgtctaagc tctctatttt taccttcatt
    17941 tataaccact ctaagcttag tatagcctcc acttgatcca aaaatttcaa agtctataaa
    18001 aggagcaaaa ctcatagagg taattttagt ttttgcatgt gcgccttttt tttcattttt
    18061 aatctcaagt ccattttgca tggcttcgat gacttgtttg ctcaccgtgc ctttaacttt
    18121 aaggtagtat tctctttcta aatcgctatg cattaaagca tcggcaatca caggagaatc
    18181 tgtaagcaaa agtaagcctt cacttgcata atccagccta cctacgctaa gccaagtact
    18241 aaattgtctt ggcaaggtat catatatagt ttttcttcca cgatcgtctt ttttactgac
    18301 aatttcacct ttttgtttat ggtagattat cacgctaaat tgcgttcttt tttgtactct
    18361 tttaccttta acaaaaactt tatcatcaaa tttaacttca tcgcttaaaa gggcaatttt
    18421 gttgtttatt tttactaagc cttgtttgat aagttcatcg gcttcacggc gtgaatagcg
    18481 ggtgttatgg gatataaatt tattaattct catttgatct tccttaaaaa gggcgttttt
    18541 gccctttttt acattacaaa aatagttgga actatggttg ggtatttttt aatctttcta
    18601 aagatgtgtt ttcttaaaac ttggcggatt tgattttcta aaaatcttgg atcattgagt
    18661 acttcatctt taacattgat gaaaaattgt cctaaaactt cagccatatc tttgctaaaa
    18721 gcatgatcgt gtttgtcagc tactagccca tagctaaata ctcttggttt gttgatcagt
    18781 gtttttgtag ctttgtcaat ttgtgcgata ataactacta taccactatc tgcaagtttt
    18841 tggcgatcta taactacatc atcggcgatt tgtttgttga tttgattatc tacaaaaact
    18901 ttacctgttt ttacggtttt tatgcgtttg acatattttt ggcaaagttc tacttgatcg
    18961 ccatcactca taagataaat atttctttca gggataccgc acttcatcgc tgtttctttg
    19021 tgtttggtga tgtgattgta ttctccatga actggtagga aaaatttagg cttagtaagg
    19081 gttagcataa gcttttgctc ttctatacta gcgtgtccgc ttacatgaat ttcactaaat
    19141 tcttgatacg ctactttagc tcctgctttt aaaagatagt caagcaccgc agaaacactt
    19201 gcttcatttc ctggtatggc tttagctgaa ataatcactt gatctgtagg tttgattttt
    19261 ataaatttat gctcatcagt tgccattcta taaagcgcac tcatggtttc gccttgactt
    19321 cctgtagtta cgataagcac ttcattgtct ttatatttgc ttacttcatc agcatcgatg
    19381 aaaatttttc tatcaagttt gatgtagcct aattccatag tggtataaag atttctttcc
    19441 atagaacgac cgatcacaca aacttttcta ccgtatttta aaccataagt gatagcttga
    19501 taaacgcggt ggatattaga actaaaagta ctcatgatca ccctgccttt ggtacgtgca
    19561 aagatttgat caaaagttgg ccctacggag ctttcacttt ttgtataacc ttctttgtac
    19621 gaatttgtac tatcgcttaa aagacataaa accccttctt ctccataatg tgccaaacgt
    19681 cctaagtctg ttggatagcc atcgattgga gtttgatcaa ttttaaaatc acctgtgtgg
    19741 ataatcgttc ctgcttttgt tttgatcgca agcgctgaag catcaatgat agaatgcgtg
    19801 atgtggatcc actctatatc aaattcgcct atctcataaa cacggcgttt ttctacaggg
    19861 cgaaaccatt tgcgttctgc ttttaagcca tgttcttcaa atttgtttga aatcattcct
    19921 aaagccaaag gtgtagcgta gataggaaat tggaattctt taaagaaata aggcactgca
    19981 ccgatatgat cttcgtgtgc atgagtgatc actataccac gaattttatc tttaattttt
    20041 cttacatagt caaaatcagg gatgataata tctaccccat gcatagttcc atcaggaaaa
    20101 ctcataccta tatctactat aattgcatct ttattggttt caaaaacact gatatttcca
    20161 ccaatttctc ctaaacctcc taaaggagtg atgcggattt tatgctcgct agaattatta
    20221 tattttaaag ggtgtaagcg gttttcatgt gaaatacggt tagcttctat gcattctgca
    20281 agagcgattt gccaatcttc attacctgtg agttttgaag gaagattgcg atttttcttc
    20341 ttttttttct cagttttatt ttctgagttt tcagaatttt ccttgttgga attttgatca
    20401 atttttggag tatcattttc attttgcaaa gaatcagcta atttttttct acgattttta
    20461 tatttatagc gtttattgtt ttttgaattt gagttcggat tttgttcgtt tttatttatc
    20521 tctttgtttt cgtccatatt catcctttaa tttgtcataa attttaaggt ataaatcaac
    20581 gcaaatttca tgtggtctga tgttttcttt taagccaaga gtgcttaaaa cttctaaaac
    20641 ttttgcttta tatgttttta aatttcctaa gagttgtttt ctaggagctt taaaacaatc
    20701 ttttagaaaa tttttgaaat tttctatttc gcaaagttca tcaaaatcct tagttttaat
    20761 caaactcatc accgctgaca taacttttgg tggaggatta aaacattgtg gatcaacatc
    20821 aaaaagtatt tttctttcgc aaatcattgc acttaaaaca cctaaggaag aaaactcact
    20881 atttccttct ttagcgcaga atttttcagc catttccctt tgtgccatta caataagccc
    20941 tagacaattt ttatcttcta aagcttttaa tataatgtga cttgcaacat aataaggcaa
    21001 atttgcaacc aaaaaatatg gtttttcatc aagactagga ttaaaagctt cgcttgcgtc
    21061 ttgatggatc aagttaaatt ttccacattc aagttctttt tgaaatttct tttttaaaat
    21121 aggtatgaga tcattatcga tttcataagc ttttacttga gaaattttta aaagttcttg
    21181 cgttaaatca cctaagccag gcccaatctc aatgatattg ttcatctctt tgggtatggc
    21241 ttggatgatt tttgctaata cgcttttatc gattaaaaaa ttttgtccgt attgtttttt
    21301 tgctttaacc ataagaaata attttatcta aaaattctta attaagtctt tttaggtaga
    21361 attatttttt gtaaaaattt cataaggatc aaaatgatta tttgtgcggg tggaaatgaa
    21421 aatttttctt ttgcaaaagc tataggcata ggtttggttg aatcagcttt tcatttgagt
    21481 caactttgct tcaaagaaaa accatcaaaa cttatattta taggaacttg tgggctttat
    21541 gataagggag agattttaga aatttataga agttcgcacg cttttaatgt agaattttct
    21601 aaaatttcac atgcatttta tactcctgca aaatatgaaa tttgcttaga aaaagaaaat
    21661 gtttctcgtg aaacaataaa aatcaattct tcaaattata tttgtcaaaa ttcaaaagcg
    21721 gcaaaagaat tttcaaaatt aggttttttt gcagaaaata tggaagcctt ttctgttttg
    21781 agcgtagcta aaaatttaaa tattgatgca gagtgtattt tgtgtgcaac aaatttttgt
    21841 aatgaaaacg ctcacgaaga ttttataaaa aatcatcaaa aggcaaaaga aaacttagaa
    21901 gaatacttaa aaaaatatca ttatatttaa aaattcaaaa aggaaaataa ttttgaaaga
    21961 gcttgttaat attttagatt ttttacctga agaattagga gaaaaaatca aaccgatgtt
    22021 tcgcgtgaaa caaatttatc aatggattta tcaaaaatat gccaataatt tttccgatat
    22081 gtcaagtttg ccaaaagatt tgcgtttaga acttgcgcaa aattttcatt tttctcctgt
    22141 aaaatgcgtt aaaaatgagc aaagtaaaga tggaagtata aaatatcttt ttgaacttat
    22201 cgatggttta agggtagaaa gtgtgctttt gcctatgaaa gaagaaaaaa tagacgcaga
    22261 aggcaaaaga atttctcatg cgagatatac tatctgtgtt tcttctcaag taggttgtaa
    22321 aagtggatgt agtttttgtc ttactgccaa gggtggtttg aaaagaaatt taagtgcagg
    22381 tgagatagtc ggacaaattt tatggatcaa aaaacaaaac aatatccctt atgaacgccg
    22441 tgtaaatata gtatatatgg gtatgggcga gcctttggat aatcttaaaa atgtttctaa
    22501 agcggtaaaa attttagcgc aaaatgaggg acttgctata agtcctcgcc gtcaaaccat
    22561 cagtactagc ggtttggcaa aacaaatcaa agaattaggt caaatgaatt taggtgtttt
    22621 acttgctata tcattgcatg cggttaatga tgagcttcga accgaactta tgcctatcaa
    22681 taaagcttat aatatcgctg cgattatgga tgcggtgcgt gaatttccta tagatcaaag
    22741 aaaaagagtg atgtttgaat atcttttaat tgatggtatc aatgataagc ttgaacacgc
    22801 taaagaatta gtcaagcttt taaatggcat taaagccaaa gtgaatttaa tactctttaa
    22861 tccacatgaa ggaagtttat ataaacgccc tagtttagaa aatgcgatta aattccaaga
    22921 tttactaagt aataaaggtg taacttgtac tataagagaa agtaaaggac ttgatatctc
    22981 agctgcttgt ggacagctta aagaaagggc aaaagaacaa tgacgatgtt agatattttc
    23041 gaaatcattt ttataacaac tgttgtaatt ataggttttg gtggaattgt ttttgtagta
    23101 acaaaagaaa aaaaataatt attacattta atggtgtcaa gggggagact tgaactcccg
    23161 acctccggct tatgagacca gcgctctaac cagctgagct accctgacta aaaataaaaa
    23221 tataattata ctacttttta ctaaaaattt tctgattttt aaaaaaataa ttttattttc
    23281 aatatttaaa aaatttcttt atttttaaag cttttataga tataatgaac gctttatttc
    23341 atagacaggt gtccgagcgg ttgaaggagc acgcctggaa cgcgtgtaaa gtgcaagctt
    23401 tcgagggttc gaatcccttc ctgtctgcca tcaaataaac tttaaggcaa actaagttat
    23461 aatacaaact tcatttgggg cattagctca gctgggagag cacaacgctg gcagcgttgg
    23521 ggtcagcggt tcgaacccgc tatgctccac catatggttc cgtagctcag ctggtagagc
    23581 actaccttga catggtagtg gccgttggtt caagtccaat cggagccacc atcacccttc
    23641 cttatacaaa ggattatcat gcaaaacact atcatacaaa aagccgtcaa taaagattta
    23701 aattctatac ttgaaatcac aaaagatgct ttaaatgcta tgaaaactat gaattttcac
    23761 caatgggatg agaattatcc aaatgaaata gtttttcaag aagatataca agcacaagaa
    23821 ctttatgtgt ttaaagaaaa tgatgaaatt ttaggcttta tctgtatcaa tgaaaaattt
    23881 aaacctgaat tttacaaaca agttattttt aacaaaaatt atgatgataa agccttttat
    23941 ctacaccgtt tagctgtcaa acaaaatgca aaaggcaaag gcgtggcaca aaaactttta
    24001 aatttttgcg aaaattttgc cttggaaaat cacaaggcaa gtttaagagc agatactcat
    24061 agtaaaaatt ttcctatgaa ttcgcttttt aaaaagcttg attttaattt ttgtggaaac
    24121 tttgacatac ctaattacca agatcctttt ttagcttatg aaaaaattct aaaccaaaaa
    24181 gctttttgag tttttttcat aggctttgat ttgtgcttca tgttttaaag ttaaagctat
    24241 attatcaagc ccttccaaaa gacaaattct gtgaaaatca tctaaatcaa aagaaaaaat
    24301 cttatcttta aaaaatactc ttttttccaa caaagaaatt tctatatttt tatcttggga
    24361 tttttttaac tcatcaacta tttccaaaac ctcatcttta gcaagttcta tagtgagcaa
    24421 accgtttcct aaggcattgt ttttaaaaat atccgcaaaa gaaggtgcga taatagctct
    24481 aataccataa tcaaccaaag cccaaggcgc atgctctctt gaagagccac taccaaaatt
    24541 ttcaaaactc accaaaatag agctattttg atattctttt ttattgagat taaaatccat
    24601 atttaaaaca ctttctttat catctaaata acgcaaatca tggaacaaat gcttgccaaa
    24661 accttgctta gacactgcaa gtaaaaattg cttaggtata atttgatctg tgtctatatt
    24721 ggcatattct aaaggacaag ctataccttt gtgtataata aatttttgca tattaaactc
    24781 ctaaatactt tctattatca caaataacac cttctatggc acaagctgct gcacttgcag
    24841 gactcatcaa atgagtgata gaacctttac cttgtctgcc tacaaagtta cgatttgaag
    24901 ttgaagcaac tctttgacct gaatttgctt tgtcatcatt cataccaaga cacatagaac
    24961 accctgcata tctccactca caccctgcct cgataaaaat cttatcaagt cctaaatttt
    25021 cagcttcttt tcttacttgc attgaaccag gcacgattaa agctttaaca tttttatgaa
    25081 ttttgcgccc ttttaagata tcagcagcta ttttaagatc ttctaaacgc ccatttgtgc
    25141 aagatcctat aaatacaatg tcgattttta ccccttctat aacttgatct tgctctaaat
    25201 ttacataata taaagcatca agcaaagatt tttgctcgct ttgattttta aaatcactta
    25261 tttttggaat tttttcatct atgccaatca cttgcgaagg atttgttcca tagctaattt
    25321 gtggttttat cttgcttaca tctagagtaa tactctcatc atattttgct ccttcatcac
    25381 ttcttaaact cttccaatac tcacaatact tttgaaattc ttctccttta ggtgcaaatt
    25441 cctttccctt aatatactca aaagtgatct catcaggagc tatcatacct actttcgctc
    25501 caaattctat agccatatta caaagagtca ttctagcttc catacttaga tttcttataa
    25561 gttctccgca aaattctata gcatagcctg tgccttttgc tgtgccgtat tgtgcgatca
    25621 aatacaaaat caaatcctta gcataaacgc ctttttgaaa ctgcccttta cattcgattt
    25681 tcatagtttt aagtttggct tgttttaaag tttgcgttgc catgacatgc tctacttcac
    25741 tcgtgcctat accaaaggct aaagctccaa aagccccatg tgttgccgta tgagaatccc
    25801 cacaaactaa agtaacccca ggtaaagtaa agccaaactc aggacctact atatgaacta
    25861 tgccttgatt tttatctcca agtcctaaaa gccttactcc aaattcctta gtattttgca
    25921 tcaaagttgt aatttgctct tttgccatat cagaacaagc atttaaatcc acacttttag
    25981 ttgaaacatc atgatctatg gtagccaaag ttaaatccgc tcttgccatt ctacgcttag
    26041 ccattttaag ccctgaaaat gcttgagggc ttgttacttc atggattaaa tgtctatcga
    26101 tataaagtat aggaagttcg tttttgcctt cataaaccac atgagcatca aagactttct
    26161 catataaagt tttagccatt attattctcc tttaaaattt ctaaaataca atcccccatt
    26221 tcatcggtat ttaaatacga cttagcattt aaatccttag tcatttttcc ttgtgccaat
    26281 gctaaagata tagcattttc tatatcctgt gcggcttgtt cttctttgaa actatacttt
    26341 aacatcaaag ccgcacttaa aatttgagct atgggattgg ctatatttaa atgagctata
    26401 tcaggcgcac ttccacctgc tggctcataa agtccaaaac ctttatcatt caaacttgct
    26461 gaacttaaca aacccaaaga tccattaatg gcagctaact catcgctcaa aatatcacca
    26521 aaaagatttg aacaaagcat aacatcaaaa atgctaggat tttttacaat ctgcatcgca
    26581 gcattatcca catacatata ctctaagctt atatctttat aatcttttgc aacatttgcc
    26641 accacttctc gccacaaaat agaacttgct aaaacatttg ctttgtcgat taaatgcact
    26701 tttttctttc ttattcttgc actttcaaaa gcaatatgag ctatcctttc tatctctttt
    26761 ttagtgtaaa tttcagtatc atacgcactt tctttaccta aatcctgctt gccaaaataa
    26821 atcccacctg taagctctct aacacataaa atatccactc ctttttggat aatctcattt
    26881 tttaaaggtg aagcatgagt taaactttca taaattttac aaggacgcaa atttgcaaac
    26941 aaattaaaat gctttcttaa aggcaaaagc gaggctcttt caggtctttg atctatgggc
    27001 aaattatccc acttaggccc acccacagag ccaaataaaa tcgcatcact ttgctcacaa
    27061 agctttaaag tttcatcact taaagccact ccataagcat ctatacttgc accgcctatt
    27121 ttagcttcat taaattcaaa actaaaattg tatttttgcg cgataaaagt taaaattttt
    27181 aaagcctctt tcattaccaa aggccctata ccatctcctg ctaagacagc tactttataa
    27241 gttttcatgc cattttcctt tcttctactt ttaaagagcg ataaatcgca ttgtaagcac
    27301 tcacaaaagc ttgtgctgaa gcttctataa catctgttga aattcctttt ccatggaatt
    27361 ttctcccttt aaattccaaa tccacatcca cttgtccttg agcatctacc cctgaacttt
    27421 ttgcattgat actataagct tttagcgcag gctttaaatt cgttatccta gcaatgcagt
    27481 taaaaactgc ttcaacagga ccatttcctg tgcaagcttc agtttttaac tcttctttaa
    27541 tacgcataca aacacaagca gttgggatat tgccactaat cacgcttaat ttttcaagta
    27601 taaatttatt ttcttcttca ttttcatagc ttaaaaacat caaagcttcc aaatcataat
    27661 catacacttg acccttttta tccgcaaggc gtaaaaaacg ctcataaaca tcatctaaat
    27721 tataagtatt ttcatcatag cctaaatttt caaggcaagt ttttatcata gcccttccac
    27781 ttcttgccgt cattaacata cgattttcat gaattcctat ggcactaggg cttatgatct
    27841 cgtaagtttg cctattttta agcactccat cttgatgaat gcctgaacta tgagaaaacg
    27901 cattgctacc cactatagct ttatgcgaag gtatgctttc attagtgata gctgaaacta
    27961 attttgaagt tttaaagata ttttcacatt taatatcagt ataaaaacct tttaaataat
    28021 ctttcctagt ttttatcgcc ataaccactt cttctaaagc acaattaccc gccctttcgc
    28081 caagtccatt tatagtgcac tctatctgtc ttgcaccttg taaaatagca cttaaactat
    28141 tgcccgttgc catacctaag tcattgtgac aatgcacaga aatgatagct ttgtctatat
    28201 ttggcacttt gttaaataaa attttgatga tattagcaaa ttcacttggc aaggtatagc
    28261 ctacggtatc tgggatattt atagttttag cgcctgcttt tatcgcattt tccaccataa
    28321 aacaaagatt atctatcgga gttcttcctg catcttcgca tgagaattct acatcatcag
    28381 tataagatct tgctcttata atcgctcttt ttgccataga caaaatttca tcaaaatctt
    28441 tttttaattt atcttgcata tgcaaagtcg aagtggctat aaaagtatga attctaaaat
    28501 gctttgccac ttttaaagct tcataagcca tatctatatc tttatccaat gctctagaaa
    28561 gtgcacaaat agttgagttt ttaaccttag aagcgatctt ttgcaccgct ttaaaatccc
    28621 cttgtgaaga taccggaaaa cctgcttcta taacatctac gcctaaattt tcaagcgcta
    28681 aagcgatttg taatttttga ttgataccta aagaactgcc taaagcttgt tctccatcac
    28741 gcaaagtggt atcaaagatt atgattttat tatctttcat gatttaatcc tttaaaacca
    28801 aacaaactaa atgaattaaa aattcaaaaa cttaacaaca atgattaaaa attaaaaatg
    28861 taaaaaatga ttaaaaataa aattgagttt tagagtgaga gttgcagtag cagattaaaa
    28921 gtattgtctt tacttttttg ttggactgaa ttcgaaattt caaaaatttg tttcatcttt
    28981 tcctcctttg ttaaaattaa tacttaatgt atcatatttt tagtaaatgt gtttgtaaaa
    29041 ttcttaaatt aagaaaatta ttgatataat tgtaatttta agtaacaaaa aggaagttga
    29101 tgttaaaaga actcttagaa attaaaaaag aaatggaacc tgttatccac gaagccaatg
    29161 tgaaattaaa tgtcctagct cgtgaagtca tagtccgaaa aaaagaatac gaaatttatg
    29221 ggcctatggt agatcgtgtt tatcttgata atgccattta tgttaaagtt atgtcaagtg
    29281 gacgcgatgt aaaaacagac aatgtgacta taaaaaatgg tttttatatg gtttttgttg
    29341 cccctgaaaa agaaagtaca aaagatatca aaaataaact caaagtagct tatgaaggac
    29401 ttgataacaa atttatcgct acacttatac gatcttgcca acgctttaaa gagatcataa
    29461 acaaaaccca agctacactt gctaaagctt ctaaaatgaa tgtggtagta aaaacgaatt
    29521 taggtgaagc aagtgctgct ctaaaattta acatcactat agaatatact aaagagaatc
    29581 aaaaactcac tcgtgaaaat tcaaaatcag caggaagttt cagagatact aaaacttata
    29641 tcaatcttgt agtagaaaaa aatacagaat ctcaaatttg cgaaaaacta cttgatgatg
    29701 ttgaaaaata ctttatcggt ggaggttgat ttcattaatg caagttataa aaacttgcat
    29761 tagattaaaa tttataatta tatcctaaat atacaccata atttgtttgt ttaggatcgt
    29821 aaaagtttga acccacttta ttttgataaa aatttctaga attataatga atttgctctg
    29881 ctttaaagcc taattctatt tcattatgtg gtgtcaaatc atataaagca cctattttcg
    29941 ctccataaaa ataaccgtca aaattttgcg acaaagataa aaagcttgtt tttaaggtaa
    30001 gatctgttct tgcatatcct ccatacacac ctaaaacagc tctggttttt tcaaaaagct
    30061 taggagtaaa atcataacct gttaaaaatt tatgtgtagt aaaatcacct tcgatttgaa
    30121 ttttaggagt tttgataaaa tcactaaatt catcagaata attataacca gcataaattc
    30181 tatgattttc atttaaacga tatccaagtt ttagaccaaa cgatggtata ttacctgaaa
    30241 tatctccatt aaaattttgc tttgtattct tatgttttaa ctcacttttt acttgagcat
    30301 gcatccaagc tgcatcagca cctataaaaa aaccagaatt ctcatctgct aaagccaaat
    30361 ttgaaaacaa agtagcactt gcgataatgc ttaataattt tttattcata acctaactcc
    30421 ttataataaa attcgatcta aaaaatt
//
LOCUS       DAPIYB010000008        29096 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.008, whole genome shotgun sequence.
ACCESSION   DAPIYB010000008 DAPIYB010000000
VERSION     DAPIYB010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 29096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29096
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.008"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..379
                     /locus_tag="RJ318_000292"
     CDS             <1..379
                     /locus_tag="RJ318_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HDV7430194.1"
                     /translation="LSLNADIIISADNLPNVSKEFLQHNFKAPIGIVQKDKNSYEVYL
                     SDGTELEFDIDGAWKEIENKAFPFDLDFLPQNLANIIKNEFPNTKAREIERKINHYKI
                     KLDNDIKILIDFNGTILYKEFDD"
     gene            complement(388..2004)
                     /locus_tag="RJ318_000293"
     CDS             complement(388..2004)
                     /locus_tag="RJ318_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HDV7430195.1"
                     /translation="MKNKKIILASFMVLCMLLGILYFKNEPKYIDENLYQSLLSQNLI
                     QKAVIDKDEIWLKAEGENYVIIKDGIDIKTLLSKVPVEVKKDNTLWVFFVLLIFIIAL
                     FISLGYFARKKELVKYPISNKNQNHTQAQNSNINLESSHIKPVISNITFNDVAGVDEV
                     KMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQSG
                     SSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNVERDSTLNQLL
                     TQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMKD
                     KNNNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVLNKVLLGKK
                     KILSFNNEEKKIQATYQAAKALSAYYFDIGFEKITLIEDRFKEYEHNIRSKSELINRI
                     KVYLAGSRAMRLIYNESYTNSQDDFLKIKELLDYMLSFDMLKESNLSEQKKEMDEFLN
                     SMKDKILKLSELLLEKEKIEYDDVKDIMQV"
     gene            complement(2008..3258)
                     /gene="mtaB"
                     /locus_tag="RJ318_000294"
     CDS             complement(2008..3258)
                     /gene="mtaB"
                     /locus_tag="RJ318_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HDV7430196.1"
                     /translation="MKEKVFFKTFGCRTNIYDTELLKSYVKDYEIINDENKAQIIVVN
                     SCTVTNGADSGIKSYVNTMQKKGIKVILTGCGAVSKGKELLDKKQVFGVLGASNKDKI
                     NEFLGAKTSFYELGNLNFIDKDIVCEYENHTKAFVKIQEGCDFACSYCIIPSVRGKSR
                     SVDEKALLKQVEILGANGYSEIVLTGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRL
                     GSLEPAQLDESFLEILDEAWLERHLHIALQHTSEKMLRIMRRRSHTDNDLKLFNTIAS
                     KGYALGTDFIVAHPGESEELWQEALRNFKEFPLTHIHAFIFSPRNNTHSATMKDVING
                     TLAKERLNTLKSIVEKNNYEFRKKNQVSLEVLVENQKDGFFEGYDQFFNKIKIKSDKD
                     IAKEWIVISEYEVQEKSNFTNLKG"
     gene            complement(3255..4826)
                     /locus_tag="RJ318_000295"
     CDS             complement(3255..4826)
                     /locus_tag="RJ318_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDV7430197.1"
                     /translation="MKKIIILTFFVVFAFGDVNRTIINNINEKINTLNTVISASIWNI
                     RYENFIKYQDINDELIILNLNLKKTSDIHQQEELKRKIANLEEQLNLLKEYKDLNFAQ
                     SLSAPDNIETLSKLTNPLAIIGAFSHIKKLKGEKEEYIFKFNDFKNLVDKIREKNSEL
                     KELVELKPSVENIEALKASDKKLEEFEQALNFASVSYSVYEKKIDEELSRVSAEIKVQ
                     SLRAVNILVAIVIVIAIAFMLKFIAKKYIKDSERYYTATKIINFININIIFLILLFAY
                     IENITYLVTILGFASAGLAIAMKDMFMSMLGWCVIIFGGSFRVGDRVKVFQNDTTYIG
                     DIIDISFLRITLYEELTLETYNKNRRSGRIIFIPNNYVFTNLLANYTHHGMKTVLDGI
                     DISVTFDSNLDKAQEIVENIVTRHAKGYTELARKNIARLQHEYSIKNPKVEPRFFMFF
                     EHWGMRISAWYMTNAYAALVLRSTISKEIIKEFNKHKDIKIAYPSQNLYLGNLNQNHF
                     EQHHENMYFHARNKD"
     gene            complement(4823..5878)
                     /locus_tag="RJ318_000296"
     CDS             complement(4823..5878)
                     /locus_tag="RJ318_000296"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDV7430198.1"
                     /translation="MQVEVKLKENAYKVYIDELEELEFDSKVFILSNPKISGLHLKTL
                     LSKIKAKEIFIATVKDGEEYKNLSTMEEILNQMFNSKLDRKSVLISFGGGVISDMGGF
                     AASIYQRGIDFINIPTTLLACVDAAVGGKTGVNNNFGKNLIGTFYQPKAVYCESFFLK
                     TLSSRELAAGMAEFIKMAAMFDYSILDFIEKIDEKSFLNATCENEIFTQIIVKSIELK
                     SRVVEQDEKESRLRMLLNYGHTFAHVIENFTDYKLYLHGEAVAIGMVMANQLALNLGL
                     LDKMQSQRIKDILLKFGLPISYKINNVDEFYEAFFMDKKSSNKKINFVLASPLGKGLI
                     KGDISKEDIIATLREFQ"
     gene            complement(5924..7324)
                     /locus_tag="RJ318_000297"
     CDS             complement(5924..7324)
                     /locus_tag="RJ318_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG3400 family protein"
                     /protein_id="HDV7430199.1"
                     /translation="MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNI
                     SSEYIDLHYFDPTSTARLENIMSKDFKQAFIYMQDEFETKKSYEALRSLNPNLEIEIM
                     DFWGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFA
                     YRHISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKA
                     GQFPMPFGSNVFALIDMKNMNQNMQERVLDTTLKLTQKSNAKRFFIHVINPKLGVMYE
                     KLKKLSEDKEGVFFDYFNTDFKQISMWLQNNDIGLVVTDIKNFEKEKQAFFDLKIPIM
                     KVGEASFDELKEAIILSADESELENNANVITDLSKQLDFGVILYYYNPNSQNTTDMEE
                     YFRSLSKLYDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFARNLSTNLNR
                     HYYKMRQNYQLFIPVE"
     gene            7354..8475
                     /gene="tgt"
                     /locus_tag="RJ318_000298"
     CDS             7354..8475
                     /gene="tgt"
                     /locus_tag="RJ318_000298"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDV7430200.1"
                     /translation="MEFKLKHKDGMARVCEITTAHSTFLTPVFMPVGTVGAVKSLDAN
                     DMKNELDAKIILANTYHMYLRPTSKVVKDFGGLHGFTKFDRSFLTDSGGFQAFSLSKN
                     SKHFNEGIEFKSHIDGSRHLFTPKSVLDTQYDFNSDIMMILDDLVALPATKERVKISV
                     DRTILWAKEAITYHKNMQNKGIGIGQNIFGIIQGGTDYEERKRCALSLNEMPFDGLAI
                     GGLSVGEENALMYETVQNLNPYLDENRPRYLMGVGTPEDLVENVERGVDMFDCVMPTR
                     NARNGTFFTSFGKFNIKKAEFINDHEVIDSTCSCYTCRNFSRGYLNHLFKAKELTFFR
                     LASLHNLHYYLELARKMREAILNNSFTQFKRNFYHLRGK"
     gene            8477..9244
                     /locus_tag="RJ318_000299"
     CDS             8477..9244
                     /locus_tag="RJ318_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HDV7430201.1"
                     /translation="MLELHENLKKILQAKNLETFYSEIYGQKIFVYVGLNLETWLFND
                     EKIYKLQDGEFKLSSIEEFSNFIKSILEDFKVQNTHFQNLLEHKEGIILKGGFVKNFY
                     KKSFVLRQKINKNLKQINLLSEAFNLLLSEQAQYKKHLKILNLSISILSKNTKEHLAR
                     IDTLYTLTNAIKNEKMNKSIYLLSILSSIFLPLNLIVGFFGMNTNNLFFKDSPYGTLY
                     IFSLICCILIVGFIFYYSKKTKEFDLDEGKKAKKQTK"
     gene            9297..9373
                     /locus_tag="RJ318_000300"
     tRNA            9297..9373
                     /locus_tag="RJ318_000300"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9331..9333,aa:Arg,seq:gcg)
     gene            complement(9376..9825)
                     /locus_tag="RJ318_000301"
     CDS             complement(9376..9825)
                     /locus_tag="RJ318_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430202.1"
                     /translation="MVIFCAALALLLFLGVIAYLITSDGKKTIKKQKTSQKQHVAEKT
                     KKFDTDLDKMIIAASDVKLTDIELKELAKLYVQTHKLGSKTSKELDEAAKKKLEFVSA
                     LAANINASAQTVSYLNKELKKIYGSYKKEIDAYEHMGLAKRKIKEDK"
     gene            complement(9841..13086)
                     /gene="ccsA"
                     /locus_tag="RJ318_000302"
     CDS             complement(9841..13086)
                     /gene="ccsA"
                     /locus_tag="RJ318_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDV7430203.1"
                     /translation="MKNIIKSIGNLRVSVVLFLLFALFCALATFIESAYGTPTAWAMV
                     YDTFWFEYIQLLLGINLLCGMFRYKMFGLKKLPLMIFHISFLFILVGSAMTRYAGFEG
                     ILPIREHTQNSLIESSKTSLRISAIKDGERYSAVNDRYIGNLPFANSFKLKLNLGDDQ
                     AVLKYKDLILNAHYTYKENNNSDPLLVLMLSQKGSQGVDVKFEKGEVKNIEGVNFAFM
                     NDNVKAPFVKIDENLTLSSSENLHFLSMLDGQNLDLKIGEKANAKERRLYEINDISFV
                     VKAASLHAQEALEGSNRPQDESFWLWFKSAWLEVGRTMLISTFGEPQNWKNSLLLHFK
                     DFALSNENKNLELTGSNALKLELSYKNESKEFYIFEYNKPIMIELADQKFFISWALSY
                     EQLPFDIYLRDFVLDRYPGSMSPASYASEITVKNNNENFDYRIFMNNVLDYDGYRFYQ
                     SSYDQDEKGTVLSVNKDPGKIPTYIGYFLLCLGMFMNFLNPHSRFRTLARLINKDTLK
                     HTSVIIFILLLSFGSEKTFAQDLNSTLPVVNTNHAKALATLIVQKSADGRMVPFDTLS
                     REILEKIHQSDSYKGQNSNAVMLSMLVDVDKWQLEPFILMPQNQAVRDAIANILEIPS
                     AKYIAYKDFFDENNRYKLQKYVENANRKNPNARGVFDKEIIKLDERANVVNLVFSGEL
                     FKFIPVQNNPNNVWLAPFSAVTTLKGDEGHIVLALIQNYFSAVENAFKDGNWIRADEG
                     LKFIKEYQEKIGYKVMPSKTKVEMEIFSNKAEIFVKLAPVYLIAGFLLLILVFSKMVV
                     PNLKISFIFKVVYVLNVLAFVIHTVGLGLRAYLSGHAPWSNGYESMVYIAWALSLSGI
                     FFSRKSPIALSLTSILSGVVLMVAHLSEMNPQITNLVPVLNSYWLSIHVSVITASYGF
                     LGLCALLGIFTLFLMCFLKKDGKYNLNILRNITEATRINEMAMIFGLCLLTVGNFLGA
                     IWANESWGRYWSWDSKETWALVSILVYAAILHLRMIPKYCNQFVFALWSMFAYWVIIM
                     TYFGVNYFLTGLHSYAAGEAAQIPNYVYWGFALMVVLAFFARRKRNFVGKL"
     gene            complement(13104..13799)
                     /locus_tag="RJ318_000303"
     CDS             complement(13104..13799)
                     /locus_tag="RJ318_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7430204.1"
                     /translation="MLIVKDLHVYYGLIEAVKGIDFKVETGHIVSLIGSNGAGKTSTL
                     NALLNSVKRTGEVNFLGYDTKRHLTHTLVQKGIALVPEGRRVFINLSVEENLKIGAFN
                     NAENYEHLREQMYKLFPRLASKKHALAGTLSGGEAQMLAISRALMSEPKLLMLDEPSL
                     GLAPKIVGEVFDIIVRLKEEGITILLVEQNAYSALKISDYAYVLENGRIVMENEAKNL
                     IGDDEIRKKYLGL"
     gene            complement(13786..14556)
                     /locus_tag="RJ318_000304"
     CDS             complement(13786..14556)
                     /locus_tag="RJ318_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7430205.1"
                     /translation="MILELKQISKSFGSVKAINETSFKINEGEIFALIGPNGAGKTTL
                     FNIITGNYKPSSGSVEFLGERIDHLKPHKIVHLGIARTFQNIRLFSSMNVLENVLIGF
                     NKQMKYNIFEAFLHLGRFGKIEQVFKEKAYAILEELGIAEFAYEKATSLSYGQQRKVE
                     IARAMATQPRLLLLDEPAAGMNSSESDELAGLIFKLRKDYKISVLLIEHDMKFVNKLC
                     DRVLVLDYGKTIFEGKLCDAVNHKEVIAAYLGDFDANS"
     gene            complement(14553..15605)
                     /locus_tag="RJ318_000305"
     CDS             complement(14553..15605)
                     /locus_tag="RJ318_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HDV7430206.1"
                     /translation="MMVRIKVSHLIFLIASIIFIFISPYIFGDYGLNIVNQIAIFIIL
                     AVSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAKNDQFFLDGPSSFILAIHSN
                     SFILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGIIIKIAAINFPSITNGSR
                     GLVDIPQFSTIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIK
                     TLAFSTSAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAI
                     LVIGGSEWLRFLDELNIKIDSLNLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYEL
                     SDVIRGIKKRFKRSKK"
     gene            complement(15605..16501)
                     /locus_tag="RJ318_000306"
     CDS             complement(15605..16501)
                     /locus_tag="RJ318_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HDV7430207.1"
                     /translation="MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDI
                     MMVGAYAALFCMTNLNVPFLGALSLAMIFAACVGIATDRIAYKPLRQAPRISLLITAI
                     GISFFLQNLFNMLFTSTPRTFTPPSYFEESVNFGGVITTYGSLMVPALTFVILIAVLW
                     ILYKSKYGIAIRALAFDIQTVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVE
                     PTMGTLIGLKAFAAAVLGGIGSVVGAVLGGLIIGFTEVVVVAFFPDLSGFKDAFAFIF
                     LVFILLFRPTGILGINFEKSRF"
     gene            complement(16520..17629)
                     /locus_tag="RJ318_000307"
     CDS             complement(16520..17629)
                     /locus_tag="RJ318_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV7430208.1"
                     /translation="MKKSLILASILSLSLSAAEVKIGVVLPLSGATAAYGQSALEGIK
                     LANSMQSALSNGDKVSLAIIDTKGDKLESSSGANRLVSQDKVIGLIGEMVTANTLQVM
                     RVAEDNKIPLIAPAATGDRLLDKKIYSSRVCFMDSFQGSSLAKYVFSKLNYKSAVIVV
                     DQSTDYSLGLAKAFEKQYKSNGGQILRILRVNSGDKDFRAIVAQVKSLNPEFIFLPLY
                     YSEASLFARQSKLAGLNIPMGSADGVADQTFISLAGDASEGYIFTDSFDANNPTTKLS
                     KEFISVYEKAKGTKEVPNFSAMGADAYFVMLNAMNACVENLTSKCVNEKIHQTKNYQG
                     VSGVISIDQTGNATRSVVVKEIKNQKQNYKDIINP"
     gene            complement(17651..18766)
                     /locus_tag="RJ318_000308"
     CDS             complement(17651..18766)
                     /locus_tag="RJ318_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV7430209.1"
                     /translation="MKKLTLTLSVLTMVNCLYAKDINIGVVLPLTGTVAAYGQDVFNG
                     IELANKLQPKLSNGDVIKLITIDTKGDKLETSNGVNRLIATDKVLGIIGEATTPNTIQ
                     AISIAEEKKIPLIAPVASGDKLLDKKKYASRVCFKDSFQGDKFATYVSKDLGLKNAVI
                     IIDQSNVYSLGLARAFENSFKNNGGKIIKKLVINSGDKDFRAVVSQLKSLNPDFVYMP
                     IYHPEAALIARQARQIGFDKLLAAGDGVNNQTFIDLGGSAVNGVIFTDSFDYNSPSTQ
                     LGKDFVAAYEKVKGTKELPAFSAMGADAYFVMLNAMNACVDNLSSECINSKIHQTKDF
                     QAVGGVISIDESGNAIRSVVIKEIQNQKQNYKTIINP"
     gene            complement(18797..19231)
                     /locus_tag="RJ318_000309"
     CDS             complement(18797..19231)
                     /locus_tag="RJ318_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDV7430210.1"
                     /translation="MIARWLFISSIFVVALFGINLKSFFTYTFDANKQYDMEKAKALY
                     FQNKCNTCHGDNAEKSVIGSRILKDMSPEDIKGALIGYTLDSSSSTTASQMAFYARNL
                     SHEDIDNIIAYIKGGNFALDLQVKDLLEEEPAQKTKHNIFLK"
     gene            complement(19240..19431)
                     /locus_tag="RJ318_000310"
     CDS             complement(19240..19431)
                     /locus_tag="RJ318_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mini-MOMP protein"
                     /protein_id="HDV7430211.1"
                     /translation="MKKIFLIGMILNHFVFAAPLDEVFKDIEVSGTVRYRYDIKKEKK
                     YNKKTHRYQNKTQTEITIK"
     gene            complement(19484..19990)
                     /locus_tag="RJ318_000311"
     CDS             complement(19484..19990)
                     /locus_tag="RJ318_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhA family protein"
                     /protein_id="HDV7430212.1"
                     /translation="MLEKIFESLLVRSRIVTILPVIFGLIGAFVLFFIASYDVLKVIF
                     YTYNYFFDAGSNVDLHEDVVALIIGAVDLYLMALVLFIFSFGVYELFISEIEEFKQTK
                     QSKVLEVHSLDQLKDKLAKVIIMVLVVNFFQRVLQMKFATPVDMAFLAGSILALCVGL
                     YFLHKGGH"
     gene            complement(19999..21030)
                     /locus_tag="RJ318_000312"
     CDS             complement(19999..21030)
                     /locus_tag="RJ318_000312"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDV7430213.1"
                     /translation="MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSVG
                     SEVEFKGKAYKVKELTENVFKENPIDIAFFSAGGSVSEKYAKFAVESGAVVIDNTSHF
                     RMEKDVPLVVPECNPEDIKDWKKTGIIANPNCSTIQMVQVLKPLNDAFNLKRVDVSTY
                     QAASGAGKEGMQELVEAMQSFFAFKLDEFEPQTFPYTLALNLIPQIDVFMDNDYTKEE
                     LKMVNETQKILHKNLEVSATCVRVPVLRSHSEAITMHFEKEIDVKKAKEILEKAPSVI
                     VIDDPKNKKYPMPLMTSDTNETYVGRIRADVYDKKILHLWCVADQIRVGAATNAVRIA
                     QKWLELKNK"
     gene            complement(21030..22331)
                     /gene="flgR"
                     /locus_tag="RJ318_000313"
     CDS             complement(21030..22331)
                     /gene="flgR"
                     /locus_tag="RJ318_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system response
                     regulator"
                     /protein_id="HDV7430214.1"
                     /translation="MNLVIVEDDINMRKSLEIALAEYEEFNIKSYKSATEALKKIDDN
                     TDLIITDINMPGIDGIEFVKACENKYDFIIMTGNATLSRAIEAVRLGVKDFLTKPFDV
                     DTLVEAIKRAKIIREKTADKKSKKNEKKEENKDFFSTSPNLEKTLNLSQKAAKTDASV
                     MFFGESGVGKEVFSRYIHTHSKRSNKPFIAINMAAIPANLIESELFGFEKGAFTDANA
                     TKIGLFEMANEGTLFLDEIGEMPYEIQAKLLRALQEKEITRLGSTKSIKIDVRIISAT
                     NANLDEKIKNGEFRSDLYYRLNTVPINIPPLRERKEEILGIAQKVLEDTCKEYDFKEK
                     QLSQEAKNALLEYDFPGNIRELISVVQRACILSENDEISSEDLFLEARSIKKDVKNLE
                     KELICEVLLSVDYDKDQASQILGIDIKILNEKIKKYQIKDK"
     gene            complement(22388..22837)
                     /gene="flgQ"
                     /locus_tag="RJ318_000314"
     CDS             complement(22388..22837)
                     /gene="flgQ"
                     /locus_tag="RJ318_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FlgQ"
                     /protein_id="HDV7430215.1"
                     /translation="MERIVCLLIFLSFKLFAQDEFIFWAELSSKNFILFHQNQNLSLA
                     MTQSENVEEQWVCEISYSDQDLKVLPRTSLGLIDDNMPKTIKFNFLNSHKDELSDCFI
                     GARISVKDIVNTDLLRAQSETYVKILPLRFTVEFGEQNAIIYYLKKK"
     gene            complement(22813..23328)
                     /gene="flgP"
                     /locus_tag="RJ318_000315"
     CDS             complement(22813..23328)
                     /gene="flgP"
                     /locus_tag="RJ318_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly lipoprotein FlgP"
                     /protein_id="HDV7430216.1"
                     /translation="MKKIYFMLAIAGIFAGCVPSANSATKNSSANSTAPSQDVIVQKV
                     DKDDVRDIIREEKMLAPDASETELSFTAVGEGIAPMNTVSTAQALALAKRAAITDAYR
                     QLASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDENFNQGLYRVNLELKI
                     DADKWKELFAY"
     gene            complement(23392..25983)
                     /gene="gyrA"
                     /locus_tag="RJ318_000316"
     CDS             complement(23392..25983)
                     /gene="gyrA"
                     /locus_tag="RJ318_000316"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HDV7430217.1"
                     /translation="MENIFSKDSDIELVDIENSIKSSYLDYSMSVIIGRALPDARDGL
                     KPVHRRILYAMQNDEAKSRTDFVKSARIVGAVIGRYHPHGDTAVYDALVRMAQDFSMR
                     YPSITGQGNFGSIDGDSAAAMRYTEAKMSKLSHELLKDIDKDTVDFVPNYDGSESEPD
                     VLPSRVPNLLLNGSSGIAVGMATNIPPHSLNELIDGLLYLLDNKDASLEEIMQFIKGP
                     DFPTGGIIYGKKGIIEAYRTGRGRVKVRAKTHIEKKTNKDVIVIDELPYQTNKARLIE
                     QIAELVKERQIEGISEVRDESNKEGIRVVIELKREAMSEIVLNNLFKSTTMESTFGVI
                     MLAIHNKEPKIFSLLELLNLFLTHRKTVIIRRTIFELQKARARAHILEGLKIALDNID
                     EVIALIKNSSDNNTARDSLVAKFGLSELQANAILDMKLGRLTGLEREKIENELAELMK
                     EIARLEEILKSETLLENLIRDELKEIRSKFDVPRITQIEDDYDDIDIEDLIPNENMVV
                     TITHRGYIKRVPSKQYEKQKRGGKGKLAVTTYDDDFIESFFTANTHDTLMFVTDRGQL
                     YWLKVYKIPEGSRTAKGKAVVNLINLQAEEKIMAIIPTTDFDESKSLCFFTKNGIVKR
                     TNLSEYQNIRSVGVRAINLDENDELVTAIIVQRDEDEIFATGGEENLENQEIENLDDE
                     NLENEESVSTQGKMLFAVTKKGMCIKFPLAKVREIGRVSRGVTAIKFKEKNDELVGAV
                     VIENDEQEILSISAKGIGKRTNAGEYRLQSRGGKGVICMKLTEKTKDLISVVIVDETM
                     DLMALTSSGKMIRVDMQSIRKAGRNTSGVIVVNVENDEVVSIAKCPKEENDEDELSDE
                     NFGLDLQ"
     gene            complement(26024..26599)
                     /locus_tag="RJ318_000317"
     CDS             complement(26024..26599)
                     /locus_tag="RJ318_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HDV7430218.1"
                     /translation="MRCINCGAFALLCFCELCELELYEFSLNVRKLDNNFKVYSFYKY
                     HEIQHLLHSKHYFYGYFVYKMLAKLSFAKFKDFFDPRMTINVIALDDKVEDMLYSHSA
                     ILARYLKTKFVKPVFNVLKAQNSVKYSGKSLEFRQKHKRNYKLLKTIHEPVILVDDIV
                     TTGSSLLEAKKVLEENKISVLFALVLADAKV"
     gene            complement(26596..27240)
                     /locus_tag="RJ318_000318"
     CDS             complement(26596..27240)
                     /locus_tag="RJ318_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430219.1"
                     /translation="MFKKFLIFIVPILFLSACATKQDTFAQVNQISKNSQCSSCESPG
                     GFEAKIKGLLYISDVGIQCCANKRTLDTGIALKKVYLHRFYDLKEGQKVLNAKGKKLF
                     VDVNFNAVFYTYLKQELEARGIVVLDNNDQNSPYVSKIDLEFISYGATQDAIGLHSKL
                     VGVLQVSDINKNKKFTIRTKQDVQGFDDLKETTFYTHLLIKQMANKAASLISEL"
     gene            complement(27317..>29096)
                     /gene="lepA"
                     /locus_tag="RJ318_000319"
     CDS             complement(27317..>29096)
                     /gene="lepA"
                     /locus_tag="RJ318_000319"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDV7430220.1"
                     /translation="RNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMDTMDIEK
                     ERGITIKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQG
                     VEAQTIANVYIALENNLEIIPVINKIDLPNADVEKVKHEIEHIIGIDCKDAICVSAKT
                     GVGIKELIETIITKIPAPKTDDEAPTKALIYDSWFDNYLGALALVRIYEGSIAKNDEV
                     LVMSTDKKHIVQDLFYPHPLSPIKTQSLQSGEVGVVVLGLKTVGDVQVGDTITLVKNK
                     AKEAIGGFEKAKAFVFAGLYPIETDKFEDLRDALDKLKLNDSSITYEPETSLALGFGF
                     RVGFLGLLHMEVIKERLEREFNLDLIATAPTVTYEIYQTDGELIKIQNPSELPPVNKI
                     DHIKEPYVKATIITPSEFLGNLITLLNRKRGVQVKMDYITPERVLLEYDVPLNEIVMD
                     FYDKLKSLTKGYASFDYEPIEFRVGDLVKLDIKVAGENVDALSIIVPNEKAQSKGREL
                     VSAMKEIVPRQLFEVAIQASIGNKIIARETVKSMGKNVTAKCYGGDITRKRKLLEKQK
                     EGKKRMKAIGKVNLPQEAFLSVLKID"
BASE COUNT        10072 a         5372 c         3468 g        10184 t
ORIGIN      
        1 cttatcttta aatgctgata taataatttc tgctgataat ttaccgaatg tttctaaaga
       61 atttttacaa cataatttca aagcgcctat agggatcgtg caaaaagaca aaaattccta
      121 tgaagtctat cttagcgatg gaacagagct tgaatttgat atagatggag cttggaagga
      181 aattgaaaat aaagcctttc cttttgatct agatttttta cctcaaaatt tagccaatat
      241 catcaaaaac gaatttccaa atacaaaagc tagagaaatt gaaagaaaaa tcaaccatta
      301 taagattaaa cttgataacg atataaaaat tcttatagat tttaatggaa ctatcttata
      361 taaagaattt gatgattaaa catatcatca aacctgcatt atatctttaa catcgtcata
      421 ttctatcttt tctttttcaa gcaaaagctc tgataatttt aaaattttat ccttcataga
      481 atttaaaaat tcatccattt cttttttttg ttcacttaaa tttgactctt tcaacatatc
      541 aaaactcaac atataatcaa gcaattcttt aatctttaaa aaatcatctt gcgagttagt
      601 ataactttca ttgtaaatca atctcatggc tctagaacca gccaaataaa cttttatacg
      661 attgataagc tctgattttg atcttatatt atgctcatat tctttaaaac gatcttcaat
      721 gagagtgatt ttttcaaatc ctatgtcaaa ataatacgca ctcaaagctt ttgcagcttg
      781 ataagtggct tgaattttct tctcttcatt attaaaactt aaaatctttt tcttacctaa
      841 aagaacttta tttaatacag cataaaaatc gctttcctca actaaagcac tatttcttct
      901 taaagcatta attgctgctt cattgaccaa agtttcaagc cctgctccac taaaacctac
      961 gcttgcttta gcgattttat ttaaattgat attattgttt ttatctttca tataaatttc
     1021 taaaatttta agtctatcct taaaatcagg caaagataaa aaaattctcc tatcaaaacg
     1081 ccccgaacgc aataaagcag gatccataag ttcgatttta tttgtcgcag ctataactat
     1141 aaccccgcta ttgtcctcaa aaccatccat ttgagttaaa agttgattta aagtgctatc
     1201 tctttcaaca tttgacattt ctcctcttgc cttacctacg gcatctattt catcaataaa
     1261 aactatgcta ggcgccatca ttttagcttt tgaaaaaagc tctctaactc tttttgcacc
     1321 catacctaca taaatttcaa caaaacttga accactttga taaaaaaatg gcacccctgc
     1381 ttctcctgca actgcttttg ctatcaatgt ttttcctaca ccaggtgggc ctaccattaa
     1441 aacacctttt ggcattttta caccaaattc tttatatttt ttaggatttt gtaaaaaatc
     1501 cacaagttcg cttagctcca ttttaacttc atcaacacct gctacatcat taaaagtaat
     1561 atttgaaatc acaggtttta tatgggaact ttctaaattt atatttgaat tttgagcttg
     1621 agtgtgattt tgattcttat ttgatattgg atatttaacc aactcttttt tacgagcaaa
     1681 ataaccaaga cttataaaaa gtgcgataat aaaaataagt aaaacaaaaa acacccaaag
     1741 cgtattatct tttttaacct ctacgggaac ttttgataaa agtgttttta tatctatgcc
     1801 atcttttata attacgtaat tttcaccttc tgccttaagc caaatttcgt ctttatcaat
     1861 cacagctttt tggattaaat tttggcttaa tagactttga taaagatttt catctatata
     1921 tttaggttca tttttaaaat ataaaattcc caaaagcata cataaaacca taaaagatgc
     1981 taaaattatc tttttatttt tcattatcta gccttttaaa tttgtaaagt tagacttttc
     2041 ttgtacttca tattcagata taacgatcca ttctttagct atatctttat cacttttaat
     2101 tttgatctta ttaaaaaact gatcataacc ctcaaaaaaa ccatcttttt gattttctac
     2161 caaaacttca agtgaaactt gatttttttt cctaaattca taattatttt tttctactat
     2221 ggattttaaa gtgtttagcc tttctttagc taaagttcca tttatcacat ctttcatggt
     2281 agcagaatgc gtgttgtttc tagggctaaa aataaaagca tggatatgag tgagtggaaa
     2341 ttctttaaaa tttcttaaag cttcttgcca tagctcttca ctctcgcctg gatgagctac
     2401 tataaaatcc gtccctaaag catatccttt gcttgctata gtattaaaaa gctttaaatc
     2461 attatccgta tgtgatcttc ttctcattat acgaagcatt ttttcacttg tatgttgcaa
     2521 tgcaatatgc aaatgccttt caagccaagc ttcatctaag atttctaaaa aactttcatc
     2581 aagctgtgca ggttctaaac tacctagcct tatgcgtttt atacctaaaa tttgtcccat
     2641 tttttgcaaa agcttgccta gggttgtgcc atttttaagc ccatatgaac ctatattagt
     2701 ccctgttaaa acaatttcac tataaccatt agctcccaaa atttcaacct gttttaaaag
     2761 agctttttca tccacacttc ttgattttcc cctcacgcta ggaataatac aataagaaca
     2821 agcaaaatca caaccttctt gaattttcac aaaagctttg gtatgatttt catactcaca
     2881 aactatatct ttatcaataa aatttaaatt tccaagttca taaaaacttg tctttgctcc
     2941 taaaaattca ttgattttat ctttatttga cgctccaagc actccaaaaa cttgcttttt
     3001 atctaaaagc tccttacctt tgcttacagc accacaacct gtaagtataa ctttaatgcc
     3061 ttttttttgc atggtattta cataagactt tatcccgcta tcagctccat ttgtaaccgt
     3121 gcaagaattt acaacgataa tttgtgcttt attctcatca tttataatct cataatcttt
     3181 tacataactt tttaaaagct ctgtatcata aatatttgtg cgacacccaa aggttttaaa
     3241 aaaaactttt tctttcaatc cttattcctt gcatgaaaat acatattttc atgatgttgt
     3301 tcaaaatgat tttgatttaa atttcctaaa tataaatttt gcgatggata agcaattttt
     3361 atatctttat gcttattaaa ttcttttata atctctttgc taatcgtact tcttaatacc
     3421 aaagccgcat aagcattagt catataccat gcagaaattc tcattcccca atgttcaaaa
     3481 aacataaaaa accttggctc cactttagga tttttaatac tatattcatg ttgtaaacga
     3541 gctatatttt ttctagcaag ctcagtataa cctttggcat ggcgtgtaac aatattttcc
     3601 acaatttctt gagctttgtc aagattgcta tcaaaagtaa cacttatatc aatgccatca
     3661 agcacggttt tcataccatg atgggtataa ttagcaagca aatttgtaaa aacatagtta
     3721 ttaggaataa atataatacg cccactacga cgatttttat tataagtttc aagcgtaagc
     3781 tcttcataaa gagtaatgcg taaaaaagaa atgtctataa tatctcctat ataggtagta
     3841 tcattttgaa aaacttttac acgatcccct actctaaaac ttccgccaaa aataatcaca
     3901 caccatccaa gcatagacat aaacatatct ttcatagcaa tagctaagcc cgcagaggca
     3961 aaaccaagta tagttacaag ataagtaata ttttctatat aagcaaagag caaaataaga
     4021 aaaataatat ttatattaat aaaattaata atcttcgtag cagtataata tctttcacta
     4081 tccttaatgt attttttagc aataaatttc aacataaaag ctatagctat aacaataaca
     4141 atagcaacaa gtatatttac agcccttaag ctttgaactt taatctcagc acttactcga
     4201 gaaagctctt catcaatttt tttctcataa acagaataag aaacactagc aaaatttaaa
     4261 gcttgctcaa attcttccag ctttttatcc gaagctttta aagcttctat attctcaaca
     4321 cttggtttaa gctcaactaa ttccttaagt tctgagtttt tttccctgat tttatctact
     4381 aaatttttaa aatcattaaa tttaaatata tactcttcct tttctccttt taatttctta
     4441 atatgagaaa aagctcctat aatagccaaa ggattagtaa gcttagataa agtttctata
     4501 ttatcagggg cactaagact ttgtgcaaaa tttaaatctt tatattcttt aagcaagttc
     4561 aattgctctt ctaaatttgc tatcttgcgt ttaagttctt cttgttggtg aatatcggaa
     4621 gtctttttta aattaagatt taaaatgatt aattcatcat ttatatcttg atattttata
     4681 aaattttcat aacgtatatt ccaaatacta gcactgatta cagtatttaa agtattaatt
     4741 ttctcattta tattattaat aatagtccga tttacatcac caaaagcaaa aacaacaaaa
     4801 aaggttaaaa taataatttt tttcattgga attctcttaa agttgcaatt atatcttctt
     4861 tagaaatatc accttttatc aaacccttac ccaaaggact agcaagaaca aaattgattt
     4921 ttttattaga gcttttttta tccatgaaaa aagcttcata aaattcatct acattgttga
     4981 ttttatatga tattggcaaa ccgaatttaa gtaaaatatc ttttattctt tgactttgca
     5041 ttttatccaa aagccctaaa tttaaagcca attgatttgc cataaccata cctatagcca
     5101 ccgcttctcc gtgtaaataa agcttataat ctgtaaaatt ttctataaca tgagcaaaag
     5161 tatgaccata atttaaaagc attctaagcc ttgattcttt ttcatcttgt tcaacaaccc
     5221 ttgatttaag ctctatgctt tttactataa tctgagtaaa aatttcattc tcacaagtag
     5281 catttaagaa acttttttca tcaatttttt ctataaaatc aagtatacta taatcaaaca
     5341 ttgctgccat tttaataaat tcagccatgc ctgcagcaag ttctctagag ctcaaagtct
     5401 ttaaaaaaaa actctcacaa tatacagctt taggttgata aaaagtgcca ataagatttt
     5461 taccaaaatt attattaaca cctgtttttc cacctactgc tgcatcaaca caagctaaaa
     5521 gtgtagtagg aatatttata aaatcaatac ctctttgata aatactagca gcaaatccgc
     5581 ccatatcact aatcacgcca ccaccaaaac ttataagtac gctttttcta tccaatttag
     5641 aattaaacat ttggtttaaa atttcttcca tggtgcttaa atttttatat tcttcaccat
     5701 ctttcacagt ggcaataaaa atttcttttg ccttaatttt agaaagtaat gttttcaaat
     5761 gaagacctga aatcttagga tttgaaagta taaaaacctt actatcaaat tctaattctt
     5821 caagttcatc aatataaacc ttataagcat tttcttttaa cttaacttct acttgcattg
     5881 aactactctt tttgcattta ttttatcaca tttaattaat tatttattct actggtatga
     5941 aaagttggta attttgtctc attttgtaat aatgcctatt taaatttgta cttaaatttc
     6001 tggcaaaatc tctatttagt aattcttttt gaaaactcac aaattgtaac aaatcttcgc
     6061 gatattgcaa atttaaaaga gggttttcat catttttatt aataatttgt atatttttat
     6121 cataaagctt agataaactt ctaaaatact cctccatatc tgtagtattt tgagaatttg
     6181 gattataata atataaaata actccaaaat caagctgttt acttaaatca gtaatgacat
     6241 ttgcattgtt ttcaagttca ctctcatcag cacttaaaat aatcgcttct ttaagctcat
     6301 caaaagaagc ttcacccacc ttcataatag gaatttttaa atcaaaaaaa gcttgttttt
     6361 ctttctcaaa attttttata tcagttacaa ctaatcctat atcattattt tgcaaccaca
     6421 tggaaatttg tttaaaatcc gtgttgaaat aatcaaaaaa cacaccttct ttatcctcag
     6481 aaagtttttt taatttttca tacattaccc ctaatttagg attgataaca tgtataaaaa
     6541 atctttttgc attgcttttt tgagttaatt ttaaagtagt atcaagcact ctttcttgca
     6601 tattttgatt catatttttc atatcaatta aagcaaaaac attacttcca aaaggcatag
     6661 gaaattgccc tgctttgcct cttatattat gaaaaatact ttgtaaaaca acaggatccc
     6721 caacgatcaa aatgctatca tttggctcta aaacaaaaga tggttttaca aaataaattt
     6781 tagaatttct ataaataagg actatgcgcc accttttttg ttgtattgaa cttatgtgcc
     6841 tataagcaaa aatagaccct gctggaattt ttacttccat aatctctcca actccaagtc
     6901 ctatatactg agctgttaaa gcaatatctg gtaaaaaatc cataaatcta cggcttaaag
     6961 tcattctagc atcagctaaa tttgcatgag tatcattaac acttaacccc caaaaatcca
     7021 ttatttctat ttctaaattt ggatttaaag aacgcaaagc ctcataactt tttttagttt
     7081 caaattcatc ttgcatataa ataaaagcct gtttaaaatc cttactcata atattttcaa
     7141 gacgcgctgt gcttgtagga tcaaaataat gcaagtcaat atactcgcta gaaatattta
     7201 agttattttt ttcactattt tgacacacta ctgtaaaaaa gtaacctaag cctttttcaa
     7261 aacaaagcct ttctaagaaa tgctttgcta aaataccatc tattataatt aaaatattat
     7321 tcattttaaa ctccaaaaag gaaattataa caaatggaat ttaaattaaa gcataaagat
     7381 ggaatggcaa gggtttgtga aatcactacc gcacacagca cttttttaac ccctgttttt
     7441 atgcctgttg gcacagtagg agcggttaaa agtcttgatg ctaatgatat gaaaaatgag
     7501 cttgatgcaa aaattatttt agcaaatacc tatcacatgt acttgcgtcc aacttccaaa
     7561 gtagtaaaag attttggagg tttacatgga tttacgaaat ttgatagaag ttttttaacc
     7621 gatagtggtg gttttcaagc tttttcttta agtaaaaatt ccaaacattt taatgaaggc
     7681 atagaattta aaagtcacat tgatggaagt cgtcatcttt ttactccaaa aagtgtttta
     7741 gatactcaat atgattttaa ttctgatatt atgatgattt tagatgattt agtagcccta
     7801 cccgcaacca aagaaagggt taaaatttct gttgatcgca ctatactttg ggcaaaagag
     7861 gctattactt atcataaaaa tatgcaaaat aaaggtatag gtatagggca aaatattttt
     7921 ggtattatcc aaggtggtac agattatgaa gaaagaaagc gttgcgcttt aagtttaaat
     7981 gaaatgccat ttgatggttt agctataggt gggcttagcg tgggcgaaga aaacgccttg
     8041 atgtacgaaa cagtccaaaa cttaaaccct tatctagatg aaaatcgtcc aagatattta
     8101 atgggcgtag gaacgcctga agatttagta gaaaatgttg agcgaggagt agatatgttt
     8161 gactgtgtga tgccaactag aaatgcaaga aatggaacat ttttcacaag ttttggaaaa
     8221 tttaatatca aaaaagcaga atttatcaac gatcatgaag ttatagattc tacttgctca
     8281 tgttatactt gtcgtaattt ttcaaggggt tatttaaacc atctttttaa agctaaagaa
     8341 cttacttttt ttcgtttggc aagtctgcac aatctacatt attatcttga acttgcaaga
     8401 aagatgcgtg aagcaatttt gaacaattct tttacgcaat ttaaaagaaa tttttatcac
     8461 ttaagaggca aataaaatgc tagaactaca cgaaaatcta aaaaaaatcc tacaagcaaa
     8521 gaatttagaa actttttata gtgaaattta tggacaaaaa atttttgttt atgtgggatt
     8581 aaatttggaa acttggcttt ttaacgatga aaaaatttat aaacttcaag atggagaatt
     8641 taagctttct agcatagaag aattttcaaa ttttattaaa tccattttag aagattttaa
     8701 agtacaaaat actcattttc aaaacctttt agaacacaaa gaaggtatta tcttaaaagg
     8761 tggttttgtt aaaaattttt acaaaaaatc ctttgtgtta agacaaaaaa tcaacaaaaa
     8821 tctaaagcaa attaatcttc taagcgaagc tttcaatctt ttgcttagtg aacaagcaca
     8881 atataaaaaa catttaaaaa ttttaaattt atccatcagc atcttaagta aaaacaccaa
     8941 agaacatcta gcaagaattg atactcttta tacattaaca aatgcaatta aaaatgaaaa
     9001 aatgaataaa agtatttatc ttttaagtat actttcttct attttcttgc ctttaaattt
     9061 gatcgtagga ttttttggaa tgaatactaa taatcttttt ttcaaagata gcccttatgg
     9121 tacactttat attttttctt tgatttgctg tattttgatt gtaggtttta tattttatta
     9181 ttcaaaaaag actaaagaat ttgatttaga tgaaggtaaa aaagctaaaa aacaaacaaa
     9241 ataagcaaaa ttttgcttat tttaagaata tttatatata attttaactt atttttgcgc
     9301 tcatagctca gctggataga gcatttgatt gcggttcaaa aggccagagg ttcgaatcct
     9361 cttgagcgca ccatattatt tatcttcttt aatttttctt ttagctaatc ccatatgctc
     9421 gtaagcatca atttcttttt tgtaagatcc ataaattttc ttaagttctt tatttaagta
     9481 acttactgtt tgtgcacttg cattaatatt tgcagccaaa gcagaaacaa attctagttt
     9541 cttttttgct gcttcatcta attctttaga agtttttgaa ccaagtttat gtgtctgcac
     9601 ataaagtttg gcaagttctt ttaattcaat atccgttagt ttaacatcgg aagcagcaat
     9661 tatcatttta tctaagtctg tatcaaattt tttagtcttt tcagctacat gctgcttttg
     9721 gctagttttt tgctttttaa ttgttttttt gccatcactt gtaataagat aagcaatcac
     9781 gcctaaaaac aataaaagcg ctaaagcagc acaaaaaata accaaaaaaa tatggttcat
     9841 ttaaagtttg cccacaaaat ttcgcttcct tcttgcaaaa aaagctaaaa ccaccatcaa
     9901 tgcaaatccc caataaacat aattaggaat ttgagccgct tcgcctgcag cgtaagaatg
     9961 aagtcctgtt aaaaagtaat ttactccaaa ataagtcata ataataaccc aataagcaaa
    10021 catactccat aaagcaaaca caaattgatt acaatatttt ggaatcattc taagatgcaa
    10081 aattgctgca taaaccaaaa tgctaactaa agcccaagtt tccttagaat cccaactcca
    10141 atatctcccc caactttcat ttgcccaaat tgctcctaaa aaatttccta cagtaagcaa
    10201 acaaagtcca aaaatcattg ccatttcatt aattcttgta gcctctgtaa tatttctcaa
    10261 aatattaaga ttatattttc catctttctt aagaaaacac attaagaaca atgtaaagat
    10321 accaagtaag gcacaaagtc ctaaaaatcc ataactagca gtaataacag atacatgaat
    10381 actaagccaa taagaattaa gcacaggaac aagatttgta atttgcggat tcatttcgct
    10441 taaatgcgca accattaata caacaccaga taaaatagaa gttaatgaca aggctatagg
    10501 actttttctg gagaaaaata tacccgacaa agacaatgcc caagctatat acaccatact
    10561 ttcatagcca ttactccatg gagcatgacc tgataaataa gcacgaagtc caagacctac
    10621 tgtatgaatt acaaaagcta aaacatttaa aacatatacc actttaaata taaaagagat
    10681 ttttaaattc ggtacgacca ttttagaaaa aacaagaatc aagagtaaaa aacccgcaat
    10741 taaatataca ggagcgagtt taacgaaaat ttcagcctta ttagaaaaaa tttccatttc
    10801 aaccttggtt ttactaggca tgactttata tcctattttt tcttgatatt ctttgataaa
    10861 tttcaagcct tcatcagctc taatccaatt accatcttta aaagcatttt ccacggcact
    10921 aaaataattc tgtattaaag ccaaaacaat atgcccttca tcccccttaa gagtagttac
    10981 agcagaaaaa ggtgcaagcc aaacattatt tggattattt tgaacaggaa taaatttaaa
    11041 taattcacca ctaaaaacta aatttacaac attagctctt tcatctagtt ttataatttc
    11101 cttatcaaaa actcctcttg catttgggtt tttacgattt gcattttcaa catatttttg
    11161 aagtttatag cggttattct catcaaaaaa atctttataa gcaatatatt tagcactagg
    11221 aatttctaaa atatttgcaa tagcatcacg aactgcttga ttttgtggca ttaaaataaa
    11281 aggttccaat tgccatttat ctacatcaac gagcatggaa agcataacag cgttagaatt
    11341 ttgaccctta tagctatcac tttgatgaat tttttctaaa atttctcttg atagcgtatc
    11401 aaaaggcacc attcttccat ctgctgattt ttgaactatt aaagtggcaa gagctttagc
    11461 atgattagta tttaccacag gtaaggtcga atttaaatct tgagcaaaag tcttttcaga
    11521 accaaaagat aacaataaaa taaaaataat cacacttgta tgttttaaag tgtctttatt
    11581 aattaatctt gccaaagttc taaatctaga atgtggattt aaaaaattca taaacattcc
    11641 aagacaaagc agaaaataac ctatataagt tggtattttg cccggatctt tatttacaga
    11701 taaaacagtc cctttttcat cttgatcata agaactttga taaaatctat agccatcata
    11761 atctaaaaca ttattcataa aaattctata atcaaaattt tcattattat tttttacggt
    11821 aatttcactt gcataagaag ctggagacat agaacctgga taacgatcta atacaaaatc
    11881 tcttaaataa atatcaaaag gcaattgttc ataagaaagc gcccaagaaa taaagaattt
    11941 ttgatctgca agttctatca taataggttt attatattca aaaatataaa attctttact
    12001 ttcattttta tagcttaatt ctaattttaa agcattagag ccagttaatt ctaagttttt
    12061 attctcattg cttaaggcaa aatctttaaa atgcaataat aaagaatttt tccaattttg
    12121 aggctcgcca aaagtagaaa tcaacatagt tctacccact tctaaccaag cagatttaaa
    12181 ccataaccaa aaactttcat cttgaggtct attggaacct tctaaagctt cttgcgcatg
    12241 caaagaagca gctttaacta caaaactaat atcattaatt tcataaagtc ttctttcctt
    12301 agcatttgcc ttttctccaa ttttaaggtc taaattttgt ccatctagca tgcttagaaa
    12361 atgtaagttt tcacttgaac ttaaagttaa attttcatca atttttacaa aaggtgcttt
    12421 aacattatca ttcataaaag caaagttaac cccttctata ttcttaactt cacctttttc
    12481 aaatttaaca tcaacacctt gagatccttt ttgagaaagc atcaaaacca ataaaggatc
    12541 agaattatta ttttctttat aagtataatg agcatttaag attaaatctt tatattttaa
    12601 tacagcttga tcatcaccta aattaagttt tagtttaaaa gaattagcaa aaggcaaatt
    12661 tcctatataa cgatcattaa ccgcactata gcgttctcca tcttttatag cagaaatacg
    12721 caaagaagtc ttagaacttt ctataagtga attttgagta tgctctctaa taggtaaaat
    12781 accttcaaaa ccagcatatc ttgtcattgc agaacccact aaaataaata aaaaagaaat
    12841 atgaaaaatc attaaaggta attttttaag cccaaacatt ttataacgaa acatcccgca
    12901 tagtaaatta ataccaagta aaagttgtat atattcaaac caaaaagtat cataaaccat
    12961 tgcccaagcc gtaggggttc cataagcact ttcaataaaa gttgccaaag cacaaaaaag
    13021 cgcaaaaagc aaaaacaata caaccgaaac tcttaaattc cctatgcttt ttattatatt
    13081 tttcattctt tttcctttaa attttaaagc cctaaatatt tctttctaat ctcatcatca
    13141 cctattaaat ttttagcctc gttttccatt acaatgcgac cattttccaa aacataagca
    13201 taatcactta tttttaatgc agaataagca ttttgctcta ccaaaagaat agttataccc
    13261 tcttctttta aacgcacaat aatatcaaaa acttcaccca caatctttgg agcaagtccc
    13321 aaagaaggct catccaacat caaaagtttt ggttcactca ttaaagccct tgaaatcgca
    13381 agcatttgcg cttcccctcc actcaatgtt ccagctaaag catgcttttt acttgcaagt
    13441 cttggaaaaa gtttatacat ttgctctctt aaatgctcat aattttcagc attattaaaa
    13501 gcacctattt ttaaattttc ctctacgctt aaattaataa aaacacgcct tccttcagga
    13561 actaaagcta tacctttttg aactaaagta tgagttaaat gccttttagt atcataacct
    13621 aagaaattaa cctcaccagt tcttttaact gagtttaaaa gcgcatttaa agttgaagtt
    13681 ttacctgctc catttgaacc tataagagaa acaatatgac ctgtttccac tttaaaatca
    13741 atccctttaa cagcttcaat taatccataa taaacatgca aatctttaac tattagcatc
    13801 aaaatcccct aaatacgcag caattacttc tttatgattt acagcatcgc aaagtttacc
    13861 ttcaaaaatt gtttttccat aatcaagtac caatacgcga tcacacaatt tatttacaaa
    13921 tttcatatca tgttctataa gcaaaacgct aattttataa tcttttcgta atttaaaaat
    13981 gagcccagca agttcatcac tctcagagct attcatccca gcggctggct catcaagcaa
    14041 taataatctt ggttgagtag ccattgctct tgcaatctca acttttcttt gttgtccata
    14101 actcaagcta gtagcctttt cataggcaaa ttctgcaata ccaagttctt ctaatattgc
    14161 ataagccttc tctttaaata cttgttctat ttttccaaaa cgccctaaat gcaaaaaggc
    14221 ttcaaaaata ttatatttca tttgtttatt aaaaccaata agaacatttt caagcacatt
    14281 catgcttgaa aaaagcctaa tattttgaaa tgttctagct attcctaaat gcacaatctt
    14341 atgaggtttt aagtgatcaa ttctttctcc tagaaattca accgaacctg aactaggttt
    14401 atagttacct gttataatat taaaaagagt tgttttgcca gccccattag gtccaattaa
    14461 agcaaaaatt tcaccctcat tgattttaaa agaagtttca ttaatagcct taacactacc
    14521 aaaacttttt gaaatttgtt ttaattccaa aatcattttt tgctcctttt aaaacgcttt
    14581 ttaatccctc taatcacatc actcaactca taataaccca ttatgccttt tcttgcaaaa
    14641 agcattacta aaatcagaac aatagaaaaa acaaccattc taagccctgg cgttgattgg
    14701 atatcaagat ttaaagaatc tatttttata tttaactcat ctaaaaatct aagccactca
    14761 cttccaccaa taaccaatat cgcacctata atagcacctg tagtagaacc aagtccacct
    14821 aaaacaataa taatcaaaag ctgaaaagta agtaaaaaat caaattgagt tggagatacg
    14881 gtagtcaaca gacaagctaa aagtccgcca cctacacctt ctaaaaatgc tgaagtgcta
    14941 aaagctaaag tttttatcca aaaagtattt attcccatag cgcttgcagc atcttcatca
    15001 tctcttatag ccttcattgc acgaccatat ttagaataaa ctatatttaa aattaaaata
    15061 accgctacaa tagcaatacc acctgtccaa tagatcgtgg aaaattgtgg aatatctacc
    15121 agccctcttg agccattagt aatagaagga aaattaatag cagctatttt aataattatt
    15181 ccaaagccta aagttacaat agccaaataa tcccctctca cgcgaaatac agcaaaagcc
    15241 aaaatcaggg caagtaaaga tgaacaaatt ccagccacaa ttaaagctag aataaaggaa
    15301 tttgaatgga tagctaaaat aaaagaacta ggaccatcta aaaaaaactg atcatttttt
    15361 gcatcagcac ttaaaagaac taaagcagcc gcataagctc caatcgcaac aaatccattg
    15421 ggttctagtg aaaattgtcc agttacacca ttaataagat tgtaactcac agccaaaata
    15481 ataaaaatag caatttgatt aacaatgttt aatccataat ccccaaaaat ataaggagaa
    15541 atgaaaataa aaataattga agcaattaaa aagattaaat gtgaaacctt aattctaacc
    15601 atcattaaaa cctactcttt tcaaaattta tacctaaaat tcccgtaggc ctaaataaca
    15661 atataaacac caaaaaaata aaagcaaatg catctttaaa gcctgataaa tctggaaaaa
    15721 aagccacaac aacaacttca gtaaatccta taataagtcc acccaaaact gcacctacta
    15781 cagaacctat acctcctaaa actgcagcag caaaagcttt taaacctatt aaagttccca
    15841 tagtaggttc aacagagtaa taatttgcag cccaaaaaac acccccaact gctgccaaag
    15901 ctgaacctag ggcaaaaact atagcaataa tacgatttgc atctataccc attaaattta
    15961 ctgtttgtat atcaaatgcc aaagcacgaa tagctatacc atatttgctt ttatacaaaa
    16021 tccataacac tgctattaaa ataacaaatg taagagcagg aaccattaaa gaaccataag
    16081 ttgttatcac tccaccaaaa ttaacacttt cctcaaaata acttggcggt gtaaaagttc
    16141 taggtgttga agtaaaaagc atattaaaaa gattttgcaa gaaaaaacta ataccgattg
    16201 ctgtaatcaa caatgaaatt ctaggagcct gtcttaaagg tttataagcg attctatctg
    16261 tagctattcc aacacaagca gcaaaaatca ttgctaaaga caaagctcct agaaaaggaa
    16321 catttagatt agtcatgcaa aaaagagccg cataagcacc aaccatcata atatcgccgt
    16381 gagcaaaatt aataagtctt aacacaccat aaaccatcgt atagccaaca gcaataagag
    16441 catacatact gcccaaacta agtccattaa caagttgttg taaaaataaa gtagaatcca
    16501 taatctttct atttttcctt taaggattga taatatcttt ataattttgc ttctgatttt
    16561 taatttcttt aaccactaca gaacgagttg catttcctgt ttgatcaata ctgataacac
    16621 cagaaacacc ttgataattt ttagtttggt gaattttttc attgacacac ttactagtaa
    16681 gattttcaac gcaagcattc atagcattta gcattacaaa atacgcatca gcacccatag
    16741 ccgaaaaatt tggaacttct tttgttcctt tagctttttc ataaacactg ataaattctt
    16801 tgcttaattt tgtagttgga ttattagcat caaaactatc tgtgaaaata taaccctcgc
    16861 ttgcatctcc agctaaacta ataaaagttt gatcagcaac tccatctgca gaacccatag
    16921 gaatatttaa acctgcgagt tttgattgtc ttgcaaataa agaagcttcg ctataataaa
    16981 gcggtaaaaa aataaattct ggatttaaac ttttaacttg agctacaata gctctaaaat
    17041 ctttatcacc tgaattaact cttaaaattc taagaatttg accaccatta gacttgtact
    17101 gtttttcaaa agcttttgct aaacctaagg aatagtcagt gctttgatct actacaataa
    17161 cagcactttt gtaattaagt tttgaaaaaa catattttgc taaagatgaa ccttgaaaac
    17221 tgtccataaa acatactcga gaagaatata tttttttatc aagcaatcta tcaccagttg
    17281 cagcaggagc gatcaatgga attttattat cttctgctac gcgcataact tgcaatgtat
    17341 tagcagtaac catttcccct ataaggccta taactttatc ttgagaaact aaacgatttg
    17401 ctccactcga agattctaat ttatcacctt tagtatcaat aatagcaaga gaaaccttat
    17461 ctccattact taaagctgat tgcattgaat ttgcaagttt aatcccttct agtgcgcttt
    17521 gtccatatgc tgcagtagct ccgctaagcg gtaaaacaac tcctattttg acttccgcag
    17581 cacttaaact taaacttaga atacttgcta aaattaaact ttttttcatt ctctaccttt
    17641 attttagtaa ttatggattt ataattgttt tataattttg tttttgattt tgaatttctt
    17701 taatcacaac agaacgaatg gcattaccgc tttcatctat gctaatcaca ccaccaacag
    17761 cttgaaaatc tttagtttga tgaattttgc tattaataca ttcgctgcta agattatcaa
    17821 cgcaagcatt catagcattt aacattacaa aatacgcatc agcccccata gccgaaaatg
    17881 ctggaagttc ttttgttcct ttaactttct cataagctgc aacaaaatct tttcctaatt
    17941 gtgtagatgg actgttataa tcaaaactat cagtgaaaat tactccatta acagcacttc
    18001 cgccaagatc tataaaagtt tgattgttaa caccatctcc tgctgctaaa agtttatcaa
    18061 aaccaatttg tcttgcttgt ctcgcaatta aagcagcttc aggatgataa ataggcatat
    18121 aaacaaaatc aggatttaaa ctcttaagtt gagaaaccac agctctaaaa tctttatctc
    18181 ctgaattaat aacaagtttt tttataattt tcccaccatt attcttaaaa gaattttcaa
    18241 aagctcttgc caaacctaaa gaataaacat tgctttgatc tatgatgata acagcatttt
    18301 taagtcctaa atccttagat acataagtag caaatttatc tccttgaaaa ctatctttaa
    18361 aacaaactct acttgcatat ttctttttat ctagcaattt atctccagat gccactggag
    18421 ctattagggg aatttttttc tcttctgcta tagaaatagc ttgaatggta tttggagttg
    18481 tagcttcacc aataatccca aggactttat ctgttgctat taaacgatta actccatttg
    18541 aagtttcaag cttatctcct tttgtatcta ttgtgataag tttaataaca tctccatttg
    18601 aaagttttgg ctgtagctta ttagccagtt caattccgtt aaaaacatct tgcccataag
    18661 ctgccacagt tccagttaaa ggtaaaacta ctcctatatt aatatcctta gcatataagc
    18721 aatttaccat agttaaaaca cttaaagtta aagttagttt tttcatagta ttccttttaa
    18781 ttatagtttt tacattttat tttagaaata tattatgttt tgttttttgc gcaggttctt
    18841 cttcaagaag atcttttact tgcaaatcaa gcgcaaaatt tccaccttta atataagcaa
    18901 taatattatc tatatcctcg tggcttaaat ttctagcata aaaagccatt tgagaagctg
    18961 ttgtagaact gctactatca agagtataac ctatcaaagc tcctttaata tcctcaggag
    19021 acatatcttt taaaattcta gatcctataa cactcttttc agcattatct ccatggcaag
    19081 tattgcattt attttgaaaa tacaaagcct tcgctttttc catatcatat tgcttatttg
    19141 catcaaaggt ataagtaaaa aatgatttca agttaatacc aaaaagcgca acaacaaata
    19201 ttgaactaat aaacaaccag cgtgcaatca tgattttcct tattttattg taatttctgt
    19261 ttgtgtttta ttttgatatc tatgtgtttt tttgttgtat tttttttctt ttttaatatc
    19321 atagcgataa cgaacagtcc ctgaaacttc tatatcttta aagacttcat ctaacggagc
    19381 tgcaaaaaca aaatgattta aaatcatacc aattaaaaat atttttttca tttttattct
    19441 ttaaacacaa aaaaacgatt atatcaaaaa aagataatcc ttgttaatga ccacctttgt
    19501 gtaaaaaata aagtcctaca caaagagcta aaatcgatcc agcaagaaaa gccatatcca
    19561 caggagtagc aaatttcatc tgtaaaaccc tttgaaagaa atttaccact aagaccataa
    19621 tgataacttt tgcaagcttg tcttttaatt gatctaagct atgcacctct aaaaccttgc
    19681 tttgttttgt ttgtttaaat tcttctattt cgctgataaa aagctcataa actccaaaag
    19741 aaaaaataaa caaaactaaa gccataagat aaagatcaac agctcctata attaaagcca
    19801 ccacatcctc atgcaaatcg acattagaac ctgcatcaaa aaaataatta taagtataaa
    19861 atataacttt taaaacatca taacttgcaa taaaaaacaa tacaaaagct ccaattaaac
    19921 caaaaattac gggtaaaatt gtaacaatac gacttctaac aagtaaagat tcaaatattt
    19981 tctctaacat ttttttcctt atttattttt taattctaac catttttgcg caatacgcac
    20041 agcatttgtt gcagcaccta cacgaatttg atccgccaca caccaaagat ggagtatttt
    20101 tttatcatac acatcagcac gaattcttcc tacataagtt tcattagtat cgctagtcat
    20161 taagggcata gggtattttt tatttttagg atcatctatg acaataacac ttggtgcttt
    20221 ttctaaaatt tctttagctt tttttacatc tatttctttt tcaaaatgca tagtaatggc
    20281 ttcgctatga cttcttaaaa caggcactct tacacaagtt gccgaaactt ctaaattttt
    20341 atgtaaaatt ttttgagttt cattgaccat tttaagttct tctttagtgt aatcattatc
    20401 cataaaaaca tcaatttgtg gaataagatt aagtgccaaa gtataaggaa aagtttgagg
    20461 ttcaaattca tcaagtttaa aagcaaaaaa actttgcatg gcttcaacca attcttgcat
    20521 tccttctttt cctgctccac ttgcagcctg ataggtactt acatcaacac gctttaaatt
    20581 aaatgcatca tttaaaggtt ttaaaacttg caccatttgt atagtagaac aatttggatt
    20641 agcaataatc cctgtttttt tccaatcttt aatatcctca ggattgcatt caggaaccac
    20701 caaaggaaca tctttttcca ttctaaaatg acttgtatta tcaataacaa cagcaccaga
    20761 ttctactgca aatttagcat atttttcact cacacttcca cctgcgctaa aaaaagcaat
    20821 atcaatagga ttttctttaa atacattttc ggtaagttct ttgactttat aagctttgcc
    20881 tttaaattct acttcactac ctacactttt tgcacttgct aaaggtaaaa tactttccac
    20941 tgggaaatca agttcatcta aaacatttaa aagctcttcc ccaaccgcac cagtagcacc
    21001 cacaatggct attttttgtt tttttgacat tacttatcct ttatttgata ttttttaatt
    21061 ttttcattta aaatttttat atctatacct aaaatttgag aagcttgatc cttgtcataa
    21121 tctacactta aaagaacttc acaaatcaat tctttttcta aattctttac atcttttttt
    21181 atacttctag cttctaagaa caaatcttca cttgaaattt catcattttc acttaaaata
    21241 caagctcttt gtacaacgga tattaattct ctaatattac caggaaaatc atattcaagt
    21301 aaagcatttt tagcttcttg gctgagctgt ttttccttaa aatcatattc tttacaagta
    21361 tcttctaaaa ccttttgagc tatacctaaa atttcttctt tacgctctct taaaggcggg
    21421 atattaatag gaacagtgtt taaacgataa tataaatctg aacgaaattc gccatttttt
    21481 attttttcat ctaaatttgc attagttgca ctgataattc ttacatctat tttgatgctt
    21541 tttgtacttc caagtcgtgt gatttctttt tcttgcaaag ctcttaaaag tttagcttga
    21601 atttcataag gcatttcacc aatttcatct aaaaacaaag tgccctcatt agccatttca
    21661 aaaagcccta ttttagttgc attagcatca gtaaaagcac ctttttcaaa accaaaaagc
    21721 tcactttcaa tcaaatttgc aggaatggct gccatattaa tagcaataaa aggcttatta
    21781 gagcgtttag aatgggtgtg aatataacga gaaaatacct cttttcctac tccactttct
    21841 ccaaaaaaca ttacagaggc atcagtttta gccgcttttt gacttaaatt taatgttttt
    21901 tctaaattag gagaagttga aaaaaaatct ttattttctt cttttttttc attttttttg
    21961 ctttttttat cggctgtttt ttctcttatg attttagcac gcttaatagc ctcgactaaa
    22021 gtatcaacat caaaaggctt ggttaaaaaa tcttttactc ccaaacgaac cgcttctata
    22081 gcacggctta aagtagcatt tcctgtcata ataataaaat catatttatt ttcacaggct
    22141 ttaacaaatt ctatgccatc aattcctggc atattaatat ctgtaataat caaatctgta
    22201 ttatcatcta ttttttttaa agcttcagtg gcagatttat aagatttaat attaaattct
    22261 tcatactctg ctaatgcaat ttctaaggat ttgcgcatat taatatcatc ttctactatg
    22321 actaaattca tcctaagcct tttaaaaaat ttctactata gtatccaatt tgcgcttaat
    22381 tttgaattta ctttttttta agataataaa ttatcgcatt ttgttcgcca aattctacgg
    22441 taaaacgcaa gggtaaaatt ttaacataag tttcactttg agcacgtaat aagtcagtat
    22501 taacaatatc cttaacactg attctagctc ctataaagca atcgcttaat tcatctttat
    22561 gagaatttaa aaaattaaat ttaattgttt ttggcatatt atcatcaatc aatcctaaag
    22621 aagttcgagg taaaactttt aaatcttgat cactataaga aatttcacat acccattgtt
    22681 cttcaacatt ttcgctttgc gtcattgcta aggataaatt ttgattttga tgaaagagaa
    22741 tgaaattttt actagaaagc tctgcccaaa aaataaattc atcttgggca aaaagcttaa
    22801 agctaagaaa gattaataag caaacaattc tttccacttg tctgcatcga ttttaagttc
    22861 taagtttact ctataaagcc cttgattaaa attctcatca ataatacttg cattttttat
    22921 caaaccattt acttgcgcag taatagttga acttctaagc attgcatctt ttacagtgtc
    22981 tttaccattc actttcacac cataaagttt acttgcaagc tgtctgtaag catctgtaat
    23041 cgctgctctt tttgctaaag ctagagcttg agcagtagaa actgtattca ttggagcaat
    23101 tccttcacca actgctgtaa aactaagttc cgtttcgcta gcatctggag ccaacatttt
    23161 ttcttctctg ataatatcac gcacatcatc tttatcgact ttttgcacga taacatcttg
    23221 agatggagca gtgctatttg cacttgaatt tttagttgca ctgtttgcac ttggtacaca
    23281 accagcgaaa attcctgcta ttgctagcat aaaataaatt tttttcattt ttacaccttc
    23341 aaaatattgt aattagtaaa ataaaaagca ataagcgttc caactttaaa cttattgcaa
    23401 atctaaacca aagttttcat cgcttaactc atcctcgtca ttttcctctt taggacactt
    23461 agcgatgcta accacctcgt cattttccac attaactaca atgacaccac tcgtattacg
    23521 ccctgctttt ctaatgcttt gcatatcaac acgtatcatc ttacctgaac ttgtaagagc
    23581 cattaaatcc atagtttcat ctactataac tacgctaata agatctttgg ttttttctgt
    23641 aagtttcata caaattacac ccttaccacc tctgctttgc aatctatatt ctccagcatt
    23701 ggtgcgtttt cctatacctt ttgcacttat gcttaaaatt tcttgctcat cattttctat
    23761 aacaactgca cctactaatt cgtcattttt ctctttaaac ttaatagccg tcaccccacg
    23821 acttacacgg ccgatttcac gcactttagc aagtgggaat ttgatacaca tacctttttt
    23881 ggttactgca aagagcattt taccttgtgt gcttacactt tcttcatttt caagattttc
    23941 atcatctaaa ttttcaattt cttgattttc taaattttct tcaccaccag tggcaaaaat
    24001 ttcatcttca tctctttgaa caataatagc agttaccaac tcatcatttt catccaagtt
    24061 gatcgctcta actcctacac ttctgatatt ttgatattca ctcaaatttg tacgctttac
    24121 aataccattt ttagtaaaga aacataaaga tttgctctca tcaaaatccg tggttggaat
    24181 aatagccatg attttttctt cagcttgtaa attgataaga tttaccactg cttttccttt
    24241 agccgttctt gagccttcag gaattttata aactttaagc caataaagct gtccacgatc
    24301 tgttacaaac ataagcgtat catgtgtatt tgccgtaaag aaactttcta taaaatcatc
    24361 atcataagtc gtaacggcta attttccttt tccacctcgt ttttgttttt catattgttt
    24421 actaggcaca cgcttaatat aaccacgatg tgtgatagtt acaaccatat tttcattagg
    24481 aatcaaatct tcaatatcaa tatcatcgta atcatcttca atttgagtaa tacgtggcac
    24541 atcaaattta cttctaattt cttttaattc atcgcgaatt aaattttcaa gcaaggtttc
    24601 actttttaaa atttcttcaa gtcttgcaat ttctttcatt aattctgcaa gttcattttc
    24661 gattttttct ctttcaagtc ctgttaaacg accaagtttc atatctaaaa tagcattggc
    24721 ttgaagctca ctaagaccaa atttagctac taaagaatct cttgcggtat tattatcaga
    24781 actattttta attaaagcaa tcacttcatc tatattatca agtgcaattt taagaccttc
    24841 taaaatatga gctcttgctc ttgccttttg aagttcaaaa atcgttcttc taataataac
    24901 tgtttttcta tgagttaaga aaagatttaa aagttccaac aaagagaaaa ttttaggttc
    24961 tttattatga attgccaaca taatcacacc aaaagtactt tccatagtgg tagatttaaa
    25021 tagattattt aaaacaattt cactcatagc ctcacgttta agctctataa caacgcggat
    25081 tccttcttta ttgctctcat ctcttacttc agatattcct tcaatttgcc tttctttaac
    25141 aagctctgca atctgctcta taagcctagc tttattggtt tgataaggaa gctcatcgat
    25201 aacaataaca tctttatttg tctttttttc aatatgagtt ttagctcgca ctttcacgcg
    25261 accacgccct gtgcgataag cttctataat acctttttta ccataaatta ttccacctgt
    25321 tggaaaatct ggacctttga taaactgcat aatctcttct aggcttgcat ctttattatc
    25381 aagcaaatat aaaagtccat ctatcaactc atttaaacta tgaggtggga tgtttgtcgc
    25441 catacctaca gctataccac ttgaaccatt taataataaa tttggaaccc tagaaggtaa
    25501 aacatcaggt tcgctttctg aaccatcata atttggaaca aaatcgaccg tatctttatc
    25561 tatatctttt aaaagctcat gagaaagttt actcattttt gcttcagtat aacgcatcgc
    25621 agcggcacta tcaccatcta tagatccaaa gttgccttgt cctgtaatac ttggatatct
    25681 catagaaaaa tcttgagcca ttctaaccaa agcatcataa actgctgtat ctccatgtgg
    25741 gtgataacga cctataacag cacccactat acgggctgat ttgacaaaat ctgttctact
    25801 ttttgcctca tcattttgca tagcatataa aattcttcta tgaacaggct ttaaaccatc
    25861 tcttgcgtca ggcaaagcac gacctataat aacactcata gaatagtcta aataactact
    25921 ttttatagaa ttttctatat ctacaagttc aatatcagaa tctttgctaa aaatattctc
    25981 cataaaaatc cttctattag ttcaaagttt tgattatagc atattaaact tttgcatcag
    26041 ctaaaacaag agcaaaaagt acagaaattt tattttcttc taaaactttt ttagcttcca
    26101 aaaggctaga accagttgtt acaatatcat ctactaaaat tacaggttcg tgaatggttt
    26161 ttaagagttt gtaatttctt ttatgttttt gacgaaattc taaacttttt ccagaatatt
    26221 tcacagaatt ttgtgctttt aaaacattaa aaacaggttt tacaaatttt gttttaagat
    26281 atctagctaa aatagcagaa tgtgaataaa gcatatcttc aaccttatca tctaaagcta
    26341 taacattaat tgtcattcta ggatcaaaaa aatctttaaa ttttgcaaaa cttaatttag
    26401 caagcatttt ataaacaaaa taaccataaa aataatgttt agagtgaagc aagtgttgta
    26461 tttcatggta tttataaaaa gaatagactt tgaaattatt atcaagcttt cttacattta
    26521 aggaaaattc ataaagctct agctcgcata attcacaaaa gcagagcaga gcaaaagctc
    26581 cgcaatttat acacctcaaa gttcagagat taaactagct gctttatttg ccatttgttt
    26641 tattaacaaa tgagtataaa aagttgtttc ttttaaatca tcaaaacctt gtacatcttg
    26701 cttggtgcgg attgtaaatt tcttattttt atttatatca ctaacttgta aaactcctac
    26761 tagttttgaa tgtaatccta tagcatcttg agttgctcca taagatataa attctaaatc
    26821 aatcttactc acataaggtg aattttgatc gttattgtca agcacaacta ttcctctagc
    26881 ttcaagttct tgttttaaat aagtataaaa taccgcatta aaattcacat cgacaaataa
    26941 ctttttccct ttagcattta aaaccttttg cccttctttt aaatcataaa atctatgtaa
    27001 ataaaccttt ttcaaagcaa taccagtgtc taaagtgcgt ttattggcac aacattgaat
    27061 tccaacatcg ctaatgtata aaagcccttt aatctttgct tcaaaaccac caggactttc
    27121 acaagaactg cattgagaat ttttagaaat ttgattaact tgagcaaaag tatcttgttt
    27181 agttgcacaa gcactcaaaa ataaaatagg cactataaaa atcaaaaatt ttttaaacat
    27241 tttttctcct tagaaaatta ttttaaaatt gtattaaaaa tacaagcaaa tttcaagcca
    27301 agttttaaat ttatcatcaa tctatcttta aaacactcaa aaaagcctct tgaggtaaat
    27361 ttaccttacc tatagctttc attctttttt taccttcttt ttgcttttct aaaagctttc
    27421 tttttctagt aatatcccca ccataacatt ttgctgtcac atttttaccc atggatttaa
    27481 cagtttctct tgcgatgatt ttatttccaa tacttgcttg aatggccact tcaaaaagct
    27541 gtctaggaac tatttctttc atagcactaa caagttctct tcctttactt tgcgcttttt
    27601 cattaggcac gataatgctt aacgcatcaa cattttcacc cgctacctta atatcaagtt
    27661 ttaccaaatc ccctactcta aattctatag gctcataatc aaaactcgca taaccttttg
    27721 ttaaggactt taatttatca taaaaatcca tcacaatctc atttaaaggc acatcatatt
    27781 ctagcaaaac acgctcaggt gtgatatagt ccattttaac ctgcactcct cttttgcgat
    27841 ttaaaagagt gattaaattc cctaaaaatt cacttggagt aatgatagta gctttaacat
    27901 aaggctcttt tatatgatcg attttattaa caggaggaag ctcgctagga ttttgaattt
    27961 taataagctc tccatcggtt tgataaattt cgtaagtcac agttggagct gtagcaatca
    28021 aatcaagatt aaattctctc tcaagccttt ctttgataac ttccatatgt aaaagcccta
    28081 aaaatcctac cctaaaacca aagcctaagg ccaaagaagt ttcaggctca taagtaatag
    28141 aactatcatt aagctttaat ttatccaaag catctcttaa atcttcaaat ttatccgttt
    28201 ctataggata aagtcccgca aacacaaaag ctttagcctt ttcaaaacca cctatggctt
    28261 ctttagcttt gttttttacc aaagtgatgg tatcgcctac ttgtacatca cctacggttt
    28321 taagccctaa aaccaccaca cctacttcgc ctgattgtaa agattgagtt ttaattggac
    28381 ttaaagggtg gggataaaaa agatcttgaa ctatatgttt tttatccgta ctcatgacta
    28441 aaacttcatc gtttttagca atacttcctt cataaatcct aaccaaagcc aaagcaccca
    28501 aataattatc aaaccaagaa tcataaatta aagccttagt aggagcttca tcatctgttt
    28561 ttggtgcagg gattttagta ataattgttt ctataagctc ttttataccc actcctgttt
    28621 ttgcactcac gcaaattgca tctttgcaat ctatacctat aatatgctcg atttcatgct
    28681 ttactttctc aacatcagca ttaggtaaat cgattttatt aatcacagga atgatttcaa
    28741 gattattttc aagcgctata taaacattag ctatagtctg tgcttcaaca ccttgagaag
    28801 catctactac aagcaaagcc ccttcacaac ttgccaaaga acgactcact tcataagaaa
    28861 aatccacatg gccaggagta tcaataagat ttaaaacaaa attttcatta ttaaatttat
    28921 aatttaaacg cactgattgt gcttttatgg tgataccacg ctctttttct atatccatag
    28981 tatccataac ttgtgaactc atctgcctat cgctaatagc accacactcg ctaataatcc
    29041 tatctgcaag agtagatttt ccatgatcta tatgagctat aatagaaaaa tttcta
//
LOCUS       DAPIYB010000009        29038 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.009, whole genome shotgun sequence.
ACCESSION   DAPIYB010000009 DAPIYB010000000
VERSION     DAPIYB010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 29038)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29038)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29038
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.009"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            7..1515
                     /locus_tag="RJ318_000320"
     CDS             7..1515
                     /locus_tag="RJ318_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HDV7430221.1"
                     /translation="MLIFGVFVFFLNLKILNLKLKPVNLRLFPLIALNLILIIVYVIA
                     LRGPFKHVAINVQNYSFSEYSVVNDTMLNPIMAFSWALKQYKEEAALKAITPLKAQEL
                     KEKLFDYLHQSPINLKAEKNHPSVFVNLMESFGLNLADFTNTEHNFLGSLDKHFKQDF
                     LFKRFLSSSNGTIPSFANLFFVSPFSNISTSKFQKTYLDLTPIAIYKKAGYKVIFVSA
                     GNGSWQNIKNYLSILGVDEIIDENILMKEYNGAKDSENGYGVADEFLYKKVYDLLQKN
                     PHNTLIIALTISNHPPYKIPQNDLPKLQNIPQTLLNMLPYEKDKQDNIIKAYTYANNE
                     FGKFLDKVKQSSFKDNVIIAATGDHRVREMSIDLNSQKAFAYSVPFYLYIPKDLQDDI
                     YYDKDRVGSHKDIFPTLYALSLNNVKYLSVGGRNMLARPSDEKLEFGINDAVWIDKKG
                     IYSGGKGYYFESNDTLKDMNKAFNLDVYTKDFDKFYRELNLYQLAERLGISK"
     gene            1579..2877
                     /locus_tag="RJ318_000321"
     CDS             1579..2877
                     /locus_tag="RJ318_000321"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDV7430222.1"
                     /translation="MMQNIHFIGIGGIGISALARFLKEKGFKISGSDLKESKITNELE
                     KEGVKVSIPHHKDNILNKDLVIYSAAIKEENPEFKHAKELGIKCLSRKEALPLILEDK
                     RVFAVAGAHGKSTTSSILASLLDDASVIIGAILKEFGSNMIYKESQNLVFEADESDSS
                     FLNSNPYLAIVTNAEAEHLDHYGNEVSKLHYAYTQFLDTAKIRVINAEDEFLKNYKNE
                     SIKLYPSKDIKNCTMCIENFKPFTSFELKDLGEFKVFGMGYHLALDASLAILAALNFL
                     DIETIRTRLKNYQGIKKRFDILHADENLVLIDDYGHHPTEIKATLSAAQEYAKLGGYK
                     KITAIFEPHRYTRLAANLKEFAKAFEGVDELIILPVYAAGEKPIELDLKAVFPKALFV
                     EDIKREGKFLVASKGQVFEEGLIIGFGAGDISNKLRQKNE"
     gene            2870..3220
                     /locus_tag="RJ318_000322"
     CDS             2870..3220
                     /locus_tag="RJ318_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430223.1"
                     /translation="MSRFFLYLLIILILALITFALREKLGKKTKPFFGILLVIFIVLA
                     VFFEFENTQKSHLRTDIIVAFNQNKNILCKDINVSKAYFNYEFGTGSFISKDNNQSFN
                     SLIIDIKDCRLNDE"
     gene            3210..5420
                     /locus_tag="RJ318_000323"
     CDS             3210..5420
                     /locus_tag="RJ318_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HDV7430224.1"
                     /translation="MMNDTKEELISKLDLNSYLEEFKALFARDKEIFLQGDSNLHFKR
                     IHELCEVEFPTIPELSNLDKALVHLSKQGILHLDEIFEFVKIFRYFEKLKKIKLGTNL
                     DSWLQKIEFVSGALELCLNFDEKGELKESLDERLVNLNAALRLKNESIIAEFKKFCYT
                     KALMPYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSNGGGFYIVPLSVENLQNDI
                     EKIKNQKEEIYYEYAKNFSAFLAKNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVL
                     CDQSTDLVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSMLLKSMLSAAFLAKH
                     LLPMHIKASESKIGTFKEFDAIIEDPQNVKNDISTFAGRMLHFSRLFSKKNLLLGIDE
                     IELGTDFEEAACLYSVLISKLIANNLKIIITTHHKRLAMLLAKNEQVELIAALYDEEL
                     SRPKYEFLKGTIGKSYAFETALRYQIPPNLVSEAKKLYGEDKENLEELVGKNINLELE
                     LKAKLENVEKKEQKVDEILLSLKEQKEKNEQEFRTSLRNLEFKFHKAIEEAKKTIQLK
                     DIKDKQRSLNKTNELKKEIILPSMEQNEELRVGDFVKYEKIKGKIISISKNDAMVESD
                     GIKLRVPLKLLKKSTPTPKISPKTSISVAKPTNLSVSLDLHGLRSDEAISRLDKFISD
                     ALLAGFDEVLVYHGIGTGKLAFAVREFLKTHKSVKGFNDAPINQGGFGAKVVRL"
     gene            5429..9523
                     /locus_tag="RJ318_000324"
     CDS             5429..9523
                     /locus_tag="RJ318_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDV7430225.1"
                     /translation="MITKDNLKQVLENLGFKNKNENYVKTINNYTLLIDYKNQSINYP
                     KEIKIHDKTTSNFSHPENFVVFECVHRLLEKGYKAEYLELEPKWNLGRDKKGGKADIL
                     VKDNENNPYLIIECKTTDSKNSEFIKEWNRMQEDGGQLFSYFQQEKGVKYLCLYTSDF
                     SDKLEYKNYIIQAYDNEEYLKEKELQNSYKKSNNNIELFKTWKESYELQYFKQGIFEE
                     NVNAYKILEITPTFDNLKELKEEGKYHEFAKILRKHNISGKENAFDKLVNIFLCKIYD
                     ETFNKNNLKFGYFGVMADTYANMQDRLMWLYKEAMKEFLGEKITFVSNEDIEKDFKQL
                     KIKTLKEVMQNYIKELKFYSNNDFAFLEVHNKELFLKNALVLKEIVELFANYKLTQNS
                     TNQFLGNLFELFLQKGMKQDEGQFFTPIQICEFIMYSLPLQEMLSKSSKTLRVIDYAC
                     GAGHFLNTYANELKRYLTEDELKEHYKNIYGIEKEYRLSKVSKVSSAMYGQNEINILY
                     ADALASFELANTNNLEGEKAKPQIESNSFDLLIANPPYSVKGFLETLSDKSKNTYKLF
                     NDDINMETNNSIECFFCERANQILNDNAKAAIILPSSILNKDSIYKNTREILFQNFDF
                     IAIVELGNQTFGATGTNTIILFLRKKETFKQENHLISQDYSLIKERIEAENLKDNESF
                     YQNYLSAYCDFRKFDKELYSNFLNGNLDSKLAELEAFKDYRNAFRQTSDYKRLKESKI
                     YKESKDKQDLEDKAFLAYAQAIEKDKLLYFSLSLNQEVLIIKSPSDIKEQKKFLGYEW
                     SNRKGDEGLKELYNPYLSPLFERDNPQNETKLNTLIYKSFLNTLDVIPQELQIYATKA
                     RLVDMMDFEKVEFNKAISLNPSNSMQSEMSNPFINSKFELVRLKDFVLDIQTAKRPSG
                     GVGKYENGALSLGGEHIDNKSGYIKLDNPKYVPIKFYESFALQDKGIVKQFDILICKD
                     GALTGKIAMVRNEFIRKSAMINEHIFLLRCDNIAKQKYLFYILHSYSGQQALKSKITG
                     SAQGGINKTNLESILIPNADFEIQKQIVAECEKVEEQYNTIRMSIEEYQNLIKAILQK
                     CGIIDDGGGYELNSILENLQKLEFKLDFNLLLSLIEEQISHSEVLVEETQSKERKQDF
                     NAFKNFSKTIQELLQTLSTPPKDGWKRISLKNEQYMELNPSKKEISKLDENMLVSFIE
                     MASVSDKGYIQSKIDRSLNEVRKGYTYFIENDILIAKITPCMENGKCAIAKNLTNNIG
                     FGSTEFHIFRAKTGLDSSFLFYNLNQQNIREKAALAMTGASGHKRVPISFYENLTIPL
                     PPLEIQEKIVQNIELVEQQIDFLNLKLELLEKEKEKILQKYLFS"
     gene            9566..10267
                     /locus_tag="RJ318_000325"
     CDS             9566..10267
                     /locus_tag="RJ318_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HDV7430226.1"
                     /translation="MKNIMILSGAGLSAPSGLKTFRDNDGLWEEYDVMEVCSATGFRK
                     NPKKVLDFYDARRAQLQNVKPNHAHEKIAQLKEKWGKNLFVITQNVDDLLERAGCKDV
                     VHLHGFLPELRCLKCEGIFNIGYEKFTDKQCPKCKSKDLRHNIVMFEEQAPAYATLYS
                     LLHQTSLFISIGTSGAVLPVGQYASMCEKSILNIYEKDVNLERYFDKIYIEDIISAID
                     KIALDIENFMKDGNV"
     gene            10260..10859
                     /locus_tag="RJ318_000326"
     CDS             10260..10859
                     /locus_tag="RJ318_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HDV7430227.1"
                     /translation="MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGA
                     FSIDMLYLFLLQFGLLNFLDNVIFMRFLAIFGFCFLTYMAYLMLRKKKESLNLEHKEF
                     KESLLKSYIKGIILNGSNPYVIGFWLSAASVVLSSDHAYLMTLGLVVAILFWVSALAF
                     VVARYSHVFSAKVVFIINIISAIIIEYFALNLLYKTFLG"
     gene            10863..11960
                     /gene="dapE"
                     /locus_tag="RJ318_000327"
     CDS             10863..11960
                     /gene="dapE"
                     /locus_tag="RJ318_000327"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDV7430228.1"
                     /translation="MNAKEFLIELLKFKSVTPNDDGALNFIAMELSDFEAFFIEKEGI
                     KNLLLTKKFKDEGEHLAFGGHVDVVPAGEGWSNNAFVPMEKEGFIYARGAQDMKSGVA
                     AFVDAVKNADFKGARLSLILTSDEEGEAIYGTKAVLEWMQERDMLPDYAVVAEPTCVK
                     KIGDSIKIGRRGSINGKLLIRGKQGHVAYPEKCINPVHDFAPVLKLLAGFDLDPGSAE
                     FSPSKIVITDIRGGMGVCNVTPNDLKLMFNVRNSPDTSLEDVKSYVEKICHGLNYELE
                     LKQSSEAFLTNIDNKIVQKMNESVQKITHEVPELNTKGGTSDARYFAKYGVKVVEFGV
                     CNDRIHAIDERVSIEEFEKLCLVFKDLIENF"
     gene            11970..12161
                     /gene="thiS"
                     /locus_tag="RJ318_000328"
     CDS             11970..12161
                     /gene="thiS"
                     /locus_tag="RJ318_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HDV7430229.1"
                     /translation="MIINGQKLELKELKFMDFIKEKGLKIELIALELNGEIIPKSEFE
                     NLILKENDKAEIVSFVGGG"
     gene            12158..12961
                     /gene="thiF"
                     /locus_tag="RJ318_000329"
     CDS             12158..12961
                     /gene="thiF"
                     /locus_tag="RJ318_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine biosynthesis protein ThiF"
                     /protein_id="HDV7430230.1"
                     /translation="MMRVKFNGKELDTDFKTSLEFFENISKNENDVWIINGFATKENI
                     ALNENDELFCIEKNTLPPKDALDAMMRARHTPKLHDKLKNGRVAVCGLGGLGSHIAIN
                     LARSGVGYLKLIDFDVIEPSNLNRQAYRVSDLGKFKTEALKEQISEINPYISVEICTL
                     KIDEDNLKSLFKDIDIVCEAFDSAIAKAMIAQNFHRFYKDSVLICASGLAGYGDSNSI
                     QTRKIAKNFYVCGDLVNGAKLGNGLMAPRVNICAGHQSNLVLELLANKE"
     gene            12964..13740
                     /locus_tag="RJ318_000330"
     CDS             12964..13740
                     /locus_tag="RJ318_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HDV7430231.1"
                     /translation="MQENLKNDKLKIGKYEFDSRFILGSGKYSLELIKSAIEEAKAQI
                     ITLALRRANTGEIANILDYIPKNITLLPNTSGARNAEEALRIARLSKELGCGELIKIE
                     VISDSRYLLPDNYETIKACELLAKEGFTPLPYMHADLYAAKAMRDAGAAAIMPLAAPI
                     GSNKGLCAKEFIQILLNEIDLPIIVDAGIGSPSQACEAMQMGVSAVMVNTAIAEAKDI
                     ALMAKAFSLAVNAGRAAFLAGLASVSKAKASSPLTGFLRD"
     gene            13743..14888
                     /gene="thiH"
                     /locus_tag="RJ318_000331"
     CDS             13743..14888
                     /gene="thiH"
                     /locus_tag="RJ318_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HDV7430232.1"
                     /translation="MQDYMQYLPHMQEIKSEILNKVLSQVQSYDESQFSAKDVKNALN
                     QTHLSIEHLKALLSSAAEDFIEELAFKSAKVKQKYFGNSISLFTPLYLSNYCNSKCVY
                     CGFQKGNKIARAKLNEAEIHEEMQAIAKSGLEEILMLTGEGREFASVEYIANACKIAR
                     EYFKVVGVEIYPMNEDEYKILHEKGCDYVTVFQETYNPLKYSKIHLAGEKRIFPYRFN
                     AQERALKAGMRGVAFAALLGIDDFRKDALATALHAHFLQQAYSHAEISISVPRLRPII
                     NNAKIHPKDVSEKRLLQVLCAYRLFLPFAGITISSRERIGFRDEVIKLGATKMSAGVS
                     VGIGEHKGEKKGDEQFEISDDRSVDEILAMLKRSNLQAVMSDSIYVG"
     gene            14878..15483
                     /locus_tag="RJ318_000332"
     CDS             14878..15483
                     /locus_tag="RJ318_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDV7430233.1"
                     /translation="MWDKKIIAISDRKCVEIDFLKQIEKLAKAKVDAIVLREKDLSEF
                     EYYDLAKEVLSICAKQKVTCFLHFFDRECLKLGHRYFHAPLSLLRKEPKLTKYFHILG
                     TSVHSKEELLEAMSYKVNYAFVGHIFESSCKMGLEPKGIDFLKSLLEFSQIPLYAIGG
                     INAQNIENFKDINVVGVCMREILMKEKDLKKYLLECRQNLR"
     gene            15480..16370
                     /locus_tag="RJ318_000333"
     CDS             15480..16370
                     /locus_tag="RJ318_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV7430234.1"
                     /translation="MNKILSLPEDLKQLKGVNYKKIKSCTFAKYTQTDTSHSTFVNVG
                     SHLLTFVRKGYKILHTASKDYKINSYETLFLKAGSYTLSNVGLSKGVYEAYLFFFDNA
                     FLIELIYKYKDFFKLDQKFQNYEIFWVKNDKILQGILESFSPHFEENTQILDPIVSLK
                     FEEIFLHLLLNKNIYFISFLSGILKEFRLDLSQLFEYCGREFLSVNEMSNFAKLDLAT
                     FSKEFKKCFGQSPKKWLDEKRLQKAKILLKFSKKNINEIANECAFSSVAWFIERFKEK
                     YEQTPKQYQKTKNLYFLSKN"
     gene            16433..17284
                     /locus_tag="RJ318_000334"
     CDS             16433..17284
                     /locus_tag="RJ318_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7430235.1"
                     /translation="MKKYVLSLALLGSLLGASELKYQEFDGFKSPESIFVDKNYVYVS
                     NVGEKLEPLAKDNDGFISKLDKNGKVLEYKFLTHLNAPKGMMEIGKTLYVVDIDVLRG
                     FDLKTKKEIFNLPIKGAIFLNDIEKLDDNTLLVSDTGTGLILKVDLKTKQYDELLKLD
                     LAKFGGPNGLYLDRKKHKLFITGYHPDGVSGGVVMAYDLNTKELSIIKNEKESYDGIV
                     PYKDGLLVSSWGNNLNGYIYNLDNVKSVKLELPLMKGPADIFIEGNILWIPKMAEGKI
                     FKVELNK"
     gene            17292..18454
                     /locus_tag="RJ318_000335"
                     /pseudo
     CDS             17292..18454
                     /locus_tag="RJ318_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344435.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CynX/NimT family MFS transporter"
     gene            complement(18425..19453)
                     /gene="murG"
                     /locus_tag="RJ318_000336"
     CDS             complement(18425..19453)
                     /gene="murG"
                     /locus_tag="RJ318_000336"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDV7430236.1"
                     /translation="MTIALTGGGTGGHLAIVRCLLESAIKKNIECVYIGSQNGQDKAW
                     FENEVRFKENFFLSSKGVVNQSKFDKISSLLHTLKLSKDCREIFKKYHIQAVFSVGGY
                     SAAPASFAALFSHLPLFIHEQNSKSGSLNMLLKPFATKFFSAFEKEISPYPVADKFFD
                     NARIRKELKNIIFLGGSQGASFINELALNLAPKLQEQNIKIIHQCGKNDFEKCKKHYQ
                     SLNIQADIFDFSLNLEEKMKNADLAISRAGASTLFELCANTLPTIFIPYPYAAKNHQY
                     FNAKFLQDQALCQIFMQNSINLDEFFKSILKLNLENISTRLQNITQKNGADMLIQKAL
                     FDNLTFIR"
     gene            complement(19450..20613)
                     /gene="ftsW"
                     /locus_tag="RJ318_000337"
     CDS             complement(19450..20613)
                     /gene="ftsW"
                     /locus_tag="RJ318_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HDV7430237.1"
                     /translation="MVADKRLFYLSCILITIGIVFSYSLTAFTVLFLDYSEFHFFIRQ
                     LFFGISGILIMFFISRLDPNKALSKKIILAILIISFIFIIILPFLPSVLATASGGAKR
                     WIRLGPLSISPVEFFKIGLIYFLAWSYTRRIDDSKKAIRHEALILLPYCILASIVIGY
                     IYITQNDLGQSVISFFLILALAFFAGASKRLFAFGTLIIMMIGIMVIFSNQRRIQRIA
                     SWWGNIQDAFLPMLPDWLANALRVSSNSEPYQISHSLNAIAHGGMFGEGLGLGTFKLG
                     FLSEVHTDFVLSGITEEIGLLGLGVICYIYLWMILRIFRIAGRCEAKQDFIFCSGIAL
                     LLLFSFFMNAFGIISLTPLKGVAVPLLSYGGSSMWAICIGIGYVLMISKKVKL"
     gene            20753..22198
                     /locus_tag="RJ318_000338"
     CDS             20753..22198
                     /locus_tag="RJ318_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase subunit A"
                     /protein_id="HDV7430238.1"
                     /translation="MNQIHKILIANRAEIAVRVIRACRDLHIKSVAVFTEPDRECLHV
                     KIADEAYRIGTDAIRGYLDVVRIVEIAKACGADAIHPGYGFLSENYEFAKACEDAGII
                     FIGPKSEVIHKMGNKNIARKLMAKNGIPIVPGTEKLNSYSMEEIKIFAEKIGYPVILK
                     ASGGGGGRGIRVVHKEQDLENAFESCKREALTYFNNDEVFMEKYVVNPRHIEFQILGD
                     NYGNIIHLCERDCSIQRRHQKVIEIAPCPGISDNLRKTMGVTAVAAAKAVGYTNAGTI
                     EFLLDDYNRFYFMEMNTRIQVEHPITEEITGIDLIVRQIRIAAGEILDLEQSDIKPRG
                     FAIEARITAENVWKNFIPSPGKIGEYYPALGPSVRVDSHIYKDYTVPPYYDSMLAKLI
                     IKATSYDLAVNKLERALKEFVIDDIRTTIPFLIAITKTREFRRGYLDTSFIETHMQEL
                     LEKTEDRHQENKEEVIAAIAATLKKIRESRE"
     gene            22202..22453
                     /locus_tag="RJ318_000339"
     CDS             22202..22453
                     /locus_tag="RJ318_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430239.1"
                     /translation="MDFLDSLKSIKKEMQANTNTSKLAKKSSKSGASVKNLEKLAKDI
                     REKNQETNIDKEMQEIFLKQEKLQDEFSEFIKNTDIKKI"
     gene            22453..23172
                     /locus_tag="RJ318_000340"
     CDS             22453..23172
                     /locus_tag="RJ318_000340"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HDV7430240.1"
                     /translation="MLEIGFCTLEDQCPYLKDKCSRIEYKYIENCPKEINNELIKRGW
                     RRFGRYFSRPICKDCDECLSLRILVNEYNFSRSERRVVNKNINTKVILRTPNLSNEHL
                     FLYDKYHRFMEKKKNWKRYDLSFKQYYNLYVDGFMNFGYELAFYIEDKLVCVDLIDIL
                     EDGISSIYCFYDPDFSYFSLGKFSLLNEIQIAKKMNLDYIYLGYFVKKCQSLSYKADY
                     TPNEILKGTKELFENEVLWEK"
     gene            23173..23979
                     /locus_tag="RJ318_000341"
     CDS             23173..23979
                     /locus_tag="RJ318_000341"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDV7430241.1"
                     /translation="MQIVQTLETINVNTDDISVFQYFKDLITKNFTKVIGRKNKIFSF
                     FEENEIPQRRYFLKVLDQKYRKSTNEGIENLQDAHFKTFRLIFEQNNMLKPMLFIKID
                     FVAGRILMKLSSNEKLFITYIRNYFQDHNIEYNEMTNILILEYKNENTLELFEAFADE
                     SEHLKYCVNFEVDREEYKKFRQNIHNKENMKWKFNALAKLFSNYFNTLECTPQNDLSE
                     IRQKYLILVKLYHPDFHQGKSAIEKAYAREQFEKIQIAYDNLKALYKNNT"
     gene            complement(24003..27020)
                     /gene="cmeF"
                     /locus_tag="RJ318_000342"
     CDS             complement(24003..27020)
                     /gene="cmeF"
                     /locus_tag="RJ318_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeF"
                     /protein_id="HDV7430242.1"
                     /translation="MFKLAINRPITVLMFFLALMIFGLISAFSMSVNLFPNVSIPLIK
                     ITSKINGDLNFVESKVTKEIENALSEIDGVKTITSAAYDNFSVSVVEFKLGKNLEVAA
                     NDVRDKIGTLSLPSKPEIEKISSDSGSAISLFLYSKDKLQLMREINDKIKPFLQRVEG
                     VGKIEAKGFLEPQIRIELKPNQLRKYNLNALDVANIIKSQNFKQALGELNNNQDNYII
                     KGYFEATNLEELSNLRIKTGVFLSDIANISSLYEDEKQSALYEGKEGVLLELGKITNY
                     NTLEMIKNVKNALPILEKQIPKDISINMLYDKSLNIHKHLSQVIFDMVLGIFLTLVIV
                     FLFLRNLSTTLIACIAIPTSIISTFFIIDLLGYDLNRLTFIALTLSIGIFIDDAIVVI
                     ENIAKKLKTYPPLQAAFLGINEIGFSVLSISIVLLCVFIPISYMNSISGLFFNALGIS
                     VASGIVISFLVSVFLIPSIGARFLNPKENKFYEKTEAFFEKIEQKYENLLYKILQNKV
                     KFILATLVFIGLSFALATRIGLDFLPMEDDSEIQVLLESKKDLSLEAMKEKSLNLLEK
                     IKNDSNVKYAFLLVGYDDAKDATKAKIYVKLKNLDERNLRQSAIVSLYRQKFQDESLK
                     IKILELPKIEGAGIDDPVQFLILGDDLNTLKEAASQAKEILGTNARIVDISDNANATK
                     DEVALHINKEKAKLLDVNPQYIAGVLGYSFSQLSVGSMDRGNSKDDIILSFAPEFKKD
                     IEALKRISIKNNQGINLELSSVVDFIYSKDLKTINRYNKNRSVKITAGVNDLSLGAVQ
                     KLLLDNMDKILNNNPSLSYAFSGFINLLGETVQGFAMAVALAFVLIYLVLAALYESFI
                     LPLIIMITMPLAFGGASIGLFITGHNFSLFVLIAIILLFGMVGKNAILLVDVANKKCH
                     EGLDPDKALLIAGKSRLRAILMTTFAMIFAMLPLALSRGAGYEANSPMAIAIIFGLIS
                     STLLTLLVVPALFKFCFKLDSKLRKIYEREKLN"
     gene            complement(27023..27763)
                     /gene="cmeE"
                     /locus_tag="RJ318_000343"
     CDS             complement(27023..27763)
                     /gene="cmeE"
                     /locus_tag="RJ318_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeE"
                     /protein_id="HDV7430243.1"
                     /translation="MKKILFLLLVFNCAFGEEIYASFNVEASKQSKLALESIGLVQKI
                     PVEIGQKVSKGELLLALDQESEKIALQNAQNSYQLALVEYENTKSRMQKIKAVENVID
                     KQSYEDMKAKFDAANLNLNKAKINIAYYKNIMAKKELRAPYDAIIANKFIQVGEGVGG
                     VAQPLIEIFSYPQSKLILSFDEKYKDKVRLGDDFFYKIDQNGTELKGKINLIYPSIEV
                     KTRKIYAEVQTTNLTPGLFGEGRIITKD"
     gene            complement(27760..29034)
                     /gene="cmeD"
                     /locus_tag="RJ318_000344"
     CDS             complement(27760..29034)
                     /gene="cmeD"
                     /locus_tag="RJ318_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter outer membrane
                     subunit CmeD"
                     /protein_id="HDV7430244.1"
                     /translation="MFEKYLKSAIFLALYPLAMLASNLHEFIALSQNNESYLIKQMQS
                     EQANLDKEQAFRNYLPSLSLNSAYVANNKDRFIIDPQESLFAKVSLNFLLFDGGAREA
                     NLRALESREKLSLLDKEQNKNYLALNAITLYFNTLSLEKILLANQQKVSFLKSTFERL
                     QKFYDAGLSPKDELESIKAKYHLSLLELSQNELKLANIQKEIKILSDTDFKVQGNAFL
                     ENPQQEKSQNYEVMIAKEQINLAKESVNLAKAEYFPKFYIQDNFNFYKNNYNPKVPAP
                     FANLADQFLEKYSQGNQFILGMEWKIFDFNARAKEVEKERLNVQIANANARFSERKNK
                     EELNYLDKSLKVLQEQILALNLSLNAANLAFESVDKKYQAGLVSYVEYLQALEVKFKA
                     QSDLELAKNEFEITKANYYFNAGIDLNSKVKE"
BASE COUNT        10360 a         3802 c         5028 g         9848 t
ORIGIN      
        1 gctttaatgt tgatttttgg agtttttgta ttttttttaa atttgaaaat attaaattta
       61 aagctaaaac ctgttaattt aagattattt cccttgatag ctttaaattt aatattaatt
      121 attgtttatg ttatagcctt aaggggtcca tttaagcatg tggctataaa tgtgcaaaat
      181 tattctttta gcgaatatag tgttgtaaat gatacaatgt taaatccaat tatggcattt
      241 tcttgggctt taaaacaata taaagaagaa gcagctttga aggctatcac acctttaaaa
      301 gcacaagaac ttaaagaaaa actttttgat tatttgcatc aaagtcctat aaatctaaaa
      361 gctgaaaaga atcatcctag tgtatttgtt aacttaatgg aaagttttgg gcttaatttg
      421 gctgatttta caaatacaga acataatttt ttgggttcgt tagataaaca ttttaagcaa
      481 gattttttat tcaaacgctt tttgagttct agtaatggaa ctataccaag ttttgcaaac
      541 ttattttttg taagtccatt ttctaatatt tccacaagta aatttcagaa aacttattta
      601 gatttaacac ctattgctat ttataagaaa gcaggatata aggtgatttt tgtaagtgca
      661 ggtaatggat cttggcaaaa tattaaaaat tatctcagta ttttgggggt agatgagatt
      721 atagatgaaa atattttaat gaaagagtat aatggagcaa aagatagcga aaatggttat
      781 ggggtagctg atgagttttt atataaaaaa gtttatgact tacttcaaaa aaatccacac
      841 aacaccctta taattgctct tactatttct aatcatccac cttataaaat tccacaaaat
      901 gatttgccaa aattacaaaa cattccgcaa actttgctta atatgcttcc ttatgaaaaa
      961 gataaacaag ataacattat caaagcttat acttatgcaa acaatgaatt tggaaaattt
     1021 ctagataaag taaaacaaag ttcttttaaa gataatgtca ttatagcagc aactggagat
     1081 catagagtac gcgaaatgag tatagattta aattcccaaa aagcttttgc ttatagtgta
     1141 cctttttatc tttatattcc taaggattta caagatgata tttattatga taaagatcgt
     1201 gtaggatctc ataaagatat ttttccaact ctttatgctt taagtttaaa taatgttaag
     1261 tatttaagcg taggcggaag aaatatgtta gcaagaccaa gtgatgagaa attagaattt
     1321 gggattaacg atgctgtatg gattgataaa aaaggtattt atagtggcgg taaagggtat
     1381 tattttgaaa gtaatgatac tttaaaagat atgaataaag cttttaacct tgatgtttat
     1441 actaaagact ttgataaatt ttatagagag ttaaatttat atcaattagc cgagcgttta
     1501 ggcatttcaa aataggattt atattttctt tttagtaaaa aagtgctaaa atttagcctt
     1561 taaagtataa aggtttaaat gatgcaaaat atccatttta tcggcatagg cggtatagga
     1621 atttccgctt tagcaagatt tttaaaagaa aaaggtttta agattagcgg aagtgatctt
     1681 aaagaaagta aaatcactaa cgaactagaa aaagaagggg ttaaggtcag tatccctcat
     1741 cataaagaca atattttaaa caaagattta gttatttatt ctgccgctat caaagaagaa
     1801 aatcctgaat ttaaacacgc taaagaatta ggtattaagt gtctttcacg caaggaagcc
     1861 ttacctctta ttttagaaga taagcgtgtt tttgcagttg caggagcaca tggaaaaagc
     1921 acgacttcaa gtattttagc ttctttactt gatgatgctt ctgtgatcat cggagcgatt
     1981 ttaaaagaat ttggttcaaa tatgatttat aaggaaagtc aaaaccttgt ttttgaagct
     2041 gatgagagcg atagttcttt tttaaattca aatccttatt tggctatagt tactaatgca
     2101 gaagcagagc atttagatca ttatggtaat gaagtttcaa aactccatta tgcttatacg
     2161 cagtttttag atacggctaa aattcgcgtg attaatgctg aagatgagtt tttgaaaaat
     2221 tataaaaatg agtcaatcaa gctttatcca agtaaagata tcaaaaactg caccatgtgt
     2281 atagaaaatt tcaaaccttt tacaagcttt gagttaaaag atttaggtga gtttaaagtt
     2341 tttggtatgg gatatcattt agcccttgat gcgtctttgg cgattttggc ggctttaaat
     2401 ttcttagata tagaaacgat aagaactagg cttaaaaatt atcaaggtat taaaaagcgt
     2461 tttgatattt tacatgctga tgaaaatttg gttttaatcg atgattatgg tcatcatccc
     2521 accgaaataa aagcgacttt aagtgcagca caagaatacg caaaattagg cggatataag
     2581 aaaatcacag ctatctttga accccaccgc tacacgcgtt tggctgcaaa tttaaaggaa
     2641 tttgcaaagg cttttgaagg tgtagacgag cttataattt tacctgttta tgctgcagga
     2701 gaaaagccta tagaacttga tttaaaagcg gtttttccta aggctttatt tgtagaagat
     2761 atcaaaagag agggtaaatt tttggtggct tctaaggggc aagtttttga agaagggctt
     2821 attataggtt ttggcgcagg agatatcagc aacaaattaa ggcaaaagaa tgagtaggtt
     2881 ttttttatat cttttaatca tcttaatttt agccttaatc acttttgctt tgcgtgaaaa
     2941 attaggcaaa aaaactaaac ctttttttgg tattttactt gtgattttta ttgttttagc
     3001 agtatttttt gaatttgaaa acacacaaaa aagtcattta agaacagata ttatcgtagc
     3061 ttttaatcaa aataaaaata ttttatgtaa agatatcaat gtttctaagg cgtattttaa
     3121 ttacgaattt gggacaggaa gttttatttc aaaggataat aatcaaagtt ttaattcttt
     3181 aatcatagat attaaagatt gtaggttaaa tgatgaatga tacaaaagaa gaattgatct
     3241 caaagcttga tttaaacagc tatttagaag agtttaaagc cctttttgca agagataagg
     3301 agattttttt gcaaggagat tctaatctcc attttaaacg tatacatgag ctttgcgagg
     3361 tggaatttcc tactatacca gagcttagca atcttgataa agccttagtt catttaagca
     3421 agcaaggaat tttacattta gatgaaattt ttgaatttgt aaaaattttt cgttattttg
     3481 aaaagttaaa aaaaataaaa ctaggaacaa atttagactc ttggctacaa aagatagaat
     3541 ttgttagcgg ggctttggag ctttgtttga atttcgatga aaaaggggag ttaaaagaaa
     3601 gtttagatga aagacttgta aatcttaatg ccgctctaag attaaaaaat gaaagcataa
     3661 tagctgagtt taagaaattt tgctatacaa aagctttaat gccttatctt atcgatacac
     3721 aaatccatct tataaacaat cttgaagcct tgcttgtaag aggcgggttt aatcacgcta
     3781 ttaaagcaaa aatcataggc agaagtaatg gcggtggctt ttatatcgtg cctttaagtg
     3841 ttgaaaattt gcaaaatgat atagaaaaaa tcaaaaatca aaaagaagaa atttattatg
     3901 aatacgctaa aaatttctca gcttttttag caaaaaatct acctttttta aaatttatca
     3961 atacagcctt tgatcttttt gatcattata gtgctagggt tttgcttgct aaaaaaaggg
     4021 attttgaatt tgttttgtgt gatcaaagta cggatttagt gcttaaaaat ttcgctcatc
     4081 ctgccttaaa aaatccaaaa agcgtgagtt tggaatttaa aaaacaagtt ttaatcatca
     4141 caggggtaaa tgcaggcgga aaatccatgc ttttaaaatc catgctaagc gcagcatttt
     4201 tagctaaaca tcttttgcct atgcatataa aagcaagtga aagtaaaatc ggtactttta
     4261 aagaatttga tgccatcata gaagatccgc aaaatgttaa aaacgacatt tcaacttttg
     4321 caggaagaat gttgcacttt tccaggcttt tttctaagaa aaatttgctt ttaggtatcg
     4381 atgaaataga gcttggaaca gattttgaag aagcggcttg tttgtatagt gtgttaattt
     4441 caaaactcat agctaataat cttaaaatca tcatcaccac gcaccacaaa cgccttgcca
     4501 tgcttttagc aaagaatgag caagttgaac tcattgctgc tttatatgat gaagagcttt
     4561 cacgcccaaa atatgagttt ttaaaaggta ctataggaaa atcttatgcc tttgaaactg
     4621 ctttgcgtta tcagattccg ccgaatttag ttagcgaggc taaaaagctt tatggcgagg
     4681 ataaagaaaa tttagaagag cttgtgggta aaaatatcaa tcttgaatta gaactaaaag
     4741 ctaagcttga aaatgttgag aaaaaagagc aaaaagtcga tgaaatttta ctttctttaa
     4801 aagagcaaaa agaaaaaaat gaacaagaat ttcgtacgag tttgagaaat ttagaattta
     4861 aatttcacaa agccatagaa gaagctaaaa aaaccataca gcttaaagat ataaaagaca
     4921 agcaaagaag tcttaataaa accaatgaac ttaaaaaaga aatcatcttg ccaagtatgg
     4981 agcaaaacga agaattgcgt gtgggggatt ttgtaaaata tgaaaaaatt aagggtaaaa
     5041 tcataagcat ttctaaaaac gatgctatgg ttgaaagtga tgggatcaaa cttcgtgtgc
     5101 ctttaaaact gcttaaaaaa agcactccta cacctaaaat aagtccaaaa acaagcatta
     5161 gtgtggcaaa accgactaat cttagcgtta gcttggattt gcatgggctt aggagtgatg
     5221 aagctatttc aaggcttgat aaatttattt cagatgcttt gcttgcaggc tttgatgaag
     5281 ttttagttta ccatggtata ggaacaggaa agcttgcctt tgctgtaaga gagtttttga
     5341 aaactcataa aagtgtcaag ggctttaatg acgcaccgat caatcaaggt ggctttggtg
     5401 ctaaggtggt gagattataa ggaaataaat gattacaaaa gataatttaa aacaagttct
     5461 agaaaactta ggctttaaaa ataaaaatga aaattatgta aaaacaatca ataattacac
     5521 tcttttaata gattataaaa accaaagtat taattaccca aaagaaataa aaattcacga
     5581 taaaactact tctaattttt cacaccctga aaattttgta gtttttgaat gtgtgcatag
     5641 acttttagaa aaaggttaca aggctgaata tttagagtta gagccaaaat ggaatcttgg
     5701 cagggataaa aaaggtggta aggctgatat tttagtaaag gataatgaaa acaatcctta
     5761 tttgattata gaatgtaaaa ccacagattc taaaaatagt gaatttataa aagaatggaa
     5821 tagaatgcaa gaagatggcg ggcagctttt ttcttatttt cagcaagaaa aaggtgtaaa
     5881 atatctttgt ctttatacaa gtgattttag cgataagtta gaatataaaa attacatcat
     5941 acaagcttac gataacgaag aatatctaaa agaaaaggaa ttacaaaatt cttataaaaa
     6001 atctaataac aatatagaac tttttaaaac ttggaaagaa agttatgaac tgcaatattt
     6061 taaacaaggt atttttgaag aaaatgtcaa tgcttataaa attttagaaa ttactccaac
     6121 ttttgataat cttaaggaac ttaaagaaga aggtaaatat cacgaatttg caaaaatttt
     6181 acgcaagcat aatatatcag gcaaggaaaa tgcctttgat aaacttgtaa atatttttct
     6241 ttgcaaaatt tatgatgaaa cttttaataa aaataatctc aaatttggat attttggtgt
     6301 aatggcagat acttatgcaa atatgcaaga tagattaatg tggctttata aagaagctat
     6361 gaaagaattc ttaggagaga aaattacctt tgtatctaat gaagatatag aaaaagactt
     6421 taagcaatta aagataaaaa ctttaaaaga agtaatgcaa aattacatca aagaattaaa
     6481 attttattca aataatgatt ttgcattttt agaagtgcat aataaagaat tattcttaaa
     6541 aaatgcactt gtattaaaag aaatagtaga gctttttgca aattacaagc ttacccaaaa
     6601 ctctacaaat caatttttag gcaatctttt tgaacttttt ttgcaaaaag gtatgaagca
     6661 agatgaaggg cagtttttta cccctattca aatttgtgaa tttattatgt attctttacc
     6721 gcttcaagaa atgttaagca aaagctctaa aactttaagg gtgattgatt atgcttgtgg
     6781 tgctggacat tttttaaaca cctatgccaa tgagcttaag cgttatctaa cagaagatga
     6841 gcttaaagag cattataaaa atatttatgg tattgaaaaa gagtatcgct taagtaaggt
     6901 ttctaaggta tcaagtgcaa tgtatgggca aaatgaaatc aatattttat acgctgatgc
     6961 acttgcttct tttgaattag caaatacaaa taatttagaa ggagaaaaag caaaaccaca
     7021 aatagaatca aatagttttg atttgcttat agcaaatccg ccttattctg taaaaggatt
     7081 tttagaaact ttaagtgata aatctaaaaa tacttataaa cttttcaacg atgatataaa
     7141 catggaaaca aataattcta tcgaatgctt tttttgtgag cgagcaaatc aaattttaaa
     7201 tgataatgct aaagctgcta ttatcttacc aagttctatt ttaaataaag attctattta
     7261 taaaaataca agagaaatat tatttcaaaa ttttgatttt attgccattg tagagctagg
     7321 taatcaaaca tttggagcaa cagggacaaa tacgattatt ttatttttac gcaaaaaaga
     7381 aacttttaaa caagaaaatc atcttatttc tcaagattat agtttgatta aagaacgcat
     7441 agaagctgaa aatttaaaag acaatgaaag cttttatcaa aattatctaa gtgcgtattg
     7501 tgattttaga aaatttgata aagagcttta tagcaatttt ttaaatggaa acttagattc
     7561 taaacttgca gagctagaag cctttaaaga ttatcgcaat gcatttaggc aaacaagcga
     7621 ttataaaaga cttaaagaat ctaaaattta taaagaaagt aaagataagc aagatttaga
     7681 agataaagcc tttttagctt atgctcaggc gatcgaaaag gataaattgc tttattttag
     7741 tctaagtctt aatcaagaag tcttaatcat aaaatcccca agtgatataa aagaacaaaa
     7801 gaaattttta ggttatgagt ggagtaatag aaaaggtgat gaaggtttaa aagaattgta
     7861 caacccttat ttaagcccac tttttgaaag agacaatccg caaaatgaga ctaagcttaa
     7921 tactttaatc tacaaatctt ttttaaatac gcttgatgtt atcccgcaag aattgcagat
     7981 ttatgctaca aaagcaaggc ttgttgatat gatggatttt gaaaaagtgg aatttaataa
     8041 agctataagt ttaaatccta gtaattcaat gcaaagtgag atgtctaatc cttttataaa
     8101 ttctaaattt gagttagtaa gacttaaaga ttttgtatta gatattcaaa ccgcaaagcg
     8161 tcctagtggt ggtgttggca aatatgaaaa cggtgcactg agtcttggtg gagaacatat
     8221 agacaataaa agtgggtata tcaaattaga taatcctaag tatgtaccaa taaaatttta
     8281 tgaaagtttt gcgttgcaag ataaaggaat tgtaaaacaa tttgatattt taatatgtaa
     8341 agatggtgca ttaactggaa aaattgcaat ggtgcgtaat gaatttatta ggaaatctgc
     8401 aatgattaat gagcatattt ttttattgcg ttgtgataat atagcaaaac aaaaatattt
     8461 attttatata ttacattctt atagtggaca acaagcttta aaatctaaaa ttacaggttc
     8521 ggctcaaggc ggaatcaata aaacaaattt agaatctatt ttaataccaa atgcagactt
     8581 tgagattcaa aagcaaatcg tggcagaatg tgaaaaggta gaagagcagt ataacacaat
     8641 aagaatgagt atagaagagt atcaaaattt aatcaaggca atacttcaaa aatgcggtat
     8701 tatagatgat gggggggggt atgagctaaa ttctatttta gaaaatttgc aaaaattaga
     8761 atttaagctt gattttaatc ttttgctttc gctaattgaa gaacaaatca gtcattctga
     8821 agtattagtt gaagaaactc aaagcaagga aagaaagcaa gattttaatg cttttaaaaa
     8881 cttttctaaa actatacaag agcttttaca aactctctca actccaccaa aagatggctg
     8941 gaagagaatt tctttaaaga atgaacaata tatggaactt aatcctagca aaaaagaaat
     9001 atcaaaactt gatgaaaata tgcttgtctc atttatagaa atggctagcg tttcagataa
     9061 gggttatatt caaagtaaga tagataggtc attaaacgaa gtaagaaaag gctacacata
     9121 ttttatagaa aatgatattt tgattgcaaa aattactcct tgcatggaaa atggtaaatg
     9181 tgctatcgca aaaaatctaa caaataacat aggttttggt agcacagaat ttcatatttt
     9241 tagagcaaaa acagggcttg atagtagttt cttattctat aatctaaatc aacaaaatat
     9301 aagagaaaaa gcagctcttg ctatgactgg agcaagtgga cacaaaagag ttcctataag
     9361 tttttatgaa aatcttacaa tcccactccc accgttagaa attcaagaaa aaattgttca
     9421 aaacattgaa ttagtggaac aacaaattga ttttcttaat cttaaattag aattgttaga
     9481 aaaagaaaaa gaaaaaatct tacaaaaata tttattttct taaagcattt ttcgctaaac
     9541 tttgtaaatt ttataaggtt tagctatgaa aaacattatg atattaagcg gagcgggttt
     9601 gtctgctcca agcgggctta aaacttttag agataatgat ggactttggg aggaatacga
     9661 tgtgatggag gtttgctctg caacaggttt tagaaaaaat cctaaaaaag tacttgattt
     9721 ttatgatgca agaagagcgc aacttcaaaa tgtaaagcca aatcacgccc atgaaaaaat
     9781 cgcacagtta aaagaaaaat ggggtaaaaa cctttttgtc atcacgcaaa atgtagatga
     9841 tttgctagag cgtgcagggt gtaaagatgt agtacatttg catggctttt tgcccgaact
     9901 tcgttgccta aaatgtgaag gaatttttaa tataggctat gaaaaattca cagataaaca
     9961 atgcccaaaa tgcaaaagta aggatttaag acacaatata gtcatgtttg aagagcaagc
    10021 tcctgcttat gctacgcttt attctttact tcatcaaact tcattattta ttagcatagg
    10081 cacaagtggg gcggttttgc ctgtggggca gtatgcttca atgtgtgaaa aaagtatttt
    10141 aaatatttat gaaaaagatg tgaatttaga gcgatatttt gataaaatct atatagaaga
    10201 tattataagc gctattgata aaatcgcact tgatatagaa aattttatga aagatggtaa
    10261 tgtttgattc ttttttaagt ggagtttttt tgggctttgg agtgagtgtg ccttttggac
    10321 ctgtaaatat tttgatttta acttatgcac taaaagcttt taaaaattcc atagctgtag
    10381 gacttggagc atttagtata gatatgcttt atcttttttt gcttcaattt gggcttttaa
    10441 atttcttaga caatgtcatt tttatgcgtt ttttggcgat ttttggtttt tgttttttaa
    10501 cttatatggc gtatttgatg ctaagaaaaa agaaagaaag cttaaattta gagcataaag
    10561 aatttaaaga aagtcttttg aaaagttata ttaaaggtat cattttaaat ggctctaatc
    10621 cttatgtgat aggtttttgg cttagtgctg caagtgtggt tttaagcagc gatcatgctt
    10681 atttgatgac tttagggctt gttgtggcta tacttttttg ggtaagtgct ttagcctttg
    10741 tggtggcaag atatagtcat gtttttagtg caaaagttgt ttttataatc aatataattt
    10801 cagctataat tatagagtat tttgctctta atttattata taaaactttc ttaggataaa
    10861 aaatgaatgc aaaagaattt ttaatcgaac ttttaaaatt taaatctgtt acgccaaatg
    10921 atgatggagc tttaaatttc atcgctatgg aactgagtga ttttgaagct ttttttatag
    10981 aaaaagaagg cattaaaaac cttttactca ctaaaaaatt taaagatgaa ggcgagcatt
    11041 tagcttttgg tgggcatgta gatgtggtgc ctgcaggcga gggttggagt aataatgctt
    11101 ttgtgcctat ggaaaaagaa ggctttatct atgcaagggg tgctcaagat atgaaaagcg
    11161 gagtagcagc ctttgtagat gcggtaaaga atgcggattt taaaggagct agacttagtc
    11221 ttattttaac aagtgatgaa gaaggcgaag ctatatatgg aactaaggct gttttagaat
    11281 ggatgcaaga aagagatatg ctacctgatt atgctgtggt tgcagagcca acctgtgtta
    11341 aaaaaatcgg cgatagtatt aaaatagggc gtcgtggttc tatcaatgga aaacttttaa
    11401 tccgtggaaa acaagggcat gttgcttatc ctgaaaaatg tatcaatcct gtgcatgatt
    11461 ttgcaccagt gttaaagctt ttagcgggtt ttgatcttga tcctggaagt gctgaattta
    11521 gtccttcaaa aatcgttata actgatattc gtggaggtat gggggtgtgt aatgttactc
    11581 caaatgattt aaaacttatg tttaatgttc gcaattcccc tgatacaagc ttagaagatg
    11641 taaaaagtta tgtagaaaaa atttgtcatg gtttaaacta tgagttagag ctaaaacaat
    11701 caagcgaagc ttttttgaca aatatcgaca ataaaatcgt tcaaaaaatg aatgaaagtg
    11761 ttcaaaaaat cactcatgaa gtgccagagc ttaataccaa aggcggtaca agtgatgcaa
    11821 ggtattttgc aaaatacggt gtaaaggtag tagaatttgg ggtttgtaat gatagaattc
    11881 acgctattga tgaaagggta agtatagaag aatttgaaaa actttgtctt gtttttaaag
    11941 acttgataga aaatttttaa aggtttagaa tgattatcaa tggacaaaag cttgagttaa
    12001 aagagcttaa atttatggat tttatcaaag aaaaaggctt gaaaatagaa cttatcgcct
    12061 tggaattaaa tggagagatt atacctaaga gtgaatttga aaatttgatt ttaaaagaaa
    12121 acgataaagc tgaaatcgta agttttgtag gaggtggatg atgagagtaa aattcaatgg
    12181 caaagaactt gatacagact ttaaaacaag tttggaattt tttgaaaata tcagcaaaaa
    12241 cgaaaatgat gtatggatta tcaatggttt tgcaacaaaa gagaatatcg ctttaaatga
    12301 aaatgatgag cttttttgta tagaaaaaaa tactttacct ccaaaagacg cactagatgc
    12361 tatgatgaga gcaagacata caccaaagct tcacgataaa cttaaaaatg ggcgcgtggc
    12421 ggtgtgtggt ttaggcggac ttggatcaca tatagcgata aatttggcaa gaagtggagt
    12481 ggggtattta aagttgattg attttgatgt gattgagcct agtaatttaa atcgtcaggc
    12541 ttatcgtgta agtgatttgg gtaaatttaa aaccgaagct ttaaaagagc aaattagcga
    12601 aattaatcct tatatcagcg ttgaaatttg taccttaaaa atcgatgagg ataatttaaa
    12661 atctttgttt aaagatatag atatagtttg tgaagccttt gatagtgcta tcgcaaaagc
    12721 gatgatagcg caaaattttc atagatttta caaagatagt gttttaatct gtgcttcagg
    12781 gcttgcgggc tatggtgata gcaacagcat acaaacaaga aaaattgcta aaaatttcta
    12841 tgtgtgtggg gatttggtaa atggtgctaa gctaggaaat ggacttatgg cgccaagggt
    12901 aaatatttgc gcaggacatc aaagtaacct tgttttagag cttttagcaa ataaggagta
    12961 aaaatgcaag aaaatttaaa aaacgataaa ttaaaaatag gcaaatacga gtttgattca
    13021 agatttattt taggttctgg aaaatattcg ctagagctta taaaatcagc tatagaagaa
    13081 gctaaagcac agattatcac tctagcttta cgccgtgcaa atacagggga aatcgctaat
    13141 atacttgatt atatccctaa aaatatcaca cttttaccca acacttcagg cgcaagaaac
    13201 gccgaagaag ccttacgcat tgcaaggctt tcaaaagagc ttggttgtgg agaacttatc
    13261 aagatagaag tgataagtga tagtaggtat ttgctgcctg ataattatga aacgattaaa
    13321 gcttgcgagc ttttagctaa agagggtttt acacctttac cttacatgca tgctgatctt
    13381 tacgcagcta aagctatgcg tgatgcagga gctgcggcta tcatgccttt agcagcacct
    13441 attgggagta ataaaggctt atgtgctaag gaatttatac aaattttgct taatgaaatt
    13501 gatttgccta tcattgtaga tgcgggtatt ggaagtcctt cacaagcttg tgaagctatg
    13561 caaatgggag taagtgcggt gatggtaaat acagccatag ctgaagctaa agatatagcc
    13621 ttgatggcta aagctttttc tttggcagta aatgcgggaa gagcggcttt tttagcaggt
    13681 ttggcaagtg tgagtaaagc taaagcaagt tctccattaa caggcttttt aagggattga
    13741 ttatgcaaga ttatatgcag tatttacctc acatgcagga aataaaaagc gaaattttaa
    13801 ataaggtttt aagtcaagtt caaagctatg atgagagtca atttagcgct aaagatgtta
    13861 aaaatgcttt aaatcaaaca catttaagca tagagcattt aaaagccttg ctttcaagtg
    13921 cagcagaaga tttcatagaa gaattagcct ttaaatccgc taaagtcaag caaaaatatt
    13981 ttggaaattc tatctctctt tttaccccac tttatttgtc aaattattgt aattctaaat
    14041 gtgtttattg tggttttcaa aaaggtaata aaatcgcaag agctaagcta aatgaagctg
    14101 aaattcacga agaaatgcaa gccattgcta aaagtggttt agaagaaatt ttaatgctaa
    14161 caggcgaggg cagggagttt gcaagtgtag aatatatagc aaatgcttgt aaaatagcta
    14221 gagagtattt taaggttgtg ggcgttgaaa tttatcctat gaatgaagat gaatataaaa
    14281 ttttgcatga aaagggttgt gattatgtga ctgtttttca agaaacttac aatcctctaa
    14341 aatattctaa aattcattta gctggtgaaa aacgcatttt tccttatcgc tttaatgctc
    14401 aagaaagagc tttaaaagcg ggtatgcgtg gagtggcttt tgcggcactt ttgggtatag
    14461 atgattttag aaaagacgct cttgctacgg cgcttcatgc acatttttta caacaagctt
    14521 attcgcatgc tgaaatttct atttcagtgc cgcgtttaag acctattatc aataatgcca
    14581 aaatccatcc taaagatgta agtgaaaaac gccttttgca agtactttgt gcttataggc
    14641 tctttttgcc ttttgcgggc attaccattt caagtcgtga aagaataggt tttagagatg
    14701 aggttatcaa gcttggtgct actaaaatga gtgcaggagt gagtgtgggt ataggtgagc
    14761 ataagggtga gaaaaagggt gatgagcagt ttgaaatttc agatgataga agcgtagatg
    14821 aaattttagc tatgcttaaa agatccaatt tacaagctgt gatgagcgat agtatctatg
    14881 tgggataaaa aaatcatcgc cataagcgat agaaaatgtg tagaaataga ctttttaaag
    14941 cagattgaaa aacttgctaa ggctaaggta gatgctatag ttttaagaga aaaagattta
    15001 agcgaatttg agtattatga cttagcaaaa gaagttttaa gcatttgcgc aaagcaaaaa
    15061 gtgacttgtt ttttgcattt ttttgatagg gagtgtttaa aattgggaca tcgttatttt
    15121 cacgcaccgc tttctttgct aagaaaagaa cctaaattaa caaaatattt tcatatactt
    15181 ggtacttcag tccatagcaa agaagagctt ttagaggcga tgagctataa ggtaaattat
    15241 gcttttgtag ggcatatttt tgaaagttct tgcaagatgg gtttagaacc taaagggatt
    15301 gattttttaa aatccttgct tgaatttagt caaattccac tttatgctat aggcggtatc
    15361 aatgctcaaa atatagaaaa ttttaaagat ataaatgtag taggtgtttg catgcgtgaa
    15421 attttaatga aagaaaaaga tcttaaaaag tatcttttag aatgtaggca aaatttacga
    15481 tgaataaaat tctttcttta ccagaagatt taaagcaatt aaaaggtgtc aattataaaa
    15541 aaattaaatc ttgcactttt gctaaatata cacaaacgga tacttcgcat tctacttttg
    15601 ttaatgtagg aagtcatctt ttaacttttg ttcgcaaagg atataaaatt ttacacactg
    15661 catcaaaaga ttataagatt aactcttatg aaactttgtt tttaaaagct gggagctata
    15721 ctttaagcaa tgtaggactt agtaaaggag tttatgaagc ttatttattt ttttttgaca
    15781 atgcattttt aattgagctt atttataagt ataaagattt ttttaaacta gatcaaaagt
    15841 ttcaaaacta tgaaattttt tgggtaaaaa atgataagat tttgcaagga attttggaaa
    15901 gtttttcacc gcattttgaa gaaaatacgc aaattttaga tcctatagtg agtttgaaat
    15961 ttgaagagat ttttttacat ttgcttttaa ataagaatat ttattttatt agttttttat
    16021 caggaatttt aaaagaattt cgccttgatc tttcccagct ttttgagtat tgtggtagag
    16081 aatttttaag cgtaaatgaa atgtctaatt ttgcgaaatt agatttagca actttttcta
    16141 aagaatttaa gaaatgtttt ggacaaagtc ctaaaaaatg gttagatgaa aaaaggttgc
    16201 aaaaagcaaa gattttactt aaattttcta aaaaaaatat caatgaaata gctaatgagt
    16261 gcgctttttc ttcggtagct tggtttattg aaagatttaa agagaaatat gagcaaactc
    16321 ctaagcaata tcaaaaaaca aaaaacttgt attttttatc aaaaaactag cacatttttt
    16381 ttatctaaat aaatataatt caatgaaaat atttttaaat aaaggagaaa atatgaaaaa
    16441 atatgtttta agtttagcgc ttcttggaag tttgcttggt gcaagtgaat taaaatatca
    16501 agaatttgat ggttttaaaa gccctgaaag tatttttgta gataaaaact atgtttatgt
    16561 atctaatgta ggagaaaaac ttgaaccttt ggcgaaagat aatgatggat ttatttctaa
    16621 gcttgataaa aatggcaaag tgctagaata taaattttta acccatctta atgcaccaaa
    16681 aggcatgatg gagattggaa aaactcttta tgtggtagat atcgatgttt tacgcggttt
    16741 tgatcttaaa actaaaaaag aaatttttaa tttacctatt aaaggtgcaa tctttttaaa
    16801 tgacatagaa aaattagacg acaatacgct tttggttagc gatactggca cagggcttat
    16861 tttaaaggtt gatttaaaaa ctaagcaata tgatgaatta ttaaaacttg atttagcaaa
    16921 atttggcggt ccaaatgggt tatatctaga tagaaaaaaa cataagcttt ttataactgg
    16981 ttatcatcct gatggtgtaa gtggcggtgt tgtaatggct tatgatttaa atacaaaaga
    17041 actcagtata attaaaaatg aaaaagaatc ttatgatgga atagttcctt ataaagatgg
    17101 tttattggta agttcttggg gaaataatct aaatggatat atttataatt tagataatgt
    17161 taaatctgta aaacttgaac ttcctttgat gaaaggtcct gcagatatat ttattgaagg
    17221 taatatttta tggattccta agatggcaga aggtaaaata ttcaaagtag aacttaacaa
    17281 ataaggcttt tatggcttct tttaaaaaga tattttggat taatgttatt attgttatta
    17341 ttgtagcttt taatcttaga gccccaatta ctgcagtggg gcctattatt gatattatta
    17401 aagataagta ttatttaaac tcaaccgtag caggcatact tacaagtctt cctttgatag
    17461 cttttggaag tatttctttt attgtggggt atttttctcc tattcgtgct attgtttttg
    17521 gaatttttta atttttttag gcgaaattat tcgttcttat tttggtgtat atggcttatt
    17581 tttaggaatg ttagcaatgg gctgtggtat agcaattgca aatgttttac ttcctagttt
    17641 tattaaagaa aaatttccaa aaaaaatggc aagtataatg ggaatttata gtcttgtttt
    17701 gagtatttct tcgattatgg gtattgcttt agctatacct ttgcttagtg tatttgattt
    17761 agctggagct atgtttttct gggctatttt ttcttttgta gctttagtag tttactatcc
    17821 tcaagctaaa aatggtagat tttttcgtat taagaaaaaa gctcataaaa aaatcaatct
    17881 ttttataaat ttaacaactt ggaaaattac tctttttatg ggatttcaaa gttttttagc
    17941 ttattctttg tttttttggt atgttcaaat tgttgtagaa aaaggatttg ataaagaatt
    18001 ttctacaagt atggttttat ttgctcaact tgttgcagct ccagtgtctc tttttggccc
    18061 tttactttta ggaaaattaa gacaaaattt acatactttt tacatagcag gtttgtgcag
    18121 tatgtatgtg atcgcttttg gtatgctctt tatttttgat agtaaaattt ctattattat
    18181 cagtgctttt atcatgggtt ttccatgggg tggagttttt ggcattgcgt tgctttttat
    18241 tgcacaaaaa agctctaatg ctcaaatagc agcgagactt tctgctttag ctcagggttt
    18301 tggatattta attgcagcac aaggacaatg gattataggt tttttgcatg acaaatttga
    18361 aaatttttca tttgctattt tgatgttagt ttttgttgga attttagtaa atatctttgg
    18421 atatttatct tataaaagtc aaattatcaa ataaagcttt ttggattagc atatctgcgc
    18481 catttttttg ggttatattt tgcaatcttg tagaaatatt ttctagattt agttttaata
    18541 ttgacttaaa aaattcatca agattaatag agttttgcat aaaaatttga cataaagctt
    18601 gatcttgtaa aaatttagca ttaaagtatt gatgattttt agctgcataa ggataaggta
    18661 taaaaatagt gggcaaagta ttagcacaaa gttcaaaaag agtacttgca cctgctcttg
    18721 atatagctag atctgcattt ttcatttttt cttccaaatt taaactaaaa tcaaaaatat
    18781 cagcttggat atttaagctt tgataatgtt ttttgcactt ttcaaaatca ttttttccac
    18841 attgatggat gattttgata ttttgttctt gaagttttgg tgctaaattt aaagctagtt
    18901 cgtttataaa gctagctcct tgtgatcctc ctaagaaaat aatatttttt aattctttgc
    18961 gaatcctagc attatcaaaa aatttatctg ctacaggata agggctaatt tctttttcaa
    19021 aggcgctaaa aaattttgta gcgaaaggtt ttaaaagcat atttaaagag ccgctttttg
    19081 aattttgttc atgtataaaa agaggcaaat gtgagaataa agccgcaaaa gatgcaggag
    19141 ctgcactgta tccacctaca ctaaaaacgg cttggatgtg gtatttttta aaaatttctc
    19201 tacaatcttt ggagagtttt aaggtgtgga gtaaagaact gattttgtca aatttgcttt
    19261 gattaaccac tcctttagag cttaaaaaaa aattttcctt aaagcgtact tcattttcaa
    19321 accaagcttt atcttgacca ttttgactgc ctatgtatac acattctata ttttttttaa
    19381 tcgcactttc taataagcaa cgcactatgg ccaaatgtcc tccagttcca ccacctgtta
    19441 aagctattgt cataatttaa ccttttttga aatcattaat acatatccta tgcctatgca
    19501 aattgcccac attgaacttc ctccatagct taaaagtgga accgctacac cttttagtgg
    19561 agtaagagaa ataataccaa aagcattcat aaagaaagaa aaaagtaaaa gtaaggctat
    19621 gcctgaacaa aaaataaaat cttgtttagc ttcacatctt cctgcaattc taaaaattct
    19681 taaaatcatc caaagataaa tatagcaaat aaccccaaga cctaaaagtc ctatttcttc
    19741 agtaattcct gaaagaacaa agtcagtatg cacttcactt aaaaagccta atttaaaagt
    19801 tccaagtcct aggccttcgc caaacattcc tccatgggct atagcattta aagagtgtga
    19861 aatttgataa ggctcgctgt tgctacttac tcttaaagca tttgccagcc aatcaggaag
    19921 cataggtaaa aaagcatctt gtatattccc ccaccaagaa gcgattcttt gaattcttct
    19981 ttggttacta aaaattacca ttatacctat catcataatg attaaagttc caaaagcaaa
    20041 aagtctttta ctagctcctg caaaaaaagc taaagctaga atcaaaaaga aagaaattac
    20101 actttgtcct aaatcgtttt gagtgatata aatatatcct ataactatag aagctaagat
    20161 acaataaggc agaagaatta aagcctcgtg tctgatagct tttttactat catcaatacg
    20221 ccttgtatag ctccatgcta aaaaataaat caatcctatt ttaaaaaatt ccacaggaga
    20281 gatagagagt gggcctaagc gtatccagcg tttagctcct ccgctagctg ttgctaatac
    20341 agaaggtaaa aatggcaaaa tgatgataaa gataaaagaa ataatcaaaa tagctaaaat
    20401 aattttttta gaaagtgctt tattaggatc caatcgagaa ataaaaaaca ttataagtat
    20461 gccactaatt ccaaaaaaaa gctgacgaat aaaaaaatga aactcgctat agtcaagaaa
    20521 aagaacagta aaagctgtaa gagagtatga aaatactatt cctatggtga ttaaaataca
    20581 acttaaataa aataatcttt tatcagcaac cattataatt ataacttttc tttattggaa
    20641 ttaaaatttt aaaaagtttt attataacta aaataaatta aattttttgc taagtttttg
    20701 taaggaaaat ttgctaaaat taacaataaa aatataacaa aaaaggcaaa ttatgaatca
    20761 aatccataaa attctcatag caaatagagc tgaaatagct gttagagtaa tccgtgcttg
    20821 tagagattta catattaaaa gtgttgcagt ttttacagag cctgatcgtg aatgtttgca
    20881 tgtaaaaatc gcagatgagg cttatcgcat aggaacggat gctataagag gatatttaga
    20941 tgttgttcgt attgtcgaga ttgctaaggc ttgtggtgct gatgcgatcc atcctggtta
    21001 tggattttta agtgagaatt acgaatttgc taaggcttgt gaagatgctg gaattatttt
    21061 tataggtcca aaatctgaag taatccataa gatgggaaat aaaaatatcg ctcgtaagtt
    21121 aatggctaaa aatggcatac ctattgttcc agggactgaa aaattaaatt cctatagcat
    21181 ggaagaaatt aaaatttttg ctgagaagat tggttatcct gttattttaa aagcttcagg
    21241 tggtggaggt ggacgcggaa ttcgcgttgt tcataaagaa caagatcttg aaaatgcctt
    21301 tgaatcttgc aaaagagaag ctttaacata ctttaataat gatgaagtat ttatggaaaa
    21361 atatgtagtt aatcccagac atatagaatt tcaaatttta ggagataact acggaaatat
    21421 tatccatctt tgtgaaaggg attgttctat tcaaagaaga catcaaaagg taattgagat
    21481 agcaccttgc cctggaattt cagataatct tagaaaaacc atgggtgtta cagctgtggc
    21541 agctgctaag gctgtaggtt atacaaatgc tggaactata gagtttttgc ttgatgatta
    21601 taatcgcttt tattttatgg aaatgaatac aagaattcaa gttgagcatc caattactga
    21661 agaaattaca ggtattgatc ttattgtaag acaaattcgt attgcggcag gagaaatttt
    21721 ggacttagaa caaagcgata ttaaacctag gggttttgct attgaagcta gaattactgc
    21781 tgaaaatgta tggaaaaatt ttattccaag tcctggaaaa ataggagaat actacccagc
    21841 tcttggacca tctgttaggg ttgatagtca tatttataaa gactatactg tgccgcctta
    21901 ttatgattcc atgcttgcaa agcttattat taaagcaaca agttatgatt tagcggttaa
    21961 taaacttgag cgtgctttga aggaatttgt gattgatgat attagaacaa caataccatt
    22021 tttaattgcc attacaaaaa caagagaatt tagaaggggg tatttagaca cctctttcat
    22081 agaaacacat atgcaagaat tattagaaaa aacagaagat cgtcatcaag aaaataaaga
    22141 agaagttata gctgcaatag ctgctacgct taaaaaaata cgagaaagta gggaataata
    22201 gatggatttt ttagacagtc ttaaaagtat taaaaaagaa atgcaagcta acaccaatac
    22261 ttcaaaatta gcgaagaaat caagcaagag tggtgcaagt gtaaaaaatt tagaaaaact
    22321 agctaaagat attcgcgaaa aaaatcaaga aacaaacata gataaggaaa tgcaagaaat
    22381 tttcttaaag caagaaaaac tacaggatga attttccgaa tttatcaaaa atacagatat
    22441 taagaaaatt taatgcttga gattggtttt tgtactcttg aagatcagtg tccttactta
    22501 aaggataaat gttcaagaat agagtataaa tacattgaaa attgccctaa agaaatcaat
    22561 aatgagctaa taaaacgagg ttggcgtcgt tttggtaggt atttttcacg ccctatttgt
    22621 aaagattgtg atgaatgttt aagtcttaga attttagtta atgaatataa tttttcaaga
    22681 agtgaaagaa gggttgtaaa taaaaatatt aacaccaaag ttatacttag aacacccaat
    22741 ttaagcaatg aacatttgtt tttatatgat aaataccatc gttttatgga aaaaaaaaag
    22801 aactggaagc gttatgattt aagctttaaa cagtattata atctttatgt cgatggtttt
    22861 atgaattttg gatatgagct tgcattttat atagaagata agctcgtttg tgttgatttg
    22921 attgatattt tagaggatgg aatttcaagc atttattgtt tttatgatcc tgatttttcg
    22981 tatttttctt tgggtaaatt ttctttgctc aatgaaatac aaatagctaa aaaaatgaac
    23041 ttagattata tttatcttgg gtattttgta aaaaagtgtc aatctttatc ttataaagcc
    23101 gattatacac ccaatgaaat tttaaaaggc actaaagagc tttttgaaaa tgaggtttta
    23161 tgggagaaat agatgcaaat cgtgcaaact ttagaaacta tcaatgttaa tacagatgat
    23221 attagcgtat ttcagtattt taaagacttg attaccaaaa atttcacaaa ggtcatagga
    23281 cgaaaaaata aaattttttc tttttttgaa gaaaatgaaa ttccacagcg ccgttatttc
    23341 ttaaaagttt tagatcaaaa atatcgtaaa agcacaaatg aaggtataga gaatttacaa
    23401 gatgctcatt ttaaaacttt tagattaatt tttgagcaaa ataatatgct taagcctatg
    23461 ttgtttatca agattgattt tgttgcgggt agaattttga tgaagttaag ctctaatgaa
    23521 aaattattta ttacttatat aagaaattat tttcaagatc ataatataga atataatgaa
    23581 atgacaaata ttctaatttt agaatataaa aacgagaata cccttgaact ttttgaagct
    23641 tttgcagatg agagcgagca tttaaaatat tgcgtgaatt ttgaagttga ccgcgaagag
    23701 tataaaaaat ttcgccaaaa tattcacaat aaagaaaata tgaaatggaa atttaatgct
    23761 ttagctaagc tttttagtaa ttattttaat actttagaat gcactccgca aaatgatctt
    23821 agtgaaatca gacaaaaata tttgattttg gtaaaacttt atcatcctga ttttcatcaa
    23881 ggaaaaagtg caatagaaaa agcttacgca agagaacagt ttgaaaaaat acaaatcgcc
    23941 tatgataact taaaagcact ttataagaat aatacttaaa aaaattaaat taatcatttt
    24001 ggttaattta atttttctct ctcataaatt tttcttaatt tgctatctag tttaaaacaa
    24061 aatttaaaaa gtgcaggtac tacgagtaag gtaagcaaag tcgaacttat aagtccaaag
    24121 ataatggcta ttgccatagg agaattagct tcatagcccg caccccttga aagagcaagt
    24181 gggagcatag caaaaatcat agcaaaagtt gtcattaata tagcccttaa gcgtgatttt
    24241 ccagcgatta aaagagcttt atcgggatct aaaccttcat ggcatttttt attagctaca
    24301 tctacgagta aaatagcatt tttccccacc ataccaaaaa gtaagatgat ggcaataagt
    24361 acaaaaagtg aaaaattatg ccctgtgata aaaagcccta tagaagctcc gccaaaggct
    24421 aaaggcatgg ttatcatgat gattaaaggc agaataaaac tttcataaag tgcggctaaa
    24481 acaagataaa ttaaaacaaa agcaagtgct actgccatag caaaaccttg cacggtttca
    24541 cctaaaagat tgataaagcc tgaaaaagca tagctaagac ttggattgtt atttaaaatt
    24601 ttatccatat tatctagtaa aagtttttgc accgctccta aggaaagatc attcactcca
    24661 gctgtgattt tcacagagcg gtttttattg taacgattga tagtttttaa atctttactg
    24721 tatataaaat ccaccacgct tgaaagttct aaatttatac cttggttgtt tttaatgcta
    24781 atgcgcttta aagcttctat gtctttttta aattctggag caaaacttag gataatatca
    24841 tcttttgaat tgcctctatc catgcttcct acgctaagtt gcgagaaaga ataccctaaa
    24901 accccagcga tatattgagg attgacatct aaaagtttgg ctttttcttt gttgatgtgt
    24961 aaggctactt catcttttgt agcattagca ttatcgctta tatctacaat gcgcgcatta
    25021 gtgcctaaaa tttcttttgc ctgagaagca gcttctttta gagtgtttaa atcatctcct
    25081 aagattaaaa attgcacggg atcatcaatg cctgcaccct ctatctttgg aagttctaaa
    25141 attttgattt ttaaactttc atcttgaaat ttttgacgat ataaacttac tatggcactt
    25201 tgtcttaaat ttctttcgtc taaattttta agtttaacat aaattttagc ctttgtagca
    25261 tctttggcat catcatagcc tacaagtaaa aaagcgtatt tgacattgct atcatttttg
    25321 attttttcaa gcaaatttaa acttttttct ttcatggctt ctaaacttaa atcctttttg
    25381 ctttcaagca aaacttgaat ttcactatca tcttccatag gtaaaaaatc aagccctatg
    25441 cgagtggcta aagcaaaaga aagccctata aaaacaagag tggctaggat aaattttact
    25501 ttattttgta aaattttata gagtaaattt tcatactttt gctctatttt ttcaaaaaaa
    25561 gcttctgttt tttcataaaa cttgttttct tttggattta aaaatcttgc cccaatacta
    25621 ggtattaaaa atacagaaac caaaaagctt ataactatcc cacttgcaac gcttatgcct
    25681 aaggcattga aaaaaagccc tgatatagag ttcatataag aaatagggat aaaaacacaa
    25741 agtaaaacta tacttatgct taaaacgcta aaacctattt cattgatacc taaaaaagca
    25801 gcttgtaaag gcggataagt ttttagtttt ttagcaatat tttcaatcac tactatagca
    25861 tcatcgataa aaattcctat gcttaaggtt aaagctataa aagttaagcg gtttaaatca
    25921 tagcctaaaa gatcgataat aaaaaaagtt gaaatgatag aagtaggtat agctatgcaa
    25981 gcaatgagag ttgtacttaa atttcttaaa aataaaaaca cgataacaag ggttagaaaa
    26041 atccccaaaa ccatatcaaa aatcacttga gaaaggtgct tgtggatatt taagctttta
    26101 tcataaagca tattaatgct tatatctttt ggaatttgtt tttctaaaat aggcaaggca
    26161 tttttgacat ttttaatcat ttcaagggtg ttataatttg tgatttttcc gagttctaaa
    26221 agcacccctt ctttaccttc gtataaagca ctttgttttt catcttcata aaggcttgaa
    26281 atattagcaa tatcacttaa aaatactcct gtttttatgc gaagattgct aagttcttct
    26341 aaatttgtgg cttcaaaata gcctttgatg atatagttat cttgattgtt gttaagttcg
    26401 cctagggctt gtttaaaatt ttgacttttg atgatatttg ctacatcaag ggcgttaaga
    26461 ttgtattttc taagttggtt tggttttaat tctatgcgaa tttggggttc taaaaacccc
    26521 ttagcttcga ttttacctac tccttcaact ctttgcaaaa aaggttttat tttgtcattg
    26581 atttcacgca tgagttgtaa tttatcttta gaatatagaa aaagtgaaat agcagaacca
    26641 gaatctgaac tgattttttc aatttcaggc ttagaaggta ggcttaaagt tcctatttta
    26701 tcacgcacat cattggcagc tacttcaaga tttttaccca gtttaaactc gactacactt
    26761 acactaaaat tatcatatgc agctgaggtt atggtcttta ctccatcgat ttcacttaaa
    26821 gcattttcta tttctttagt gacttttgat tctacgaaat ttaaatcccc atttatcttg
    26881 cttgtgattt ttataagagg tatggaaaca ttaggaaata aatttacact catgctaaaa
    26941 gcagagatta gcccaaaaat cataagagct aagaaaaaca ttagcacggt aataggtcgg
    27001 tttatagcta gtttaaacat ttttaatctt tagtgatgat tctaccttca ccaaaaagcc
    27061 ctggtgttag atttgtggtt tgcacttcag cataaatttt tcttgttttt acttctatac
    27121 ttggataaat aaggttgatt tttcctttca attctgtacc attttgatcg attttataaa
    27181 agaaatcatc gcctaatcta actttatctt tatatttttc atcaaaactt aaaatcagtt
    27241 tgctttgtgg ataggaaaaa atttctatta aaggttgagc tactcctcct actccttcgc
    27301 ccacttgtat aaatttgttt gcgataatag catcataagg tgcgcgtaat tctttttttg
    27361 ccatgatatt tttataataa gctatattga tttttgcttt gtttaaattt aaattagcag
    27421 catcaaactt agctttcata tcttcatagc tttgtttgtc tataacattt tctacagctt
    27481 tgattttttg catcctactt ttggtatttt cgtattctac aagggcaagt tgataagaat
    27541 tttgagcatt ttgaagagct attttttcac tttcttgatc aagagcaagt aaaagttctc
    27601 ctttgctgac tttttgtcca atttctacag gaattttttg aaccaaacct atgctttcaa
    27661 gggcaagttt gctttgtttt gatgcttcta cattgaaact tgcgtaaatt tcttcgccaa
    27721 aggcgcaatt aaaaacaaga agtaaaaata gaattttttt cattctttaa cctttgaatt
    27781 aagatctata cccgcattaa aataataatt tgctttagta atttcaaatt catttttagc
    27841 aagctctaaa tcgctttgtg ctttaaattt aacctctaaa gcttgaagat attctacata
    27901 agaaacaagt cctgcttggt attttttatc tacactttca aaagctaaat ttgcagcatt
    27961 taagctaaga ttaagagcta aaatttgttc ttgtaaaact tttaaacttt tgtctaaata
    28021 atttaattct tctttatttt ttctctcgct aaatcttgca tttgcattgg ctatttgaac
    28081 atttaaacgc tctttttcaa cttctttagc ccttgcattg aaatcaaaaa ttttccattc
    28141 catacctaaa ataaattgat taccttgaga atatttttct aagaattgat ccgctaaatt
    28201 tgcaaaagga gctggaactt ttggattata attgttttta taaaagttaa aattatcttg
    28261 aatataaaat tttggaaaat attcagcttt tgctaaattt acactttctt tagcaagatt
    28321 gatttgttct ttagctatca ttacttcata gttttgactt ttttcttgtt gcggattttc
    28381 taaaaaagca ttcccttgca ctttaaaatc tgtatcgctt aaaattttaa tctctttttg
    28441 tatattggca agttttaatt cattttgact gagctctaat aagcttaaat ggtatttagc
    28501 cttaatgctt tcaagttcat ctttagggct aagtcctgcg tcgtaaaatt tttgcaatct
    28561 ttcaaaagtt gattttaaaa aagatacttt ttgttgattg gctagtaaaa ttttttcaag
    28621 acttaaggtg ttaaaataaa gtgtgattgc atttagggca aggtaatttt tattttgttc
    28681 tttgtctaaa aggcttaatt tttctctgct ttctaaagct cttaaattag cctctctagc
    28741 acccccatca aaaagcaaaa aattaagaga aactttagca aataaacttt cttgtggatc
    28801 gataatgaag cgatctttat tgttggctac ataagctgag tttagactaa gagagggtag
    28861 gtaatttcta aaagcttgtt ctttgtctaa atttgcttgt tcgctttgca tttgcttaat
    28921 gagataggat tcattatttt gacttagtgc tataaattcg tgcaaattag aagctaacat
    28981 tgctaaggga taaagagcta aaaatatagc tgattttaaa tatttttcaa acattttg
//
LOCUS       DAPIYB010000010        28262 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.010, whole genome shotgun sequence.
ACCESSION   DAPIYB010000010 DAPIYB010000000
VERSION     DAPIYB010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 28262)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28262)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28262
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.010"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            108..2345
                     /locus_tag="RJ318_000345"
     CDS             108..2345
                     /locus_tag="RJ318_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013463592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HDV7430245.1"
                     /translation="MDNFIKKAYDIVLKDYFDDFSPPSDNIPFCVLASKAYANNSLCF
                     NESISLIFVYKDIKAFHLKPMIKAFIEILNDAHLQIDSVILEFNGLYNASNELKTSII
                     QTRFICGSRILFKGIKIKFESIIKENKNDFAKLLLENFKEFDIPFIKQEFNILKDFGG
                     LNHLRSLESLLVLFKTSPKNYALNFIDEKKLSELRLAGDFLLSLKSAMNLLSAKDEDE
                     FLLINVHDLSELMYKKAKKHFGANELLVQKALQSMHTIGFYTHFLAKQIQDGLNHTLK
                     QEYKFKTLVEVLEYLLKLEDKHVIFDLNLVFALGRLKYGKKDIEKALILFEKIFYKRH
                     SFCVLKLLLDSGILKDLCKPFWTVRFLSDEEGNYSFDEQVFLMLSEFEKYEDELEILQ
                     KLKTDEKMILKLVILLSAIESENEISLAGIYRAYCSKFDLKNEILEWGLKIFKNNNAL
                     KDLVEKEDIYNPIVVSSLVSKLENLENLELLYTLTWLKAKALNYNAFYFRVLDKLLEN
                     AKQGFEDENLLEESARRVKKELTLKRSKIFLEQDEILQDKIIHIKSNLFIIKNTFEDI
                     VMISKLAKENDFKFWFSNETNLSLQIVAPLHFNIAIILSSLTNLNLIFMNFFELFDDK
                     IYLRFEYDNIISDEQKLKLCELLNSNLSGFNLKKIKKPIIKKDELKLDLNYSKMYAKL
                     GLNTKDQQGLMAYLMNVFNELELVLCAAKIQTIRQRTRNIFIFQKNEKLEHSEQKLVN
                     LLISE"
     gene            2350..4146
                     /gene="glmS"
                     /locus_tag="RJ318_000346"
     CDS             2350..4146
                     /gene="glmS"
                     /locus_tag="RJ318_000346"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDV7430246.1"
                     /translation="MCGIVGYIGNNEKKQIILNGLKELEYRGYDSAGMAVMQEGELSF
                     FKAVGKLENLANKCTDFESQGYGFAIGHTRWATHGKPTEINAHPHLGQYSCVIHNGII
                     ENYKEIKDKLEKEGVSFLSQTDTEVIVQLFEFYARNLGVFEAWQKTIKELRGAFATLL
                     VTKKDPNHVYFAKNAAPLIIGKNANKEWYFSSGDAPLIGSCDEVMYLEDLSLGYASKD
                     ELVVYENDILKSLCFSKLSGDKAYAKKDGFRFFMEKEIYEQSRVMSEVLMGRIQGDEV
                     VFDELNNEDLSQVDEITLCACGTSYHAAMASAYLFERIAKVKAKVEIASEFRYREAII
                     KKDSLFIVISQSGETADTLEALKIAKEQGAKTFAICNVDNSNIVRLAHLSLLTRAGIE
                     KGVASTKAFATQVLTLWMLAIFMAQKRNLNVSAEIKALLHTPNCVSVKQALHEKIHRL
                     SKRYLDGHGFFFIGRDVFYPLALEGALKLKELSYLHAEGYPAGEMKHGPIALADSKLY
                     TIALMPKHMLYEKTKSNVEELIARDSTVLSISPLEFDLSDDFIKTNEQDHYMCEFFEM
                     MVITQLLAMEISIRLGNDVDMPRNLAKSVTVE"
     gene            4149..7274
                     /locus_tag="RJ318_000347"
     CDS             4149..7274
                     /locus_tag="RJ318_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDV7430247.1"
                     /translation="MKKFFCLTLVCKLFALSEFELHHIDKVHKLGYSGDTIIIGVADD
                     AFNQDHISLKDKILKSTYPTDTAGKQLIPDLKKSTHGSHVAGIAVGAKIGDSKPYGVA
                     YGAKFYGAGVFPNGSYTQIPDIYNFFKDVSIINNSWGINFYPYFNLKASNSGLVDCTQ
                     TNQGTSYNICNTPLEYVMKADKVANDMMRLSKDKGVLNVFAAGNEGILSPALHAILPS
                     YDESLRAWLAVGALDANEITLESDGTLIIKSQGLADFSNGFKGATNFSLVAAGVNINN
                     VDSSTNDKFTKKSGTSMAAPMVSGTAALVKQNFPFLDGKQIADILLSTANKNYKAPKF
                     TVKQVTDGTNQPKFLIVYISQDPPGIEDEIKRDLKQLYNGIQVQVNGQWIDYSDYIWD
                     NRDSAQSQKLNTSTISSINGVVRVEKEELFGQGILDAQKALKGLSILDANRLSDQDVL
                     KYEQEPNTAYYTINTAGYDAEFSNDISQRKWDESTHLSSAINKPTHLANLNIGLSKEG
                     EGILIISGQNTYEGATLIKQGELKLKGKVKNNAYVEQKAILSGNGIVGQNLNNKGIVR
                     PGNEDLNDLTVQGTYTQEGVDSKLQLDFGNYKNSKLIAKTYDIKSGNLEYIPLPKYYI
                     LNKPVKINLGDLEKSLSSFNHVLIQNTYALNFDFVLSDDLVSINKTLIKPNLKPNAYE
                     IPNTSLGNALRQLRSRADLSQTYQEFFASLDNGIDVKTKLNRIEGSGYLSTFSNHNQS
                     NLMQNNMLFTLHPLNINNFAQNNNILLASTYLPRIFSNEEYFWHLTPSYKYYKDKDFS
                     GQKTGANISLGENFSSGFLAYALSLSSAKFNFNNGSDLKSYNMDLLLNYNHDLDFIKI
                     LSGLGIGVGFNTLNRFVVEQPIEGKYKTLQTSAQLGVTKDIILGQDFIFNPLMYFTHS
                     FFYQEDFKENKSPFAKNYESLKHHSINANLGFNLAKNIEQDDYQASFSTFVIFEKRIY
                     GRTLENKASFVDFPIAFIQKYKLKDNILSQGFNSEFLYKNNVFWQFMLMNRFSHNAYE
                     LHLMSSVGKRF"
     gene            7330..8721
                     /gene="fumC"
                     /locus_tag="RJ318_000348"
     CDS             7330..8721
                     /gene="fumC"
                     /locus_tag="RJ318_000348"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDV7430248.1"
                     /translation="MEYRVEHDTMGEVKVPNDKYWGAQTERSFENFKIGCEKMPKVLI
                     YAFANLKKSLALVNNKLGKLDDAKKNAIVQACDEIIAGKFDDNFPLAIWQTGSGTQSN
                     MNMNEVIANRATEIMGGDFRKEKLVHPNDHVNMSQSSNDTFPTAMSIVAVEQVEKKLI
                     PALDELIATFEKKVKEFDGIIKIGRTHLQDATPLTLAQEFSGYLSMLLHSKEQIIASL
                     PTLRELAIGGTAVGTGLNAHPELSQKVSEELTQLIGTKFISSPNKFHALTSHDAINFT
                     HGAMKGLAANLMKIANDIRWLASGPRCGLGELIIPENEPGSSIMPGKVNPTQCEAVTM
                     VAVQVMGNDVAIGFAASQGNFELNVFKPVIIYNFLQSLDLLADSMHSFNIHCAVGIEP
                     NRAKIDHNLHNSLMLVTALNPHIGYENAAKVAKNAHKKGISLKESTMELGLVSEEDFN
                     KFVDPTKMIGPKA"
     gene            complement(8751..9794)
                     /locus_tag="RJ318_000349"
     CDS             complement(8751..9794)
                     /locus_tag="RJ318_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDV7430249.1"
                     /translation="MQNGKFFLISFILVILFLLLYLFKGFLLVIIIASLMAVATSNIN
                     AKFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNFDINLVTQTLDYVKN
                     YQFTLPESFNFLEPKIKEFLASIDLNSISKQILSYASSFTKSGAKFLIDMVLICVFYF
                     FANLYGTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGLITI
                     FYGYDGILMGVIFAVSSLIPAIGGALIYMPVSLYEFASNNLNSALVIFIYSVIVISFI
                     ADTLIKPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILTFFVST
                     LRMYVILKDKNLI"
     gene            complement(9798..10805)
                     /gene="ruvB"
                     /locus_tag="RJ318_000350"
     CDS             complement(9798..10805)
                     /gene="ruvB"
                     /locus_tag="RJ318_000350"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDV7430250.1"
                     /translation="MDRIVEIEKYSFDETYETSLRPSNFDGYIGQESIKKNLNVFIAA
                     AKKRNECLDHILFSGPAGLGKTTLANIISYEMSANIKTTAAPMIEKSGDLAAILTNLS
                     EGDILFIDEIHRLSPAIEEVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTR
                     AGMLSNPLRDRFGMQFRLEFYKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPR
                     IALRLLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMDLRYLELLTAAKQKP
                     IGLASIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASAKSYSALKLNYEKTLFE
                     E"
     gene            10896..11306
                     /locus_tag="RJ318_000351"
     CDS             10896..11306
                     /locus_tag="RJ318_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002820028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase"
                     /protein_id="HDV7430251.1"
                     /translation="MGILTKLELDYEIDDIEKFLQFFRTMCDRFEPLIIKLGSDSVRY
                     KEAIKELETLAHNTAWAARRLNLEEVTDFCVFCEEMMAQANRFNGPASDEFTDWMLLM
                     SDQFEKYCRSYENDDSVLAVFNPLIVNVPNIISK"
     gene            11307..11665
                     /gene="ssrA"
                     /locus_tag="RJ318_000352"
     tmRNA           11307..11665
                     /gene="ssrA"
                     /locus_tag="RJ318_000352"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(11750..13834)
                     /locus_tag="RJ318_000353"
     CDS             complement(11750..13834)
                     /locus_tag="RJ318_000353"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HDV7430252.1"
                     /translation="MQTSPDMFINRELSWLRFNSRVLDQCSKNLPLLEKLKFIAIYCT
                     NLDEFYMIRVAGLKQLFSAGVNASSSDEMTPLQQLKAIRKYLHQEKELLERYFNEITS
                     ELEKENLFIKHYENLDENLKQKCDEYFFSNIFPVIVPIAVDATHPFPHLNNLSFSLAV
                     KICDKAHPELVKFGMIRIPRVLPRFYEVSANIYVPIESIVHQHAEEIFPGYKLLASAA
                     FRVTRNADMVIEEEEADDFMMILEQGLKLRRKGAFVRLQIQKDADEQIVEFLNTHMKI
                     FHKDVYEYSILLNLPSLWQIAGNKTFTHLLSPLYTPKTLPPFDENLSIFDAVEKEDIL
                     IIQPFESFDPVYKFIKEASKDPEVISIRMTLYRVEKNSNIVQALIDAASDGKQVTVMV
                     ELKARFDEENNLHWAKALENAGAHVIYGITGFKVHAKVSQVIRKQGDKLKFYMHLSTG
                     NYNASSAKIYTDVSYFTSKAEFARDTTSFFHILSGFSKNRRLQTLSMSPNQIKEKVLE
                     MIRIETSKKNEGVIVAKMNSLVDSDIIQALYEASMEGVQIDLIIRGICCLKPDEEYSK
                     NIRVRSIIGKYLEHARVFYFKHSEPNYFISSADWMPRNLERRLELMTPIYDERSKAKL
                     AQFLRLQLSDNVLAYELKNNGEYEKIPSSEKIIDSQQTLEEYVSKIYKTLKKDTDQSR
                     ATHLASKLFKEN"
     gene            14023..14538
                     /gene="nrfH"
                     /locus_tag="RJ318_000354"
     CDS             14023..14538
                     /gene="nrfH"
                     /locus_tag="RJ318_000354"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HDV7430253.1"
                     /translation="MIILRRKILKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLS
                     NASESCNNCHIMNEVYNEYMAGPHSQKVKGEPRATCVDCHLPHNFVAKWIAKAQSGLG
                     HAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
                     CHKDVGHKHGI"
     gene            14553..16385
                     /locus_tag="RJ318_000355"
     CDS             14553..16385
                     /locus_tag="RJ318_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HDV7430254.1"
                     /translation="MKKNILRLGIVVLVLLIAGVLWLNNDINQKKEDEANKNAIAANA
                     DFSLLSDDDPNFEKWGKVFPEQLKMYLTVEKEEPKATEFGGNLAYSKLIRFPQLTILW
                     AGYPFSLDFNEERGHFWVQVDQMKTARNNKDFLNAHGLAAFKGQPAACMNCHSGWTPW
                     LIKNVAKGDFTAFNSTNYWTMIKNIPAVDGIVENSPEHAGPHGGKRMGVTCADCHNPN
                     DMSLRLTRPAAINALVSRGYEKDPVQGVKATREEMRTLVCSQCHVEYYFKPTGEKVKV
                     MGETIVDDSSKKWWNGTQKNYDEYEFWRDGNKVKEIETDGIVLTFPWSEWKKGQPFRI
                     EMLDDYYDKVRGVFGADFTHKLTGAQIIKIQHPESELYSGGVHAANGVSCVDCHMPYV
                     REGAKKVTQHNITSPLRDINSACKSCHKQSEDYLKAQVLDIQNSVAHDQRTAEYAIVS
                     LIMDTKKLRDELGNMEKFQSDGKADAKKISEELKEVLELHRKAQMRADFVNAENSTGF
                     HNPREASRMLLQAVDMARMGQTKLVEIAAANGIKDFKTSNLGFEDIQKFNPGELYYKV
                     DVNNHKAGERYYADEKDVNGNPPKELLEHDKELAPYNYQVIDKK"
     gene            16521..17075
                     /locus_tag="RJ318_000356"
     CDS             16521..17075
                     /locus_tag="RJ318_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430255.1"
                     /translation="MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYIFGINQDVGLK
                     VEQYQLSKVIESGKEREALIEYLKTNGLKVPSNTNIIKSKDKGITIGGTHYSANITQN
                     STNEYNITLKTRSLLGDMIMLHKDKGAWYFSVLSVGFGITLFMLYISGLMITLFANKK
                     DRSKQFAVLGVGVVVTLLLAYLSL"
     gene            17139..17228
                     /locus_tag="RJ318_000357"
     tRNA            17139..17228
                     /locus_tag="RJ318_000357"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17173..17175,aa:Ser,seq:gct)
     gene            complement(17301..18293)
                     /gene="ceuB"
                     /locus_tag="RJ318_000358"
     CDS             complement(17301..18293)
                     /gene="ceuB"
                     /locus_tag="RJ318_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin ABC transporter substrate-binding
                     protein CeuB"
                     /protein_id="HDV7430256.1"
                     /translation="MKKSLVFAFFAFFLSLILTACNSNSNENNASSTTKTNTATVKVL
                     PISMSDEGDSFLVKDSLGENKIPKNPSKVVILDLGILDTFDALKLNDKVVGVPAKNLP
                     KYLQQFKNKPSVGGVQQVDFEAINALKPDLIIISGRQSKFYDKLKEIAPTLFVGLDNA
                     NFLSSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAKSIVDEDKKALIILTNSNKIS
                     AFGPQSRFGIIHDVLGINAVDENIKVGTHGKSINSEFILEKNPDYIFVVDRNVILGNK
                     ERAQGILDNALVAKTKAAQNKKIIYLDPEYWYLASGNGLESLKTMILEIKNAVK"
     gene            complement(18306..19061)
                     /locus_tag="RJ318_000359"
     CDS             complement(18306..19061)
                     /locus_tag="RJ318_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7430257.1"
                     /translation="MIKLKNITKFYDNKVIISDLSLDFHKGKITSIIGANGAGKSTLL
                     ALASRLIKPSSGEIYIDGMNLKNYKEQILAQKISILKQQNNINLRLKVEELVAFGRFP
                     HSQGRLNTNDKIKINEALEYMELSNLRNEFLDTLSGGQKQRAFIAMIIAQDTEFIMFD
                     EPLNNLDMKHSVQIMQLMKNLVKDFNKSIAVVLHDINFASIYSDEIIALKDGKLLKQG
                     SKDEIINQENLKQIYDMDIPVSQINGKKICIYF"
     gene            complement(19058..19996)
                     /locus_tag="RJ318_000360"
     CDS             complement(19058..19996)
                     /locus_tag="RJ318_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDV7430258.1"
                     /translation="MRKKMLILSFLTLNMIGIFIFVGLNGFDEYALKSRFLQIAAIII
                     VAICIAVSTVIFQTLCNNKILTPAIIGLDSLYMLLQSALIFSFGAANLSVYKNDINFL
                     ITLVCMVVFSLGLYKILFSSDRSIYLIMLLGLVFGTLFSTLSSFFEVLIDPDEFMVIQ
                     GRMFASFDNIAFDVLILAYIISFLSFIWIFRYMKFLDPLNLGKDLAINLGINYQKISK
                     QLMIIIAILTSISTALVGPITFLGLLVVNITYELFKTAKHSILLSACILISILALLGG
                     VFFVSRVFDYNATISVVINFLGGIYFIYLVLKGNKL"
     gene            complement(19989..20957)
                     /locus_tag="RJ318_000361"
     CDS             complement(19989..20957)
                     /locus_tag="RJ318_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7430259.1"
                     /translation="MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQL
                     EIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKFVSPTTAGTMDCAKFGILISLIF
                     FTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
                     YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNL
                     GISYNGILFLGLMIVSIITSLVIVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALC
                     GALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKVYA"
     gene            complement(21043..22032)
                     /locus_tag="RJ318_000362"
     CDS             complement(21043..22032)
                     /locus_tag="RJ318_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HDV7430260.1"
                     /translation="MRKIALFLSLCVFIWASDLQQALEYEKQGDYKKAMEIYKKLALK
                     NSSVLISQEQNNSSQATQTQNSITIKKEEKQDFSRLALANYLGENESFNPLGISSYKM
                     NYFLPFAYSFNSLGVNNNKSEAKFQLSVKKRLFENLLGLDEKYYIAYTQTSWWQIYEH
                     SSPFRETNYQPEFFIDLPLYLKDYEFFNNLRVGILHESNGKGDENLQSRSWNRIYVST
                     AILYNKFLFVPRLWYRIPENKKDDDNPAILHYMGNFDVNLAYLGDDYFINLMLRNNLK
                     FHNNKGAIQVDLGYDIFNNGIYWYLQYFNGYGESLIDYNKHLQRLSTGFLISY"
     gene            complement(22029..22604)
                     /locus_tag="RJ318_000363"
     CDS             complement(22029..22604)
                     /locus_tag="RJ318_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDV7430261.1"
                     /translation="MQLNELNCVILCGGKSSRMGQDKSKLILKNQNLTQFQVDKFSKI
                     FKNVYVSAKEDKFENHFSLIKDSLEFEVYSPMLALYSILSNFKNEFVFVLSVDSPKVG
                     ENELLKMLPFLEQNYKIIIAKTPLHKHPLCGFYHSSLAQTCKNFLEKNEQKIGLLFSE
                     IKTKFVEFEDEDAFLNLNFYEEYEKFKSKLK"
     gene            22666..23973
                     /locus_tag="RJ318_000364"
     CDS             22666..23973
                     /locus_tag="RJ318_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HDV7430262.1"
                     /translation="MKYTELLQLQTFFSRFKKIDFIKRINDNILELSFDRERFIFDLT
                     RAMSAIYTAKFNAKNYNAPFDFMLKKYFSNAFIKEVKVLEGNRILCFSVKANKAYKSY
                     ESKIYFEFTGKNTNVILTDEKDLIIEALRHIDKSYRVVKPNVILESLKPYKMDENFEE
                     IKDFADYFSRKFTSIYESKIKQIKNLKLAQVDKKIQNLQELFSSLDEENSLLLKALEY
                     RKRADVLFANLSVLKDYEREFKLDDFEGKELEFKLEFNPKQSANLYYKNAKKLEQKAK
                     NLNIQRQNLKEKLDFTLSLKELLLQAKSEIELEILLPKKNSKKNQDHKQEDLVANFYF
                     NEFKICVGKNEKGNEFLLKNAKKDDLWLHVRDIPSAHTLIVSNKQKISLDVIEFAARL
                     CVSFSKLKKGSYWVDYTLKNFVKVQQKAFVNYTNFKSINITKD"
     gene            23975..24313
                     /locus_tag="RJ318_000365"
     CDS             23975..24313
                     /locus_tag="RJ318_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430263.1"
                     /translation="MPVSPLGNINYINQNMAYPATQASNELAKEGFAATLNMAEFNEK
                     EKTLNKLEKVNETHEIKEEIKEKAEQEEKKKKHNQEAKTSDDEKNEEDESKDPNFKDA
                     QSIHRLDISI"
     gene            24322..25047
                     /locus_tag="RJ318_000366"
     CDS             24322..25047
                     /locus_tag="RJ318_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDV7430264.1"
                     /translation="MFNTTRIISALVMIGAIIIIALIDQFFINFIVFAVLLYLSFSEA
                     KKLFALENISIIPLAIAFILGSLSHKALLFGILVLLLVVGYLVYKKASLKPALIYIYP
                     SLPILALWQVYLDQGMFALFWLIIIVAACDSGAYFIGKLMGKTPFSPTSPNKTLEGVI
                     GGLICASVIGTILGVFVYSFWLSLLCSFFVAIFAVIGDLLESYFKREAGVKDSGDLIP
                     GHGGVLDRIDAVIIAAFVMVALL"
     gene            25044..26114
                     /locus_tag="RJ318_000367"
     CDS             25044..26114
                     /locus_tag="RJ318_000367"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDV7430265.1"
                     /translation="MILFGSTGSIGVNALKLAALKNIPISALACGDNIALLNEQIARF
                     KPKFVSIKDSKNKHLVKHDRVFIGQEGLEQILTECQDKLLLNAIVGFAGLKSTLKAKE
                     LGKNIALANKESLVVAGSFLKGAKFLPVDSEHAALKFLLEGKKNIAKLYITASGGAFY
                     RYKIKDLNQVSVKDALKHPNWNMGAKITIDSATMANKLFEIIEAYHLYDFKEIDALIE
                     PRSLVHAMCEFKNGASTAYFSKADMKLAISDAIFEKQDTPILEAVDFSKMPALKFHPI
                     STKKYPIFKLKNTFLKEPNLGVIINAANEVGVYNFLENKSGFLDIAKCIFKALDHFGV
                     PKISSIEEVFEYDFKTREYLRS"
     gene            26116..27510
                     /locus_tag="RJ318_000368"
     CDS             26116..27510
                     /locus_tag="RJ318_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deacylase"
                     /protein_id="HDV7430266.1"
                     /translation="MKFFLTILFFITSIFALELDFSVGENGKSLDDNNTVLIFGGIQG
                     DEPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIKRSRGNNGDLNRKFASISPKDPD
                     YKTVQRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASK
                     YPDLENIATQTVNSVNSSLADPKHAYHLKNTKTQELGDTEMLKALTYFVISNHKAAFA
                     NEASKNLPVNLRAYYHLLAIENYLKTAGIEFSRDFELTPQGVDKAINKELEVKLFDDR
                     ILLSLKNPRKVINYVPFPVNKELNYNTSNELTAVIAEGNSFYIQYGNRFQTRLYPEYL
                     EFSDAFNEVTFQVDGNETTVPFGTKVKVKENFLIPKIANVRVNIIGFDHSKDESGILV
                     HKKNMQTQYSLDMAGKIYRAEFYELRGANLQQLLEANINSKLIKNAKNLDLNTLKMAR
                     SKDKFLGSILVEFE"
     gene            27507..>28262
                     /gene="tsaD"
                     /locus_tag="RJ318_000369"
     CDS             27507..>28262
                     /gene="tsaD"
                     /locus_tag="RJ318_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDV7430267.1"
                     /translation="MKNLILAIESSCDDSSIAIIDKNTLECKFHKKISQELDHSIYGG
                     VVPELAARLHSEALPKMLKQCKEHFKNLCAIAVTNEPGLSVSLLSGISMAKTLASALN
                     LPLIPINHLKGHIYSLFLEEKISLDMGILLVSGGHTMVLYLKDDASLELLASTNDDSF
                     GESFDKVAKMMNLGYPGGVIIENLAKNAKLKNISFNTPLKHSKELAFSFSGLKNAVRL
                     EILKHENLNEDTKAEIAYAFENTACDHIMDKLEK"
BASE COUNT         9980 a         3890 c         4781 g         9611 t
ORIGIN      
        1 taaataaaga attagaaatt tttaaaaaaa atcttagttc ctatacccaa agttgtagaa
       61 aattttttct taagcaaggg gcgtttagct tatatcattc taaaaatatg gataatttca
      121 taaaaaaagc ttatgatata gttcttaaag attattttga tgatttttca cctccaagtg
      181 ataatatccc tttttgtgtt ttagcaagca aagcatatgc aaataatagt ctttgtttta
      241 atgaaagtat ttctttgatt tttgtttata aagatattaa ggcttttcat ttaaaaccta
      301 tgattaaggc ttttatcgaa attttaaatg atgcgcattt gcaaattgat tcggttatct
      361 tagaatttaa tggactttat aatgctagca atgagcttaa gacttctata atacaaactc
      421 gtttcatatg tggttctagg attttattta aagggattaa gataaaattt gagagtatta
      481 taaaagaaaa taaaaatgat tttgccaagc ttttgctaga aaattttaaa gaatttgaca
      541 ttccatttat aaagcaagaa tttaatatct taaaagattt tggcggatta aatcatttaa
      601 gatccttgga gagtttgctt gttcttttta agacttctcc aaaaaattat gctttaaatt
      661 ttatagatga aaaaaaatta agcgagttgc gtttagctgg agatttttta ctttctttaa
      721 aatcagcgat gaatttatta agtgctaaag atgaggatga atttttactt attaatgttc
      781 atgatttgag tgaattaatg tataaaaaag ctaaaaaaca ttttggagca aatgagttgt
      841 tggttcaaaa ggctttgcaa agtatgcata ctataggttt ttatacacac tttttagcaa
      901 agcaaattca agatggatta aatcatactc ttaaacaaga atataaattt aaaactcttg
      961 tggaagtttt agaatactta ttaaaacttg aagataaaca tgttattttc gatcttaact
     1021 tggtttttgc cctaggaaga ttgaaatacg gtaaaaaaga tatagaaaaa gctttaatac
     1081 tttttgagaa aattttttat aaaaggcata gtttttgtgt tttaaaactt ttgcttgata
     1141 gtggaatttt aaaagattta tgtaagcctt tttggacagt tcgtttttta agcgatgaag
     1201 aaggaaatta tagttttgat gagcaagttt ttcttatgtt aagtgaattt gaaaaatacg
     1261 aagatgagct tgagatactc caaaaactta aaaccgatga aaaaatgatt ttaaagcttg
     1321 tgatactttt aagcgctata gaaagtgaaa atgaaatttc tttagcaggc atatatagag
     1381 cgtattgctc caaatttgat ttaaagaatg aaattttaga atggggtctt aagatattta
     1441 aaaacaataa tgccttaaaa gatcttgtag aaaaagaaga tatatacaat cctattgttg
     1501 taagtagctt ggtttctaag ctagaaaatt tagaaaattt agagctttta tacactttaa
     1561 cttggctaaa ggctaaggct ttaaattata atgcttttta ttttagagtt cttgataaac
     1621 ttttagaaaa tgcaaaacaa ggttttgaag atgaaaatct acttgaagaa agcgcaagaa
     1681 gagtaaaaaa agaattaaca cttaaaagaa gtaagatttt tttagagcaa gatgaaattt
     1741 tgcaagataa aatcatacat atcaaatcaa atctttttat tataaaaaat acttttgaag
     1801 atattgttat gatttctaaa ttagccaaag aaaatgattt taaattttgg tttagcaatg
     1861 aaacaaatct tagtttgcaa attgttgcac cacttcattt taatattgcc attattttaa
     1921 gttctttaac aaatttaaat cttattttca tgaatttttt tgaacttttt gatgataaaa
     1981 tttatttaag atttgaatat gataatatta tcagtgatga gcaaaaacta aaactttgcg
     2041 agcttttaaa ttcaaatctt tctggtttta atttgaaaaa aattaaaaag ccaatcatta
     2101 aaaaagatga gttaaaatta gacttaaatt attctaaaat gtatgccaaa ttaggtctta
     2161 atactaaaga tcagcagggt ttaatggcgt atttgatgaa tgtttttaat gaacttgaac
     2221 ttgttttatg tgcagcaaaa attcaaacca taagacaaag gacgcgtaat atttttattt
     2281 ttcaaaagaa tgaaaaatta gaacatagcg agcaaaagtt agttaattta ttaataagtg
     2341 agtaaaaaaa tgtgtggaat cgtaggctat ataggaaata atgaaaaaaa acaaattata
     2401 ctaaatggac ttaaagaatt agaatatcgt ggctatgata gtgcgggtat ggcagtgatg
     2461 caagaaggag agcttagttt ttttaaagct gtaggaaaac ttgaaaattt ggcgaataaa
     2521 tgcacggatt ttgaaagtca aggttatggt tttgctatag gtcatacaag atgggcaact
     2581 catggtaagc ctactgaaat caacgcacat cctcatttag gacagtattc ttgtgtgatt
     2641 cacaatggta ttatagaaaa ttataaagaa atcaaagata aacttgaaaa agaaggcgtg
     2701 agttttttaa gtcaaaccga tacagaagtt attgtccagc tttttgaatt ttatgcaaga
     2761 aatttgggag tttttgaagc ttggcaaaaa accatcaaag aacttcgcgg tgcttttgct
     2821 actttgttgg taacaaaaaa agatcccaat catgtgtatt ttgcaaaaaa tgctgctcct
     2881 ttgattatag gtaaaaatgc aaataaagaa tggtattttt cttcaggtga tgcgcctttg
     2941 ataggaagtt gtgatgaggt aatgtatctt gaagatttaa gcttgggata cgcgagtaaa
     3001 gatgagcttg tcgtttatga aaatgatatt ttaaaatcac tttgtttttc taagctttca
     3061 ggcgataagg cttatgcaaa aaaagacggc tttcgttttt ttatggaaaa agaaatttat
     3121 gaacaaagtc gcgtgatgag tgaagtttta atggggcgta ttcaaggcga tgaagtcgtt
     3181 tttgatgagc taaacaatga agatttaagt caagtagatg aaatcacgct ttgtgcttgt
     3241 ggaacaagct atcatgctgc aatggcaagt gcttatttgt ttgaaagaat tgctaaagtt
     3301 aaagctaaag tagaaattgc aagtgaattt cgataccgtg aagcaattat aaaaaaagat
     3361 tctttattta tcgttatttc tcaaagtgga gaaacagcag acactttaga ggctttaaag
     3421 attgcaaaag agcagggtgc taagactttt gcaatttgca atgtggataa ttctaatata
     3481 gtgcgtttag cacatctaag tcttttaact cgtgcgggca tagaaaaagg agttgcttca
     3541 actaaagctt ttgctactca ggttttaaca ctttggatgc ttgctatttt tatggcacaa
     3601 aaaagaaatt taaatgtttc tgctgaaatt aaagcacttt tgcatactcc aaattgcgtg
     3661 agtgtaaaac aggctttaca tgaaaaaatt catcgtttat ccaagcgtta tttagatgga
     3721 catggctttt tctttatagg cagagatgtg ttttatcctt tggctttaga aggagctttg
     3781 aaacttaaag aattatctta tcttcacgct gagggttatc ctgcaggaga gatgaaacat
     3841 ggccctattg ctttggctga ttctaagctt tatactatag ctttaatgcc aaagcacatg
     3901 ctttatgaaa aaacaaaatc aaatgttgaa gagcttattg ctagggattc tacagtgctt
     3961 agcatttcac ctttagaatt tgatttaagt gatgatttta taaaaaccaa tgagcaagat
     4021 cattatatgt gtgaattttt tgaaatgatg gtcattactc aacttttggc gatggaaatt
     4081 tccataagac ttggcaatga tgtggatatg ccaagaaatt tggctaaaag cgtaacggta
     4141 gaatagaaat gaaaaaattt ttttgtttaa ctttagtttg taaacttttt gctttaagcg
     4201 aatttgaact tcatcatatt gataaagtac ataagctagg gtatagcgga gatactatta
     4261 taataggtgt agccgatgat gcttttaatc aagatcatat tagtttaaag gataagattt
     4321 taaagtctac ttatcctact gatacagctg ggaaacagct tatacctgat ttgaaaaaat
     4381 caacacacgg aagtcatgta gcaggtatag ctgttggagc aaagataggc gatagcaaac
     4441 cttatggagt ggcttatggg gcaaaatttt atggagctgg ggtgtttcca aatggctctt
     4501 acactcaaat tcctgatatt tataattttt tcaaagatgt gagtattatt aataatagct
     4561 ggggtattaa tttttatcct tattttaatc ttaaggcttc aaattctgga ttagtagatt
     4621 gtactcaaac taatcaaggg acaagctata atatctgtaa tactcctttg gaatatgtta
     4681 tgaaagcaga taaggttgct aatgatatga tgaggcttag caaggacaag ggagtattaa
     4741 atgtatttgc tgctggtaat gaaggaattc ttagccctgc tttgcatgcg attttaccaa
     4801 gttatgatga atctttaaga gcttggttgg ctgttggagc tttggatgca aatgagatta
     4861 ctttagaatc agatgggact ttaataatta aaagtcaagg tttggctgat tttagtaatg
     4921 gttttaaggg agctacgaat ttttctttag ttgctgctgg agtaaatatt aataatgttg
     4981 attcaagcac taatgataag tttacaaaaa aaagtggaac ttctatggca gcacctatgg
     5041 taagtggaac agcggcactg gtcaagcaaa atttcccctt tttggatggt aagcaaattg
     5101 ctgatatact attaagtaca gcaaataaaa attataaggc tccaaaattt actgttaaac
     5161 aagtaaccga tggaacaaat caacctaaat ttcttattgt gtatatttcg caagatccac
     5221 ctgggataga agatgaaata aaacgggatt taaaacagct ttacaatgga atacaagttc
     5281 aagttaatgg acaatggatt gattatagtg attatatttg ggataataga gatagtgcgc
     5341 agtcacaaaa acttaatact tccactatta gttctattaa tggagtagtt agagttgaga
     5401 aagaagaatt atttggacaa ggaattttag atgcacaaaa ggcgttaaaa ggactgagta
     5461 ttttagatgc aaacagactc agtgatcagg atgtattaaa atatgagcaa gaacctaata
     5521 cagcttatta tactataaac actgcaggtt atgatgctga attttctaat gatattagtc
     5581 aaagaaaatg ggatgaaagt actcatttat caagtgctat taataaacct acacatttag
     5641 ctaatcttaa catagggtta tctaaagaag gtgaaggtat tttgattatc agtggtcaaa
     5701 atacttatga gggcgcaact ttaatcaaac aaggagaatt aaagcttaaa ggaaaagtta
     5761 aaaataatgc ttatgtagaa caaaaagcaa tattaagcgg taatggtatt gtagggcaaa
     5821 atttaaacaa taaaggcata gttagacctg gaaatgaaga tttgaatgat ttaaccgtgc
     5881 aaggaactta tactcaagaa ggagttgatt ctaaattgca acttgatttt ggtaattata
     5941 aaaattctaa actgattgca aaaacttatg atattaagag cgggaattta gaatatattc
     6001 ctttacctaa atactatatc ttaaataagc cagtgaaaat taatttggga gatttggaaa
     6061 aaagtttatc atcttttaat catgttttga tacaaaatac ctatgcttta aattttgatt
     6121 ttgttttaag tgatgattta gtgagtatta ataaaacctt aataaaacct aatttaaagc
     6181 caaatgctta cgaaattcct aatacaagct tgggaaatgc tttaagacaa ttgcgatcta
     6241 gggcagactt gagtcagact tatcaggaat tttttgcttc tttagataat ggaatagatg
     6301 taaagactaa attaaataga atagaaggtt cagggtattt aagcactttt agtaatcata
     6361 atcaatctaa tttaatgcaa aataatatgt tatttaccct tcatcctctt aatattaata
     6421 attttgcaca aaacaataat atcttacttg ctagtactta tttacctaga atttttagca
     6481 atgaagaata tttttggcat cttactccaa gttataaata ctataaagat aaagattttt
     6541 caggtcaaaa aacaggtgct aatatctctt taggagaaaa tttctcatca ggctttttag
     6601 cttatgcttt atctctttct agcgctaaat ttaattttaa taatggtagt gatttgaaga
     6661 gttataacat ggatttattg cttaattata accatgattt agattttata aaaatattaa
     6721 gtggattagg tataggtgta ggatttaata ctcttaatcg ttttgtagta gagcagccaa
     6781 ttgaaggcaa atataaaaca ttgcaaactt cagcccagct tggtgtaact aaagatatta
     6841 ttttaggtca agattttatt tttaatcctt taatgtattt tacacatagt tttttttatc
     6901 aagaagattt taaagaaaat aaaagtcctt ttgctaaaaa ttatgaaagt ttaaaacatc
     6961 atagcataaa tgcaaattta ggttttaatc ttgctaaaaa tatagagcaa gatgattatc
     7021 aagcttcttt ttctactttt gtaatttttg aaaaaagaat ttatggaaga actttagaaa
     7081 ataaggctag ttttgttgat tttcctattg cttttattca aaaatataaa ttaaaagata
     7141 atattttaag tcaaggtttt aattcagaat ttttatataa aaacaatgta ttttggcagt
     7201 ttatgttaat gaatagattt tctcataatg cctatgaatt gcatttaatg agttcagtag
     7261 gaaaacgttt ttgaaagtat ttattttttt agcttataat aaataaaatt ttaatcaaag
     7321 gaaaaaatta tggaatacag agttgaacat gataccatgg gtgaagttaa ggttccaaat
     7381 gacaaatatt ggggagctca aactgaaaga agttttgaaa atttcaaaat cggttgtgag
     7441 aaaatgccaa aggttttaat ctatgctttt gcaaatctta aaaaatcttt agctttggtc
     7501 aataacaaac ttggcaaact tgatgatgct aagaaaaatg ctatagttca agcttgcgat
     7561 gagattatcg caggtaaatt tgatgataat tttccacttg cgatttggca aacaggttca
     7621 ggcacacaaa gcaatatgaa tatgaatgaa gttattgcaa atcgtgccac tgaaatcatg
     7681 ggcggggatt ttcgcaaaga aaagcttgta catccaaatg atcatgttaa tatgagtcaa
     7741 agttcaaatg atacttttcc aacagctatg agtatcgttg cggttgagca agtagagaaa
     7801 aagcttatcc ctgcgcttga tgagcttatt gcaacttttg aaaaaaaagt aaaagaattt
     7861 gatggtatta tcaagatagg acgcacgcat ttacaagatg ctactccact tactctagcg
     7921 caagaattta gtggatatct ttctatgctt ttacattcaa aagagcaaat catcgcttct
     7981 ttaccaactt taagagaact tgccatagga ggaaccgcag tgggaacagg gcttaatgca
     8041 catccagaat taagccaaaa agtaagtgaa gagctaactc aacttatagg tacaaaattt
     8101 atttcaagtc caaataaatt tcatgcttta acaagtcatg atgcgattaa ttttactcat
     8161 ggagctatga aaggtttggc tgcaaattta atgaaaattg caaatgatat aagatggtta
     8221 gcttcaggcc caagatgcgg tcttggtgag cttatcatcc ctgaaaatga gccaggaagt
     8281 tcgattatgc caggtaaggt aaatcctacc cagtgtgaag ctgttactat ggttgctgta
     8341 caagtgatgg gaaatgatgt agctatcgga tttgcagcaa gtcaaggaaa ttttgaactt
     8401 aatgtgttta agcctgtgat tatttataat ttcttgcaaa gtcttgattt gttggctgat
     8461 tctatgcatt cattcaatat ccattgtgct gtaggcatag aaccaaatcg tgcaaaaatc
     8521 gatcataatc ttcataattc tttaatgcta gttaccgctc taaatccaca cataggttat
     8581 gaaaacgctg ctaaagtagc caaaaatgcc cataaaaaag gtatttcttt aaaagaaagc
     8641 acaatggagc ttggtttggt tagcgaagaa gatttcaata aatttgttga tcctactaaa
     8701 atgataggcc caaaagccta gaacatcaaa cttgcctttt ttaaggcaag ttaaattaaa
     8761 ttcttatctt ttaaaatcac atacattctt aaagttgata caaaaaaggt taaaatcgca
     8821 ggacctaata taatacccca aaaaccaaag gtagaaattc ctgctatcat agccaagaaa
     8881 attaaaagtt cattgatttt agtaggggtt tttacaagtt ttttgttgat ccatttgatg
     8941 attaaaggtt tgattaaagt atctgctata aaagaaatta caattacaga ataaataaaa
     9001 ataacaagag ctgagttaag attgtttgag gcaaattcat aaagacttac aggcatataa
     9061 attaaagcac ctcctatagc aggtatgaga gaacttacag caaaaattac tcccattaaa
     9121 attccatcat aaccataaaa tattgtgatt aaaccaaaaa gcgcaccttg aaatatcgct
     9181 acaatcacca tagagtaaag tacaacagcc ataacattac ccacctcgct taaaacatca
     9241 tcaagttctt ttttatcaat aggaatgatg gatttaagat agataacaag ttctgttcca
     9301 tatagatttg caaagaaata aaatacgcaa attaaaacca tatctataag aaatttagct
     9361 cctgattttg taaaacttga agcataactt agaatttgtt tagaaatact atttaaatct
     9421 atagatgcta aaaattcttt gattttaggt tctaaaaaat taaagctttc aggcaaggta
     9481 aattgataat ttttgacata atcaagagtt tgtgtgacta aattaatatc aaaatttttt
     9541 aaagctttgg caagttctat catagcataa acaaaaggtg caaagaaaag caaaaccata
     9601 caagttgttg taagaatgga agctaaaaat ttatgccctt tagtaagatt taaaaatttc
     9661 gcattgatat ttgaggtagc taccgccatt aaactagcta tgataattac aagtaaaaaa
     9721 cctttaaaaa ggtaaagcaa aagaaataaa atgactaaaa taaagcttat aagaaagaat
     9781 tttccatttt gcaaaattta ctcctcaaat aaagtttttt catagtttag ttttaaagca
     9841 ctataacttt ttgcacttgc tatacgccct tttgcagtgc gttctatata gccattagct
     9901 aataaataag gctcgattac atcttctatg gtattttcat cttcacttaa agccgcagca
     9961 atacttgcaa gcccgatagg tttttgctta gcagcggtta aaagttcaag atatcttaaa
    10021 tccatcgcat caaaaccaag ctcattaacc cctaaagaat ttaaggcctc attagccctt
    10081 ttttctgtga taatctcttc atcattaaca tcggcaaaat ctctaactct ttttaaaagc
    10141 cttagagcta ttctaggggt tgaacgactt cttttagcga tctcaagtgc ggctttttct
    10201 tcgcaagttt tattaagttt taaagctgct ttttgcaaga tgagggcaag ttcgctatct
    10261 ttgtaaaatt ctaatctaaa ttgcatacca aaacgatcac gcaaaggatt gctaagcata
    10321 cctgcacgcg ttgtagcccc tataagagta aattttggta aatcgatttt tatggtttga
    10381 gcagctggac cactacctat gataatatca aggcggtaat cctccattgc agggtaaagc
    10441 acttcttcga tagcaggact taagcgatga atttcatcga taaaaagtat atccccttcg
    10501 ctaagattgg ttaaaatagc ggctaaatct ccgctttttt ctatcatagg agcggcggtt
    10561 gttttgatat ttgcactcat ttcataggag atgatattag ctagtgttgt ttttccaagt
    10621 cctgcaggac cactaaaaag tatatgatct aaacattcat tgcgtttttt ggctgcagct
    10681 ataaagacat ttaaattttt tttaatgctt tcttgaccta tataaccatc aaaatttgaa
    10741 ggacgcaacg aagtttcgta agtttcatca aaggagtatt tttctatttc tactattcta
    10801 tccatatctt tgcttatatt ttggaaaaat taaaataaga ttttagctaa aatttgctag
    10861 aatttacatt aaactttaat gattatggtt taaaaatggg aattttaaca aaattagaat
    10921 tagattatga aattgacgat atagaaaaat ttttacaatt ttttagaacc atgtgcgata
    10981 ggtttgaacc tttaatcatc aagcttggaa gcgatagtgt gcgttataaa gaagccataa
    11041 aagagcttga aactttagca cacaataccg cttgggcagc aagacgctta aatcttgaag
    11101 aagtgactga tttttgtgta ttttgtgaag agatgatggc gcaagcaaat cgctttaatg
    11161 ggcctgctag tgatgaattt acggattgga tgcttttgat gagtgatcag tttgaaaaat
    11221 attgtcgttc atatgaaaat gatgattctg ttttagcggt ttttaatcct ttaattgtta
    11281 atgttccaaa tattatttct aaataaggga gtgacttggc ttcgacagga gtaagtctgc
    11341 ttagatggca tgtcgctttg ggcaaagcgt aaaaagccca aataaaatta aacgcaaaca
    11401 acgttaaatt cgctcctgct tacgctaaag ctgcgtaagt tcagttgagc ctgaaattta
    11461 agtcatacta tctagcttaa ttttcggtca tttttgatag tgtagccttg cgtttgacaa
    11521 gcgttgaggt gaaataaagt cttagccttg cttttgagtt ttggaagatg agcgaagtag
    11581 ggtgaagtag tcatctttgc taagcatgta gaggtctttg tgggattatt tttggacagg
    11641 ggttcgattc ccctcgcttc caccagtttt aaatcaatgt ttattgaaat ttgaagatta
    11701 ataaaaattc atagtttaaa gtttttaagg tgtaaaaccc taaaaacttt tagttttcct
    11761 taaaaagttt ggaagctaag tgcgttgcac gactttgatc tgtatctttt ttaagtgttt
    11821 tataaatttt acttacatat tcttctaagg tttgttgaga atctatgatt ttttcagaag
    11881 aaggaatttt ttcatactct ccattgtttt taagctcata agctaaaaca ttatcactaa
    11941 gttgcaagcg taaaaattga gctaatttag ctttacttct ttcatcatat ataggagtca
    12001 taagttctaa gcgacgctct aaatttcttg gcatccaatc tgcactcgat ataaaataat
    12061 ttggctcact atgtttaaaa taaaatactc tagcatgttc taagtatttt cctatgatgc
    12121 ttctaacgcg tatgtttttg ctgtattctt catcaggttt taagcaacaa attccgcgta
    12181 tgataagatc gatttgcact ccttccatac ttgcttcata aagcgcttgt atgatatcac
    12241 tatctacaag agaattcatt ttagctacaa tcacaccttc atttttcttg cttgtttcaa
    12301 tgcgtatcat ttctaaaact ttttctttga tttgatttgg gctcattgaa agagtttgaa
    12361 ggcgacgatt tttgctaaag cccgataaga tgtgaaaaaa gcttgtcgta tctcttgcaa
    12421 attctgcttt gcttgtaaaa taactcacat cagtatagat tttagcactg cttgcattat
    12481 aatttcccgt acttaaatgc atataaaatt taagtttatc tccttgtttg cgtatgactt
    12541 gagaaacctt agcgtggact ttaaaacctg taatgccata aataacatga gctccggcat
    12601 tttctaaagc ttttgcccaa tgaagattgt tttcttcatc aaagcgtgct tttaattcta
    12661 ccatcacagt tacttgtttt ccatcgcttg cagcatcaat taaagcttga actatattgg
    12721 aatttttttc aactctataa agtgtcattc ttatggaaat tacttcagga tctttgcttg
    12781 cttctttgat aaatttataa actggatcaa aactttcaaa aggttgtata atgagtatat
    12841 cttctttttc tacagcatca aaaatagata aattctcatc aaaaggtggt aaagttttag
    12901 gcgtgtaaag tgggcttaaa agatgcgtaa aggttttatt tcctgcgatt tgccaaaggc
    12961 tagggagatt gagtaaaata gaatattcat aaacatcttt atgaaaaatt ttcatgtgag
    13021 tattaagaaa ttctacgatt tgctcatctg catctttttg aatttgcaat cttacaaaag
    13081 ctccttttct gcgaagcttc aagccttgtt ctaaaatcat cataaaatca tcagcttctt
    13141 cctcttctat taccatatct gcatttctag tcactctaaa tgctgctgaa gctaagagtt
    13201 tatagcctgg aaaaatttct tctgcgtgtt gatggactat actttctata ggaacataaa
    13261 tatttgcact tacttcataa aaacgaggta aaactcttgg aattctaatc attccaaatt
    13321 ttacaagttc aggatgcgct ttatcgcaaa ttttaaccgc tagtgaaaaa gataagttgt
    13381 ttaaatgcgg aaaagggtga gtagcatcaa cagctattgg aacaataaca ggaaaaatat
    13441 tagagaaaaa atactcatca catttttgtt ttaaattttc atctaaattc tcataatgtt
    13501 ttatgaaaag attttctttt tctaattcac ttgtgatttc attaaaataa cgctccaaaa
    13561 gttctttttc ttggtgtaaa tatttgcgta tggcttttaa ttgttgtaac ggggtcattt
    13621 catcgctact gcttgcatta actccagctg aaaaaagttg ttttaagcct gcgacgcgta
    13681 tcatataaaa ttcatctaaa ttagtgcaat atatagctat aaattttaat ttttctaaca
    13741 agggtaaatt tttagaacat tggtctaaaa cacgagaatt aaagcgaagc caagaaagtt
    13801 cgcgattgat aaacatatca ggacttgttt gcattaattt ttcctttttt agttgtattt
    13861 tatcatttat tttgaaatta ttgaataaaa gttttaaatt tttttaggtt aattaagagt
    13921 aaatatatct ttaaaattat attaaattca tctatgttag aatcacaaaa tttatttctg
    13981 ggaaattctg tgacattgtt gtttcattga agattttaag aaatgataat tttaaggagg
    14041 aaaattttga agaaaacttc gaatcttttt actatttttc ttgttttgct ttttgttttc
    14101 tttgcggttg ggttttatac tttttataac gctaagggca catcttattt aagcaatgca
    14161 agtgaatctt gtaataactg ccatattatg aatgaagttt ataacgaata catggcagga
    14221 ccacactctc aaaaagtcaa aggcgaacca agagcaactt gtgtggattg tcatttgcca
    14281 cataattttg tagctaagtg gatagctaaa gcgcaaagtg gtttaggaca tgcttatgct
    14341 tttactttta aacttgatga gttgcctaca aatttgagtg cgactgaaaa aagcagaaaa
    14401 atggtgcaag aaaactgcat acgctgtcat gcagattttg ctcaaacagc tatcaatgct
    14461 acaacaaatc cacatgcaga caagtcatta aattgtgctt cttgtcataa agatgttgga
    14521 cataaacacg gaatttaata aggagaagat gaatgaaaaa aaatatttta cgcttaggta
    14581 ttgtcgtttt ggttttactt atagcgggag ttttatggct aaataatgat atcaatcaaa
    14641 aaaaagaaga tgaagcaaat aaaaatgcca ttgcagcaaa tgctgatttt tctttgctta
    14701 gcgatgatga tccaaatttt gaaaaatggg gtaaggtttt tccagagcaa ctaaaaatgt
    14761 atttaacggt tgaaaaagaa gagcctaagg ctactgaatt tggtggtaat ttagcttatt
    14821 caaaattaat tcgctttcct caattaacca tactttgggc aggatatcct tttagtcttg
    14881 atttcaatga agaaagaggg catttttggg ttcaagtaga tcaaatgaaa acagcaagaa
    14941 acaacaaaga ttttcttaat gcccatggac ttgctgcttt taaaggtcaa cctgcagctt
    15001 gtatgaattg tcatagtgga tggactccat ggcttataaa aaatgttgct aaaggagatt
    15061 ttactgcttt taactctaca aattattgga ctatgattaa aaatatccca gctgttgatg
    15121 gtatagtaga aaattcacct gaacatgcag gcccacatgg tggtaaaaga atgggtgtaa
    15181 cttgtgcaga ttgtcacaat ccaaatgata tgagtttaag acttactcgt ccagcagcta
    15241 ttaatgcttt agtttctaga ggatatgaaa aagatccagt acaaggcgta aaagctacaa
    15301 gagaagaaat gagaacttta gtttgctctc aatgtcatgt tgaatactat tttaaaccaa
    15361 caggggaaaa agtaaaagta atgggtgaaa ctattgtaga tgatagttct aaaaaatggt
    15421 ggaatggaac tcagaaaaat tatgatgagt atgagttttg gagagatggc aataaagtta
    15481 aagagattga aaccgatggt atagttttaa cttttccttg gagtgagtgg aaaaaaggac
    15541 aaccatttag aattgaaatg ctagatgatt attatgataa agttcgtgga gtatttggag
    15601 ctgattttac tcataaatta acaggagcgc aaattattaa aattcaacat ccagaaagtg
    15661 aactttatag tggcggtgtg catgctgcaa atggagtaag ttgcgtggat tgtcatatgc
    15721 cttatgttag agaaggagct aaaaaggtta ctcaacacaa tatcacttct cctttaagag
    15781 atattaactc tgcttgtaag tcttgtcata aacaaagtga agattattta aaagctcaag
    15841 tgcttgacat acaaaacagc gttgcacatg atcaaagaac tgcagagtat gcaattgtta
    15901 gtttgattat ggatactaaa aaattacgcg atgaactagg caatatggaa aaattccaaa
    15961 gcgatggaaa agctgatgcg aaaaaaatta gcgaagagct aaaagaagtt ttagaacttc
    16021 atcgtaaagc tcaaatgaga gcggattttg ttaatgctga aaactcaact ggtttccata
    16081 atcctcgcga agcttcaaga atgttattgc aagctgttga tatggcaaga atgggacaaa
    16141 ctaaacttgt agaaattgca gcggcaaatg gaattaaaga ttttaaaact tcaaatttag
    16201 gttttgaaga tattcaaaaa tttaatccag gagagcttta ttataaagta gatgttaata
    16261 atcataaagc tggagagcgt tactatgcag atgaaaaaga tgttaatggc aatcctccaa
    16321 aagaactttt agagcatgat aaagagcttg ctccttataa ttatcaagtg attgataaaa
    16381 aataattctt aagccctata atcatagggc tttttctttt ctttgtttta aaaaatataa
    16441 actttttatt taaaattcac ttttgtttca ctttgttttg tcaaaatatc acaaattttg
    16501 ataatcaaaa aggagttaaa atgatcaata aaaataaatt gtttagacag gttcatatct
    16561 atcttagttt gttctttttg ccttgtgctt tgctttttgc tttaacgggt atagcgtata
    16621 tttttggtat taatcaagat gtgggcttaa aagttgagca gtatcaattg tcaaaagtta
    16681 tagaaagtgg taaagaaaga gaagctttaa tagagtattt aaaaacaaat ggtttaaaag
    16741 taccatctaa tacaaatata attaaaagta aagataaagg tataacaata ggtggaactc
    16801 attatagtgc taatataact caaaattcta ctaatgaata caatattacc ttaaaaacaa
    16861 gatctttact tggagatatg attatgcttc ataaagataa gggtgcttgg tatttttctg
    16921 tgcttagcgt aggttttggt attactttat ttatgcttta tatttcaggg cttatgatta
    16981 ctttgtttgc aaataaaaaa gatagaagta aacaatttgc agttcttgga gtaggggttg
    17041 ttgtaacttt gcttttggct tatcttagcc tttgattttt cctagctttt taagctaggt
    17101 attatttatt tttttgtata atcatacttt actttattgg acagatgggt gagtggctga
    17161 aaccacaccc ctgctaaggg tgcagatctt aacgggtctc gagggttcaa atccctctct
    17221 gtccgccact aaaactttct tgaaaatccc aagtatttta ttaagtatcg aagcaagaga
    17281 ctagcccttg cgaagttata ttattttaca gcgtttttga tttctaaaat catagttttt
    17341 aaagactcta gtccatttcc acttgctaaa taccagtatt ctggatcaag atagatgatt
    17401 tttttgtttt gcgctgcttt ggttttagcg acaagtgcat tatcgagtat gccttgagca
    17461 cgttctttgt tgcctaagat gacatttcta tcaacaacaa aaatataatc aggatttttt
    17521 tctaatataa attcagaatt gatacttttt ccgtgtgtgc ctacttttat attctcatct
    17581 accgcgttaa tccctaaaac atcgtgaata atcccaaagc gagattgagg accaaaggct
    17641 gaaattttgt tagaatttgt aagaatgata agagcttttt tatcttcatc aactatactt
    17701 ttggcttttt caatttcatt tttaatatct gaaatttttt ctaaagcttc tttttctaaa
    17761 ccataaagtt ttgcaacgct taagacattg ttttcaaaag agcttaaaaa atttgcatta
    17821 tcaagaccta caaataaagt tggagctatt tcttttaatt tgtcataaaa tttactttgg
    17881 cgtccagaaa tgatgataag atcaggtttt aaagcattaa tggcttcaaa atcaacttgt
    17941 tgtactccac ctacactagg tttgttttta aattgttgta ggtattttgg taaattttta
    18001 gcaggaacgc caacgacttt atcatttaat tttaaagcat caaaagtatc taaaattcca
    18061 agatctaaga tcactacctt agaaggattt ttagggattt tattttctcc tagactatcc
    18121 ttcactaaaa aactatcacc ctcatcgctc atactaatag gcaaaacttt caccgtagca
    18181 gtgttggttt ttgttgtaga acttgcgttg ttttcatttg agtttgaatt acaagctgtt
    18241 aagattagac ttaaaaaaaa tgcaaaaaat gcaaaaacta aagatttttt catattttct
    18301 cctttttaaa aataaataca aattttctta ccattaattt gacttacggg tatatccata
    18361 tcataaattt gttttaaatt ttcttgattg atgatttcat cttttgagcc ttgttttaaa
    18421 agctttccat cttttaaggc tatgatttca tcagaataaa tcgaagcaaa attaatatca
    18481 tgtaatacaa cagctatact tttgttaaag tctttgacta aatttttcat tagttgcatg
    18541 atttgtacgc tatgcttcat atcaagattg ttcaaaggtt catcaaacat tataaattca
    18601 gtatcctgag cgatgatcat ggctataaaa gctctttgct tttgtccccc gcttaatgta
    18661 tctaaaaatt catttcttaa gttgctaagt tccatgtatt ctaaagcttc attgattttg
    18721 attttatcgt ttgtattaag tcttccttga gaatgcggaa aacgcccaaa agcgactaat
    18781 tcttcaactt ttaatcttaa attgatattg ttttgttgtt tgagaatgga aattttttgt
    18841 gctaagattt gctctttata attttttaaa ttcattccat cgatataaat ttctccacta
    18901 ctaggtttta tcaaacgact tgctagagct aaaagagtgg attttccagc gccattggct
    18961 cctattatag aagtgatttt gcctttatga aaatcaaggc taagatctga aataatgact
    19021 ttattatcat aaaatttggt gatatttttt agtttaatca taatttatta ccctttaata
    19081 caagatagat aaaatatatc ccacctaaga aattaataac cacgcttata gtggcattat
    19141 aatcaaaaac tctagagaca aaaaacaccc ctccaagcaa agccaaaata ctaataagta
    19201 tacaagcgct tagcaaaata ctatgctttg cagttttaaa tagctcataa gtgatattta
    19261 ctactaaaag tcctaaaaag gttataggac ctacaagtgc ggtgctaata gaagttaaaa
    19321 tagctatgat aatcatcaat tgttttgaaa ttttttgata atttatccct aaatttatcg
    19381 ctaaatcttt gcctaaattt aaaggatcta aaaatttcat atagcgaaaa atccatataa
    19441 aacttaaaaa gctaataata taagcaagaa ttaaaacatc aaaagcaata ttatcaaaac
    19501 tagcaaacat tcttccttgt attaccatga attcatcagg gtcgattagt acttcaaaaa
    19561 aagagcttaa agtgctaaaa agtgttccaa aaactaaacc taaaagcatg ataagataaa
    19621 tacttctatc actactaaat aaaatcttat aaagtcctag tgaaaaaacc accatacaaa
    19681 ctagagtgat taaaaaattg atatcgtttt tataaacact taaattagcc gcaccaaaag
    19741 aaaagataag agcactttga agcaacatat ataaagaatc taatcctatg atagcagggg
    19801 ttagaatttt gttattgcat aaagtttgaa aaatcactgt tgaaacagcg atacaaatag
    19861 ctactataat aatagccgca atttgtaaaa aacgactttt taaggcatac tcatcaaagc
    19921 catttaaacc cacaaatata aaaatcccta tcatgttaag tgttaaaaag cttaaaatta
    19981 gcattttttt acgcataaac tttccttttt agtaaaagaa agataaagat taaagaccct
    20041 aaaacacctg tagtgatact taaaggcatt tcaaaaggaa agataacaag tcttgaaatg
    20101 atatcgcaaa caagtaaaaa caaagctcca caaagtgcta tatagataag attttttcta
    20161 agattatcac ctagataaag agctactaaa tttgggataa ttagccctaa aaaagggata
    20221 atcccaacgc ttacaatcac taagctagtg ataatgctta caatcattaa gcctaaaaat
    20281 aatataccat tataagaaat tccaagattt aaagctatat cttcacccat gccaactatg
    20341 gtgattttat gagctaaaaa ataagcaagt ataaaaagtg gtaaagaaat gtagagcaat
    20401 tcataatttc cctgcataac atttgccata ctgccttgta gccaaccttg gatattttgt
    20461 atataattta aagcataggc aaaaaaagtg gttatagcac taataatacc tccaaacatc
    20521 aagcctatca aaggtacaaa aatcacatct ttgagtttga tttttcttaa aatttggata
    20581 aatataaaag aacccaaaag tgcaaatata gaagcaatga tagcttgagt gaaaaaagac
    20641 gctccagtaa aaaatattaa agaaataagt atgccaaatt tagcacaatc catggtccct
    20701 gctgtagttg gggaaacgaa tttattttgc gtgagttgtt gcatgataag cccacatata
    20761 ctaagactca ttcctgtgag taaaatcgct ataagtctag gaattcttgt gagagttatg
    20821 atttctagtt gagtggagtt aagattaaga atatctttta cattgatact gataactcct
    20881 ataaataaac ttatcattcc aaagaataaa agtaaagcta taagcacttt taaactcaat
    20941 atatgcttaa aaaacaaatc tttccttata gtaataataa ttatcaaaaa tgaaattgta
    21001 atgaaatttg ttttaagaaa tgataaaact ataaaggata ttttagtaag aaatcaaaaa
    21061 tccagtggaa agtctttgca agtgtttgtt atagtctata aggctttctc catagccatt
    21121 aaagtattgt aaataccaat aaattccgtt attaaaaata tcatatccta gatcaacttg
    21181 tatagcgcct ttgttattgt ggaatttaag attatttctt agcataagat tgataaaata
    21241 atcatcacct aaatacgcta aattcacatc aaaatttccc atataatgca agatggcagg
    21301 attatcatca tcttttttgt tttcaggaat tctataccaa aggcgtggaa caaataaaaa
    21361 tttattatat aaaatagcag tagatacata aattctattc catgagcgag attgtaaatt
    21421 ctcatctccc ttgccattgc tttcatgcaa tatacctacg cgtagattgt taaaaaattc
    21481 ataatcttta agatataaag gaagatctat aaaaaattct ggttgatagt tggtttctct
    21541 aaaaggagaa gaatgctcat aaatttgcca ccaagaagtt tgagtatagg ctatataata
    21601 tttttcatct agtcctagta aattttcaaa aagtcttttt ttaacactaa gttggaattt
    21661 cgcctcactc ttattattat ttactcctaa agaattaaaa ctataagcaa aaggtaaaaa
    21721 ataattcatc ttataagagc taatgccaag gggattaaag ctttcatttt caccaagata
    21781 attagccaaa gctaagcgag aaaagtcttg tttttcttct ttttttatag tgatagaatt
    21841 ttgcgtttgt gttgcttgac ttgagttatt ttgttcttga gaaatcaaaa cagatgaatt
    21901 ttttaaagcg agttttttgt aaatttccat agctttttta taatcgcctt gtttttcata
    21961 ctctaaagct tgttgtaaat cactagccca tataaaaacg cataagctta aaaataaagc
    22021 aatttttctc attttaactt gcttttaaat ttttcatatt cttcataaaa attaagattt
    22081 aaaaaagcat cttcatcttc aaattctaca aatttggttt taatctcaga aaataaaagt
    22141 cctatttttt gttcattttt ttctaagaaa tttttacaag tttgagctaa agagctgtga
    22201 taaaagccac ataagggatg tttatgcaaa ggggtttttg ctatgattat tttatagttt
    22261 tgttctaaaa aaggaagcat ttttaaaagt tcattttcac ctactttagg actatctaca
    22321 cttaaaacaa aaacaaattc atttttaaaa tttgaaagta tagagtaaag cgcaagcata
    22381 ggagagtaaa cttcaaattc taaagaatct tttatcaagc taaaatggtt ttcaaatttg
    22441 tcttctttcg cactcacata gacattttta aaaattttag aaaatttatc tacttgaaat
    22501 tgagttaaat tttgattttt aagaatcaat ttgcttttat cttgtcccat acggctagat
    22561 ttaccaccac ataaaatcac gcaatttagc tcattaagct gcacaaattt cctttttaat
    22621 gtaattctac cacaaaattc gccaaaatat tttataattt cttttatgaa atacacagaa
    22681 cttttacaat tacaaacttt tttttctcgg tttaaaaaaa ttgattttat caagcgtatc
    22741 aatgacaata ttttggaatt aagctttgat agagaaagat ttatttttga tcttactcgt
    22801 gcaatgagtg cgatttatac agctaaattt aatgcaaaaa attataatgc accttttgat
    22861 tttatgctta aaaagtattt tagcaatgct tttataaagg aagttaaagt ccttgaaggc
    22921 aatcgtattt tatgttttag tgtaaaagct aataaggctt ataaaagcta tgagagcaaa
    22981 atttattttg aatttacggg taaaaatacc aatgttattc ttacagatga aaaagatttg
    23041 atcatagagg ctttaagaca cattgataaa agttatcgtg ttgtaaaacc taatgtgatt
    23101 ttagagtctt taaagcctta taaaatggat gaaaattttg aggaaattaa agactttgca
    23161 gattattttt ctcgcaaatt tacaagcatt tatgagagta aaatcaaaca aataaaaaat
    23221 ttaaaacttg cacaagtgga taaaaaaata caaaatttac aagaactttt ttctagttta
    23281 gatgaagaaa attctttact cttaaaagct ttagaataca gaaaaagggc tgatgtattg
    23341 tttgcaaatt tgagtgtttt aaaagattat gaaagggaat ttaagcttga tgattttgaa
    23401 ggcaaagagc ttgaatttaa gcttgaattt aatcctaagc aaagcgctaa tttatattat
    23461 aaaaatgcta aaaaattaga acaaaaagct aaaaatttaa acatacaaag acaaaattta
    23521 aaagaaaagt tagattttac cttgagtttg aaagaattat tgcttcaagc taagagtgag
    23581 atagagcttg aaattttact acctaaaaaa aatagcaaaa aaaatcaaga tcataaacaa
    23641 gaagatcttg tcgcaaattt ttattttaac gagtttaaaa tttgcgtggg taaaaatgaa
    23701 aaaggcaatg aatttttact taaaaatgct aaaaaagatg atttgtggct tcatgtaagg
    23761 gatattccta gcgcacatac tttgattgta tcaaacaagc aaaaaatcag cctcgatgtg
    23821 atagaatttg ctgcaaggct ttgtgtaagc ttttctaagt taaagaaagg ttcgtattgg
    23881 gtcgattata ctttaaaaaa ttttgttaag gttcagcaaa aggcgtttgt aaattataca
    23941 aattttaaaa gtattaatat cacaaaggat taaaatgcca gttagccctt taggaaatat
    24001 caattatata aatcagaata tggcttatcc agctacacaa gcaagtaatg agcttgcaaa
    24061 agaaggtttt gcagctacgc taaatatggc tgaatttaat gaaaaagaaa aaactttaaa
    24121 caagcttgag aaagtcaatg agactcatga aatcaaagaa gagatcaaag aaaaagccga
    24181 acaagaagaa aaaaagaaaa aacacaatca agaagctaaa accagtgatg atgagaaaaa
    24241 tgaagaagat gagtctaaag atccaaattt taaagacgca caaagcattc atcgcttaga
    24301 tattagtata taaggaaaaa tatgtttaat acaactagaa ttatttcagc tcttgtgatg
    24361 ataggggcta ttattattat cgcgttgatt gatcaatttt ttatcaattt tatcgttttt
    24421 gcggttttat tgtatctatc ttttagtgaa gcaaaaaaac tttttgcttt agaaaatatc
    24481 tctattatcc ctttggctat agcttttatt ttgggaagtt tatcgcataa agctttgctt
    24541 tttgggattt tagttttgtt attagtcgtt ggatatttgg tttataaaaa ggcttcctta
    24601 aaaccagctc ttatttatat ttatcctagt ttgcctattt tagcactttg gcaagtgtat
    24661 ttagatcagg gtatgtttgc acttttttgg cttatcatta tcgttgcagc ttgtgatagt
    24721 ggggcgtatt ttatcggaaa acttatgggt aaaactcctt tttctccaac aagtccaaac
    24781 aaaaccttag aaggtgttat aggtggcttg atttgtgcga gtgttattgg aactattttg
    24841 ggagtttttg tttatagttt ttggctttct ttgctttgtt cgttttttgt agcgattttt
    24901 gcagtgattg gagatttgct tgagagttat tttaaaagag aagcaggtgt aaaagatagt
    24961 ggagatctta tccctggtca tgggggcgtg cttgatagga tcgatgcggt gatcattgct
    25021 gcttttgtga tggttgctct tttatgatac tttttggaag tacgggcagt ataggagtaa
    25081 atgctcttaa acttgctgct ttaaaaaaca ttcccatttc tgctttagct tgtggggata
    25141 acatcgctct tttaaatgag caaatcgcaa ggtttaaacc caaatttgtt tccataaaag
    25201 attcaaaaaa taagcattta gttaaacacg atagagtttt tatagggcaa gaaggtttag
    25261 agcaaatttt aacagaatgt caagataagc ttttactcaa tgccattgta ggttttgcag
    25321 gacttaaaag cactttaaag gctaaagagc ttggcaaaaa catagcttta gctaacaaag
    25381 aaagtcttgt agtagctggg agttttttga aaggggctaa atttttaccc gttgatagtg
    25441 agcatgcagc tttaaaattt ttactcgaag gtaaaaaaaa tatagcaaaa ctttatatca
    25501 cagcaagtgg tggagctttt tataggtata aaatcaaaga tttaaatcaa gtcagtgtca
    25561 aagatgcttt aaaacatcct aattggaaca tgggagcaaa gatcactata gatagtgcga
    25621 ctatggcaaa taagcttttt gagattatag aggcttatca tttatatgat tttaaagaaa
    25681 ttgatgcttt aatagaacca agatctttag tgcatgcaat gtgtgaattt aaaaatggag
    25741 ctagcacggc gtatttttca aaagcagata tgaaactagc tatttcagat gctatatttg
    25801 aaaaacaaga tacgcctatt ttagaggctg ttgattttag caaaatgcct gctttaaaat
    25861 ttcatccaat cagcacaaaa aaatatccta tttttaagct taaaaataca tttttaaaag
    25921 agccaaattt aggtgttatc atcaatgctg ctaatgaagt tggtgtttat aattttttag
    25981 aaaataaaag tggattttta gacattgcta aatgcatttt taaagccctt gatcattttg
    26041 gagtgcctaa aatttcaagc atagaagaag tttttgagta tgattttaaa acaagagagt
    26101 atttaaggag ttaaaatgaa atttttttta acaattttat tttttataac aagcattttt
    26161 gctttagagc tagactttag cgtaggagaa aatggaaaaa gtctagatga taataataca
    26221 gttttaattt ttggtggaat tcaaggcgat gagcctggtg gatttcatgc ggcaagtttg
    26281 cttttgagtg attataatat cactaagggt aagattatag tggctccaaa tttagctttt
    26341 gatagcatta tcaagcgttc tcgtgggaat aatggggatt taaaccgtaa atttgcaagc
    26401 attagcccaa aagatcctga ttataaaacc gttcaacgca ttaaagagct tattttactt
    26461 cctgaagtta gtatggtgat caatcttcac gatggttggg gtttttataa acccacttat
    26521 atcgatgcga tgcaaaatcc taagcgttgg ggaaattcaa gcgtgattga tacaagcgaa
    26581 atcaatgcaa gcaaataccc tgatcttgaa aatatcgcca ctcaaaccgt aaatagtgtc
    26641 aattcttcgc ttgctgatcc aaagcatgct tatcatctta aaaacaccaa aacccaagag
    26701 cttggcgata cggaaatgct taaagcttta acttattttg tgatttcaaa tcacaaagcc
    26761 gcttttgcaa atgaagcgag taaaaatctg cctgtaaatt taagagctta ttatcatctt
    26821 ttggcaattg aaaattattt aaaaactgca ggaattgaat ttagcagaga tttcgaactc
    26881 actccacaag gagttgataa agccataaat aaagagcttg aagtaaaact ttttgatgat
    26941 agaattttac tttctttaaa aaatccaaga aaggttatca actatgtgcc ttttccggta
    27001 aataaagagt taaattataa cacaagcaat gaacttacgg ctgttatcgc agaaggaaat
    27061 tctttttata tccaatatgg caatcgtttt caaacaagat tatatcctga gtatttagaa
    27121 tttagcgatg cttttaatga agtaactttt caagttgatg gcaatgaaac cacagttcct
    27181 tttggaacca aggtaaaagt aaaagagaat tttcttattc caaagatagc taatgtgcgc
    27241 gtaaatatca taggctttga tcactcaaaa gatgaaagtg gtattttagt tcataaaaaa
    27301 aatatgcaaa cacaatactc tttagacatg gcaggtaaaa tttatagagc ggaattttat
    27361 gagttaagag gtgcaaattt gcaacaactt ttagaggcaa atatcaatag caagttgatc
    27421 aaaaacgcta aaaatttgga tttaaatact cttaaaatgg caagatcaaa agataaattc
    27481 ttaggttcta ttttagtgga atttgaatga aaaatcttat cctagctata gaaagttctt
    27541 gtgatgatag ttctatagct atcattgata aaaacacctt agaatgtaaa tttcataaaa
    27601 aaatttccca agaattagat catagtatct atgggggagt ggtacctgaa cttgctgcaa
    27661 gacttcatag cgaggcttta ccaaagatgc ttaagcaatg caaagagcat tttaaaaatc
    27721 tttgtgccat agctgtgaca aatgaacctg gacttagtgt ttctttgctc agtggaattt
    27781 ctatggcaaa aaccttagca agtgcgctaa atttaccctt aatccctata aatcatctta
    27841 aaggtcatat ttatagtctt tttttggaag aaaaaatttc tttagatatg ggaattttgc
    27901 ttgttagtgg tgggcatacc atggtgcttt atcttaaaga tgatgcaagc ttagagcttt
    27961 tagcaagtac aaatgatgat agctttggag aaagttttga taaagtggct aaaatgatga
    28021 atttaggtta ccctggtggg gtcatcatag aaaatttagc aaaaaatgcc aaacttaaaa
    28081 atatctcttt taacacacct ttaaagcatt ctaaagaact cgctttcagt ttttcagggc
    28141 ttaaaaatgc agtgcgtttg gaaattttaa aacatgaaaa tttaaatgaa gacacaaaag
    28201 cagaaatagc ttatgccttt gaaaatacag cttgtgatca tatcatggat aaattagaaa
    28261 aa
//
LOCUS       DAPIYB010000011        26723 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.011, whole genome shotgun sequence.
ACCESSION   DAPIYB010000011 DAPIYB010000000
VERSION     DAPIYB010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26723)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26723)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26723
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.011"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            66..1061
                     /locus_tag="RJ318_000370"
     CDS             66..1061
                     /locus_tag="RJ318_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide synthesis protein"
                     /protein_id="HDV7430268.1"
                     /translation="MQIQQNNSLIYNTLTKKLSSFIPIKSTRRKLRNHIQYKLEHPKV
                     TNYLSNNYINPFLEGKIPHFDFEKKHYFKNDKIIWQFWYQGKNQASPMIQQCFNSVQS
                     QMKDDYTIIILDKDNIKDYLDFPPFVIEKLENNFFGEKTITFFSDLLRVCLLATYGGI
                     WCDASIFLSSKIPSELCDKDFFTFERSKIKPSKEKLKKFIKSGYFSYGYFNWNDDFKV
                     KMLSSFMIAKTNNTFIQTLKDILMNYWKNEQSSENHYYFILHIIFELLKEHGFVNDIY
                     KNMSDIECHLLQFSAKEKFNSTLWEEIQKQSFLHKLTHFKSIKKDSMIDKIILQS"
     gene            complement(1045..2217)
                     /locus_tag="RJ318_000371"
     CDS             complement(1045..2217)
                     /locus_tag="RJ318_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7430269.1"
                     /translation="MKKVGVVIPIYNVEKYLKECLDSVINQTYTNLEIILVNDGSTDE
                     NSLNIAKEYTLKDKRIILFDKKNGGLSSARNVGIEYFSGEYETQYIEKENELNVFKII
                     GDNPQNIYKIYKYKNALASDKLEISKIDYIIFLDSDNYWELNCIEECVVRMQNVDVLW
                     FDHACIYDDGIEDKGQKTRMNVFNFTQECTITPRDYAKQAIKVGSRDISFSWGGMIDF
                     SFLKQLKLKFINKIINEDIHFGMVLFASADSIYILPKRLYLCRLRANSISNHDKKVTK
                     ANVSEYFKDLYEFFGENAKEAKNYLKAASRMITALELIEFFKDQKNENSQAIKEAFLP
                     FYVKKALMIKKFKKDPLNLKEKLPIIKPFIQTKIPYDLWKIWQKIKGILDKINFAK"
     gene            complement(2221..3768)
                     /locus_tag="RJ318_000372"
     CDS             complement(2221..3768)
                     /locus_tag="RJ318_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDV7430270.1"
                     /translation="MNLKQISAIIIVKNAKQTLLECLNSLKDFDEIILLNNESSDNTL
                     NIANEFKKDFANLHIYHSAFIGFGALKNLALSYAKNDWILSIDADEVLENECIKELKN
                     LELQEDNIIALSRKNLYKGEWIKACGWWPDYVWRIFNKNFTRFNDNLVHESLVLPSNA
                     KKIYLKNGLRHYAFRDISHLIDKMQYYSSLWAKQNIHKKSGVLKANLRAFWTFFRNYF
                     LKNGFLYGYKGFIISVCNALGTFFKYMKLYELQKQKPKTCALIITTYNQKERLKLALD
                     SVKNLAFLPNEVLIADDGSKEDTARLIEEYQKDFPCPLKHIWQEDEGFRAAKSRNNAI
                     KASKSEYIILIDGDMILEKDFVKNHLEFAKRKVILQGSRVILNKNESEEILKNNNYSL
                     AFNKKGFKNQRSIFLAKCVYKFSKLTKKFFKKSQLVKGSKTCNMSFYKSDFEAIEGFN
                     EKFIGWGREDSEFVARFLFNDGVFKRLKFNALAYHIYHEENSKNMLEINHQIYLETIK
                     NEKTTWR"
     gene            complement(3765..4652)
                     /gene="htrB"
                     /locus_tag="RJ318_000373"
     CDS             complement(3765..4652)
                     /gene="htrB"
                     /locus_tag="RJ318_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase
                     HtrB"
                     /protein_id="HDV7430271.1"
                     /translation="MKNSDRIYLSLYYILKFFVTFMPECILHFLALIVARIAFYLNKK
                     HRKIINTNLQICFPQYTQKERDKLSLKIYENFAQFGIDCLQNQNTTKEKILNKVNFIN
                     ENFLIDALALNRPIIFTTAHYGNWEILSLAYAAKYGAISIVGKKLKSEIMYEILSQSR
                     TQFDIELIDKKGGIRQMLSALKKGRTLGILTDQDCVENESVRLKFFNKEVNYQMGASL
                     IAQRSNALIIPVYAYKEDGKFCIEFFKVKDSQNASLEELTLYQAQSCEEMIKKRPWEY
                     FFFHRRFASYNKEIYKDAK"
     gene            complement(4642..5670)
                     /gene="waaC"
                     /locus_tag="RJ318_000374"
     CDS             complement(4642..5670)
                     /gene="waaC"
                     /locus_tag="RJ318_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HDV7430272.1"
                     /translation="MKIAIVRLSALGDIIQSAVVLQFIKNFKKDIEIHWFVDEKFEGI
                     LKNHPLINKLYALPLKDKKILKSLKILLKARKNNYNAVIDLQGLIKSAIVSRILSRNN
                     FGFDKNSLKESFAHNFYNQKLELDYNENVFVRYLSLTSFMLNTDFNVKNLAFKQDIFS
                     VDENLKQLLNNKLKLDKNEKNILIHVGSSVENKIYPKTKLAILCKLLINEFQQTKIWL
                     AWGNVKEYEFAKEVLNLSGIDETHIELAPKFNLEELMAFTKMMNLIIGNDSGPTHLAF
                     ALNKASITIFGATPSYRNAFQTHINKIIDAGKKIQNAKHIDKSDFCITRIEEEDIFKL
                     AKGLLNEK"
     gene            5736..6530
                     /locus_tag="RJ318_000375"
     CDS             5736..6530
                     /locus_tag="RJ318_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDV7430273.1"
                     /translation="MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQK
                     EQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKIDGQNEKEMIANFFNFIENYEPKL
                     VSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNG
                     RGIKLDTLCSMVGLPGKYDVHGDEVMKLFYENKLEKIHEYCESDVLNTYMLFLKYELI
                     KANVDEEDYVGFLSYMRDFLCAKKSDRSYTEVFAKACESEISKVRS"
     gene            6588..7574
                     /gene="galE"
                     /locus_tag="RJ318_000376"
     CDS             6588..7574
                     /gene="galE"
                     /locus_tag="RJ318_000376"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDV7430274.1"
                     /translation="MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDL
                     QKIRAFKFFEQDLSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNT
                     TNLIETCLQTGVNKFIFSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDA
                     SMANPEFKHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDY
                     DTKDGTCIRDFIHVDDISSAHLAALDYLKENESNVFNVGYGHGFSVKEVIEAMKKVSG
                     VDFKVELAPRRAGDPSVLISDASKIRNLTSWQPKYDDLELICKSAFDWEKQC"
     gene            7568..9262
                     /gene="pglK"
                     /locus_tag="RJ318_000377"
     CDS             7568..9262
                     /gene="pglK"
                     /locus_tag="RJ318_000377"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type lipopolysaccharide transporter PglK"
                     /protein_id="HDV7430275.1"
                     /translation="MLKKLFFILSKEDKNFLFFLLVFSVFISFIETFAISLVMPFITL
                     ASDFSYFDRNKYLISLKEYLNIPVFEIIVYFGVGLIVFYVFRALLNAYYFHLLARFSK
                     GRYHAIAYKVFSKFLNINYEKFTQKNQSEILKSITGEVYNLSTMISSFLLLMSEIFVV
                     LLLYALMLLINYKITLFLSIFMVLNAFILVKILSPIIKKAGVRREEAMKNFFEILNTN
                     LNNFKFIKLKTKEDGVLSLFKAQSEAFSKANITNESVAAVPRIYLEGIGFCVLVFIVV
                     FLVLKNESDISGILSTISIFVLALYRLMPSANRIITSYHDLLYYHSSLDIIYQNLRQE
                     EENLGEEKLSFNQELKICNLSFGYEGKKYLFKNLNLNIKKGEKIAFIGESGCGKSTLV
                     DLIIGLLKPKEGQILIDEQELNANNTKNYRQKIGYIPQNIYLFNDSIAKNITFGDAVD
                     EEKLNRVIKQANLEHFIKNLPQGVQTKVGDGGSNLSGGQKQRIAIARALYLEPEMLVL
                     DEATSALDTQSEAKIMDEIYKISKDKTMIIIAHRLSTITQCDKVYRLEHGKLKEEK"
     gene            9259..10338
                     /gene="pglH"
                     /locus_tag="RJ318_000378"
     CDS             9259..10338
                     /gene="pglH"
                     /locus_tag="RJ318_000378"
                     /EC_number="2.4.1.292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-
                     diNAcBac-PP-undecaprenol
                     alpha-1,4-N-acetyl-D-galactosaminyltransferase"
                     /protein_id="HDV7430276.1"
                     /translation="MMKISFIIATLNSGGAERALVTLANALCKEHEVSIIKFHAGESF
                     YKLENEVKVTSLEQFRFDTLYHKIASRFKKFFALRKALKESKSDVFISFLDTTNIACI
                     AAKIGLKTPLIISEHSNEAYLKPKIWRFLRRVSYPFCDALSVLGSSDKVYYERFVKRV
                     KLLLNPCHFSDEISFDSSFEKENLVLFIGRLDHNKNPVMFLKAIAHLDKNLQENYKFV
                     IAGDGQLRQELEYKVKSLGIKVDFLGRVENVKALYEKAKVLCLCSFVEGLPTVLIESL
                     YFEVCRISSSYYNGAKDLIKDNHDGLLVGCDDEIALAKKLELVLNDENFRKELVNNAK
                     QRCKDFEISHIKEEWLKLIAEVKNA"
     gene            10331..11260
                     /gene="pglI"
                     /locus_tag="RJ318_000379"
     CDS             10331..11260
                     /gene="pglI"
                     /locus_tag="RJ318_000379"
                     /EC_number="2.4.1.293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GalNAc(5)-diNAcBac-PP-undecaprenol
                     beta-1,3-glucosyltransferase"
                     /protein_id="HDV7430277.1"
                     /translation="MPKLSVIVPTFNRQVLLEKAIKSIQNQDFKDLEIIVSDDNSSDD
                     TKSVVQNLQKDDDRIKYFLNQNYKQGPNGNKNNGLDQASGEFVTFLDDDDELLSGALS
                     TLMQKANEGYAHVFGNCLIEKEGNLSKEFSGKGLEKDSEISKKDFLMAKFSGEFFSVF
                     KKSLLENKRFNEEFYGNEATLWVNLYKEKSFYIHKAFRIYRIFRQDSVTLGASKNAYR
                     VYLGYLELAKILENELRMSKDKDYKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSI
                     KINAPALILLILSIIPNNMIEKLSKIRVALCKN"
     gene            11248..12345
                     /gene="pglJ"
                     /locus_tag="RJ318_000380"
     CDS             11248..12345
                     /gene="pglJ"
                     /locus_tag="RJ318_000380"
                     /EC_number="2.4.1.291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylgalactosamine-N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     4-alpha-N-acetylgalactosaminyltransferase"
                     /protein_id="HDV7430278.1"
                     /translation="MQKLGIFIYSLGSGGAERVVATLLPILSLKFEVHLILMNDKISY
                     EIPECQIHFLECSKPSENPILKFLKLPFLALKYKKLCRNLGIDTEFVFLNRPNYIALM
                     ARMFGNKTRLVINECTTPSVMYMKNNFNSLVNKFLISLLYPKADLILPNSKGNLEDLV
                     QNFSISPKKCEILYNAIDLENIGQKALEDIALKDKFILSVGRLDKGKNHALLIRAYAR
                     LKTDLKLVILGEGVLKDELLALIKELNLEEKVLLLGFDNNPYKYMAKCEFFAFASVFE
                     GFSNVLIESLACSCAVVCTDHKSGARELFGDDEFGLLVEVDNENSMFQGLKTMLEDDK
                     LRKAYKNKAKTRAKAFDKVKIARDALKYLLG"
     gene            12349..14490
                     /gene="pglB"
                     /locus_tag="RJ318_000381"
     CDS             12349..14490
                     /gene="pglB"
                     /locus_tag="RJ318_000381"
                     /EC_number="2.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphooligosaccharide--protein
                     glycotransferase"
                     /protein_id="HDV7430279.1"
                     /translation="MLKKEYLKNPYLVLFAMIVLAYVFSVFCRFYWVWWASEFNEYFF
                     NNQLMIISNDGYAFAEGARDMIAGFHQPNDLSYYGSSLSTLTYWLYKITPFSFESIIL
                     YMSTFLSSLVVIPIILLANEYKRPLMGFVAALLASVANSYYNRTMSGYYDTDMLVIVL
                     PMFILFFMVRMILKKDFFSLIALPLFIGIYLWWYPSSYTLNVALIGLFLIYTLIFHRK
                     EKIFYIAVILSSLTLSNIAWFYQSAIIVILFALFALEQKRLNFMIIGILGSATLIFLI
                     LSGGVDPILYQLKFYIFRSDESANLTQGFMYFNVNQTIQEVENVDFSEFMRRISGSEI
                     VFLFSLFGFVWLLRKHKSMIMALPILVLGFLALKGGLRFTIYSVPVMALGFGFLLSEF
                     KAILVKKYSQLTSNVCIVFATILTLAPVFIHIYNYKAPTVFSQNEASLLNQLKNIANR
                     EDYVVTWWDYGYPVRYYSDVKTLVDGGKHLGKDNFFPSFSLSKDEQAAANMARLSVEY
                     TEKSFYAPQNDILKSDILQAMMKDYNQSNVDLFLASLSKPDFKIDTPKTRDIYLYMPA
                     RMSLIFSTVASFSFINLDTGVLDKPFTFSTAYPLDVKNGEIYLSNGVVLSDDFRSFKI
                     GDNVVSVNSIVEINSIKQGEYKITPIDDKAQFYIFYLKDSAIPYAQFILMDKTMFNSA
                     YVQMFFLGNYDKNLFDLVINSRDAKVFKLKI"
     gene            14500..15630
                     /gene="pglA"
                     /locus_tag="RJ318_000382"
     CDS             14500..15630
                     /gene="pglA"
                     /locus_tag="RJ318_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     alpha-1,3-N-acetylgalactosaminyltransferase"
                     /protein_id="HDV7430280.1"
                     /translation="MRIGFLSHAGASIYHFRMPIIKALKDRKDEVFVIVPQDEYTQKL
                     RDLGLKVIVYEFSRASLNPFVVLKNFFYLAKVLKNLNLDFIQSAAHKSNTFGILAAKW
                     AKIPYRFALVEGLGSFYIDQGFKANLVRFVINSLYKLSFKFAHQFIFVNESNAEFMRN
                     LGLKENKICVIKSVGINLKKFFPIYVESEKKELFWKNLNIDKKPIVLMIARALWHKGV
                     KEFYESATMLKDKANFVLVGGRDENPSCASLEFLNSGAVHYLGARSDIVELLQNCDIF
                     VLPSYKEGFPVSVLEAKACGKAIVVSDCEGCVEAISNAYDGLWAKTKNAKDLSEKISL
                     LLEDEKLRLNLAKNAAQDALQYDENIIAQRYLKLYDRVIKNV"
     gene            15623..16225
                     /gene="pglC"
                     /locus_tag="RJ318_000383"
     CDS             15623..16225
                     /gene="pglC"
                     /locus_tag="RJ318_000383"
                     /EC_number="2.7.8.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl phosphate
                     N,N'-diacetylbacillosamine 1-phosphate transferase"
                     /protein_id="HDV7430281.1"
                     /translation="MYEKVFKRIFDFILALVLLVLFSPVILITALLLKITQGSVIFTQ
                     NRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLKAFGKIVRSLSLDELLQLFNVLK
                     GDMSFVGPRPLLVEYLPLYNKEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
                     KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN"
     gene            16212..16799
                     /gene="pglD"
                     /locus_tag="RJ318_000384"
     CDS             16212..16799
                     /gene="pglD"
                     /locus_tag="RJ318_000384"
                     /EC_number="2.3.1.203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine N-acetyltransferase"
                     /protein_id="HDV7430282.1"
                     /translation="MARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFES
                     TLPKYDFFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPY
                     VVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVL
                     PNLSLADDSILGGGATLVKNQDEKGVFVGVPAKRM"
     gene            16756..17409
                     /locus_tag="RJ318_000385"
     CDS             16756..17409
                     /locus_tag="RJ318_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430283.1"
                     /translation="MKKVFLWEYLQKGCKLHFNNNLVVHYIVNPSPLGWIVINLLTIC
                     LICYIFPLKNSLKHKKLFSLKANVNSKNSRIIKYTGIAAFLGGLIGIWYNFEGFYQLL
                     FFFELENENLKTLWSLQVSVSSVITGMLLLLIYVINLAMVCENGIYIVSKFNLFYMYF
                     IKREDLEIVKIEKMKFLNQVEVCFVIKTKNEILLKCFESIYKKEDLEKLKNWYENKL"
     gene            17505..18665
                     /gene="pglE"
                     /locus_tag="RJ318_000386"
     CDS             17505..18665
                     /gene="pglE"
                     /locus_tag="RJ318_000386"
                     /EC_number="2.6.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine transaminase"
                     /protein_id="HDV7430284.1"
                     /translation="MRFFLSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKAY
                     SKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCD
                     ETYNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVEICKENEIVLIEDAAEAL
                     GSFYKNKALGTFGEFGAYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLH
                     YEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGECFSFLDELENS
                     RSNRWLSTALIDFDKNELNSCQKDINISQKNITLHPKISKLIEDLKNEQIETRPLWKA
                     MHAQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA"
     gene            18667..20439
                     /gene="pglF"
                     /locus_tag="RJ318_000387"
     CDS             18667..20439
                     /gene="pglF"
                     /locus_tag="RJ318_000387"
                     /EC_number="4.2.1.135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (configuration-retaining)"
                     /protein_id="HDV7430285.1"
                     /translation="MIFYKSKRLAFFLTSDIVLILLSVYLAFSLRFSGDIPSIFYHGM
                     MVSAIILLVLKLSFLFVFRIYKVAWRFFSLNEARKIFIALLLAEFCFFLIFYFFSDFF
                     NPFPRSAIVIDFVLSYMFIGTLRISKRMLVDFKPSRMKEEETPCIVVGATSKALHLLK
                     GAKEGSLGLFPVGVVDARKELIGTYCDKFIVEEKEKIKSYVEQGVKTAIIALRLEQEE
                     LKKLFEELVAYGICDVKIFSFTRNEARDISIEDLLARKPKDLDDSAVAAFLKDKVVLV
                     SGAGGTIGSELCKQCIKFGAKHLIMVDHSEYNLYKINDDLNLYKEKITPILLSILDKQ
                     SLDEVLKTYKPELILHAAAYKHVPLCEQNPHSAVINNILGTKILCDSAKENKVAKFVM
                     ISTDKAVRPTNIMGCTKRVCELYTLSMSDENFEVACVRFGNVLGSSGSVIPKFKAQIA
                     NNEPLTLTHPDIVRYFMLVAEAVQLVLQAGAIAKGGELFVLDMGKPVKIIDLAKKMLL
                     LSNRNDLEIKITGLRKGEKLYEELLIDENDAKTQYESIFVAKNEKVDLDWLNKEIENL
                     QICEDISEALLKIVPEFKHNKEGV"
     gene            20439..21332
                     /locus_tag="RJ318_000388"
     CDS             20439..21332
                     /locus_tag="RJ318_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDV7430286.1"
                     /translation="MYIKDIQRFEDNRYRARAYMSYILTRNLPNKLPDIHLETIKTAL
                     DKIAHEVVVFDALYILDISGMQIENAISLNKAHEIGQGEDRSTRSYFYRAVKLRRCVL
                     SDPYPSVLNNELCVTASMPIYDDKNNLLFVVCIDIKLEDILKIIQAGKFEFVFTQFSR
                     LVYFCFALVLFVITCFLFQKGFFSLFDNQAIGIEHMFESTIAITLALAIFDLAKTLIE
                     QEVLGRTKKEEGGIQKTMVRFLGSIIIALAIEALMLVFKLAIGDLSQMIYAIYLIGGV
                     SLLLLGLSVYLFTVKYKNNNI"
     gene            21445..21837
                     /locus_tag="RJ318_000389"
     CDS             21445..21837
                     /locus_tag="RJ318_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HDV7430287.1"
                     /translation="MKLLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKN
                     EDVKVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNY
                     IVKPFTPQVLKEKLEDVLGTGSGEGAAE"
     gene            21860..22705
                     /locus_tag="RJ318_000390"
     CDS             21860..22705
                     /locus_tag="RJ318_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDV7430288.1"
                     /translation="MQKKYYELFFIVEEQYKNLFLDFAFDLGIEAIEEKDNGVYIRSH
                     ESLEEFSWALEIFAQKLTTTFNLNHKIISNLSLVEKENKDWIQEYKKGIKPILVDNVY
                     IHTTWQEEKKNCINIKINPALAFGSGHHESTYSCVKFLQKFSKSKLRALDLGCGSGIL
                     GIIMAKFGCNVEICDTDELAIDSSLENARLNGVDFHKAWCGSIDKANGLYNLIVANII
                     ADVILILEKDIKNHLEDNAILILSGILDKYSTRIKEKFQDLELIDEMQINEWCSFVYK
                     NNKKG"
     gene            22709..24646
                     /gene="ftsH"
                     /locus_tag="RJ318_000391"
     CDS             22709..24646
                     /gene="ftsH"
                     /locus_tag="RJ318_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDV7430289.1"
                     /translation="MNNNTQNNKGNPQGNNFFNKNPIFIFAIFAIIMIIIFKGFFDGN
                     GSFGGALNGNEVNKNVPYSELKKLIESGQINQVSIGQTTIKAISSSHNTVYTAKKVND
                     PELVSLLDSKNIAYGAYSETNWFTDILFSWVLPVFIFFGIWMFLASRMQKNMGSSILG
                     IGSSKKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVG
                     PPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFI
                     DEIDAIGKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAA
                     LLRPGRFDRQVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANI
                     INEAALLAGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIA
                     ETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVF
                     IGEISTGASNDLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTIKDYSEKM
                     AESLDDYVKKTLDERYKDVKDTLNTYKGAIETMVAALYEEETIEGNKVREIIKEFEDQ
                     NSLPTRLQELEEVKTEVKVEE"
     gene            24643..25260
                     /locus_tag="RJ318_000392"
     CDS             24643..25260
                     /locus_tag="RJ318_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDV7430290.1"
                     /translation="MKDFIAKYGYLSLIILSLIFIFVWIFYSFSILLLALIVICIFLF
                     RAPKRELVCSDEKAIFAPMDGRVTKIENIHHKDLGECVEIAIKNALYDAGNFNTPFAM
                     SIIDIRLRHGLFLCSELKSAKMMNERAFILAKVKENKTIALRIYAGSFDRKLKLDNIS
                     HDLKAGDRMGFLINGSISLLLPKDTRIHIGLNDEIKAGSLLGYFA"
     gene            25270..25998
                     /gene="pssA"
                     /locus_tag="RJ318_000393"
     CDS             25270..25998
                     /gene="pssA"
                     /locus_tag="RJ318_000393"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDV7430291.1"
                     /translation="MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYTALIYIIL
                     SLICDGLDGRVARLTNSTSKFGVEFDSLADLVAFGVAPAVLFYMAIGYDFGKLGSLIT
                     AFFVVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSTIWTYAFISYDFLKPYGVVF
                     LVLQAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASL
                     YVLYGIIRVLYTIIVSKFKIRNQE"
     gene            complement(25989..>26723)
                     /locus_tag="RJ318_000394"
     CDS             complement(25989..>26723)
                     /locus_tag="RJ318_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HDV7430292.1"
                     /translation="FHSFQNFYEDFKSHKFNFNHEHQSIFKKNTSQQITLLHPTRIRR
                     PKFVNSTHALAKIIHSVAHIEFNAINLALDASYRFKNLPLQFYYDWLEVADEEIKHFK
                     LLNSVLKELGYKYGNFPVHDNLESALEATKDSLSFRMGVVHRGLEAKGLDANPFVVQK
                     LQSSNHSIKNLLMEYLEIILNDEIKHVKKGDTWWKFANQNRYDFIELCKTFKQFSLAG
                     KKLNIQARIKAGFTQEECEVIEKFYS"
BASE COUNT         9115 a         3233 c         4663 g         9712 t
ORIGIN      
        1 gttttcatat atacataacc ttaattattt ttgatattat atcaaaaaac tttttaggaa
       61 tatatatgca aatacaacaa aacaattctt taatttataa tactttaaca aaaaaactaa
      121 gctcatttat acccataaaa tcaacaagaa gaaaattaag aaatcatatt caatataagc
      181 tagaacaccc taaagtgact aattatcttt caaacaacta tattaatcct tttttagaag
      241 ggaaaattcc tcattttgat tttgaaaaaa aacattattt taaaaacgat aaaattattt
      301 ggcaattttg gtatcaaggt aaaaatcaag cttcacctat gatacaacaa tgttttaact
      361 ctgtacaaag tcaaatgaaa gatgactaca caattatcat tttagataaa gataatataa
      421 aagattacct tgattttcca ccatttgtta tagaaaaatt agaaaataat ttttttggag
      481 aaaaaactat aacttttttt tcagatcttt taagagtatg cttgcttgca acttatggag
      541 gtatatggtg tgatgcaagt atatttttaa gttctaaaat tcctagtgaa ctttgtgata
      601 aagacttttt tacctttgaa agatcaaaaa taaaacctag taaagaaaaa ttgaaaaaat
      661 ttatcaaaag tggatatttt tcttatggat actttaactg gaatgatgat tttaaagtta
      721 aaatgctaag tagttttatg atagccaaaa caaacaatac ttttattcaa actctaaaag
      781 atattttaat gaattattgg aaaaatgagc aatcaagtga aaatcactat tattttatac
      841 tacatatcat atttgaactt ttaaaagagc atggctttgt aaatgatatc tataaaaaca
      901 tgagcgatat agaatgccat ttattacaat ttagtgccaa agaaaaattt aattcaactc
      961 tttgggaaga aattcaaaaa caaagctttt tacacaaact cacgcatttt aaatctataa
     1021 aaaaagattc aatgatagat aaaatcattt tgcaaagttg attttatcta aaataccctt
     1081 tattttttgc caaattttcc aaagatcata aggaattttt gtttggataa aaggtttaat
     1141 tataggtaat ttttccttta aattcaaagg atctttttta aattttttaa tcatcaaagc
     1201 cttttttaca taaaaaggca aaaaagcctc ttttatggct tgagaatttt catttttttg
     1261 atctttaaaa aattctatca actccaaagc tgttatcatc ctacttgctg cttttaaata
     1321 gttttttgcc tctttagcat tttctccaaa aaattcatac aagtctttaa aatactctga
     1381 cacatttgcc tttgtaactt ttttatcatg atttgatata ctatttgccc tcaaacggca
     1441 taagtacaat ctttttggta aaatatagat actatcagca ctcgcaaaca aaaccatgcc
     1501 aaaatgaata tcttcattga tgattttgtt gataaattta agttttaatt gttttaaaaa
     1561 tgaaaaatct atcataccac cccagctaaa cgagatatcc ctcgaaccta cttttatagc
     1621 ttgcttagca tagtctcttg gagtgatagt gcattcttga gtaaaattaa atacattcat
     1681 ccttgttttt tgacccttat cttctatacc atcatcataa atacaagcat ggtcaaacca
     1741 taatacatct acattttgca ttcttacaac acactcttct atgcagttta actcccaata
     1801 attatcagaa tctaaaaaga taatataatc aatctttgaa atttctagct tatcactcgc
     1861 taaagcattt ttgtacttat aaattttata aatattttgt ggattatcgc caataatctt
     1921 aaaaacattt aattcatttt ctttttcaat atattgtgtt tcatattctc cactaaaata
     1981 ttctatacct acatttctag cactacttaa accaccattt tttttatcaa aaagaattat
     2041 tcttttatct tttaaagtat attcttttgc aatattgagt gagttttcat ctgtactacc
     2101 atcatttact agtatgattt ctaaattagt ataagtttga ttgattacac tatctaaaca
     2161 ttcttttaga tatttttcta cattgtatat ggggattact acacctactt ttttcatgtt
     2221 ttatctccaa gttgtttttt cattttttat agtttcaaga taaatttgat gattgatttc
     2281 gagcatattt ttgctatttt cttcatgata gatatgataa gccagagcat taaatttaag
     2341 ccttttaaac actccatcat taaataaaaa tctagctaca aactcactat cttccctacc
     2401 ccagcctata aatttttcat taaatccctc aatggcttca aaatcacttt tataaaaact
     2461 catattgcaa gttttactac ctttaacaag ttgtgatttt ttaaaaaatt tcttagttag
     2521 ttttgaaaat ttatatacac atttagctaa aaaaatactt ctttgatttt taaaaccttt
     2581 tttattaaaa gctaaactat aattattgtt ttttaagatt tcttcgcttt catttttatt
     2641 taaaattact cttgaacctt gtaaaattac tttgcgtttt gcaaattcta aatgattttt
     2701 tacaaagtct ttttctaaaa tcatatcacc atcaattaaa attatatatt cacttttaga
     2761 agctttaata gcattatttc tactttttgc agcacgaaaa ccctcatctt cttgccaaat
     2821 gtgttttaaa gggcaaggaa aatctttttg atattcttca ataagccttg ctgtatcttc
     2881 tttgctacca tcatctgcga ttaaaacttc attgggtaaa aaggctagat ttttaacact
     2941 atcaagcgct aatttaaggc gttctttttg attataagtt gttattatta aagcgcaagt
     3001 ttttggcttt tgcttttgaa gttcatataa tttcatgtat ttaaaaaaag tccctaaggc
     3061 attgcaaacg ctaattataa aacccttata accatataaa aagccatttt ttaaaaaata
     3121 atttctaaaa aaagtccaaa aagctcttaa atttgctttt aaaacaccac tttttttgtg
     3181 tatattttgt tttgcccaaa ggcttgagta gtactgcatt ttgtcaatta ggtgggaaat
     3241 atctctaaaa gcataatgcc ttaatccatt tttaagataa atttttttag cattacttgg
     3301 caaaacaagg ctttcatgta ctaaattatc attaaaacga gtgaaatttt tattaaaaat
     3361 tctccaaaca taatcaggcc accaaccaca tgcctttatc cattcgcctt tatagagatt
     3421 tttacgacta agtgcgatga tattatcttc ttgaagttct aaatttttaa gctctttaat
     3481 acactcattt tcaagcactt catcagcatc aatgcttaaa atccaatcat tttttgcata
     3541 acttaaagca aggtttttta aagctccaaa acctataaaa gcactgtggt aaatgtgcaa
     3601 attagcaaaa tcttttttaa attcattagc tatatttagg gtattatcac tactttcatt
     3661 gttaagtaaa ataatttcat caaaatcttt taaagaattt aaacattcaa gcaaggtttg
     3721 ttttgcattt tttacgatga taatagcact tatttgcttt agattcattt tgcatccttg
     3781 taaatttcct tattataact tgcaaagcgt ctatgaaaaa aaaagtattc ccaaggtctt
     3841 tttttaatca tttcttcgca actttgtgct tgataaagtg tcagttcttc taagcttgca
     3901 ttttgagaat cttttacttt aaaaaactct atgcaaaatt taccatcttc tttataggca
     3961 taaacaggga tgatcaaagc attacttctt tgtgcgataa ggcttgctcc catttgataa
     4021 ttcacttctt tgttaaaaaa ttttaatctt acgctttcgt tttctacaca gtcttgatca
     4081 gttaaaattc ccaaagttct cccttttttt agagcgctta gcatttgtct tatgccgcct
     4141 tttttgtcga taagttctat gtcaaattgg gtgcgacttt ggcttaaaat ttcatacata
     4201 atttcacttt ttaacttttt ccctactata gaaatcgcac catatttagc tgcataagca
     4261 aggcttaaaa tttcccagtt tccatagtgt gcagttgtga agataatagg acgatttaaa
     4321 gctagagcat ctataagaaa attttcattg atgaaattta ctttattgag aattttttct
     4381 ttggtggtgt tttgattttg caaacaatca atcccaaatt gagcaaaatt ttcataaatt
     4441 tttaaagaca atttatcgcg ttctttttga gtgtattgag gaaaacagat ttgcaaattt
     4501 gtattgatga ttttgcggtg ttttttgtta agataaaaag cgattcttgc tacaatcaaa
     4561 gctaaaaaat gcaagataca ctcaggcata aaagtaacaa aaaatttcaa aatataataa
     4621 agactaagat atattctatc actatttttc attaagtaag cctttggcaa gtttgaagat
     4681 atcttcttct tctatacgcg tgatacaaaa atcactttta tcgatatgct tggcattttg
     4741 gattttttta cctgcatcaa tgattttatt gatatgagtt tgaaaagcat tgcggtagct
     4801 tggtgttgca ccaaaaatcg taatagatgc cttatttaaa gcaaaagcca aatgtgttgg
     4861 gccgctatca tttcctatga ttaaattcat catttttgta aaagccatta gttcttcaag
     4921 attgaatttt ggcgctaatt ctatatgtgt ttcatcaata ccactaagat ttaaaacctc
     4981 tttagcaaat tcgtattctt ttacatttcc ccaagcgagc caaatttttg tttgttgaaa
     5041 ttcattgatt aaaagcttac aaagtatagc aagtttggtt ttaggataga ttttattttc
     5101 tacacttgag cccacatgta tgagtatgtt tttttcgttt ttgtcgagtt tgagtttatt
     5161 atttaagagt tgttttaaat tttcatctac gctaaaaata tcttgtttaa aggctaaatt
     5221 tttgacatta aaatcagtat ttaacataaa ggaggtaaga cttaagtatc ttacaaatac
     5281 attttcattg taatctaact caagtttttg gttgtagaaa ttatgagcaa aactttcttt
     5341 aagactattt ttatcaaaac caaaattatt tctacttaaa attcgactta caatagcaga
     5401 ttttatgagc ccttgtagat ctattactgc attatagttg ttttttcttg ctttaagaag
     5461 aatttttagg ctttttaaaa tttttttgtc ttttaagggc agggcataga gtttgtttat
     5521 taaaggatgg tttttaagta tgccttcaaa tttttcatct acaaaccaat gaatttctat
     5581 atctttttta aaatttttga taaattgcaa aaccacggca ctttgtataa tatcaccaag
     5641 tgctgacaaa cgaacaattg ctattttcat taaaagccta atattttaaa atttttgcta
     5701 tgattttagc gaaattattt aaaaaaaggt taaaaatggc aaaaaatgaa ggttatattt
     5761 gtgtttttga ttgtgagagt gtgccagatg ttgagcttat ccgcaaaact ttgggttttg
     5821 aaggaagtga tttagaggta agtttaaaag cacttcagtg gcaaaaagaa caaagtggga
     5881 gtgagttttt gcctttgcct tatcataaaa ttatcagtat ttgtgcggtt ttaagtgata
     5941 attttggaaa atttatcaaa gtgaataaaa ttgatggaca aaatgaaaaa gaaatgattg
     6001 ctaatttttt taattttata gaaaattatg agccaaaatt agtcagtttt aatggtaaaa
     6061 atttcgatat gcctgttctt gttttaaggg ctttaaaata caatttaaaa gcagcaactt
     6121 atttggatac tcaaagtgat aaatggaata attataaaac aagattttca gaattaaaac
     6181 attgtgattt attagaatcc ttaggatcta acgggcgtgg aataaagctt gatacacttt
     6241 gttctatggt gggtttgcca ggaaaatatg atgtgcatgg cgatgaggta atgaaacttt
     6301 tttatgaaaa taaacttgaa aaaatccacg aatattgtga aagtgatgtt ttaaacacct
     6361 atatgctttt tttaaaatat gaacttatta aagctaatgt tgatgaagaa gattatgttg
     6421 gttttctttc ttatatgaga gatttcttgt gtgcaaaaaa atcagatcgt tcttatacag
     6481 aagtttttgc aaaagcttgt gagagtgaaa tttcaaaagt tcgatcttaa gtatttaaga
     6541 aaatatatta aaatttattt ttgacatttt taaaaaaagg aatgatgatg aaaattctta
     6601 ttagcggtgg tgcaggttat ataggttctc atactttaag acaattttta aaaacagatc
     6661 atgaaatttg tgttttagat aatctttcta agggttctaa aatcgcaata gaagatttgc
     6721 aaaaaataag agcttttaaa ttttttgaac aagatttaag tgattttcaa ggcgtaaaag
     6781 cattgtttga gagagaaaaa tttgacgcta ttgtacattt tgcagcgagc attgaagttt
     6841 ttgaaagtat gcaaaatcct ttaaaatatt atatgaacaa cactgttaat acaacaaatc
     6901 tcatcgaaac ttgtttgcaa actggagtga ataaatttat attttcttca acggcggcca
     6961 cttatggcga accacaaact cccgttgtga gcgaaacaag tcctttagca cctattaatc
     7021 cttatgggcg tagtaagctt atgagtgaag aagttttgcg tgatgcaagt atggcaaatc
     7081 ctgaatttaa gcattgtatt ttaagatatt ttaatgttgc aggtgcttgt atggattata
     7141 ctttaggaca acgctatcca aaagcgactt tgcttataaa agttgcagct gaatgtgccg
     7201 caggaaaacg tgataaactt ttcatatttg gcgatgatta tgatacaaaa gatggtactt
     7261 gcataagaga ttttatccat gtagatgata tttcaagtgc acatttagcg gctttggatt
     7321 atttaaaaga gaatgaaagc aatgttttta atgtaggtta tggacatggt tttagcgtaa
     7381 aagaagtgat tgaagcgatg aaaaaagtta gtggagtgga ttttaaagta gaacttgccc
     7441 cacgccgtgc gggtgatcct agtgtattga tttctgatgc aagtaaaatc agaaatctta
     7501 cttcttggca gcctaaatat gatgatttag agcttatttg taaatctgct tttgattggg
     7561 aaaaacagtg ttaaaaaaac ttttttttat tttaagtaag gaagataaaa attttttatt
     7621 tttcttgctt gttttttcag tatttatttc ttttatagaa acttttgcaa tttctttggt
     7681 aatgcctttt atcactttgg ctagtgattt ttcttatttt gatcgtaata aatatttaat
     7741 cagcctaaaa gaatatctta atatccctgt ttttgaaatc attgtttatt ttggagtggg
     7801 gcttattgtt ttttatgtgt ttagagcttt gttaaatgcg tattattttc atcttttggc
     7861 aagattttct aaagggcgtt atcatgcgat cgcttataag gttttttcta aatttttaaa
     7921 tattaattat gaaaaattta ctcaaaaaaa tcaatctgaa attttaaagt ccattacagg
     7981 ggaagtttat aatctaagca ctatgatttc atcattttta cttttgatga gtgaaatttt
     8041 tgtagtactt ttgctttatg ctttaatgct tttgattaat tataaaatca ctttgttttt
     8101 aagtattttt atggtgttaa atgcctttat tttagtgaaa attttaagcc ctatcattaa
     8161 aaaagcagga gtaagacgcg aagaagcgat gaaaaatttc tttgaaattt taaatacaaa
     8221 tttaaataat ttcaaattta ttaagcttaa aaccaaagaa gatggagtat taagtctttt
     8281 taaagcgcaa agtgaagctt tttctaaagc aaatattacc aacgaaagcg tagctgcggt
     8341 gcctagaatt tatcttgaag gaataggctt ttgcgtactt gtttttatcg tggtattttt
     8401 ggttttgaaa aatgaaagtg atatttcagg tattttatcc acgatttcta tttttgtttt
     8461 agcgctttat cgcttaatgc caagtgcaaa tcgtattatt acaagttatc atgatttgct
     8521 ttattatcat tcttctttgg atattattta tcaaaattta agacaagaag aagaaaattt
     8581 gggcgaggaa aaattaagct ttaatcaaga gcttaaaatt tgcaatctta gctttggtta
     8641 tgagggaaaa aaatatttat ttaaaaatct taacttaaat attaaaaaag gcgaaaaaat
     8701 cgcttttata ggggagagtg gttgtggaaa aagtacctta gtagatctta tcataggact
     8761 tttaaaacca aaagaagggc aaattttaat tgatgagcaa gaattaaatg caaataatac
     8821 aaaaaattat cgccaaaaaa taggctatat cccgcaaaat atctatcttt ttaatgacag
     8881 tatagctaaa aatatcactt ttggagatgc ggttgatgaa gaaaaactta atagggttat
     8941 caaacaagca aatttagagc attttataaa aaatttacct caaggagtgc aaacaaaagt
     9001 gggcgatggg gggagtaatt taagcggggg acaaaaacaa cgcatagcta tagcaagagc
     9061 tttatattta gagcctgaaa tgttagtgct tgatgaagca acttctgcgc ttgatactca
     9121 aagtgaagca aaaattatgg atgaaattta taaaatttct aaagataaaa ccatgattat
     9181 tatcgcacat cgcctttcta cgataacaca atgtgataag gtttatcgtt tagaacacgg
     9241 taagcttaaa gaggagaaat gatgaaaata agctttatta tcgcaacttt aaattcagga
     9301 ggtgctgagc gtgctttagt aaccttagct aatgcacttt gcaaagagca tgaagtaagt
     9361 attattaaat ttcatgcagg agaatctttt tataagcttg aaaatgaagt taaagttaca
     9421 agtttggaac aatttagatt tgacacgctt tatcataaaa tcgcaagtcg ttttaagaaa
     9481 ttttttgctt taagaaaggc tttgaaagaa agtaagtctg atgtttttat ttcttttttg
     9541 gatacgacta atattgcttg tattgctgcg aaaatagggc ttaaaactcc actcattata
     9601 agtgagcata gcaatgaagc gtatttaaaa cctaaaattt ggcgtttttt aagaagggta
     9661 agctatcctt tttgtgatgc tttaagtgtg cttggaagca gtgataaggt gtattatgaa
     9721 agatttgtaa aaagggttaa gcttttatta aacccttgtc attttagcga tgaaatttct
     9781 tttgattcta gttttgaaaa ggaaaatttg gttcttttta tagggcgttt agatcacaac
     9841 aaaaaccctg taatgttttt aaaagctata gcgcatttgg ataaaaattt acaagaaaat
     9901 tataaatttg ttatagcagg agatggacag ttaagacaag aacttgaata taaggtaaaa
     9961 tctttaggaa taaaagttga ttttttagga cgcgttgaaa atgtcaaggc tctttatgaa
    10021 aaagcaaaag tgctttgcct ttgttctttt gtagagggtt tgccaacggt tttaattgaa
    10081 agtttgtatt ttgaggtttg tagaatttca agttcttatt ataatggtgc taaggattta
    10141 atcaaagata atcatgatgg gcttttggta ggttgtgatg atgaaatagc acttgctaaa
    10201 aaacttgaac ttgttttaaa tgatgaaaat tttagaaaag aacttgtaaa taatgccaaa
    10261 caaaggtgta aagactttga aatttctcat atcaaagaag aatggcttaa gcttatagcc
    10321 gaggttaaaa atgcctaaac tttctgttat agtaccaact tttaatcgtc aagttttgtt
    10381 agaaaaggct attaaaagca tacaaaatca agattttaaa gatttagaaa ttattgtaag
    10441 cgatgataat tctagcgatg atactaaaag tgtggtgcaa aatttacaaa aagatgatga
    10501 tcgcattaag tattttttaa atcaaaatta caaacaaggt ccaaatggca ataaaaacaa
    10561 tggcttagat caagcaagtg gcgagtttgt aactttttta gatgatgatg atgagctttt
    10621 atccggggct ttaagtacct tgatgcaaaa agcaaatgag ggttatgctc atgtttttgg
    10681 aaattgtttg atagaaaaag aaggaaattt aagcaaggaa tttagcggca agggcttgga
    10741 aaaagatagt gaaatttcta aaaaagattt tttaatggct aaatttagcg gagagttttt
    10801 ttctgttttt aaaaaatccc tacttgaaaa taagcgtttt aatgaagaat tttatggcaa
    10861 tgaagccacg ctttgggtaa atttatacaa agaaaaaagt ttttatatcc ataaggcttt
    10921 taggatttat agaattttta ggcaagatag cgtgacttta ggggcgagta aaaatgctta
    10981 tagggtgtat ttgggatatt tagagcttgc taaaatttta gaaaatgaac ttagaatgag
    11041 taaggataaa gattataaaa aaacttgtgc gagttattat aaaatggcag cttattatgc
    11101 aaaacttgca aaaaattata aagcccttta taaatgtttg tttaaaagcc taagtataaa
    11161 aatcaacgct cctgctttga tattactcat tttaagtata attccaaata atatgattga
    11221 aaaattatca aaaattcggg tggctttatg caaaaattag gcatttttat ttattcttta
    11281 ggaagtggtg gtgctgaaag agttgtggcg actttattgc ctattttaag tttgaaattt
    11341 gaagtgcatt tgatcttgat gaatgataaa atttcttatg aaattccaga gtgtcaaatt
    11401 cattttttag aatgttcaaa acctagtgaa aatcctattt tgaaattttt aaaactacct
    11461 tttttggctt taaaatacaa aaaactttgc agaaatttag gtattgatac agaatttgtt
    11521 tttttaaatc gacctaatta tatagcttta atggcaagaa tgtttggaaa caaaactcgc
    11581 cttgtgatca atgaatgcac tacgccaagt gtgatgtata tgaaaaataa ttttaattct
    11641 ttggtaaata aatttttaat ttctttgctt tacccaaaag ctgatttaat cttgcctaat
    11701 tctaagggaa atttagaaga tttagtgcaa aattttagta taagtccaaa aaaatgtgaa
    11761 attttataca atgccatcga tttagaaaac atagggcaaa aagcccttga agacatagct
    11821 ttaaaagata aatttatttt aagtgtaggc aggcttgata aaggtaaaaa tcatgcttta
    11881 ttaattcgtg cttatgcgag attgaaaaca gatttaaagc ttgtgatttt aggtgaaggt
    11941 gtgcttaagg atgagctttt agctttgatt aaagaattaa atttggaaga aaaggttttg
    12001 cttttaggat ttgataataa tccttataaa tacatggcta aatgcgaatt ttttgctttt
    12061 gcttctgtgt ttgaaggttt ttcaaatgtt ttaatcgaaa gtttggcttg ttcttgtgcg
    12121 gtggtttgca ctgatcataa aagtggtgca agagagcttt ttggcgatga tgaatttgga
    12181 cttttagtag aagtagataa tgaaaactct atgtttcagg gtttaaaaac tatgcttgaa
    12241 gacgataaat taagaaaagc gtataaaaac aaagctaaaa ctagggctaa agcctttgat
    12301 aaagtaaaaa ttgcacgcga tgctttgaaa tatttattag gataaaagat gttgaaaaaa
    12361 gagtatttaa aaaaccctta tttagttttg tttgcgatga ttgtattagc ttatgttttt
    12421 agtgtatttt gcaggtttta ttgggtttgg tgggcaagtg agtttaacga gtattttttc
    12481 aataatcaat taatgatcat ttcaaacgat ggctatgctt ttgctgaggg cgcaagagat
    12541 atgatagcag gttttcatca gcctaatgat ttgagttatt atggatcttc tttatctacg
    12601 cttacttatt ggctttataa aatcacacct ttttcttttg aaagtatcat tttatatatg
    12661 agtacttttt tatcttcttt ggtggtgatt cctattattt tactagctaa tgaatacaaa
    12721 cgccctttaa tgggctttgt agctgctctt ttagcaagtg tagcaaacag ttattataat
    12781 cgcactatga gtgggtatta tgatacggat atgctggtaa ttgttttacc tatgtttatt
    12841 ttatttttta tggtaagaat gattttaaaa aaagactttt tttcattgat tgccttgcca
    12901 ttatttatag gaatttatct ttggtggtat ccttcaagtt atactttaaa tgtagcttta
    12961 attggacttt ttttaattta tacacttatt tttcatagaa aagaaaagat tttttatata
    13021 gctgtgattt tgtcttctct tactctttca aatatagcat ggttttatca aagtgccatt
    13081 atagtaatac tttttgcttt atttgcttta gagcaaaaac gcttaaattt tatgattata
    13141 ggaattttag gtagtgcaac tttgatattt ttgattttaa gtggtggggt tgatcccata
    13201 ctttatcagc ttaaatttta tatttttaga agcgatgaaa gtgcgaattt aacacagggc
    13261 tttatgtatt ttaatgttaa tcaaaccata caagaagttg aaaatgtaga ttttagcgaa
    13321 tttatgcgaa gaattagtgg tagtgaaatt gttttcttgt tttctttgtt tggttttgta
    13381 tggcttttga gaaaacataa aagtatgatt atggctttac ctatattggt gcttgggttt
    13441 ttagccttaa aaggaggact tagatttacc atttattctg tacctgtaat ggctttagga
    13501 tttggttttt tattgagcga gtttaaggct atattggtta aaaaatatag ccaattaact
    13561 tcaaatgttt gtattgtttt tgcaactatt ttgactttgg ctccagtatt tatccatatt
    13621 tacaactata aagcgccaac agttttttct caaaatgaag catcattatt aaatcaatta
    13681 aaaaatatag ccaatagaga agattatgtg gtaacttggt gggattatgg ttatcctgtg
    13741 cgttattata gcgatgtgaa aactttagta gatggtggaa agcatttagg taaggataat
    13801 tttttccctt ctttttcttt aagtaaagat gaacaagctg cagctaatat ggcaagactt
    13861 agtgtagaat atacagaaaa aagcttttat gctccgcaaa atgatatttt aaaatcagac
    13921 attttacaag ccatgatgaa agattataat caaagcaatg tggatttatt tctagcttca
    13981 ttatcaaaac ctgattttaa aatcgataca ccaaaaactc gtgatattta tctttatatg
    14041 cccgctagaa tgtctttgat tttttctacg gtggctagtt tttcttttat taatttagat
    14101 acaggagttt tggataaacc ttttaccttt agcacagctt atccacttga tgttaaaaat
    14161 ggagaaattt atcttagcaa cggagtggtt ttaagcgatg attttagaag ttttaaaata
    14221 ggtgataatg tggtttctgt aaatagtatc gtagagatta attctattaa acaaggtgaa
    14281 tacaaaatca ctccaatcga tgataaggct cagttttata ttttttattt aaaggatagt
    14341 gctattcctt acgcacaatt tattttaatg gataaaacca tgtttaatag tgcttatgtg
    14401 caaatgtttt ttttgggaaa ttatgataag aatttatttg acttggtgat taattctaga
    14461 gatgctaaag tttttaaact taaaatttaa gggttgaaaa tgagaatagg atttttatca
    14521 catgcaggag cgagtattta tcattttaga atgcctatta taaaagcgtt aaaagataga
    14581 aaagacgaag tttttgttat agtgccgcaa gatgaataca cgcaaaaact tagagatctt
    14641 ggcttaaaag taattgttta tgagttttca agagctagtt taaatccttt tgtggtttta
    14701 aagaattttt tttatcttgc taaggttttg aaaaatttaa atcttgattt tattcaaagt
    14761 gcggcacaca aaagcaatac ttttggaatt ttagcagcaa aatgggcaaa aattccttat
    14821 cgttttgcct tagtagaagg cttgggatct ttttatatag atcaaggttt taaggcaaat
    14881 ttagtgcgtt ttgttattaa tagtctttat aaattaagtt ttaaatttgc acaccaattt
    14941 atttttgtca atgaaagtaa tgctgagttt atgcggaatt taggacttaa agaaaataaa
    15001 atttgcgtga taaaatctgt agggatcaat ttaaaaaaat tttttcctat ttatgtagaa
    15061 tcggaaaaaa aagagctttt ttggaaaaat ttaaacatag ataaaaaacc cattgtgctt
    15121 atgatagcaa gagctttatg gcataagggt gtaaaagaat tttatgaaag tgctactatg
    15181 ctaaaagaca aagcaaattt tgttttagtt ggtggaagag atgaaaatcc ttcttgtgca
    15241 agtttggagt ttttaaactc tggcgcggtg cattatttgg gtgctagaag tgatatagtc
    15301 gagcttttgc aaaattgtga tatttttgtt ttgccaagct ataaagaagg ctttcctgta
    15361 agtgttttgg aggcaaaagc ttgcggtaag gctatagtgg tgagtgattg tgaaggttgt
    15421 gtggaggcta tttctaatgc ttatgatgga ctttgggcaa aaacaaaaaa tgctaaagat
    15481 ttaagcgaaa aaatttcact tttattagaa gatgaaaaat taagattaaa tttagctaaa
    15541 aatgccgccc aagatgcttt acaatacgat gaaaatataa tcgcacagcg ttatttaaaa
    15601 ctttatgata gggtaattaa gaatgtatga aaaagttttt aaaagaattt ttgattttat
    15661 tttagcttta gtgcttttag tgcttttttc tccggtgatt ttaatcactg ctttactttt
    15721 aaaaatcact caaggaagtg tgatttttac ccaaaatcgt cccgggttag atgaaaaaat
    15781 ttttaaaatt tataaattta aaaccatgag cgatgaaaga gatgaaaagg gtgagttatt
    15841 aagcgatgaa ttgcgtttga aagcttttgg aaaaatcgtt agaagcttaa gtttggatga
    15901 gcttttgcaa ctttttaatg ttttaaaagg ggatatgagt tttgttggac ctagacctct
    15961 tttggttgag tatttgcctc tttacaataa agagcaaaaa ttgcgtcata aagtgcgtcc
    16021 aggtataaca ggatgggcgc aggtaaatgg tagaaatgct atttcttggc agaaaaaatt
    16081 cgaacttgat gtgtattatg tgaaaaatat ttcttttttg cttgatttaa aaatcatgtt
    16141 tttaacagct ttaaaggttt taaaacgaag tggggtaagc aaagaaggcc atgttacaac
    16201 agagaaattt aatggcaaga actgaaaaaa tttatattta tggtgctagt ggtcatgggc
    16261 ttgtttgtga agatgtggct aaaaatatgg gttataaaga atgtattttt ttagatgatt
    16321 ttaaaggaat gaaatttgaa agtaccttac ctaaatatga tttttttata gccataggaa
    16381 acaatgaaat tcgaaaaaag atttatcaaa aaatttcaga aaatggcttt aaaattgtca
    16441 atcttatcca taaaagcgcg cttataagtc ctagcgcaat cgtggaagaa aatgcaggaa
    16501 ttttaatcat gccttatgta gtgattaacg ctaaagctaa aatagaaaaa ggtgtgattt
    16561 taaatacttc aagcgtaatt gagcatgaat gtgtgatagg ggaattttct catgtgagtg
    16621 tgggagctaa atgtgcgggt aatgtaaaaa ttggtaaaaa ttgtttttta gggattaatt
    16681 cttgtgtttt gcctaattta agtttggcag atgatagtat tttaggtggt ggagcaactt
    16741 tagttaaaaa tcaagatgaa aaaggtgttt ttgtgggagt acctgcaaaa aggatgtaaa
    16801 ttgcatttta ataacaatct tgttgttcac tatatagtaa atccttcgcc tttggggtgg
    16861 attgtcatta atttactaac catatgtcta atatgctaca tatttccttt gaaaaattct
    16921 ttaaaacaca aaaaactttt tagtcttaaa gcaaatgtaa attctaaaaa tagtaggatt
    16981 ataaaatata caggtattgc tgcttttttg ggtggattaa taggaatttg gtataatttt
    17041 gaaggttttt atcaacttct ttttttcttt gaattagaaa atgaaaattt aaaaacactt
    17101 tggagtttgc aagtatcagt ttcttctgtg ataacaggta tgttattatt gttgatatat
    17161 gttataaatt tagcaatggt ttgtgaaaat ggaatttata tagttagtaa atttaatctt
    17221 ttttatatgt attttataaa acgagaagat ttggaaattg ttaaaataga aaaaatgaaa
    17281 tttttaaatc aagttgaagt ttgttttgtt atcaaaacaa aaaatgaaat actccttaaa
    17341 tgctttgaaa gtatttataa aaaagaagac ttagaaaagc ttaaaaattg gtatgaaaac
    17401 aagctttgac tataaaaaga atttaaatat ttgaatcttt gtaaattttt ttaggtaaaa
    17461 tagagtcaat ttataaaaat tttgttttac acaaaggata aatcatgaga ttttttcttt
    17521 ctcctccgca tatgggtggt aatgaattaa aatacataga agaagttttc aaaagcaatt
    17581 atatagcacc tttgggtgaa tttgtaaatc gctttgaaca aagtgtcaag gcttacagta
    17641 aaagtgaaaa tgccttagct ttaaattcag ccacagcggc tttgcattta gctttaaggg
    17701 tggcaggggt aaaacaagat gatattgttt tggcttcttc ttttactttt atcgcttcag
    17761 tagcacctat ttgttatctt aaagcaaaac ctgtatttat agattgtgat gaaacttata
    17821 atatcgatgt agatttatta aagcttgcta ttaaagaatg tgaaaaaaaa ccaaaagcat
    17881 tgattttaac tcatctttat ggcaatgcgg ctaaaatgga tgaaattgtt gaaatttgca
    17941 aagaaaatga aattgtttta atcgaagatg ctgctgaagc tttaggaagt ttttataaga
    18001 ataaagcttt aggaactttt ggagaatttg gagcttattc ttataatggc aataaaatta
    18061 tcaccacttc aggtggaggt atgcttatag gaaaaaataa agaaaagatt gaaaaagcaa
    18121 gattttatag cactcaagct agggaaaatt gtttgcatta tgaacattta gattatggtt
    18181 ataattaccg cttaagcaat gttttaggag ctattggcgt agcgcaaatg gaggttttag
    18241 aacaaagagt gcttaaaaaa agagaaattt atgagtggta taaagaattt ttaggagagt
    18301 gttttagctt tttagatgaa ttagaaaatt caagaagcaa tcgctggtta agtacagctt
    18361 tgattgattt tgataaaaat gaacttaatt cttgtcaaaa agatataaat atcagtcaaa
    18421 aaaatattac tttgcatcca aaaatttcaa aactcataga agatttgaaa aatgaacaaa
    18481 tagaaacaag accattatgg aaagctatgc acgctcaaga agtatttaaa ggagctaagg
    18541 cttatcttaa tggcaatagt gagttatttt tccaaaaagg aatttgtttg ccaagtggca
    18601 cggcgatgag taaagatgat gtttatgaaa tttcaaaact gatcttaaag agcataaagg
    18661 cttaaaatga ttttttataa aagcaaaaga ttagcatttt ttttaacttc agatattgtt
    18721 ttaattttac ttagcgttta tctggctttt tctttgagat ttagtggaga tattccgagt
    18781 attttttatc atggtatgat ggtttctgct attattttgc ttgttttaaa actttcattt
    18841 ttgtttgttt ttagaattta taaagtagct tggagatttt tttctctcaa tgaagcaaga
    18901 aagattttta tcgctttgct tttagctgag ttttgttttt ttcttatttt ttattttttt
    18961 agtgattttt ttaatccttt tccaagaagt gctattgtga tagattttgt tctttcttat
    19021 atgtttatag gtactttaag aattagcaaa agaatgcttg tggattttaa accttctaga
    19081 atgaaagaag aagaaactcc ttgtattgta gtaggggcaa cttctaaggc tttgcatttg
    19141 ttaaaaggtg caaaagaagg ttctttaggg ctttttcctg taggcgtagt tgatgcgaga
    19201 aaagagctta tagggactta ttgtgataaa tttattgtag aagaaaaaga aaaaataaaa
    19261 tcttatgtag aacaaggggt aaaaactgcc attattgctt taagacttga acaagaagag
    19321 cttaaaaaac tttttgaaga acttgtagct tatggtattt gcgatgtaaa aatattttct
    19381 tttacaagaa acgaagcaag agatatcagt atagaagact tgcttgctag aaaaccaaaa
    19441 gatttagatg atagtgctgt ggcggctttt ttaaaagata aggtagtttt ggtaagtgga
    19501 gcaggtggaa ctataggcag tgaactttgt aagcaatgta ttaaatttgg tgctaagcat
    19561 cttatcatgg ttgatcatag tgagtataat ctttataaga tcaatgatga tttaaattta
    19621 tataaagaaa aaattactcc tattttactg agtattttag ataagcaaag tttagatgag
    19681 gtattaaaaa cttataaacc cgagcttatt ttacatgcag ccgcttataa acatgtgcct
    19741 ctttgcgaac aaaatccaca ttcagcagta atcaataata ttttaggaac taaaatttta
    19801 tgcgacagtg ctaaagaaaa caaagtagct aaatttgtga tgataagtac agataaagca
    19861 gtacgaccaa caaatattat gggttgcact aagagagttt gcgagcttta tactttaagt
    19921 atgagtgatg aaaattttga agttgcttgt gtgcgttttg gtaatgtttt aggttctagt
    19981 ggtagtgtga taccgaaatt taaagcacaa attgccaata atgagccttt aactttaacg
    20041 caccctgata tagtgcgtta ttttatgctt gtggctgagg cagtgcaact tgttttacaa
    20101 gctggagcta tcgcaaaagg gggagaactt tttgttttgg atatgggtaa gcctgtgaaa
    20161 atcatagatt tagctaaaaa aatgctttta ctttctaatc gcaatgattt agaaattaaa
    20221 atcacaggct taagaaaagg tgagaagctt tatgaagagc ttttgattga tgaaaatgat
    20281 gctaaaacac aatatgagag tatttttgta gcaaagaatg agaaggttga tcttgattgg
    20341 cttaataaag agatagaaaa tttacaaata tgtgaagata tttcagaggc tttattaaag
    20401 attgtacctg aatttaaaca caataaagaa ggtgtataat gtatataaaa gatatacaaa
    20461 gatttgaaga taatcgctat cgtgctagag cttatatgag ttatatttta acaagaaatc
    20521 tgcccaataa acttcctgat attcaccttg aaacgattaa aacagctttg gataaaatag
    20581 ctcatgaagt tgttgttttt gatgctttgt atattttaga tatttcaggc atgcaaatag
    20641 aaaatgcgat ttccttaaat aaagctcatg aaatagggca gggtgaggat agaagtactc
    20701 gttcttattt ttatagagct gtaaaattaa gacgatgtgt tttgagcgat ccttatcctt
    20761 cggttttaaa taatgagctt tgcgtgacag cttctatgcc aatttacgat gataaaaata
    20821 acttgctttt tgttgtttgt attgatatca agcttgaaga tattttaaag attattcaag
    20881 caggaaaatt tgaatttgtt tttactcagt ttagtcgttt ggtatatttt tgcttcgcac
    20941 tggttttatt tgtgattact tgttttttat ttcaaaaagg tttttttagt ctttttgata
    21001 atcaagctat aggtatagaa catatgtttg aaagtaccat cgctataact ttggctttag
    21061 ctatttttga tttggcaaaa actttgatcg aacaagaagt attaggaagg acgaaaaaag
    21121 aagaaggtgg aattcaaaaa actatggtga gatttttggg ttctattatc attgctttag
    21181 ctatagaagc tttgatgttg gtatttaaac ttgctattgg tgatctttct cagatgattt
    21241 atgcgattta tcttatcggt ggagtgagct tgcttctttt aggtttaagt gtatatttat
    21301 ttacggttaa gtataaaaat aataatattt gagtaaaaat ttaagtaaaa gatgatataa
    21361 tgctgttttt taaaattttt tagcttgatt aataaggcta aaaagggtaa aataaaacta
    21421 taaaaacttt gaaaggacga aattgtgaaa ttgttagttg ttgatgacag ttctactatg
    21481 agaaggatta ttaaaaatac cctaacaaga cttggacacg atgatgtttt agaagctgag
    21541 catggcgttg aagcttggga tttattaact aaaaatgaag atgtaaaagt tttaattaca
    21601 gattggaata tgccagaaat gaatggcttg gagttggtaa aaaaagtaag agcagagaaa
    21661 aaatatgaag atatgcctat catcatggtt acaactgagg gcggaaaagc tgaagtgatt
    21721 actgctttaa aagctggcgt aaataactat attgtaaaac cttttactcc acaagtttta
    21781 aaggaaaaac ttgaagatgt tttaggaaca ggaagtggag aaggtgcagc tgagtaaagg
    21841 ctgattttta aaattctaaa tgcaaaaaaa atattatgaa ttgttcttta tcgtagaaga
    21901 gcagtataaa aatttatttc ttgattttgc ttttgattta ggtatagaag ccatagaaga
    21961 gaaagataat ggtgtttaca ttagatccca tgagagttta gaagagtttt catgggcact
    22021 tgaaatattt gctcaaaaac ttacaactac tttcaattta aaccataaaa ttatttctaa
    22081 tttaagtctt gtagagaaag aaaacaagga ctggatacaa gaatataaaa aaggcataaa
    22141 acctatctta gtggataatg tttacatcca tacaacttgg caagaagaaa agaagaattg
    22201 tataaatata aagattaatc cagccttagc ctttggctca ggacatcacg aaagcacata
    22261 ttcttgtgta aaatttttac aaaaattttc taaaagtaaa ttaagagctt tagatcttgg
    22321 ttgtggtagt ggaattttgg gtattattat ggcaaagttt ggttgtaatg ttgaaatttg
    22381 tgatactgat gagttggcta ttgatagttc tttagaaaat gcaagattaa atggtgtcga
    22441 ttttcacaag gcttggtgtg gatctataga taaagcaaat ggtttatata atctaattgt
    22501 tgcaaatatc attgcagatg tgattttaat tttagaaaaa gatattaaaa accatttaga
    22561 agataatgct atacttattt tgtcaggaat tttagataaa tattcaacaa gaattaaaga
    22621 aaaatttcaa gatttggaac tcattgatga aatgcaaatc aatgagtggt gtagttttgt
    22681 atataaaaat aataaaaaag gataagtaat gaataataat acccaaaata ataagggtaa
    22741 tccgcagggt aataattttt ttaacaaaaa tcccattttt atttttgcga tttttgcaat
    22801 tataatgata attattttta agggattttt tgatggcaat ggttcttttg gcggggcatt
    22861 gaatggcaat gaagtaaata aaaatgtccc ttattctgag ttaaaaaagc ttattgaaag
    22921 tggacaaatc aatcaagtta gtataggaca aacaacaatc aaagcgattt caagctctca
    22981 caatactgtt tatacagcaa aaaaagttaa tgatcctgag cttgtgagtt tactagatag
    23041 taaaaatatc gcttatggtg cgtattctga aacaaattgg tttacggata tacttttttc
    23101 atgggttttg ccagtattta ttttctttgg tatttggatg tttttggcaa gtcgtatgca
    23161 aaaaaatatg ggaagttcta tattgggtat aggaagttct aagaagcttg taaattcaga
    23221 aaaacctaaa gtaaaattta gcgatgtagc tggtgttgaa gaagctaaag aagaagtaaa
    23281 agaaattgta gattttttaa agtatcctga aagatatatt aaattgggag ctaaaattcc
    23341 aaaagggctt ttacttgttg ggcctccagg tacaggaaaa actttgcttg caaaagcagt
    23401 tgcaggtgaa gctgatgtgc cgttttttag tgtttcaggt tcgtctttta tagaaatgtt
    23461 tgtgggtgta ggtgcttctc gtgtgagaga tttatttgaa aatgcaaaaa aagaagctcc
    23521 tgctattgtt tttatagatg aaatagatgc tattggtaaa agtcgtgcag caagtggcat
    23581 gatgggtgga aacgatgaaa gagagcaaac tttaaatcag cttttggctg aaatggatgg
    23641 ctttgggaca gaaagttccc cagtcattgt tttagcagca acaaatcgcc cagaagtttt
    23701 agatgcagcg cttttaagac caggaaggtt tgatagacaa gttttagttg ataaacctga
    23761 ttttaaaggt aggtgtgata ttttaaaagt gcacatgaaa gatgtcaaaa tctccccaaa
    23821 agttaaagta gaagatatag cacgcttaac cgcagggctt gcaggagctg atcttgcaaa
    23881 tattattaat gaagcagcgc ttttagcggg tagggattct aaaaaatatg tagaacaaaa
    23941 tgatttagtt gaagctgttg aaagagctat agcagggctt gagaagaaat cacgtcgtat
    24001 taatgaaaaa gaaaagaaaa ttgttactta tcatgaatgc ggtcatgctt tgattgctga
    24061 aactaccaaa ggcgcaaaac gtgtaagtaa ggtttctgtg attccgcgtg gtcttgcggc
    24121 tttaggttat actttaaata ctcctgagga aaataaattt ttaatgcaaa aacatgaact
    24181 tatcgctgaa gtagatgtac ttttgggtgg tcgtgcagct gaagaagtgt ttataggtga
    24241 aatttcaacg ggtgcaagta atgatttaga aagagcaacc gatatcataa aagctatgat
    24301 ttctatgtat ggtatgagtg aaattgcagg acttatggta cttgaaaaac aaagaaatac
    24361 tttcttaagt ggtggacaaa ctatcaaaga ttattctgaa aagatggcag aatctttaga
    24421 tgattatgta aagaaaacct tggatgaacg ctataaagat gttaaagata ctttaaatac
    24481 ttataaggga gcgattgaga ctatggttgc agccctttat gaagaagaaa ctattgaagg
    24541 taataaagtg cgcgagatta ttaaagagtt tgaggatcaa aatagtctac caactcgttt
    24601 acaagaactc gaagaagtta aaactgaagt taaagtagaa gaatgaaaga ttttattgca
    24661 aaatatggat atttaagtct tattatttta agcttaattt ttatttttgt gtggattttt
    24721 tattcttttt ccatcttgct attagcatta attgtaattt gtatttttct ttttagagcg
    24781 cccaaaagag aacttgtttg tagtgatgaa aaagctattt ttgcacctat ggatggtagg
    24841 gttactaaaa tagaaaatat tcatcataaa gatttgggtg aatgtgttga aattgctatt
    24901 aaaaatgctc tttatgatgc tgggaatttt aatacacctt ttgcaatgtc tataatagat
    24961 attcgtttac gacatgggct ttttttgtgc agtgaattaa aatctgcaaa aatgatgaat
    25021 gaaagagctt ttattttggc aaaagttaaa gagaataaaa cgatagcctt gcgaatctat
    25081 gcaggttctt ttgatagaaa attaaagctt gataatattt ctcatgattt aaaagcagga
    25141 gatagaatgg gttttttaat taatggctct ataagtttac ttttaccaaa agatactaga
    25201 attcatatag gcttaaatga tgaaattaaa gcaggttcat tgctaggcta ttttgcgtaa
    25261 ggaaaaataa tgaataacag accgcaacta atttatattt tacccaatct ttttacagct
    25321 gcttcagctt ttttaggggt tatttctatt atagcttcaa tacatggaaa ttattataca
    25381 gctttgattt atattatttt atctttgatt tgcgatgggc ttgatggccg tgttgcaaga
    25441 cttacaaatt ctacttcaaa atttggagta gaatttgatt ctttggctga tctagtagct
    25501 tttggagttg ctccagcggt tcttttttat atggctatag gttatgattt tggaaaactt
    25561 ggatctttga ttacagcttt ttttgtggtt tttggagcta ttcgtttggc gagatttaat
    25621 gttaccacag gcacttatga accctccgtt tttataggtc ttcctatacc tactgcagca
    25681 gttgtgagta ctatatggac ttatgcgttt atcagttatg attttttaaa gccttatggc
    25741 gtagtttttt tggtgcttca agcaatttta gggcttttaa tggtaagtaa tatacgttat
    25801 cctagtttta aaaagcttga ttttaatcgt tctagtgttt taaaagtttt gattatttta
    25861 attataatat tttcattttt atatctttac cctcttgaaa gtttagtaat tttagcaagc
    25921 ttgtatgtgc tttatggaat tattcgggtt ttatatacca ttatcgtttc aaaatttaag
    25981 ataagaaatc aagagtaaaa tttttcaatg acttcgcatt cttcttgagt gaagccagct
    26041 ttgattcttg cttgaatgtt aagttttttt cccgcaagag agaattgttt aaacgttttg
    26101 caaagctcaa taaaatcata cctgttttga tttgcaaatt tccaccaagt atctcctttt
    26161 ttaacgtgtt ttatttcatc attaagtata atttcaagat attccattag aagattttta
    26221 atggaatgat tggaactttg aagtttttga acaacaaagg ggttggcatc aagcccttta
    26281 gcttctaaac ctctatgaac tactcccatt ctaaagctta aagagtcttt tgtagcttct
    26341 agagcagatt ctaaattatc atgcactgga aaatttccat atttgtaacc aagttcttta
    26401 agtactgaat ttaaaagttt gaaatgttta atttcctcat ctgctacctc cagccaatcg
    26461 taataaaatt gcaaaggtag atttttaaag cgataactcg catctaaagc caggttaatt
    26521 gcattaaatt ctatatgagc gactgaatga attattttag caagcgcatg agttgaattg
    26581 acaaatttag gccttcttat acgcgtagga tgaagcaagg taatttgttg tgatgtattt
    26641 tttttgaaaa tgctttgatg ctcgtgatta aaattaaatt tgtggctttt aaagtcttca
    26701 taaaaatttt gaaaagagtg aaa
//
LOCUS       DAPIYB010000012        26156 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.012, whole genome shotgun sequence.
ACCESSION   DAPIYB010000012 DAPIYB010000000
VERSION     DAPIYB010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26156
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.012"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            8..1009
                     /gene="mltG"
                     /locus_tag="RJ318_000395"
     CDS             8..1009
                     /gene="mltG"
                     /locus_tag="RJ318_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HDV7430293.1"
                     /translation="MTIPFLSTINKANISTTKNTTIYKIFFFIRNFFLIFILGIFYYL
                     TQPLKSNSVVFIPQGSISQIITYLKQNKYQMSNIDKYILFFLGHPQSGWINIGTKDLN
                     RAEFLHKLTIAKAALQTITLIPGETSVIFLEQAAKQLGLDKDILLKEFQAQAPYDEGV
                     FLPETYKIPKGITENLLIQMLLNHAEISNKKTSEKIFGDYNPKKWHQYIIIASVIQKE
                     AANDNEMPIVASVIYNRLKKGMKLQMDGTLNYGIYSHVKVTPQRIRQDNSFYNTYKFT
                     GLPKEAVCNVSLAAIRAAIFPLKTDYLYFVRDKNTGVHIFSTNIDDHNKAINLQKGK"
     gene            1089..1520
                     /gene="flgB"
                     /locus_tag="RJ318_000396"
     CDS             1089..1520
                     /gene="flgB"
                     /locus_tag="RJ318_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HDV7430294.1"
                     /translation="MINPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIEF
                     ETALVNRANEIFKKNDKKELELAVTEEGHQKPWKFPDPSKSTIYLRDGHLARNDANTV
                     DLDVETTEMSKNTVMITALDGVLRRQSNIFSSILDASSKLS"
     gene            1530..2024
                     /gene="flgC"
                     /locus_tag="RJ318_000397"
     CDS             1530..2024
                     /gene="flgC"
                     /locus_tag="RJ318_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HDV7430295.1"
                     /translation="MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRR
                     REVIFKATDFDKLLNEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKD
                     FRMKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAID
                     LLRG"
     gene            2031..2327
                     /gene="fliE"
                     /locus_tag="RJ318_000398"
     CDS             2031..2327
                     /gene="fliE"
                     /locus_tag="RJ318_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HDV7430296.1"
                     /translation="MNNINDLRLNNNISNTNKSQNSTGIGDEFAKMLKNEIDDLNKAQ
                     ESGEAAMTDIATGQVKDLHQAAIAITKAESSMKFMLEVRNKAISAYKEITRTQI"
     gene            2334..4124
                     /locus_tag="RJ318_000399"
     CDS             2334..4124
                     /locus_tag="RJ318_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDV7430297.1"
                     /translation="MQEYKKNRVSKVAFAYCMALLFMIIFISSTFFLTSKRHIPNTEK
                     DQYALALRGSIITKDNFTITSSKQIYRAEIDLRSINKDKFDLFLKLFQIYSGISNDQV
                     ADIKKRMQNQKKRSYNFVLLQNLDSKQASYLKDLAKKLYIQGFFKAFTNNSGRVETRG
                     LNIIEHEEDRIYMSKDSFTPIIGYTKMILDPESGILKNIGVKGLEKYYDACLSPVQNE
                     KIQGLKDIGGNIILNLNSLQQKKINGCDLYLNLSLKLQKSIEKAIDQRNEDLKANEII
                     VGVMESKTGRILALASSRRYDPQNRGKDLSVLNASAIEYGYEAGSVIKPFIFTTALRL
                     GKIKMDEVINTYGGSYKLGRFTIKDDHKMDKMTMEEVIRYSSNIGMIQIAKRLNNIEI
                     VSGLKIFKFGEKSGIDLPYEQKGEIPNPKRLRDIEKSVLSYGYGLKTTFIQLLAAYNV
                     FNNDGFYITPRLAEKFYQNGRFTNLDDDVKKEKILSSEAAKTMQNVLINVIEKGTGKK
                     AITQGIIAGGKTGTARIAERQGYTSNRYNASFFGFANDLNHAYTIGVLVRHPTKPYSY
                     YAAQSALPMFKDVVDILINEEFLTPIQDNN"
     gene            complement(4139..5908)
                     /locus_tag="RJ318_000400"
     CDS             complement(4139..5908)
                     /locus_tag="RJ318_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi symporter"
                     /protein_id="HDV7430298.1"
                     /translation="MQEERNSLKYFKFISWSIFTLVLIFILIRYDELANLLAGVAILL
                     IGMTNLGIGFKAFSGGLLEKILAKSTDTKIKSILFGTLSTLIMQSSTLVSIITISFLS
                     AGLISLGAGIGIIFGANLGNTASSWLIVGLTNIKISMLAIPLLIIGVLFFFQKDSVLK
                     GLGNIFIGIGFFFLGVDYIKSGFENFKHIIDLSRFDFAGFKGVFVFLGLGALLTGVIQ
                     SSTATMAIIVAALLAGQISLENSLAATLGTSVGGVVTAVLASLSTNIEGKKLAFASCI
                     FNFGIAFLIVLIFPYFIHFLNFLSIVLNIEDIALKVALFHTLFNLIGVVLFSFFTPQI
                     VLFLNKIVKAPKDKNKDKPLYLDSSLVKFSDTAIEALRKESEHLYNNTYAIVAHAIGF
                     SRKDIQSDKSFKEILENKKWFSKNVDLDYLYQTRIKVLFEAIIDFSTKAQVYINDETK
                     NHKIFTFKMAAKNLAETTKNLKIIQANIKKYSSSSNEFLALEYNKIRSNLGELLRSIE
                     ELRVVEDREKLYLIIKNLQKGKEILKEIDTLTLSNVEHLISVRKITTAEGISILNDTT
                     FAAKIAEELIGAVEVIFSKDISN"
     gene            complement(5912..6346)
                     /locus_tag="RJ318_000401"
     CDS             complement(5912..6346)
                     /locus_tag="RJ318_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430299.1"
                     /translation="MLGIYLLIAALSFLALYFAVKKLTLNIDEQTLLEPIKMDIYPKF
                     CDLIDEKIREFKENVQNTNLALKNSDQKDEFLEKLGDLSRELTFIQTMNLSNKNDSIW
                     QNELFSFLKELENLLLEYLEKGEEEAENLREFLMNEFEKLKG"
     gene            complement(6346..6663)
                     /locus_tag="RJ318_000402"
     CDS             complement(6346..6663)
                     /locus_tag="RJ318_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDV7430300.1"
                     /translation="MIENIPASLWTKQDLNAYQIFDVRTPLEWEEGILPNAQCVALYD
                     NQGLLNAKFLDEFQSKRDESKKLAFICRSGHRSMVAAEFIAEKLGLESINLDGGMLAL
                     KSY"
     gene            complement(6660..8486)
                     /gene="htpG"
                     /locus_tag="RJ318_000403"
     CDS             complement(6660..8486)
                     /gene="htpG"
                     /locus_tag="RJ318_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDV7430301.1"
                     /translation="MQFQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLS
                     VSDDKYKSLKFEPKIEIKIDKDKKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLEN
                     LSGDAKKDSQLIGQFGVGFYSAFMVASKIEVLSKKALDDKAYLWSSDANGYEINDASK
                     EEQGTSITLYLKDDEFANTYKIESIIEKYSNHIQFPIFMEKEEFTPAKEGEEEGKTEL
                     KISQINKANALWRMQKSSLKAEDYERFYEQNFHDSNKPLLYLHTKSEGKLEYNSLFFI
                     PQNAPFDLFRVDYQSGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREI
                     LQENQILKGVKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSL
                     LKLMLYKSTKGENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRASPLLEEYKQKNIEV
                     LLMDDEIDSLVTPMLEFEGLKFVAINQVEDKNELSDEEKNTFAPLVAKFKELLKDQVE
                     DVRLTSRLKDSPSCIVYDKNKPDFAMQQLLKQMGQEQNFKPILEINPKHAIFTGLKNN
                     ESFSADIATLVLNMAKLSEGMGVDNPAEFNASLAKIINKAFS"
     gene            complement(8559..8927)
                     /gene="crcB"
                     /locus_tag="RJ318_000404"
     CDS             complement(8559..8927)
                     /gene="crcB"
                     /locus_tag="RJ318_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HDV7430302.1"
                     /translation="MLNTLLVVGFGGFIGAILRMFSINLVNKFFPYSISLGTLFVNVL
                     GSFIIGLLFSYAQNKGLSPLLKSFISTGFLGAFTTFSTFSYQNLLLLQSGNYLHFALN
                     IILNVFLCLFAAWLGFIIFK"
     gene            complement(8921..9613)
                     /locus_tag="RJ318_000405"
     CDS             complement(8921..9613)
                     /locus_tag="RJ318_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HDV7430303.1"
                     /translation="MIYKKIKALYFWIFFVLSVALVIFCFCFTKSQNTLWKIRKIWAK
                     FQRYTISYKQEIIGTFNPQAQMILMNHQSALDIIALEELYPKNLCWIAKKELGEIPIF
                     KVAMKKPKLLCIDRKNPRDLVRVLKEAKERISEDRVLAIFPEGTRSKNEKMLKFQSGA
                     KILSEKLNLKVQPILIVDSAKILDTKSFSASSGVLKIICMDLVDTNDDKWLENTRKKM
                     QELLDQERAKLC"
     gene            complement(9594..10790)
                     /locus_tag="RJ318_000406"
     CDS             complement(9594..10790)
                     /locus_tag="RJ318_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDV7430304.1"
                     /translation="MKILLTLIFSVVVLFGRGEISVFSDQDENMQKELQKLPQEEQKI
                     YQNIPPSDENNDFESNVDDPFVAKGSLVLTNDEYPSRVYVGEVFPITIYARTTENTKF
                     DFNISVEKTNLSFLNPDAKWEFINNEYKTTLWFEAKNSNASLSKISIKLLRNNEAFQE
                     ADINLNPIKFENTLSNKDFSHLVASSLEIKKVKASYFDDANIIMMVELNATNTNLKSF
                     FIEGIQKQGIENLKGDFNASSAFYYAILPLSKTNFEFSYFNKDSKKLENINLKLKISD
                     DEISTQSDLNPVNKDLNIYKQYTLWFLAVLFGALFIWRKNYIILALAVVCFALSFLVD
                     TNTQNAIIKAGSRAKILPTEPSTYFYTANADEKVEVLGKRQNYIKVLFSDGKIGWVNK
                     DDLQKN"
     gene            complement(10787..11434)
                     /gene="purQ"
                     /locus_tag="RJ318_000407"
     CDS             complement(10787..11434)
                     /gene="purQ"
                     /locus_tag="RJ318_000407"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HDV7430305.1"
                     /translation="MKVAIIRFPGTNCEFDTAYAFEKLGVKTQIVWHEEKEFDADLVV
                     LPGGFSYGDYLRCAAIAKLAPAMQGVFNHAKKGGYILGICNGFQILLESGLLKGAMKH
                     NNNLSFISKNQNLRVVSNDNAFLNNFKKDEIINLPIAHGEGNYYADETTLKELQDKDL
                     ITLKYEPNPNGSVFDIAGICDENKKIFGLMPHPERACEKVLGNDVGLKMLKGFLF"
     gene            complement(11436..11681)
                     /gene="purS"
                     /locus_tag="RJ318_000408"
     CDS             complement(11436..11681)
                     /gene="purS"
                     /locus_tag="RJ318_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HDV7430306.1"
                     /translation="MEVIVNISLKNGVLDPQGKAVEKALHSLNFNSVKEVKIAKQIKI
                     SLDEKDEKLAKEQVKKMCEELLVNSVIEDYELVIEKE"
     gene            complement(11690..12400)
                     /locus_tag="RJ318_000409"
     CDS             complement(11690..12400)
                     /locus_tag="RJ318_000409"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDV7430307.1"
                     /translation="MTKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNES
                     GKGALNCRISTEIFHLLEKNGIKTHLVETISDTEQVVKKCKIVPIEVIVRNVATGSLT
                     KRLGIKDGTVLPFALVEFCLKDDALGDPFINDEHCLILNLVQNEAQISEIKNMARKIN
                     SILTPFFDNKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFSNEKLDKDRFRQ
                     DLGNVKMAYEEVLKRILN"
     gene            complement(12402..13736)
                     /locus_tag="RJ318_000410"
     CDS             complement(12402..13736)
                     /locus_tag="RJ318_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HDV7430308.1"
                     /translation="MMELILKTKRFFAGLAGFATTFILCLFLTSHLQAKVDQKEEQVQ
                     KRLEALDKLTKTLAIVEQYYVDDQNISDLVDKSLSGLLSNLDAHSSFLNEKDFNDMKI
                     QTNGEFGGLGITVGMKDGALTVVSPIEGTPADKAGIKSGDIILKINDEATLGINLNDA
                     VDKMRGKPKTQITLTIFRKGATKPFDVTLTREIIKIESVYAKMIENENILYLRVTNFD
                     KNVVDVASKELKKYPNVKGVILDLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASE
                     NQEYKADPKNKISNASLVVLVNGGSASASEIVSGALQDLKRGVIVGENTFGKGSVQQI
                     IPINKTEALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFSIKESDLKQHL
                     ESELEKIDKNKKEDKQENKDNKNLISQKQINDDAQLKSAIDTIKILNIKQGQ"
     gene            13854..14144
                     /locus_tag="RJ318_000411"
     CDS             13854..14144
                     /locus_tag="RJ318_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensing transcriptional repressor"
                     /protein_id="HDV7430309.1"
                     /translation="MCQEKHTHTHSQKHLKAVCNRLSRTIGHLSAIKRMVENDKDCSE
                     ILIQLAAVKAEVNNTAKVVLKEHLAHCMVHAVEENDIQSIEELNKAIDMFMK"
     gene            14256..16829
                     /locus_tag="RJ318_000412"
     CDS             14256..16829
                     /locus_tag="RJ318_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7430310.1"
                     /translation="MANIQDFLTDNMLSNLESAASLAIHSKNNEVVPLHLLWALSVDS
                     TSILNQILNKLNISKEALELEIKSRISKLATSSNVNRENIRFSNELINSLENAKGLMS
                     ANGDSYLSVDTWLISESQKSPIKEILAQFLDLREFQKELESLRAGRKMDSKTSDETLD
                     SLNKFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVE
                     ALAQRIIKKDVPKSLQNKKVIALDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILF
                     IDEIHTIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQ
                     PVNVGEPSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAID
                     LIDEAAAELKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEIAKELAN
                     LKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASLAKARGEFQKAAELEYGKIPS
                     LEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQKFLEVE
                     KHLKESVIGQDKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKF
                     LFDDEKAMIRFDMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEV
                     EKAHKDVFNVLLGILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMNLSGKEQEDAV
                     KNELKNFFKPEFLNRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENA
                     ALLIAKDGFDPDFGARPLRRAIYDLIEDKLSDMILADELHENDSIIIDAKDDEIIIKK
                     A"
     gene            complement(16857..18788)
                     /locus_tag="RJ318_000413"
     CDS             complement(16857..18788)
                     /locus_tag="RJ318_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HDV7430311.1"
                     /translation="MKILKYIFSFFTLLFIAGFIYVAYLFTSADTEGYTFKEYKPPLT
                     TQIYDRNGKLVANIFEQHRFYAPYEELPPRLIEALVAIEDTSFFEHNGVNIDAIFRAA
                     VKIIKSGGKTMEGASTLTQQFIKNTELTPERTIARKIREALLAYKMETILTKEQILER
                     YLNFIFFGHGYYGVKTASLGYFHKNLNELSLKEIAMLVGMPKAPSSYDPTKHLDLSIS
                     RANNVISRMYNLGWISKADYDTAIKEIPQVYDDTLTQNAAPYVVDEVIKQLSPNIKDL
                     KTGGYKIILNIDLDVQNMAQNALKFGYDEIVKRDKDANLSTLNGAMVVVNHQSGDVLA
                     LVGGVDYEKSNYNRATQSMRQPGSSFKPFVYQVAINLGYSPMSEIADISRIFEGGAGN
                     NEDWKPKNEGGKFLGLITLKEALTRSRNLATINLALDMGLDVLYSKLMEFGFKDIPPN
                     LSIVLGSFGISPLEYSKFYTMFGNYGTIKDPQIIRQVQDKTGKTIMEFNSNERKVSDE
                     AQSFLVLDMMRNVVEKGTGRNARVKDIEIAGKTGTTNKSVDAWFCGLTPEIEAIIWYG
                     NDNNKPMRYTEGGARTAAPVFREFLTQYIEKFPDTTRKFSIPNGVYRGNYKGESAYYT
                     TKSPLPKANMKFNESEIIF"
     gene            complement(18785..19336)
                     /gene="maf"
                     /locus_tag="RJ318_000414"
     CDS             complement(18785..19336)
                     /gene="maf"
                     /locus_tag="RJ318_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HDV7430312.1"
                     /translation="MLILASSSISRANLLKTAKIDFRQVSFDYDENLNKNISPFLYVQ
                     KIVLEKERQFLSTLGKDFQNQNLLFADSIVCIDEKILTKAKDKKEAYEMLALQNGKYA
                     SILSAFLLVKPEKRVFSLSKTTLYFKNFDENALRDYVENDLYKGKAGCIMCEGFHQNF
                     ITQQVGNLSTALGLDIQTLKAYL"
     gene            complement(19336..21864)
                     /gene="alaS"
                     /locus_tag="RJ318_000415"
     CDS             complement(19336..21864)
                     /gene="alaS"
                     /locus_tag="RJ318_000415"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDV7430313.1"
                     /translation="MDIRKAYLDFFASKGHEITPSSPLVPDDATLLFTNAGMVPFKSI
                     FTGEIPRPNPPRKTSCQTCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQA
                     IAYAWEFVTEVLKLPKDRLYVTVHENDDEAFNLWQKHIQKERIYKFGDKDNFWQMGDT
                     GPCGPCSEIFYDQGQEHFNSSEDYMGGDGDRFLEIWNLVFMQYERSADGVLSPLPKPS
                     IDTGMGLERVTAIKEGKFSNFDSSLFMPIINEISKLCNKTYVYESGASFRVIADHIRS
                     SVFLLAQGVSFDKEGRGYVLRRILRRALRHGYLLGFKQAFMYKLVDVVCDLMGGHYTY
                     LNEKKDFIKEQIRLEEERFLSTIENGIEIFNEELKNTKEIFSGEVAFKLYDTYGFPLD
                     LTADMLREKNLKVDEEKFELFMNEQKARAKASWKGSGDKTASGDFKNLLEKFGENHFV
                     GYEKAECESKILALLDEDFKEVSTLKDAGWVMLENTPFYATSGGQSADSGFIAKREVL
                     DTQKFFNLNLSFIKAGEELKVNDIVHARIDTEKREQIARHHSATHLLHHALREILGSH
                     VSQAGSLVESNKLRFDFTHHKALNKEELESIEKRVNKMIINSSEAILENMPLEEAKKS
                     GAIALFNEKYQGNVRVLTLGESKELCGGTHVKNTAQIGSFYIVKESGVSAGVRRIEAV
                     VSKAALEFVKNQLEELSKVKDELKNNDILSGIKKLKNEILSLKNELKNSSKTELDSKN
                     IQGVEICVKRIDNGDIKAMIDDFKNKFAKAVILLIQVKDEKITLAAGVKDAPLKAGAL
                     VKEAAQILGGNGGGRDDFATAGGKDLSKINEALKQSLETIEKAL"
     gene            21979..23052
                     /locus_tag="RJ318_000416"
     CDS             21979..23052
                     /locus_tag="RJ318_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HDV7430314.1"
                     /translation="MNFINLQAQYLAYKDEINAEIESVLSSSSFIGGAKLNEFEQNLA
                     HFLGVKHAIGCSSGTSALYLALRVLDIGKDDEVIVPSFTFIATAEVVALVGAKPVFAD
                     INLSNYNLDFKAVQKAITSKTKAVIAVSMFGQMSDLRALEEILKDKNITLIEDGAQSF
                     GASFKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRY
                     KHEFIGINGRLDTLQAAILNVKLKYLEKELDKRQKLAQIYNANLKNCQIPQINPNAFS
                     AYAQYSVLVEDRASVLRKFEKANIPYAIHYPTPLHKQPCFSEFSNLELKNSEYASEHI
                     LSLPFSPFLSEEEQEQVICIFKD"
     gene            23057..23923
                     /locus_tag="RJ318_000417"
     CDS             23057..23923
                     /locus_tag="RJ318_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDV7430315.1"
                     /translation="MKIGIIGLGKMGQNHLNELSKNSHFKLNALFDLCKNPNLNIFDD
                     IFYDDLDKFLNQNNDIIIIATPTNSHLTIAKKVFKQCKCVLIEKPLALNLKEIDEISN
                     LAKEYSIKVGVGFCERFNPAVLALKKELENEEIISINIQRFSPYPQRISDVGILQDLA
                     VHDLDLLCFLSKQEITKTNLLKKYTQDQTRESESIILCGLEKCIASIHQSWNSTQKLR
                     KIHLITKNHFYEANLNDFSLLKDGNFIELTQQSPLFSEHEALLKLIDNQPNHLASTSD
                     AYKVQEILERFA"
     gene            23920..24831
                     /locus_tag="RJ318_000418"
     CDS             23920..24831
                     /locus_tag="RJ318_000418"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDV7430316.1"
                     /translation="MKLVLFLNMGGATNLQDCEVFLKNMFNDPYILGIKNRFLRKFVA
                     WIITKARVKAMQENYKKMGGKSPLNELTQSLCDKLNLKQDEFKFDFVNLYVPPFATEI
                     LQKYTLNASDEIILFPLYPHHSCTTVTSSLEVLQNEISKQKIQAKVKTIDIFYKNELY
                     NEMIVSHILAKKSKFDAKILIFSAHSLPQSIIDKGDLYEKHVNDHVEILKEKLKDHFD
                     EFILAYQSKLGPVKWLEPNTSDVLANLNDKALIYPISFCIDCSETIFELGMEYKHLSK
                     YNYDLISCPNDSDEFMEFILKYLSDLN"
     gene            complement(24893..26115)
                     /locus_tag="RJ318_000419"
                     /pseudo
     CDS             complement(24893..26115)
                     /locus_tag="RJ318_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882411.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
BASE COUNT         9295 a         4369 c         3671 g         8821 t
ORIGIN      
        1 actagagatg acaattccat ttttaagcac tataaacaaa gctaatataa gcacaacaaa
       61 aaatacaaca atatataaaa ttttcttttt catacgcaac ttctttttga tatttatttt
      121 ggggattttt tattatctaa ctcagccttt aaaaagcaat tctgtggtat ttattcccca
      181 aggttcaatt tctcaaatta taacatattt aaagcaaaat aaatatcaga tgagtaatat
      241 tgataaatat attttatttt ttttaggaca ccctcaatca ggctggatca acataggtac
      301 aaaagattta aatagagctg aatttctaca taaactcact attgctaaag cagcacttca
      361 aaccattact cttatcccag gagaaacaag cgtaatcttt ctagaacaag cagccaaaca
      421 acttggactt gataaagata tacttttaaa agaatttcaa gctcaagctc cttatgatga
      481 aggagttttt ttaccagaaa cttataaaat cccgaaaggc attacagaaa atctactcat
      541 tcaaatgctt ttaaaccatg ctgaaatttc caataaaaaa acttctgaga aaatttttgg
      601 tgattataat ccaaaaaaat ggcaccaata tatcatcatc gcttctgtaa tacaaaaaga
      661 agctgctaat gacaatgaaa tgcctatagt tgcaagcgta atttacaatc gacttaaaaa
      721 aggtatgaag cttcaaatgg atggaacttt aaattatgga atttactccc atgtaaaagt
      781 taccccacaa agaataagac aagataatag cttttataat acctataaat ttacaggatt
      841 gcctaaagaa gcggtttgta atgtttcttt agctgctatt cgtgcagcta tttttccttt
      901 aaagacagat tatttatatt ttgtgcgtga taaaaatact ggagttcata tttttagcac
      961 aaatatagat gatcacaata aagccataaa tttacaaaaa ggaaaataat tttgatattt
     1021 ttatacaaaa cagttaaatt ggaacagtat ttgcttgtta atattaaaaa ttataaaaag
     1081 gataaaaaat gattaaccca tttaaatcaa aagaactagt cactggtgct ttagcgggta
     1141 gaaatctaag aaatcaactc atcaatgcca atcttgcaaa tgttgatact cctttttata
     1201 aagcaagaga tattgaattt gaaacagctt tggtaaatcg tgcaaatgaa attttcaaaa
     1261 aaaatgacaa aaaagaatta gaattggcag taaccgaaga agggcatcaa aaaccttgga
     1321 aatttcctga tcctagtaaa tctactattt acttaagaga tggtcatttg gcaagaaatg
     1381 atgcaaatac tgttgatcta gatgtagaaa ctacagaaat gagtaaaaat acagttatga
     1441 taacagctct tgatggagtt ttaagaagac aaagcaatat ctttagttct atacttgatg
     1501 caagctctaa attaagttaa aggtaaatta tggcatactt aagtgatttt gatattagtg
     1561 gttatggttt aagtgctcag cgttttagaa tgaatgttat tagctctaat atagctaatg
     1621 caaacactac aagaacagct gaaggtgggc cttatagaag acgcgaagtg atctttaaag
     1681 caacagattt tgataagctt ttaaatgagc aaattaacaa agataataat tttttaaaat
     1741 atgaaaatcc tttaaatgat ccaagttcgc cagaagaagc taaacctgct attcaaagtg
     1801 ttgtagtgga taaagtggtc agagatgaca aagattttcg tatgaagtat gatccaagcc
     1861 atcctgatgc aaatgctgaa ggttatgtag cgtatccaaa tgtaaaccct gttattgaaa
     1921 tggcagattt gattgaagct acaagagctt atcaagccaa tgtaagtgct tttacaagtg
     1981 caaaaactat agctcaaagt gcgattgatt tattaagagg ataataaaaa atgaacaata
     2041 ttaatgattt aagattaaat aataatattt caaataccaa caaaagtcaa aattccacag
     2101 gaattggtga tgaatttgcc aagatgctta aaaatgaaat cgatgattta aataaagcac
     2161 aagaaagtgg agaagctgca atgacagaca ttgccacagg acaagtaaaa gatttacatc
     2221 aagcagctat agctatcact aaagctgaaa gcagcatgaa atttatgcta gaagtaagaa
     2281 ataaagcgat cagtgcttat aaagaaatca caagaactca aatttaaacc ctaatgcaag
     2341 aatataaaaa aaatagggtt tcaaaagttg cctttgccta ctgcatggca cttttgttta
     2401 tgattatttt tatcagctct actttttttc ttacatcaaa acgtcatata cctaacactg
     2461 aaaaagatca atacgctctt gctctaagag gatcgattat aaccaaagat aattttacta
     2521 tcacaagttc taaacaaatt tatcgtgctg aaattgatct tagaagcatt aacaaagata
     2581 aatttgatct atttttaaag ctttttcaaa tttatagtgg gataagtaac gatcaagtag
     2641 cagatattaa aaaaagaatg caaaatcaaa aaaaacgctc ttataatttt gttcttttac
     2701 aaaacttaga ctccaagcaa gcaagctacc ttaaagatct tgctaaaaaa ctttatatac
     2761 aaggtttttt caaagctttt acaaataact caggaagagt tgaaacaaga ggattaaata
     2821 tcatcgaaca tgaagaagat agaatttaca tgtcaaaaga ttcttttact cctattatcg
     2881 gttatactaa aatgatatta gatccagaaa gtggaatttt aaaaaatata ggagttaaag
     2941 gtttagaaaa atactacgat gcatgtctaa gccctgttca aaatgaaaaa attcaaggac
     3001 ttaaagatat aggtggaaat attattttaa atctaaattc actacaacaa aaaaagatca
     3061 atggttgtga tttatattta aatctttctt taaaactgca aaaaagtata gagaaagcta
     3121 tagatcaaag aaatgaggat ttaaaagcca atgaaatcat cgttggggta atggaaagta
     3181 aaacaggaag aattttagct ctagcaagct caaggcgtta tgacccacaa aatcgcggaa
     3241 aggatctatc agttcttaat gcaagcgcta tagaatacgg ctatgaagca ggttctgtta
     3301 tcaaaccttt tatctttaca acagccttaa gacttggtaa aataaaaatg gatgaagtga
     3361 ttaatactta tggcggttct tacaagctag gacgtttcac catcaaagac gatcacaaaa
     3421 tggacaaaat gactatggag gaagttataa gatattcttc aaatataggc atgatacaaa
     3481 ttgctaaaag acttaacaat atagaaatcg tatcagggct taaaatattt aaatttggcg
     3541 aaaaaagtgg tattgatcta ccctatgaac aaaaaggaga aattccaaat cctaagcgct
     3601 taagagatat agaaaaatct gttttaagtt atggttatgg acttaaaaca acctttatac
     3661 aactccttgc agcttataat gttttcaaca atgatgggtt ttatatcaca ccacgtttag
     3721 ctgaaaaatt ctatcaaaat ggacgcttta caaatcttga tgatgatgta aaaaaagaaa
     3781 aaattctttc tagcgaagcc gctaaaacga tgcaaaatgt tcttataaat gttatagaaa
     3841 aaggaacagg aaaaaaggca attacacaag gtattattgc aggaggtaaa acaggaacgg
     3901 caagaatagc cgaaagacaa ggttacacct caaatcgcta caatgcatcc ttttttggtt
     3961 ttgcaaatga tttaaatcac gcctatacca taggagttct cgtaagacat cctactaaac
     4021 cttatagtta ttatgctgca caaagtgctt tgcctatgtt taaagatgtt gttgatattt
     4081 taatcaatga agaatttcta acgcctatac aagacaataa ctaaactagc acaaacaact
     4141 agtttgatat atctttagaa aatatcacct caacagcacc tataagttct tcagcaatct
     4201 tagcagcaaa agttgtatca ttaagtattg aaattccttc agctgttgtg atttttctta
     4261 ctgaaataag atgttcaaca ttgctcaagg ttaaagtatc gatttctttt aaaatttctt
     4321 ttcctttttg aagattttta ataatcaaat aaagcttttc acgatcttca acaactctaa
     4381 gctcttcgat acttcttaaa agctctccta aattcgatct aattttattg tactctaaag
     4441 ccaaaaattc attagaagaa ctagaatatt tcttaatatt tgcttggata atttttaaat
     4501 ttttagttgt ttcggctaaa tttttagctg ccatcttaaa ggtaaaaatt ttatgattct
     4561 ttgtttcatc gttaatataa acttgtgctt tagttgaaaa atcgataata gcttcaaaaa
     4621 gaacctttat cctagtttga tacaaatagt ccaaatccac atttttacta aaccactttt
     4681 tattttctaa aatttcttta aaacttttat cactttgtat atctttacga ctaaaaccta
     4741 tagcatgagc aacaattgca taggtattgt tataaagatg ctcgctttct ttccttaaag
     4801 cttcgatggc tgtgtcacta aacttaacca aactactatc aagatataaa ggcttgtctt
     4861 tattcttatc tttaggagct tttactatct tatttaaaaa aagaacaatt tgaggagtaa
     4921 agaatgaaaa aagcacaaca ccaattaaat taaacaaagt gtgaaataat gctactttca
     4981 aagctatatc ttctatgttt aatacaatgg ataaaaaatt aagaaaatgt ataaaataag
     5041 gaaaaataag cactattaaa aaagctatac caaaattaaa aatacaactt gcaaacgcta
     5101 atttctttcc ttcaatattg gtacttaaag aagctaaaac agccgttaca actcctccaa
     5161 cactagtacc taaagttgct gctaaggaat tttccaaact gatttgtcct gcaagtaaag
     5221 cagcgacaat aatagccatt gtagctgtgc ttgattgtat aactcctgta agcaaagcac
     5281 ctaatcctaa aaaaacaaaa actcctttaa aaccagcaaa atcaaaacga gaaagatcaa
     5341 ttatatgttt aaaattttca aaaccacttt taatataatc cacacccaaa aagaaaaatc
     5401 ctataccaat aaaaatatta cccaaacctt ttaaaacact atctttttga aagaaaaata
     5461 atactccaat aatcaaaagt gggatagcta gcattgaaat tttaatattt gtcaaaccaa
     5521 caatcagcca agagcttgcc gtatttccta aatttgctcc aaaaataatc cctatgcccg
     5581 cacccaaaga aataagccct gcactcaaaa aagaaatcgt aataatagaa actaaagttg
     5641 aagattgcat aattaaagta cttaaagtac caaaaagtat actttttatc tttgtatcgg
     5701 ttgacttcgc taaaattttt tcaagtaaac caccactaaa agctttaaaa cctataccta
     5761 aattagtcat tccaataaga agtattgcca ctcctgctaa aagattggca agctcgtcat
     5821 aacgaattaa aataaaaatc agaactaaag taaaaatact ccatgaaata aatttaaaat
     5881 attttaaaga atttctttcc tcttgcaatg cctaaccttt tagtttttca aattcattca
     5941 tcagaaattc tcttaaattt tcggcttctt cttcgccttt ttctagatac tcaagcaata
     6001 aattttctaa ttcctttaaa aaagaaaaaa gttcattttg ccagatacta tcgtttttat
     6061 tgcttaaatt catggtttgt atgaaagtca actctctgct taaatcccca agtttttcta
     6121 aaaattcatc tttttgatca gaatttttta atgctaaatt agtattttgg acattttctt
     6181 taaattctct gattttttca tcgattaaat cgcaaaattt cggataaata tccattttaa
     6241 taggctctaa aagggtttgc tcgtctatat ttaaagtaag ctttttaaca gcaaaataaa
     6301 gagctaaaaa agacaaagct gctatgagta aataaattcc tagcattaat aactcttaag
     6361 ggctagcatt ccgccatcta aattgatgct ttcaagtccc aatttttcag ctataaattc
     6421 agctgcaacc atgcttctat ggccactacg acaaataaaa gcaagttttt tactttcatc
     6481 tcttttgctt tgaaattcat ctaaaaattt agcatttaaa agcccttgat tatcatataa
     6541 agccacacat tgcgcattag gtaaaatacc ttcttcccat tctaaaggag tacgcacatc
     6601 aaaaatttga tatgcgttta aatcttgctt tgtccaaaga cttgcaggga tattttctat
     6661 catgaaaaag ccttattgat aatttttgca aggcttgcat taaattcagc aggattatcc
     6721 actcccatac cttcgcttag ttttgccata tttaaaacta gggttgctat atctgcacta
     6781 aaactttcgt tgtttttaag acctgtaaaa atagcgtgct ttggattgat ttctaaaata
     6841 ggtttgaaat tttgttcttg acccatttgt tttaagagtt gttgcatagc aaaatcaggt
     6901 ttatttttat cgtaaactat acaacttggg ctatctttca agcgactggt tagtcttaca
     6961 tcttcaactt gatcttttag aagttcttta aatttagcta caagtggagc aaaagtattt
     7021 ttttcttcat cgcttagttc atttttatct tctacttgat taatggctac aaatttcaaa
     7081 ccttcaaatt ctagcatagg agttactaaa gaatcaatct catcatccat gagtaaaact
     7141 tctatatttt tttgcttata ttcttcaagt aaaggagagg ctcttaataa actttcatta
     7201 tttcctgcta tataaaaaat ttccttttgc tcgccttgaa ggtcattttt atactcttct
     7261 aaagagcgta aattttcacc tttggtgctt ttataaagca tgagttttaa aagactgtct
     7321 ttttctccgc caaaaccata aagtccttct tttaatacct taccaaaggt tttaaagaaa
     7381 gataagtatt tttctttatc attgttttta agtttttcaa gttcacctaa aatcttttta
     7441 acgctagctt ctttaacacc ttttaaaatt tgattttctt gtaaaatttc acggcttaca
     7501 ttaagtggta aatcttctac atcgataatc ccacgcacaa aacgcaaata agttggtaaa
     7561 agttctttat catcatcgct gataaataca cgttttacat aaagttttaa gccgctttga
     7621 taatccacac ggaacaaatc aaaaggtgca ttttgtggta tgaaaaataa ggaattgtat
     7681 tctaattttc cttcgctttt agtgtgaaga taaagtaaag gtttgtttga atcatgaaaa
     7741 ttttgctcat aaaatctttc ataatcttct gctttaaggc ttgatttttg cattctccat
     7801 aaagcattgg ctttattgat ttgagaaatt ttaagttcag tttttccttc ttcttcgccc
     7861 tctttagcag gagtaaattc ttctttttcc atgaaaattg gaaattgaat atgattagaa
     7921 tatttttcta taatgctttc gattttataa gtattagcaa actcatcatc ttttaaatat
     7981 aaagtaatgc ttgttccttg ttcttctttg cttgcgtcat taatctcata accatttgca
     8041 tcggaactcc aaagataagc tttatcatct aaagcttttt tacttaaaac ttcgattttg
     8101 ctagccacca taaaagcaga ataaaaacct actccaaatt gtcctatgag ttgagaatct
     8161 tttttagcat caccgctcaa attttctaaa aagcttttag tgccactttt tgctatggtt
     8221 ccaaggttgt tgataagatc atctttatcc atacctatac cattatcact aatacttaaa
     8281 gtttttttat ctttatcaat tttgatttca attttaggtt caaattttaa gcttttatat
     8341 ttatcatcac ttacgcttaa aaaattaagc ttatctaaag catcgcttgc atttgaaata
     8401 agttctctta aaaaaatttc tttattagaa tataaagaat gtatcataag ctgtaaaagc
     8461 tgattgactt cggtttgaaa ttgcatttta acttcctttg taatttttta aagtggtatt
     8521 ttagcaaaaa atacaaattc taaagtaaat ttaaagattt atttgaaaat tataaaacca
     8581 agccatgcgg caaataagca aagaaagaca tttaagataa tatttaacgc aaaatgaaga
     8641 taatttccac tttgcaaaag aagtaaattt tgataagaaa aagtagaaaa agttgtaaaa
     8701 gctcctaaaa aacctgtact tataaagctt ttaagtaaag gagataaacc tttattttgt
     8761 gcataagaaa acaaaagtcc tatgataaaa gaacccaaaa cattaacaaa aagagttcca
     8821 aggctgatag aataaggaaa aaatttattc actaaattaa tagaaaacat tcttaagatt
     8881 gctcctataa atcccccaaa accaacaact aaaagggtat ttagcaaagc ttagctcttt
     8941 cttgatcgag taattcttgc attttttttc tagtgttttc aagccatttg tcatcatttg
     9001 tatcgactaa atccatacaa atgattttaa gcactccgct gcttgcacta aaactttttg
     9061 tgtctaaaat ttttgcagaa tccacaatta aaatgggttg aactttaaga tttaattttt
     9121 cacttaaaat ttttgctcca ctttgaaatt taagcatttt ttcattttta gatctagttc
     9181 cttctggaaa aatagccaaa accctatctt cgctaattct ttcttttgct tcttttaaaa
     9241 ctcgtaccaa atcacgcgga ttttttctat ctatacaaag aagttttggt tttttcatag
     9301 caactttgaa aataggaatt tctcctaatt cttttttggc aatccagcat aaatttttag
     9361 gatataattc ttctaaagcg atgatatcta aagcactttg atgattcatt aaaatcatct
     9421 gagcttgcgg attaaaagtg ccaataattt cttgtttata agagatagta tatctttgaa
     9481 atttagccca aattttgcgg attttccaaa gtgtgttttg agattttgta aagcaaaaac
     9541 aaaaaatcac caaagcaaca cttaaaacaa aaaaaatcca aaaataaaga gctttaattt
     9601 ttttgtaaat catctttatt aacccaacct atttttccat cagaaaacaa tactttaata
     9661 taattttgtc ttttgcccaa aacttctact ttttcatctg catttgccgt ataaaaataa
     9721 gttgaaggct ctgtaggtaa aattttagcc ctagaaccag ccttgataat tgcattttga
     9781 gtattggtat ctacaagaaa actaagtgca aaacaaacaa ctgccaaagc cagaataatg
     9841 taattttttc tccatataaa taaagctcca aataaaaccg ctaaaaacca taaggtatat
     9901 tgtttataaa tatttaagtc tttatttaca ggatttaaat cactctgagt gctgatctca
     9961 tcgtcactaa tttttagttt taaatttata ttttcaagct ttttactgtc cttattgaaa
    10021 tacgaaaatt caaaatttgt tttacttaat ggcaaaatag cataataaaa agcactagaa
    10081 gcattaaaat ccccttttaa attttcaata ccttgctttt gaattccttc tataaaaaag
    10141 cttttaagat ttgtattggt tgcgtttagt tctaccatca taatgatatt agcatcatca
    10201 aaataactcg ctttaacttt tttaatttcc aaagaacttg ccacaaggtg tgaaaaatct
    10261 ttattggata aagtattttc aaatttgata ggattaagat tgatatcagc ctcttgaaaa
    10321 gcttcattat ttctaagaag tttgatagaa attttactca aactagcatt tgaatttttg
    10381 gcttcaaacc ataaagttgt tttatattcg ttattgataa attcccattt tgcatctgga
    10441 tttaaaaaag ataagttagt tttttctacg cttatgttaa aatcaaattt tgtattttcc
    10501 gtagtgcgag catagatcgt aataggaaaa acttctccaa catataccct acttggatat
    10561 tcatcatttg taagaaccaa actccctttg gctacaaaag gatcgtctac attgctttca
    10621 aagtcattgt tttcatcact tggcggaata ttttgataaa ttttttgttc ttcttggggt
    10681 aatttttgta attctttttg catattttca tcttggtcac taaatacaga aatttcaccc
    10741 ctgccaaaca atacaacaac gctaaaaatc aaagttaata aaattttcaa aataaaaagc
    10801 ctttaagcat ttttaaacct acatcattac ctaggacttt ttcacaagca cgctcaggat
    10861 gtggcatgag tccaaaaatt tttttgtttt catcacaaat tcctgcgata tcaaatacag
    10921 aaccatttgg atttggctcg tattttagag taataagatc tttatcttgt aattctttta
    10981 aagtagtctc atcagcgtaa taatttccct ctccatgggc aattggtaaa ttaataattt
    11041 catctttttt gaaattattc aaaaaggcat tatcattaga aactactctt aaattttggt
    11101 tttttgagat aaagctaaga ttgttgttat gcttcattgc accttttaaa agaccgcttt
    11161 caagtaaaat ttgaaaacca ttgcaaatac ctaagatata tcctcccttt tttgcatgat
    11221 taaaaacacc ttgcatagca ggagcaagtt ttgcaatagc tgcacatctt agataatctc
    11281 cataagaaaa tccgcctggc aaaacaacta aatctgcatc aaattctttt tcttcatgcc
    11341 aaacaatctg cgtttttact ccaagttttt caaaggcata agctgtatca aattcacaat
    11401 ttgtccctgg aaatctaata atagcaactt tcattttact ctttctcaat tacaagctca
    11461 taatcttcaa tgacgctatt taccaacaac tcttcacaca ttttttttac ttgttctttg
    11521 gctaattttt catctttctc atcaagagaa attttgattt gttttgctat ttttacttct
    11581 ttaacactat taaaatttaa agaatgcaaa gctttttcca ccgctttgcc ttgtggatct
    11641 aaaaccccat tttttaaaga aatatttaca ataacttcca tatttttcct taatttaata
    11701 ttctttttaa aacttcttca taagccattt ttacattacc taaatcttga cgaaatctat
    11761 ctttatctaa tttttcattg ctaaatttat cccaaaatct acaactatca gggcttattt
    11821 catcagctaa aacaagctca ttatctttag ttaaacccag ttcgatttta aagtcaatca
    11881 gccttaaatt tttattatca aaaaatggag ttaaaataga gttaatcttt ctagccatat
    11941 ttttaatttc actaatttga gcttcatttt gcactaaatt taaaatcaaa caatgctcat
    12001 cattgataaa aggatcgcct aaagcatcat ctttaagaca aaattccacc aaagcaaaag
    12061 gtagcacagt accatcttta atgcccagtc tttttgtaag agaacctgtt gcaacattgc
    12121 gtactataac ttcaatagga acaattttac attttttaac cacttgttct gtatcgctta
    12181 tagtttctac caaatgggtt ttaatcccat ttttttcgag caaatgaaaa atttcagtac
    12241 tgattctaca gtttaatgca ccttttccac tttcattgcc tcttttttct gcattaaaag
    12301 cggttaaatc atctttaaac tcactaatta gtaaattttc atcatcagtt ttgaaaagtt
    12361 ttttaccttt tccttcgtag agcatttctt tttttgtcat tttattgtcc ttgtttgata
    12421 tttaaaattt taatagtatc aatagctgat tttaactgtg cgtcatcatt gatttgtttt
    12481 tgactgatta gatttttatt gtctttattt tcttgtttat cttctttttt atttttatct
    12541 attttttcaa gctcactttc taaatgttgt tttaagtcgc tttcttttat agaaaaacca
    12601 tcttcttgag tatttacttt acctggaaaa acttcaatat caggttttac acccactgct
    12661 tgaatagtac gcccgcttgg aagataatat cttgcaatag taagccttaa agcttcagtt
    12721 ttattaatag gtatgatttg ctgaacacta ccttttccaa aagtattttc acccacaata
    12781 acaccacgtt taagatcttg taaagctcca cttacaattt cacttgcact agcacttcca
    12841 ccatttacaa gcacaaccaa agaagcatta gaaattttgt ttttaggatc ggctttatat
    12901 tcttgatttt cacttgcgat gcgtcctttt tgagaaacaa taacaccttt atctacaaat
    12961 aaatttacaa gtcctatggc ttgatttaaa agtccaccag gattatttct aagatctaaa
    13021 ataactcctt taacattagg atatttttta agttctttac ttgccacatc tacaacattt
    13081 ttatcaaaat ttgtaaccct aagataaaga atgttttcat tttctatcat ttttgcataa
    13141 acactttcta tcttaataat ttctcttgta agtgtaacat caaaaggttt tgttgcacct
    13201 tttctaaaaa tagttaaagt gatttgagtt tttggcttac cacgcatttt atctacagca
    13261 tcattgagat taattcctaa agtggcctca tcattaattt ttaaaataat atctcctgat
    13321 tttatccctg ctttatctgc tggtgttcct tctataggag aaacaactgt taaagcacca
    13381 tctttcatac ctacggttat accaaggcca ccaaattcgc cattggtttg aattttcata
    13441 tcattaaaat ctttttcatt taaaaaagaa gaatgcgcat caagattgct taaaagtcct
    13501 gataaagatt tatccaccaa atcgctgata ttttgatcat ccacatagta ttgctctact
    13561 atggcaagag tttttgtaag cttatctaaa gcttctaggc gtttttgaac ctgctcttct
    13621 ttttgatcaa ctttagcttg taaatgactt gttaaaaata gacataaaat gaaagtagtg
    13681 gcaaagcctg caagacccgc aaaaaatcgt tttgttttca aaataagctc catcattgag
    13741 ttttagttta aagagtaaat tttaataaaa attgcttaaa aattcgtaaa taaatttaaa
    13801 ttcttaaaaa tatgttaaaa tagactaaaa atttcaaaaa gaaagttaat acaatgtgcc
    13861 aagaaaaaca tactcataca cattctcaaa aacatcttaa agcagtttgc aatcgtctaa
    13921 gtagaaccat aggacattta agcgctatta aaagaatggt tgaaaatgac aaagactgta
    13981 gtgaaatttt aatccagctt gctgccgtaa aagccgaagt taacaatact gcaaaagtag
    14041 ttttaaaaga acatttagct cattgtatgg tacacgccgt agaagaaaat gatattcaaa
    14101 gtatagaaga attaaacaag gctatagata tgtttatgaa ataatctaaa attagtcatt
    14161 tgtcctatta tttaaaaaat tttactcaat taacttgaca ttatatgact aaagttatat
    14221 aatagcaagt ctataaacta aataaaggat aaaacatggc aaatatacaa gattttttaa
    14281 ctgataatat gctttcaaac cttgaaagtg cagcatcttt agctatacat tctaaaaata
    14341 atgaagttgt acctttacat cttttatggg ctttaagcgt agatagtaca agtattttaa
    14401 atcaaatttt aaataaatta aatatttcta aagaagcctt agagcttgaa attaaaagca
    14461 gaatttcaaa acttgcaacg agttcaaatg taaaccgtga aaatatacgc ttttccaatg
    14521 aacttataaa ttcattagaa aatgctaaag gattaatgag tgctaatgga gatagttatt
    14581 taagtgtgga tacttggctt ataagtgaaa gtcaaaaaag tcctattaaa gaaattttgg
    14641 cgcaattttt agatttaaga gaatttcaaa aagagcttga aagtctaaga gcgggacgaa
    14701 aaatggatag caaaacaagc gatgaaactt tagatagctt aaataaattt ggtatagatt
    14761 taaccttaaa agcaagcgag ggtaaacttg atcctgttat aggcagagaa gaagaaatcg
    14821 aacgtttgat gcaaatttta atacgtaaaa ccaaaaataa ccctatactt ttaggtgaac
    14881 caggcgtagg aaaaacagct atagtagaag ctttagcaca aagaattatt aaaaaagatg
    14941 ttccaaaatc tttgcaaaat aaaaaagtca tcgctcttga tatgagtgct ttaattgcag
    15001 gtgcaaaata cagaggagaa tttgaagata gattaaaagc tgtggttaat gaagtgataa
    15061 aaagtgaaaa tatcattctt tttatcgatg aaattcacac tatagtagga gctggagcga
    15121 gtgaaggcag catggatgcg gcaaatattt taaaacctgc tcttgcaaga ggtgaactcc
    15181 ataccatagg cgcaactact ttaaaagaat atcgtaaata ttttgaaaaa gatgcagcct
    15241 tgcaacgccg ttttcaacct gtaaatgtag gtgagccaag tgttaatgag gctttggcta
    15301 tgttaagggg tataaaagaa aagcttgaaa ttcatcataa tgtaaccata aatgatagtg
    15361 ctttagtagc cgcagctaaa ctttcaaagc gttatatagc agatcgtttt ttacctgata
    15421 aggccattga tttaatcgat gaagctgcag ctgaactgaa aatgcaaatt gaaagcgaac
    15481 caagttcttt aagaaaagta cgcaaagata tagaaacttt agaagttgaa aatgaagctt
    15541 taaaaatgga aaatgatgaa aaaaatcaaa aaagactcga tgaaatcgca aaagaactag
    15601 ctaatttaaa agaaaaacaa aatgccctaa attcacagtt tgaaaatgaa aaaagtgttt
    15661 ttgatggcat aagtgctaag aaaaaagaaa ttgatctgct taaaaatgaa gcttctttgg
    15721 ctaaagctag aggtgaattt caaaaagcag ccgagctaga gtatggaaaa attccaagtc
    15781 ttgaaaaaga agtagaaatt ttagaagata aatggaaaaa aatgagtgaa aatggagttt
    15841 tacttaaaaa tcaagtagat gaggatttgg ttgctggaat tttaagcaaa tggacgggta
    15901 ttagcgtgca aaaaatgtta acttctgaaa aacaaaaatt cttagaagtg gaaaaacatt
    15961 taaaagaaag tgtcatagga caagataagg ccttaagtgc tttagctaga gccattaaac
    16021 gtaacaaagc agggcttaat gcggacaata aacctatagg aagcttttta tttttagggc
    16081 caacaggggt aggaaaaaca caatcggcta aagctttggc aaaattttta tttgatgatg
    16141 aaaaagcaat gattcgcttt gatatgagtg aatttatgga aaaacatagt gtttcaagac
    16201 tcttaggtgc gcctccagga tatataggac atgaagaagg tggagagctt actgaagccg
    16261 tacgaagaaa accttatagc gtgcttttgt ttgatgaagt tgaaaaagca cataaagatg
    16321 tatttaatgt gcttttaggg attttagatg atggtagagc aaccgatagc aaaggtgtaa
    16381 cagtggattt taaaaatacc attattattt taacttctaa tattgcctca agcgctatta
    16441 tgaatttaag cggaaaagaa caagaagatg cggtaaaaaa tgagttaaaa aatttcttta
    16501 aacctgagtt tttaaaccgc ttagatgata ttatcacctt taatccactt ggaaaagatg
    16561 aagcttatga aatagttaag cttttattta aagatttaca aatgagctta gaaaacaagg
    16621 ggataaaagc aagtttaagc gaaaatgcag ctcttttaat cgctaaagat ggttttgacc
    16681 ctgattttgg tgctagacct ttaagaagag ctatttatga tcttatagaa gataaattaa
    16741 gcgatatgat acttgctgat gaacttcatg aaaatgatag cattatcatt gatgcaaaag
    16801 atgatgaaat aatcatcaaa aaagcttaat cattttgaaa gtagattttt ctactttcaa
    16861 aatataatct cgctttcatt aaatttcata tttgcttttg gtaatggtga tttggtggta
    16921 taataagcac tttctccttt ataatttcca cgataaactc cattaggaat gctaaatttt
    16981 ctagttgtat cagggaattt ttctatatat tgagttaaaa attctctaaa cacaggagca
    17041 gctgttctag ccccaccttc tgtataacgc ataggcttgt tgttatcatt tccataccaa
    17101 atgattgctt ctatttcagg cgtaagtcca caaaaccaag catcaacact tttattcgtt
    17161 gttcctgttt ttcctgctat ttctatatct tttactcttg cattgcgtcc tgtgcctttt
    17221 tcaacaacat ttctcatcat atctaaaacc agaaaacttt gcgcttcatc gctgacttta
    17281 cgctcatttg agttaaattc catgatggtt ttaccggttt tatcctgaac ttgtctgata
    17341 atttgaggat ctttaattgt accatagttc ccaaacatgg tataaaattt cgaatactcc
    17401 aaaggagaaa taccaaaact tcccaatacg attgataaat taggcggtat atctttaaat
    17461 ccaaattcca ttagtttaga gtaaagaaca tcaagcccca tatcaagtgc gagattaatg
    17521 gtagctaaat ttcttgatct tgttaaagct tcttttaagg taattaaacc taaaaattta
    17581 cccccttcat ttttaggttt ccaatcctca ttattacccg ctccaccttc aaaaattcta
    17641 gaaatatcag caatttcact cataggcgaa tatcctaaat taatcgccac ttgatacaca
    17701 aaaggtttaa aagagcttcc aggttgacgc atactttgag tagcacggtt ataattactt
    17761 ttttcataat caaccccacc taccaaagct aaaacatcgc cactttgatg atttaccacg
    17821 accatagctc cgtttaaagt gcttaaattt gcatctttat cgcgttttac tatctcatca
    17881 taaccaaatt tcaaagcatt ctgcgccata ttttgaacat ctaagtctat atttaaaatg
    17941 attttatatc cacctgtttt taagtctttg atattagggc ttaattgttt aatcacttca
    18001 tctacaacat aaggagcagc attttgagta agcgtatcat cataaacttg cggaatttct
    18061 ttaatggctg tatcataatc tgcttttgaa atccaaccta gattatacat tcttgaaata
    18121 acattatttg ctcttgagat ggaaagatct aaatgctttg taggatcata actgctaggt
    18181 gcttttggca tacctactaa catagcaatc tctttaaggc ttaattcatt taaattttta
    18241 tgaaaatacc ccaaagatgc ggtttttact ccataatacc catgtccaaa aaagataaaa
    18301 tttaaatacc tttctaaaat ttgctcttta gttaaaatgg tttccatctt ataagcaagc
    18361 aaagcttcgc gaattttacg cgcaatagtt ctttctgggg ttaattctgt gtttttaata
    18421 aattgctggg taagagtgga agctccttcc atggtttttc caccgctttt tatgattttt
    18481 acagcagctc taaaaatggc atcgatatta actccattat gttcaaaaaa gcttgtatct
    18541 tctatagcaa ctaaagcttc tataaggcgt ggaggaagct cttcataagg agcgtaaaaa
    18601 cgatgctgtt caaaaatatt agccacaagc ttgccatttc tatcgtaaat ttgtgttgta
    18661 agaggaggtt tgtattcttt aaaagtataa ccctcagtat cagcacttgt gaaaagataa
    18721 gccacataaa taaatccagc tataaacaaa agagtaaaaa atgaaaaaat atattttaat
    18781 attttcataa ataagccttt aaagtttgga tatcaagccc taaagcagtg cttagatttc
    18841 ctacttgttg ggtgatgaaa ttttgatgaa aaccctcaca cataatacaa cccgccttgc
    18901 ctttataaag atcattttct acataatctc ttaaagcatt ttcatcaaaa tttttaaaat
    18961 aaagcgtagt ttttgaaaga gaaaaaactc ttttttcagg ttttacaagc aaaaaagccg
    19021 ataaaatact tgcatacttg ccattttgca aggcaagcat ttcataagct tcttttttat
    19081 cctttgcttt ggtaagaatt ttttcatcta tacaaactat actatctgca aaaagcaaat
    19141 tttggttttg aaaatctttg cctaaagtac ttaaaaattg tctttctttt tcaagaacta
    19201 ttttttgaac atataaaaaa ggtgaaatat ttttatttaa attttcatca taatcaaaac
    19261 taacttgcct aaaatcaatc tttgcggttt taagcaagtt agctcttgaa atggaacttg
    19321 aagcaagaat taacattaaa gtgctttttc tatcgtttct aagctttgtt ttaaagcttc
    19381 attgattttg cttaaatctt ttccacctgc agtagcaaaa tcatctcttc cgccaccatt
    19441 tccacctaaa atttgcgccg cttctttaac caaagctcct gcttttaaag gtgcatcttt
    19501 aacaccagct gctaaagtga ttttttcatc ttttacttga ataagtaaaa tcaccgcttt
    19561 agcaaattta tttttaaaat catcaatcat agctttaata tcgccattat ctatacgttt
    19621 tacgcaaatt tcaacacctt ggatattttt agaatcaagc tcggttttac ttgaattttt
    19681 aagctcattt tttaaactta aaatttcatt tttaagcttt ttaatcccgc ttaaaatatc
    19741 attattttta agttcatctt ttactttaga aagttcttcg agttgatttt ttacaaattc
    19801 taaagccgct ttagaaacca cagcttcaat acgtctaact ccagcactca caccactttc
    19861 tttaactatg taaaaacttc ctatttgagc agtattttta acatgagttc ccccgcaaag
    19921 ttctttgctt tcacctagag ttaaaacacg cacattgcct tggtattttt cattaaacaa
    19981 tgctatagca ccgctttttt tagcttcttc taaaggcata ttttctaaga tagcttcgct
    20041 tgagtttata atcattttat tgactctttt ttcaatgctt tctagctctt ctttgtttaa
    20101 agctttatga tgagtaaaat caaatcttag tttattgctt tcaaccaaag atcctgcttg
    20161 gcttacatga gaacctaaaa tttctcttaa agcatgatgt aaaagatgag tggctgagtg
    20221 gtggcgtgcg atttgctctc ttttttctgt atcgattctt gcatgaacta tatcgttaac
    20281 ttttagttct tcgcctgctt ttataaagct aagattgaga ttaaaaaact tttgcgtatc
    20341 taaaacttca cgcttagcta taaatccact atcagcactt tgccccccac ttgttgcata
    20401 aaaaggtgtg ttttcaagca tcacccaacc cgcatcttta agggtggaaa cttctttaaa
    20461 atcttcatct aaaagggcta aaattttact ttcgcattct gctttttcat aacctacgaa
    20521 atgattttct ccaaattttt caagtaagtt tttaaaatct ccgcttgcag ttttatctcc
    20581 acttcctttc caagaagcct tagcgcgtgc tttttgctca ttcatgaaaa gttcaaattt
    20641 ttcttcatca actttaagat ttttttctct tagcatatca gccgttaaat caagcggaaa
    20701 accataagta tcataaagct taaaggctac ttctccgcta aaaatttctt tagtgttttt
    20761 aagctcttca ttaaaaattt caatcccatt ttctatagtg cttaaaaatc tttcttcttc
    20821 aaggcgaatt tgttctttta taaagtcttt tttctcatta agataggtat aatgtccgcc
    20881 cattaaatcg cacacaacat caactagttt atacataaaa gcttgtttaa aacctagcaa
    20941 atatccatgc cttaaagcac gacgcaaaat acgacgcaaa acataacccc taccttcttt
    21001 atcaaaactt accccttgtg caagtaaaaa tacacttgat cttatatgat cagctatgac
    21061 tctaaaactt gctccacttt cataaacata agttttgtta caaagttttg aaatttcatt
    21121 gatgattggc ataaaaagcg agctatcaaa attgctaaat ttaccttctt taattgctgt
    21181 tactctttca agccccattc ctgtatcaat acttggcttt ggcagtgggc taagcactcc
    21241 atcagcactt ctttcatatt gcataaaaac aagattccag atttctaaaa atctatctcc
    21301 atctccgccc atataatctt cgcttgagtt aaaatgctct tgtccttggt cataaaaaat
    21361 ctcactgcaa ggaccacaag gaccagtatc gcccatttgc cagaagttat ctttatcacc
    21421 aaatttgtaa attctttctt tttgaatgtg tttttgccat agattaaaag cttcatcatc
    21481 gttttcatgc acagttacat aaagtctatc tttaggtagt tttaaaactt cagttacaaa
    21541 ttcccaagca taagctatgg cttgttcttt aaaataatct ccaaaactaa aattcccaag
    21601 catttcaaaa aaagtatgat ggcgtgcggt atatcctaca ttatctaagt cattgtgctt
    21661 tccacccgct cttatacaag tttgacagct tgttttgcgt ggagggtttg ggcgtggaat
    21721 ttctcctgta aatatacttt taaaaggcac catacccgca ttggtaaaaa gtaaagttgc
    21781 atcatcagga actaaaggac ttgacggggt tatctcatgt ccttttgatg caaaaaaatc
    21841 caaataagct tttctgatat ccatgaattt tcctaaagaa atttttataa aaacatatca
    21901 taccaaaatt actttaaatt aagtaaaact aaaatacaat aaacattttt atttaatttt
    21961 atttctctaa ggttttttat gaattttatc aatcttcaag cccaatatct cgcatacaaa
    22021 gatgaaatca atgctgaaat tgaaagcgtt ttatcaagct cttctttcat aggcggtgca
    22081 aagcttaacg aatttgagca aaatttagct catttcttag gtgttaaaca cgctataggt
    22141 tgctcaagtg gaactagtgc tttatacctt gccttaagag tcttagatat tggtaaagat
    22201 gatgaagtta tagtgcctag ttttactttc atagcaacag ctgaagttgt ggccttggta
    22261 ggtgcaaaac ctgtttttgc agatataaat ttatcaaatt acaatcttga ttttaaagca
    22321 gtgcaaaaag caataacttc aaaaactaaa gctgttatag cagtgagtat gtttggacaa
    22381 atgagtgatt taagggcttt agaagaaatt ttaaaagata aaaatatcac tttgatcgaa
    22441 gatggtgcac aaagttttgg cgcaagtttc aaaggagaaa aatcctgctc tatagctaaa
    22501 atttcatgca caagcttttt tccttcgaag cctttgggag cttatggcga tggcggggct
    22561 attttttgcc atgatgatga aattgctaaa aaaataagaa ttttactcaa tcacggacaa
    22621 actcagcgtt ataaacatga atttataggt ataaatggac gccttgacac cttacaagca
    22681 gcgattttaa atgttaagtt aaaataccta gaaaaagaat tagacaaaag acaaaaatta
    22741 gcacaaattt ataatgcaaa tttaaaaaac tgtcaaattc cacaaattaa tccaaatgct
    22801 tttagcgctt atgcacaata cagtgtttta gttgaagata gagctagtgt attgcgaaaa
    22861 tttgaaaaag ctaatatacc ttatgctata cactatccaa cccctttgca taaacaacct
    22921 tgctttagtg agttttcaaa tttagaactt aaaaattcag aatacgcaag cgaacacatc
    22981 ttatctttgc ctttttcacc ttttttaagt gaagaagagc aagagcaagt tatttgtatt
    23041 tttaaagatt aattccatga aaataggtat cataggtctt ggaaaaatgg ggcaaaacca
    23101 cttaaatgaa cttagtaaaa attctcattt taaacttaat gcactttttg acctttgcaa
    23161 aaatccaaac ctaaatattt ttgatgatat tttttatgat gatttggata aatttttaaa
    23221 tcaaaataat gatattatca tcatagcaac acctacaaat tcacatttaa caatagcaaa
    23281 aaaagttttt aaacaatgca aatgcgtttt aatcgaaaag cctttagctc taaatttaaa
    23341 agaaatagac gaaatttcaa atttagctaa agaatacagc ataaaagtag gtgtaggttt
    23401 ttgtgaaaga tttaatcctg cggttttagc cctaaaaaaa gagcttgaaa atgaagaaat
    23461 tatcagcatt aacatacaaa gattttcacc ctacccacaa agaatcagcg atgtagggat
    23521 tttgcaagat ttggctgtgc atgatcttga tttgctttgt tttttaagca aacaagaaat
    23581 aacaaaaacc aatttgctta aaaaatacac ccaagatcaa acaagagaaa gtgaaagcat
    23641 tattctatgt gggcttgaaa aatgtattgc tagcatacat caaagttgga atagcacaca
    23701 aaaactaaga aaaattcatc ttattactaa aaatcatttt tatgaagcca atttaaatga
    23761 cttttcttta ttaaaagatg gaaattttat agaacttact caacaaagtc cacttttttc
    23821 agaacacgaa gctttgttaa aacttatcga taatcaaccc aatcatttag ccagcacgag
    23881 cgatgcttac aaagttcaag aaattttaga aaggtttgcg tgaaattagt tttattttta
    23941 aatatgggcg gagctacgaa tttacaagat tgtgaagttt ttttaaaaaa tatgtttaat
    24001 gatccttata ttttaggaat caaaaatcga tttttaagaa aatttgtagc atggatcata
    24061 acaaaggctc gcgttaaagc catgcaagaa aactataaaa aaatgggcgg aaaatcccct
    24121 ttaaacgaac ttactcaaag cctgtgtgac aagcttaatt taaaacaaga tgaatttaaa
    24181 tttgattttg taaatcttta tgttcctcct tttgccacag aaattttgca aaaatacact
    24241 ttaaatgcaa gtgatgaaat cattcttttt ccactttatc cgcaccattc ttgcaccaca
    24301 gtaacttcat ctttagaagt tctgcaaaat gaaatttcaa agcaaaaaat tcaagcaaaa
    24361 gtaaaaacta tagatatttt ttacaaaaat gagctttata acgagatgat agtttcgcac
    24421 attttggcta aaaaaagtaa atttgatgcc aaaattttga ttttttcagc gcattcttta
    24481 ccacaaagca ttattgacaa aggtgattta tatgaaaagc atgtaaatga tcatgtagaa
    24541 attttaaaag aaaagctaaa agatcatttt gatgaattta ttttagctta tcagtctaaa
    24601 ctaggccctg taaaatggct tgaaccaaat acaagcgatg ttttggcaaa tttaaacgat
    24661 aaagctctga tttaccctat ttctttttgc attgattgtt ctgaaacgat ttttgaacta
    24721 ggtatggagt ataaacattt atcaaaatac aattatgatt tgataagttg ccctaatgat
    24781 agtgatgaat ttatggaatt tattttaaag tatttatctg atcttaacta agaatgaatt
    24841 tgagaacctt gtctatcatt tttttaaact tttttggtaa aaatttagcc gactaaacca
    24901 aagtataagc tttttctccg tgcaaactca catctaagcc tttttgttct acttcttttt
    24961 tcactcttaa gtctgtaaaa caagaaatga tcttaaaaaa taataaagct tatgagagct
    25021 aaaaaaatca tacaaatcat aatagtaaga atttgctctt ttaaaagctc taaacttcca
    25081 ctgataaaaa atccctccgc caagtgcatt tttggtaatc acattaggat ttgctttaac
    25141 acttgcaaaa agccctgtag cgattccttc acaaacacct ccgattccgt gcaaagaaaa
    25201 aacatctaaa gaatcatcct atttgagttt gtatttaata aaactcaaac taaaataaca
    25261 aaatgcagaa gacaaagcca ctataacaag aaaagcataa ttatctacat aaccgcaagc
    25321 tggagtaatc cctacaagcc cactaagccc acctaaaata gtcggttttt atagatgagc
    25381 cctcaagcac tacccaagat aaaaagccac aagctgctga tataatactt actataaaag
    25441 cattgatagc aatatcattc atttcgccag cacttccagc attaaaaccc agccatccta
    25501 taaaaagcaa aatcacacct aagaaagcat aagaaataga atgcgcgttt ttatcctcat
    25561 catcactttt tctagcaccc actatcaaag ctcctacaag tccagcaacc ccagagctaa
    25621 tatacacaac accaccccca gcaaaatcaa ggcttcctct tttaagtaaa aacccttcgc
    25681 tactccaaat catatgcgct aacacatcat aaactaaagt actccaaaaa agtaaaaata
    25741 tcaccaaaac acccagttta attcttccaa ccaaagagcc tgttatgatg gcagatgcaa
    25801 taagtgcaaa catcatttga aaaatcataa aaagaatatt tgaaacacct gaagcattat
    25861 atccgctaat accctctaag agaaaattct cgaaatttcc tacaagccca agtccttcat
    25921 ctttgccaaa agaaaagcta aatccaagca ctacccattg taaagtaatg acaccaaaag
    25981 caataaagca attcattatg gtattgagag tatttttact tcttaccata cccgaataaa
    26041 cattgccaaa gttggagtta taagcaaaac tagtaaagta cacaacacaa taaaacttga
    26101 atttatcgta ttcatttact taccctttct tacaaaatat acttgcgaga taatta
//
LOCUS       DAPIYB010000013        25818 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.013, whole genome shotgun sequence.
ACCESSION   DAPIYB010000013 DAPIYB010000000
VERSION     DAPIYB010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25818
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.013"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..719)
                     /locus_tag="RJ318_000420"
     CDS             complement(<1..719)
                     /locus_tag="RJ318_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HDV7430317.1"
                     /translation="MLGIDLGSNTLRAVQMDEKLNKLKEYEFVIGAAKNLNQSGEISK
                     EAIQRLKNTLSILAKEQDLSKVRAVATAAFRKASNTNEIFAHLKKEFGIDFKLIDAKS
                     EAKISVLGMQSGLRRLKIWGEFAYCDLGGASCELSFGKSFKSFDFGIISFYEKNCHSY
                     YKTCISYKKLIKKYPKFIINIKDKKLKIHFLIANPYLKHLAFRAFDEVAMIKKELCSL
                     GAKTVVLNSGVPTTLSALKQN"
     gene            775..1548
                     /locus_tag="RJ318_000421"
     CDS             775..1548
                     /locus_tag="RJ318_000421"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HDV7430318.1"
                     /translation="MLLGVNIDHIAVLRQARMVNDPDLLEAAFIVARHGDQITLHVRE
                     DRRHAQDFDLENIIKFCKSPVNLECALNDEILNLALKLKPHRVTLVPEKREELTTEGG
                     LCLNHAKLKQSIEKLQNANIEVSLFINPSLEDIEKSKILKAQFIELHTGHYANLHNAL
                     FSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKGLELGLKVAAGHGLNYKNVK
                     PVVKIKEICELNIGQSIVARSVFTGLQNAILEMKELIKR"
     gene            1545..2639
                     /gene="pdxA"
                     /locus_tag="RJ318_000422"
     CDS             1545..2639
                     /gene="pdxA"
                     /locus_tag="RJ318_000422"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HDV7430319.1"
                     /translation="MKKLAISIGDINSIGLEILVRSHEELSKICTPFYFIHESLLNKA
                     LKLLNLKLFNAKIVAFKDDKDYEFNFIKKENSLEIYSFCLPLGFKVDENFEIQAGEID
                     AKSGLYGFLSFKAASYFVYEKHAHALLTLPIHKKAWEDAGLKYKGHTDALRDFFKKNA
                     IMMLGCKELFVGLFSEHIPLAKVSKKITFKNLSIFLKDFYKETHFKKMGLLGFNPHAG
                     DYGVIGGEEEKIMEKAIAFVNAFLHSKKDEKFFKKALKDENLQKELLLNFKGKGVYLP
                     YPLVADTAFTKTGLKNCNRLVAMYHDLALAPLKALYFDKSINVSLNLPIIRVSVDHGT
                     AFDKAYKNAKINTKSYFEAAKFAINLHSKA"
     gene            complement(2629..3231)
                     /locus_tag="RJ318_000423"
     CDS             complement(2629..3231)
                     /locus_tag="RJ318_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430320.1"
                     /translation="MKKIILLLGLSLASLGALSFDELIYKDEVKPSFDCSKIKYDGKS
                     DDELMICNKIGVRNEFDNKKLALVDNIYSSLYQNISKKADKKMKKDFKAISKKMLKER
                     KICIKNMQNTKAGENPLLSLLNASDCMQEAYIKVLLELMQRAKKDTKTKEVLEQIFKN
                     KVDKYENLLTQSLNTNKDLQDFIDSLAKEDLIDSRAKFKL"
     gene            3344..4543
                     /locus_tag="RJ318_000424"
     CDS             3344..4543
                     /locus_tag="RJ318_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7430321.1"
                     /translation="MQNYKKALFALALSAFCMGVTEFVMAGVLVDVEAYFSVDAKTAG
                     YLTTLYAIGVVIGAPLITIPLSRFHRHTQLLINLGIFALANFIIFFSQNFYLTAFARF
                     IAGTQHGVFFVIATLAVSAITPDDKKSSALAIMVTGLTVALVTGVPLGTFIGHYFGFK
                     FIFLLIFIITSLAFFGVWHMMPKNLHPSPTNLKNLIPAFSHQNLLKTYTITICSCGAQ
                     FVLYTYLQKILVEISGFKVQDTAYILLLYGICAICGNLWGGKIVDKKGAIFSLRLILS
                     IQVLVFLSVFLTMHSKILIIFSVALIGFFAFSTIPALKMLSITKAKRHTYKVIDSTVS
                     VNEAAFNVGIALASFLGGIVLARLGIEFNALFSALFVSPALIFALLFAKDKLNYKKFQ
                     RKSFTKV"
     gene            4599..4919
                     /gene="ciaC"
                     /locus_tag="RJ318_000425"
     CDS             4599..4919
                     /gene="ciaC"
                     /locus_tag="RJ318_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion antigen CiaC"
                     /protein_id="HDV7430322.1"
                     /translation="MVVDNTQKTSNAIFSTTTKVKEKNTSADEFQATLNEVKNKEEKE
                     DKKTNSSKFTNEDIDLGAVREDFRSYAWQKMREDQYKKNEETLLNKLFTTIDAGNATN
                     NTKA"
     gene            5103..6125
                     /locus_tag="RJ318_000426"
     CDS             5103..6125
                     /locus_tag="RJ318_000426"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDV7430323.1"
                     /translation="MIFIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLC
                     KDYKKASEVSLQPIDILDVDAAIIFSDILVVPLEMGMNLRFEKGEGPVFGNPISTLED
                     LEKLDDQNAHKKLNYVYDALKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAK
                     CKKMLYQNPELLHKILNKLTQVLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSF
                     NYMLEISNFIKSKYPNIPVILFPKGISGYLDRIDGNFDVFGVDWSTPLDLARDKLSHK
                     YTLQGNMEPCRLYDKNAIKEGVEKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLV
                     QESSAK"
     gene            6122..7024
                     /locus_tag="RJ318_000427"
     CDS             6122..7024
                     /locus_tag="RJ318_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDV7430324.1"
                     /translation="MKILFGPVSSRRFGRSLGIDLSPSKKQCNFDCVYCELDPKKAQE
                     KQDEIISIDKIISEVKAMLEKNVEFDFLTLTANGEPSLYPYLNELILSLRSIAKDKKL
                     LILSNGTAVLDEDKFNALLKLDVVKFSLDSAVAKTFYRIDRALKNIDLEKMIEKMADF
                     RARFNGDLIMEILVVKDLNDNEEEFEALNQALKKIMPLRVDLSTIDRPPAYAVKKVSE
                     EKLLELSKLIDSTPVLLAKRHYEGEKLSFNEEELLKMLHLRSQSEIDIEVKFDEQSKT
                     LLNQLIKEKKVKILDLAGVKFYKV"
     gene            complement(7021..8217)
                     /locus_tag="RJ318_000428"
     CDS             complement(7021..8217)
                     /locus_tag="RJ318_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430325.1"
                     /translation="MILAGIIFIFNLILAYLSIDISKLDSVTEQLKIGMFSSIFVLSL
                     TLFIFAFRQNRNINKIYQKIFCMQNDFLNFQKKIDVDSALDLLKEKFETTSQNLTKIS
                     HEKDRYLHLLEENLYQLINISNAMRCLNEGYNKEINSLILNALNSQKDQIRLELNEAL
                     EHHKSIIGTSHGKVLQFEASVAIVNNDELENFLLANLLSYFGIESTCFKNLSFDVNDF
                     HLIFIKDKIFNKNVKKNYDFIVMGRHKNTHYEYFLTLPFEKKDLENILQNKLDKVCTL
                     KFKTPYQNNVLLFKQNDFDATLFFNIIEKQCDKNICINSFSQLKQELSKETYRLILLD
                     YELIKFDLEQMRNLLSAYKKQHPQSHIIFFSKEKVRDFDCVSEVLSDVSRNDLITLLR
                     KYLPKA"
     gene            complement(8219..10021)
                     /gene="uvrC"
                     /locus_tag="RJ318_000429"
     CDS             complement(8219..10021)
                     /gene="uvrC"
                     /locus_tag="RJ318_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDV7430326.1"
                     /translation="MTKENLENELKTLPNSTGVYQYFNQEGKLLYVGKAKNLKNRVRS
                     YFAFTPNLHANPRNSLRIQKMIEETVHLEFIATNSEADALILENSFIKQLHPKYNILL
                     RDDKTYPYIYVDFEEEFPRFEITRKLVKKSKIKYFGPFFKGARELLDALYLYYPLKQK
                     ASCKSPCIFYQISRCLAPCDKLISREKYLEILDEAIHALLNPSVLLKNLEKQMLVLAQ
                     NENYEEAAKVRDQIAMIKDLEVKVEIDIAKLEDFEVFALAFKNSVLSTLRFVVQNGKI
                     ISANSKITPIKNDIQWDQNEIYKQLILENFSMDIPLLANVIYVYEEFEDRVLLEEILS
                     QRFDKKISIKIPKIGEKRRICDLAFQNALLNIEKEQKNHDFTIQKELKSYFELENLPN
                     DIEIFDNSHLQGVANVGAMVTYRINSWDKSKYRKFHLKHKNDYDQMREVLTRRALDFD
                     KIPPPDLWLIDGGKALLDLAKEIIVSSGANVDILAISKEKIDAKAHRAKGGAKDKIHS
                     LKGEFSLSINDKKLQFLQKLRDEAHRFAISFHQNTKKKQDLKSSKLANLGLSSGVMQK
                     LLAYYGNFESIYKADFKDLTMLVGRKAAQKIKEN"
     gene            complement(10014..10508)
                     /locus_tag="RJ318_000430"
     CDS             complement(10014..10508)
                     /locus_tag="RJ318_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430327.1"
                     /translation="MGKRNNIKMTKNASAVINELMDKPHYKPLKTLFFCKDFLSSFPL
                     AKQRLIAKIYVKNHILNIITLHPAAYQELNHDDSKIYIKFLIKAYGQKYPLSGFVDIK
                     DIKIFSQKYTYAANKNKNDEKLSKNSYLELSKGEFKNCFKDKKLFKKFEDLRELIKKG
                     SNLD"
     gene            10647..12182
                     /gene="guaA"
                     /locus_tag="RJ318_000431"
     CDS             10647..12182
                     /gene="guaA"
                     /locus_tag="RJ318_000431"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDV7430328.1"
                     /translation="MKKADILVLDFGSQYTQLIARRLREQGVYAEILPFNVSLADIKA
                     KEPKGIILSGGPASVYATDAYFCDKGIFDLNLPVLGICYGMQLMAHHYKATVAPAGHK
                     EYGKANIEIKKDNALFKNLPKKQTVWMSHSDKVENLPQGFEVLATSENSPFCVFGNED
                     KKFFALQFHPEVQHSEFGKNILKNFAKYACNCESIWNMGSFAKTQAEKIREEVGNDKV
                     LCAVSGGVDSSVVAALLASAIKEQIIVVFVDNGLLRSGEKEQVEFMFKNTLGIDLISI
                     DASEIFLSRLVNVTDPEQKRKIIGNTFIEVFEEEAKKHKDVKYLAQGTLYTDIIESSV
                     VGASKTIKSHHNVGGLPEKMNLKLIEPLKEIFKDEVRALGLELGLSKEVVYRHPFPGP
                     GLAIRIMGEVNRASLELLRKADVILLEELKSTGWYDKTWQAFCVLLNVKSVGVMGDNR
                     TYDNAVCIRVVDASDGMTATFSHLPYEILENISRRIINEVEGINRVVYDISSKPPATI
                     EWE"
     gene            12268..13728
                     /locus_tag="RJ318_000432"
     CDS             12268..13728
                     /locus_tag="RJ318_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430329.1"
                     /translation="MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGML
                     VEFRTLSSEKKAEDGKLVQTSKTITGIKPSKFQEFKEGDFITEHDFWKTDNDDELEDL
                     QNSRRSAYITELYRTTDFDTIEKIPLSFTIPQAIQKYFAHEILSVETLQANLQDEKEI
                     PCILDYLILKRFLFKAYDTLIFMDNSIDQTQFSALKSIMMHLENSYKQMMADQKPNIT
                     KIFNETFLSLQCHYQALVATIDTRKNRLASLEAQMKTLQSEINLKSNATDADPEKLKA
                     RQERLAKLQKEAEYYRTTLKRLDAIREDFYKKNYNIFENAFKLSREKLFKKIVTGLNL
                     CATIMDVKIWHLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKSALNPFDQKL
                     LVYIQKITKEQRKKFLVVTSDLDLLCKLKIENFSQNPYYLVKYAPKKVNYQSLMRDNT
                     FDIVYIDEKHVWENVADIILQGKHFDKSGKTKFKLI"
     gene            13968..15218
                     /gene="purD"
                     /locus_tag="RJ318_000433"
     CDS             13968..15218
                     /gene="purD"
                     /locus_tag="RJ318_000433"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDV7430330.1"
                     /translation="MKIMILGSGAREYSIALALRRVDKNLEFYFAPGNGATESLGTNL
                     NLKDPVVLATYAKEKGFDLCIVGSESFLAEGVVDIFKQQGLAIFGPSKAAAMLETSKS
                     FMKSFLKKYRIKTAKFLNTNDIEKAKNFIYSLTPPIVVKADGLCAGKGVIIAKTHEEA
                     IEETAKMLSGESFGDAGKLVVIEEFLDGYELSIFAVCDGNDFVLLPAAQDHKKLLDND
                     QGPNTGGMGAYAPSSLANESLLRKVQKDIILPTLAGMKKEGAEFCGVLFIGAMIVGNK
                     PYVLEFNVRFGDPECEVLMPLIEDPLELILAATQRRLRHSKIKIKKEFAVGVVCASEN
                     YPYKSSPKSEITVNNIPENSHISYAGVSLEDGKLMADGGRVLVCVGTGKSIEEAQKNA
                     YKLCDNVNFKGKQYRKDIAHQVLK"
     gene            15215..15667
                     /locus_tag="RJ318_000434"
     CDS             15215..15667
                     /locus_tag="RJ318_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDV7430331.1"
                     /translation="MKENLQDRLERENLKIASFGKRVLAFLIDDMVISLIVFIIFYDR
                     LIQAKDLFETTQIVGNFYLGFILLHFSYQAIFTYLYGASLGKILCKIIILDENLLDKP
                     NLIQSCIRSAVRQVSAMAFMLGFAWALSNDLRKAWEDYLARTIVVDVA"
     gene            15657..17705
                     /locus_tag="RJ318_000435"
     CDS             15657..17705
                     /locus_tag="RJ318_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HDV7430332.1"
                     /translation="MWRKFSLLLGTSIALNAAQVDIYALDAKKEGDILTANNDVIIFS
                     DFYFITANKAIYNEKTGDVELFGDVNILRGQNERSHSDYAKINLNSNQADFSNFFFSN
                     NNLEVWFQSKTSHLNDKVFESKVSAVSSCNVEDPDWEIRFSKGWLNRETNFVHLYNAR
                     LYVKNTPVFYLPYFGFSADTHRQSGLLIPKIVLKSSEGLYYEQPIYIATQENWDLELD
                     PQIRTNRGFGLYSTLRFLDSPYSTGELNFGAFRENSSYFHDENLKNQTHYGIELKYSR
                     DDLIKSLLSDNFQEGLWIDATYLNDVDYLNLGSRDYRDLNSLVTSKINYFLADENNFY
                     GAYARYYIDTSKLSNNTTLQEYPSFQYHRFLNNLFDERLRYSFDASFHNFYRPAGSYA
                     NELNLDLPISYHNAFFGDFLHFTFTERFYASFVNYSNDPERNHEHYFRNTHDFNLYTD
                     LSKAYENFFHTLNLGVNYILPGAKSGKITQDYLEEYDKENEHTSLYTVQYFYNNEGQK
                     KLKHRISLDYLNKQNEFYELENLLTYYFNENINLNSEVLYSYEQSRFTNVISQIEVNT
                     NSKFNWMFSHAYQNDEYGKYSFIGTRANYIATPNYNLFGGIWFDTQRAHANMWELGYT
                     YQRKCWNYSLMYRERIDPQLTSGGITAKNQSGVYFIFNFYPLGGVKYDFSLAESENKI
                     "
     gene            17775..19934
                     /locus_tag="RJ318_000436"
     CDS             17775..19934
                     /locus_tag="RJ318_000436"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDV7430333.1"
                     /translation="MQYSIEINKNTEIFDIDKVAKQAAGAVLMRQGKSVVLATVAREE
                     KQVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGY
                     AYPTQIVVMVLSADPKVDLQVMSLNAASVALYLSDIPMKAPVCGVRIGKIDGNFILNP
                     NNEELQNSTLDLYVAGVKDELLMIEMRALPDQKENEIFIEAPYADVLTQTTSQNMNEL
                     SEDEILEALNLAQKAILNGSNAYEEAFSKHKKNSQIELKNEIEHPEILAFIENNFQKQ
                     IKEAINQMAKSERASELNKIAKEILNLEITKDWSEESVLNTLAKVKRKLIREQILNEG
                     KRADGRSLNEVRPISIETNILPNAHGSCLFTRGQTQALVVATLGGENDSQMIDLLTEK
                     NPISERFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSVDENYPYVIRLVS
                     EILESNGSSSMATVCGGSLALKAAGVPSLKLVAGVAMGLIFEDNKYAVLTDIMGLEDH
                     DGDMDFKVAGSKDGVTALQMDIKLGGIDQEILKQALYQAKEGRIHILNIMEEAAKEII
                     VNEEVLPKLELFSVDPSKIVDIIGQAGKTIKEIVEKFGVSIDLDREKGEVKIAGSQNE
                     QIKAAKDYIINITSSQKGTKKGPKDKDISGFELGQEFQGIVKKIAPFGAFVELKNGVD
                     GLLHSSKIKHLNLSENQSLKVKISEIKNGKISVDLCE"
     gene            19931..20413
                     /locus_tag="RJ318_000437"
     CDS             19931..20413
                     /locus_tag="RJ318_000437"
                     /EC_number="3.2.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-deoxyinosine glycosylase"
                     /protein_id="HDV7430334.1"
                     /translation="MSEFLTHPFEPFFDKDSKILILGSFPSIKSRQDGFYYQHPRNRF
                     WPILETLFNAKLENITEQQAFLRKKHIALWDVLQSCKIKNSDDKTISYAKANDLNLIL
                     SQTKIQAIFTTGQSAYRFFVKFHPRLEAIALPSTSPANLNFSFEQLLQNYEIIKKFTK
                     "
     gene            20471..20680
                     /locus_tag="RJ318_000438"
     CDS             20471..20680
                     /locus_tag="RJ318_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HDV7430335.1"
                     /translation="MPFVNIRITKENGEPTTEQKQELIAGVTDLLAKVLNKNKSSTVV
                     IIDEIDTDNYGLGGKSITQARKEKS"
     gene            complement(20677..21339)
                     /locus_tag="RJ318_000439"
     CDS             complement(20677..21339)
                     /locus_tag="RJ318_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HDV7430336.1"
                     /translation="MEMILFVLVMILLVLLFVVLFRQYKSPKIEEKSTQSFSDIMQLK
                     SIGELSVFQVFSKEIVTKKDSAFNGIWKNLLGWSLSERQIALIFEFEITFLYDLRDKN
                     FDILPLGDDAYKIIMPECRYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDK
                     NKLIKEAKDEVKDLSLNLIQNLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLD
                     VS"
     gene            complement(21357..22541)
                     /locus_tag="RJ318_000440"
     CDS             complement(21357..22541)
                     /locus_tag="RJ318_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7430337.1"
                     /translation="MENFNRTLLVCWFGVFTTSMGLSQIAPILPFYIKELGHVDTSEI
                     AFYSGLAFGITPLFMAVFSPLWAFLGAKYGYKNMLLRASFGMSVLTLWLSFAHSALEV
                     VFVRGLTGIISGFTSAAVVFIAVIAPKEKVAYALGTLSTASISGSLLGPLFGGFVAEF
                     FSISTVFDMVAFLIACSFVTIYFFIHERKIQKEAKKNTQKVKENKTLIIVLFITTFVI
                     QFGTFGVMPILSIYVEQIHQGGNLALWAGIVVAASGISNLFFAPKLGKIADKIGPSKI
                     IFGALIFCGICFYLQAVASNVYTLIFVRLLIGVGLGGLLPCVNALLKKSVSAKNLSVI
                     FGFNQTCQFLGNFCGAFGGGLMASHFSVEFVFTFVCLIFIINAFIFLAFEKKYIFSNQ
                     GL"
     gene            22595..23050
                     /locus_tag="RJ318_000441"
     CDS             22595..23050
                     /locus_tag="RJ318_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HDV7430338.1"
                     /translation="MKKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFISSAGTSG
                     EHDGEGMHYGTKNKLAQLNIEHKNFTSKKLTQKLCDESDFLITMDNSNFKNVLKNFTN
                     TQNKVLKITDFSPSLNYDEVPDPWYSGNFDETYKILSLACKNLLVFLSK"
     gene            23302..24579
                     /locus_tag="RJ318_000442"
     CDS             23302..24579
                     /locus_tag="RJ318_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane protein"
                     /protein_id="HDV7430339.1"
                     /translation="MKLVKLSLVAALAAGAFSAANATPLEEAIKDVDVSGVLRYRYDT
                     GNFDKNFVNNSNLNNNKQDHKYRAQVNFSAAIADNFKAFIQFDYNAVDGGTGVNNVKN
                     AEKGLFVRQLYLTYTNEDVATSVIAGKQQLNLIWTDNAIDGLVGTGVKVVNNSIDGLT
                     LAAFAADSFMAAEQGADLLGHSNISTTSNQAPFKVDSVGNLYGAAAVGSYDLAGGQFN
                     PQLWLAYWDQVAFFYAVDAAYSTTIFDGINWTLEGAYLGNSLDSELDDKTHANGNLFA
                     LKGSIEVNGWDASLGGLYYGDKEKASTVVIEDQGNLGSLLAGEEIFYTTGSRLNGDTG
                     RNIFGYVTGGYTFNETVRVGADFVYGGTKTEAAANHLGGGKKLEAVARVDYKYSPKLN
                     FSAFYSYVNLDQGVNTNESADHSTVRLQALYKF"
     gene            complement(24694..25818)
                     /gene="dnaJ"
                     /locus_tag="RJ318_000443"
     CDS             complement(24694..25818)
                     /gene="dnaJ"
                     /locus_tag="RJ318_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDV7430340.1"
                     /translation="MEISYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAED
                     KFKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSNSSGFGGFEDLGDIFSSFFGEG
                     FGSSSRRRKSSNDEKIPSDFIVNLKLSFKEAVFGCKKNIDFTYKCSCKTCNGTGAKDG
                     KLQTCPKCQGRGQVGVSQGFITFAQTCPDCQGIGEKASEKCSDCKGLGYNESKDSVEL
                     NIPEGVDTGMKLRVNAKGNILKNGTRGDMYVKIIAAEDDTFIRDDDDIYIEFPVFFTQ
                     AILGQSIKVPTIRGEATLNLPKGAKDGQRFVLEKEGVKDVHSSRMGNQIVQISIKFPT
                     SLNDEQKELLEKLSESFGIKDGMHQEQKGLFEKITNWFKS"
BASE COUNT         9235 a         4208 c         3947 g         8428 t
ORIGIN      
        1 atattttgtt ttaatgcgct aagtgtggta ggaactccgg aatttaaaac caccgtttta
       61 gcccctaaag aacaaagttc ctttttaatc atagccacct catcaaaagc cctaaaagct
      121 agatgcttta aatagggatt tgcaattaaa aaatgaattt taagtttttt atctttaata
      181 tttatgataa atttaggata tttttttatc aattttttat aagaaataca agttttataa
      241 taagaatggc aatttttttc ataaaaacta ataataccaa aatcaaaact tttaaaactt
      301 tttccaaaag aaagctcaca agaagcccct cctaaatcac aatacgcaaa ctctccccaa
      361 attttaagcc ttcttaaacc tgattgcata cctaaaacac taatcttagc ttcacttttg
      421 gcatctataa gcttaaaatc aatcccaaat tcttttttta aatgggcaaa aatttcattt
      481 gtattgcttg cctttctaaa agctgcagtc gctacagctc tcactttact taaatcttgc
      541 tctttagcta aaatactcaa agtatttttt aatctttgta tggcttcttt agaaatttct
      601 ccactttgat ttagattttt cgctgcccca ataacaaatt catattcttt taatttattt
      661 aatttttcat ccatttgtac tgctcttaaa gtatttgaac caagatctat acctaacatg
      721 actttcctta tttgatttta tagtataata gcaaaaaagt tctaaaggaa aaatatgctt
      781 ttaggtgtaa atatcgatca tattgcagtg ttaagacaag ctagaatggt aaatgatcct
      841 gatcttttag aagctgcttt tatagtagct agacacggag atcaaatcac tttgcatgta
      901 agagaagatc gccgtcatgc tcaggatttt gacttggaaa atattataaa attttgcaaa
      961 agccctgtca atttagaatg tgctttaaat gatgaaattt taaatttagc tcttaaactc
     1021 aaaccccacc gcgttacttt agtgcctgaa aaaagagaag agcttactac agaagggggg
     1081 ctttgtttaa atcatgctaa attaaaacaa agcatagaaa aacttcaaaa tgcaaacatt
     1141 gaagtttcac tttttatcaa tcctagttta gaagatatag aaaaatcaaa aattttaaaa
     1201 gcccaattta tagagcttca tacaggacat tatgcgaatt tacacaacgc actttttagc
     1261 aatatctctc atactgcttt tgccttaaaa gaacttgatc aagataaaaa aaccttgcaa
     1321 gctcaatttg aaaaagaatt acaaaattta gaactctgtg ccaaaaaagg cctagaactt
     1381 ggcttaaaag tagccgcggg acatggttta aattacaaaa atgtaaaacc cgtagtaaaa
     1441 attaaagaaa tttgcgagct aaatatagga caaagcattg tagcaagatc tgtatttaca
     1501 ggacttcaaa acgctatttt ggaaatgaaa gaacttatta aaagatgaaa aaactagcca
     1561 ttagtatagg cgatataaac agcataggac ttgaaatttt agtgcgttct catgaagaac
     1621 taagcaaaat ctgcacacct ttttatttta tccacgaaag cttacttaat aaagctttaa
     1681 aacttttaaa tttaaaactt tttaatgcaa aaatcgtagc ttttaaagat gacaaagact
     1741 atgagtttaa ttttataaaa aaagaaaatt ctcttgaaat ttactctttt tgccttcctt
     1801 taggctttaa agtggatgaa aattttgaaa tccaagccgg agaaatagat gcaaaaagtg
     1861 gactttatgg ttttttaagc tttaaggcgg caagttattt tgtctatgaa aaacacgccc
     1921 atgccttact tactctacct atacacaaaa aagcttggga agatgcagga cttaaataca
     1981 aaggacacac cgatgcttta agggattttt ttaaaaaaaa tgccattatg atgttaggtt
     2041 gcaaagaact ttttgtaggg ctttttagcg aacatatacc tttagctaaa gtgagtaaaa
     2101 aaatcacttt taaaaattta agtatctttt taaaagattt ttacaaagaa acgcatttta
     2161 aaaaaatggg gcttttaggt tttaatcctc acgctggaga ttatggagtt ataggtggag
     2221 aagaagaaaa gatcatggaa aaagctatag cctttgttaa tgccttttta cactctaaaa
     2281 aagatgaaaa atttttcaaa aaagccttaa aagatgaaaa tttacaaaaa gaattgcttt
     2341 taaattttaa aggcaagggc gtttatctac cctatccttt agtggctgat acagctttta
     2401 ctaagactgg tttaaaaaac tgcaatcgtt tagtggctat gtatcacgat cttgcccttg
     2461 ctcctttaaa ggccttgtat tttgataaaa gcatcaatgt aagtttaaat ttacctatca
     2521 tacgcgttag cgttgatcat ggcacggcct ttgataaggc ctataaaaat gctaaaatca
     2581 acactaaaag ttattttgaa gcggctaaat ttgcaatcaa tttacattct aaagcttaaa
     2641 tttagcccta gaatcaatca aatcttcttt agctaagctg tctataaaat cttgcaaatc
     2701 tttattggta tttaaacttt gagtgagtaa attttcatat ttatcaactt tatttttaaa
     2761 aatttgctct aaaacttctt tagtctttgt atcttttttt gctctttgca taagttctaa
     2821 taaaacctta atataagctt cttgcatgca atcacttgca ttgagtaaag ataaaagagg
     2881 attttcccct gcttttgtat tttgcatatt ttttatacaa atttttcttt ctttaagcat
     2941 cttttttgaa atggctttaa aatctttttt catcttttta tctgcttttt ttgaaatatt
     3001 ttgatataaa ctactataga tgttatctac taaagcaagt tttttattat caaattcatt
     3061 acgcacacca attttattgc atatcataag ttcatcatca cttttgccat catatttgat
     3121 tttagagcaa tcaaaactag gttttacttc atctttataa ataagctcat caaaactcaa
     3181 agcccctaaa ctcgccaaac ttaaaccaag caataaaata atttttttca ttatttacct
     3241 ttaaaatttt tattttattt taacaaaaat attttgaatt ttttaaggaa attaagcctt
     3301 tattttatta taatgcgttt ttatttttta taaggaactt aaaatgcaaa attacaaaaa
     3361 agctcttttt gcactagctc ttagtgcttt ttgtatgggc gtaactgaat ttgttatggc
     3421 aggagttttg gttgatgttg aagcgtattt tagcgtagat gcaaaaaccg cgggctatct
     3481 tacaacctta tatgctatag gtgttgttat aggtgctcct cttatcacca tacctttaag
     3541 tcgttttcat agacatacac aacttttaat caatcttgga atttttgctt tagcaaattt
     3601 catcatcttt tttagccaaa atttctatct tactgctttt gcacgcttta tagcaggaac
     3661 acaacatggg gtattttttg tcattgccac cttagctgta agtgctataa ctccagatga
     3721 taaaaaatca agtgctctag ctataatggt cacagggctt actgtagcct tagttactgg
     3781 agtgccgctt ggaactttta tagggcatta ttttggcttt aaatttatct ttttactcat
     3841 ttttatcatt acaagtctag cattttttgg agtatggcat atgatgccca aaaatttaca
     3901 tcctagccca accaatctta aaaatctaat ccctgctttt tctcatcaaa atttgttaaa
     3961 aacttatact ataaccattt gtagttgtgg ggctcaattt gttctttata cttatttgca
     4021 aaaaatactt gtagaaataa gcggttttaa agtccaagat acagcttata tcttgctttt
     4081 atatggaatt tgtgcaattt gtgggaattt atggggcgga aaaatagtag ataaaaaagg
     4141 tgctattttt tctttgcgtc ttattttaag catacaagtt ctagtatttt taagtgtatt
     4201 tctcaccatg cattctaaaa ttttaatcat ttttagcgta gctttgatag gattttttgc
     4261 cttttcaacc atacctgcac taaaaatgct tagcattact aaagctaaac gccatactta
     4321 taaagtcata gacagtacag taagtgtgaa tgaagcagct tttaatgtag gcatagcttt
     4381 agcaagtttt ttaggtggga ttgttttagc aagattgggt atagaattta atgctttatt
     4441 ttcagcactt tttgtaagcc ctgctttgat ttttgccttg ctttttgcca aagataaatt
     4501 aaattataaa aaatttcaaa gaaaaagttt tacaaaggta taaattggaa tagaaattgc
     4561 ttgcttattt aatgtaaagt taaataaagg aggagaaaat ggtagtagat aatactcaaa
     4621 aaacatcaaa tgctatcttt agcaccacaa ctaaagttaa agaaaaaaat acttcggcag
     4681 atgaatttca agccacatta aatgaagtaa aaaacaaaga agaaaaggaa gataaaaaaa
     4741 caaactcaag caaatttact aacgaagaca ttgatcttgg tgctgttaga gaagatttta
     4801 gatcttatgc ttggcaaaaa atgagagaag atcaatacaa aaaaaatgag gagactttgc
     4861 taaataagct ttttactaca attgacgcag gaaatgccac aaacaataca aaggcttaat
     4921 atacaaatca atcaaaactc aaactacata aacgagaatt ccaataattc tcgtaaaatt
     4981 tctaataact ctggataaaa tgaaaaaatt tattatttcc tctatatgaa gaaaatatag
     5041 aaaaattgac caatttaatt tatcaaattc tgttataatt ttgctaaaaa caaaggaaaa
     5101 taatgatttt tatcgatgct tgctttaaaa aacctacacc ctacacccct atttggatga
     5161 tgcgtcaagc aggaaggtat ttgccagaat atatggaagt aagaaaacaa gcgggtgatt
     5221 ttctctcttt atgcaaagac tataaaaaag cttctgaagt ttctttacag cctattgata
     5281 ttttagatgt agatgcagca atcatttttt cagatatctt agttgttcct cttgaaatgg
     5341 gtatgaattt acgttttgaa aaaggagaag ggcctgtttt tggtaatcct atttcaaccc
     5401 tagaagattt agaaaaactt gacgatcaaa atgcacataa aaaattaaat tatgtctatg
     5461 atgccttaaa gcttacaaga gaaaaattat ctcaaaacaa ggctttaata ggattttgcg
     5521 gaagcccttg gactatagct acctatatga tagaaggaag tggaagtaaa aattatgcaa
     5581 agtgtaaaaa aatgctttat caaaacccag aacttttaca taaaattcta aacaaactaa
     5641 ctcaagtttt aaaactttat ttagaagagc aaattaaagc aggtgctaat gctatacaaa
     5701 tttttgatag ctgggcaagt gctttagaat atgataagtt ttttgaattc tcttttaatt
     5761 atatgcttga aatttcaaat tttattaaaa gcaaataccc aaatatacct gtaattttat
     5821 tccctaaagg cattagcggt tatttggata gaatcgatgg caattttgat gtttttgggg
     5881 ttgattggag caccccgctt gatttagcac gtgataaact atcacacaaa tacactcttc
     5941 aaggcaacat ggagccttgc agactttatg ataaaaatgc catcaaagaa ggagtggaaa
     6001 aaatactaaa aaccatgcaa aataaagctc atattttcaa cttaggacat gggatcttgc
     6061 ctgatattcc tgttgaaaat gcaaaatatt ttatcaagct tgtacaagaa agttcagcta
     6121 aatgaaaata ctctttggtc ctgttagctc taggcgtttt ggaagatctt tgggtataga
     6181 tttaagccct agtaaaaaac aatgcaattt tgattgtgtt tactgcgagc ttgatccaaa
     6241 aaaagcccaa gaaaaacaag atgaaattat cagcatagat aaaattatct ctgaagttaa
     6301 agctatgctt gaaaaaaatg ttgaatttga ttttcttacc cttactgcca acggagagcc
     6361 tagtctttat ccttatttaa atgagcttat tttatcttta cgcagcattg ctaaagataa
     6421 aaaattgctt attttaagca atggtacagc tgtattagat gaagacaaat ttaatgcttt
     6481 gctaaaacta gatgtggtca aatttagcct agatagtgca gttgctaaaa ctttttatcg
     6541 tattgataga gctttaaaaa acattgactt agaaaaaatg atagaaaaaa tggcagattt
     6601 tagagctagg tttaatggag atttgattat ggaaattcta gttgttaaag atcttaatga
     6661 caacgaagaa gaatttgaag cacttaatca agctttaaaa aaaatcatgc ctttaagggt
     6721 tgatctaagc accatagata gacctcctgc ttatgctgtt aaaaaagtaa gcgaagaaaa
     6781 acttttagaa ctttctaaac ttatagattc tactcctgta ctcttagcca aaagacatta
     6841 tgaaggtgaa aaactaagct tcaatgaaga agaattatta aaaatgcttc atttgcgctc
     6901 acaaagcgaa atagacattg aagtgaaatt tgatgaacaa tccaaaactc tcttaaatca
     6961 acttatcaaa gaaaaaaagg taaaaattct cgatttagct ggagttaaat tttataaagt
     7021 ttaggccttt ggcaaatact ttctaagtaa agttataaga tcatttctac ttacatcact
     7081 taaaacttcg ctcacacaat caaaatccct aactttttcc tttgaaaaaa agatgatatg
     7141 gctttgtgga tgctgttttt tataagcact tagcaaattt ctcatttgct caagatcaaa
     7201 tttaattaat tcataatcaa gtaaaatcaa acgataagtc tccttgctta attcttgttt
     7261 taattgacta aaagaattta tacatatatt tttatcacat tgtttttcta ttatattaaa
     7321 aaacaaggtt gcatcaaaat cattttgttt aaaaagcaat acattatttt gataaggggt
     7381 tttaaatttt aaagtgcaaa ccttatcaag cttgttttgc aaaatatttt caagatcttt
     7441 tttttcaaaa ggtaaagtta aaaaatactc ataatgtgta tttttatgcc gacccatcac
     7501 tataaaatca taatttttct ttacattttt attgaaaatt ttatccttga taaaaatcaa
     7561 atgaaagtca ttaacatcaa aacttaaatt tttaaaacaa gtgctttcta tgccaaaata
     7621 cgaaagtaaa tttgcaagta aaaaattctc aagctcatca ttattaacta tggccacact
     7681 tgcttcaaat tgcaaaacct ttccatgaga tgttcctata atgcttttat gatgctctaa
     7741 agcctcattt aattctaatc taatttgatc tttttgagaa tttaaggcat ttaaaatcaa
     7801 agaattaatt tctttattat acccttcatt taagcaacgc attgcattag atatatttat
     7861 aagctgatat aaattttctt ccaataaatg caaatatcta tctttttcat gggatatttt
     7921 agttaaattt tggctcgtag tttcaaattt ttcctttaac aaatcaagcg cactatcaac
     7981 atcaatcttt ttttgaaaat ttaaaaaatc attttgcatg caaaaaattt tttgatatat
     8041 tttgtttata tttctatttt gcctaaaagc aaaaataaaa agtgttaaag ataaaacaaa
     8101 aatgctagaa aacataccta ttttcagttg ttcagtaaca ctatcaagct ttgagatatc
     8161 aatacttaaa tacgctaaaa ttagattaaa aataaaaatt atccctgcta atatcaaatc
     8221 aattttcctt tatcttttgc gccgctttcc tgcctacaag cattgtaaga tctttaaaat
     8281 cagccttata tatagattca aaatttccat aatacgctaa aagtttttgc ataacccctg
     8341 aactaagtcc taaatttgca agcttagaac ttttcaagtc ctgttttttc ttagtatttt
     8401 gatgaaagct aatagcaaaa cggtgtgctt catctcttaa tttctgtaag aattgtagtt
     8461 ttttatcgtt aatgcttaga ctaaattctc cttttaagga atgaatttta tccttagcac
     8521 cccctttagc tctatgtgct tttgcatcga ttttttcttt tgaaatagct aaaatatcga
     8581 catttgcccc actacttaca atgatttctt tagccaaatc aagcaaagcc tttcccccat
     8641 ctataagcca taaatcagga ggaggtattt tatcaaagtc caaagcccta cgcgttaaaa
     8701 cttcacgcat ttgatcatag tcatttttat gttttaaatg aaatttacga tattttgact
     8761 tatcccaaga atttattcta taagttacca tagctccaac atttgccacg ccttgcaaat
     8821 gagaattatc aaaaatttct atatcatttg gtaaattttc aagctcaaaa taagacttta
     8881 attctttttg tatagtaaaa tcatgatttt tttgctcttt ttctatattt aaaagggcat
     8941 tttgaaaagc caaatcacaa attcttcttt tttctcctat tttagggatt ttaatactga
     9001 tttttttatc aaacctttgg cttaaaattt cttctaaaag cactctatct tcaaattctt
     9061 cataaacata aataacattt gcaagcaaag gaatatccat gctaaaattt tctaaaatca
     9121 gttgcttata aatttcattt tgatcccatt gtatatcatt ttttatagga gtaatcttag
     9181 aatttgcact gataattttt ccattttgca ccacaaaacg caaggttgaa agcacggaat
     9241 ttttaaaagc taaagcaaat acttcaaaat cttctaattt tgcaatatct atttcaacct
     9301 taacttccaa atctttaatc attgcaatct gatctcttac tttagctgct tcttcgtaat
     9361 tttcattttg tgctaaaaca agcatttgtt tttctaagtt tttaagcaaa acactaggat
     9421 ttaaaagtgc gtgtatagcc tcatctaaaa tttcaaggta tttttccctg ctgatgagtt
     9481 tatcacaagg cgcaagacaa cgagaaattt gataaaaaat acaaggggat ttacaacttg
     9541 ctttttgctt taaaggatag tataaataaa gcgcatctaa aagctctcta gcgcctttaa
     9601 aaaaagggcc aaaatattta attttgcttt tttttactaa ttttctagtg atctcaaagc
     9661 gtggaaattc ttcttcaaaa tccacataaa tataaggata agttttatca tctcttagca
     9721 aaatattata ttttggatgc agttgtttga taaaagaatt ttctaaaatc aaagcatcag
     9781 cctctgaatt agtagcaata aattccaaat gcactgtttc ttcaatcatt ttttgaattc
     9841 ttaaagaatt tcttggattt gcatgtaaat ttggagtaaa agcaaaataa gatctaacac
     9901 gatttttaag atttttagcc ttgcctacat ataaaagctt tccttcttga ttgaagtatt
     9961 gataaacgcc agtactatta ggaagagttt ttaactcatt ttctaaattc tctttagtca
    10021 agattagaac ctttttttat aagctctctt aaatcttcaa atttcttaaa taatttttta
    10081 tctttaaagc aatttttaaa ttcaccctta gaaagctcca aataagaatt tttagagagt
    10141 ttttcatcat ttttgttttt atttgccgca taagtgtatt tttgagaaaa gatttttata
    10201 tcttttatat caacaaatcc acttaaagga tatttctgcc catatgcttt tatgagaaat
    10261 ttaatataaa ttttgctatc atcatgattt aattcttgat aagctgctgg atgtaaggtt
    10321 attatattta aaatatgatt ttttacataa attttagcaa tcaaacgttg cttagcaagc
    10381 ggaaaagaac ttaaaaaatc tttgcaaaaa aataaggttt ttaaaggctt ataatgaggt
    10441 ttatccatca attcattaat aacagcacta gcatttttag tcatcttaat attatttctt
    10501 tttcccataa gatgatttta gcatttcttt tcttaatttt cttctgtgct tgcggatata
    10561 aaggcaaccc tcaatacaca agctatgaac aaaatggttc ggtaaaaacc attaaaaaat
    10621 acgaacaatt acataggtgg taaataatga aaaaagcaga tattttagtt ttagactttg
    10681 gctctcaata cactcagctt atagcaagac gcttaaggga acaaggagtt tatgcagaaa
    10741 ttttaccttt taatgtaagc ttagctgata ttaaggcgaa agaaccaaaa ggtattattt
    10801 taagcggagg tccagcaagt gtatatgcaa ctgatgcgta tttttgcgat aaaggtatat
    10861 ttgacttaaa tctacctgtt cttggaattt gttatggtat gcagcttatg gcacatcatt
    10921 acaaagctac agtagcacct gcaggacata aagaatacgg caaagcaaac atagaaatta
    10981 aaaaagataa cgctttgttt aaaaatcttc caaaaaaaca aaccgtttgg atgagtcatt
    11041 ctgataaagt agaaaattta cctcaaggtt ttgaagtttt agccacaagt gaaaatagcc
    11101 ctttttgtgt ttttggaaac gaagataaga aattctttgc tctacaattt cacccagaag
    11161 tacaacacag cgaatttggc aaaaatatct taaaaaattt tgctaaatat gcttgcaatt
    11221 gtgaaagtat ttggaatatg ggttcttttg caaaaactca agcagaaaaa atccgtgaag
    11281 aagtaggcaa tgataaagtg ctttgtgctg taagtggcgg agtagatagt agcgtagttg
    11341 ctgcactttt agctagtgct ataaaagagc aaattatagt agtttttgta gataatggac
    11401 ttttaagaag tggagaaaaa gaacaagttg aatttatgtt taaaaacact ttaggcatcg
    11461 atctcatcag cattgatgca agtgaaattt tcttaagtcg cttagttaat gtcacagatc
    11521 ctgaacaaaa aagaaaaatc ataggaaata cctttataga agtttttgaa gaagaagcaa
    11581 aaaaacataa agatgtaaaa tatcttgctc aaggcacact ttatactgat atcatagaaa
    11641 gttctgttgt aggtgcaagc aaaaccatta aaagccatca taatgtaggg ggcttacctg
    11701 aaaaaatgaa tcttaaactc atagagcctt taaaagaaat ttttaaagat gaagtgcgtg
    11761 ccttaggact tgagcttgga cttagcaaag aagtagttta tcgtcatcct ttccctgggc
    11821 caggtcttgc tatacgcatt atgggagaag taaatcgcgc tagcttagaa ctattacgca
    11881 aggctgatgt aattttactt gaggaactta aaagtacagg ttggtatgat aaaacttggc
    11941 aagcattttg cgtactttta aatgttaaaa gcgttggagt tatgggggat aaccgcactt
    12001 atgataatgc agtttgtata cgcgttgtag atgcaagtga tggtatgaca gctaccttct
    12061 cgcatttacc ttacgaaatt ttagaaaaca taagtcgccg tatcatcaat gaagtagaag
    12121 gtataaatcg cgttgtttat gatatctcaa gcaaaccacc tgcaactata gaatgggaat
    12181 aatccatttt ttctagctct tatttttaat ataaaatttt tataaaaata aggctagaat
    12241 ttatttaaga aatttcaagg aagaaatatg catggaaaaa tagctattta tatggattct
    12301 acaggacgtg gaaccgttac aaactcagca aatacctttt ttgactttaa tcgccaaatt
    12361 tggaatgata aaaaaagtat gccaagtgtt ggtatgcttg tggaatttag aactctttct
    12421 agcgaaaaaa aagcagaaga cggcaaactc gttcaaacaa gcaaaaccat aacaggtata
    12481 aaaccttcaa aatttcaaga attcaaagaa ggggatttta tcactgagca tgatttttgg
    12541 aaaactgata atgatgatga attagaagac ttgcaaaact caagaagaag tgcttatata
    12601 acagaactct atagaacaac agactttgac actatagaaa aaattcctct ttcttttact
    12661 atacctcaag ctatacaaaa atattttgcc catgaaattt tatccgtaga aacgcttcaa
    12721 gccaatctac aagatgaaaa ggaaattcct tgtatacttg attatcttat acttaaaaga
    12781 tttttattta aagcttatga tactttaatt tttatggata atagcataga ccaaacccaa
    12841 tttagcgcat taaaaagcat catgatgcat ttagagaatt cgtataagca aatgatggct
    12901 gatcaaaaac caaatatcac taaaattttt aacgaaactt ttttatcttt gcagtgtcat
    12961 taccaagctt tagtagccac catagataca agaaaaaatc gtctagcctc acttgaagca
    13021 caaatgaaaa ctttacaatc tgaaataaat cttaaaagca atgcgaccga tgcagaccct
    13081 gaaaaactta aagcacgaca agaaagattg gctaaactac aaaaagaagc agaatactac
    13141 agaacaacac taaaaagact tgatgctata agggaagatt tttataagaa aaattacaat
    13201 attttcgaaa atgcttttaa actttcacga gaaaaactct ttaaaaaaat tgtcacaggt
    13261 ttaaacctat gtgcaaccat aatggatgtc aaaatttggc acttatcttt aaaatcatca
    13321 ggggttaaaa attcttattt tactatgagt aatatagaaa attctttctg ttctctttct
    13381 tttgcagaac attacttaag tcgcttaaat aaatccgctc taaatccttt tgatcaaaaa
    13441 cttttagtgt atattcaaaa aatcacaaaa gaacaaagaa aaaaattttt agttgtcaca
    13501 tcggatttag atttattatg caaattaaaa attgaaaact tttcacaaaa tccgtattat
    13561 ttagtaaaat acgcacctaa aaaagtaaat tatcaatctt taatgcgtga taacaccttt
    13621 gatatagtct atattgatga aaaacatgtt tgggaaaatg ttgccgatat tattttacaa
    13681 ggaaagcatt ttgacaaatc aggaaaaacc aaatttaaac tgatttaaga catagaaatt
    13741 taagctaaat taagttataa tttccttgcc taaacagttt gtagtattta aagtgatcca
    13801 acacattttt attaactgcg attgtgtgat ttaccgtgtt ctgtggcatc gtttgagctt
    13861 tgaaaaaagc gagaagttgc agcctttaaa aattacctag cggttttctt tgactttttg
    13921 gggtcaatct ttgttaaacg gctgtttggg tttaaaagga gatataaatg aaaataatga
    13981 ttttgggtag tggtgcaaga gaatattcta ttgctttagc cttaagaaga gtagacaaaa
    14041 atttagagtt ttattttgct cctggaaatg gcgctaccga aagtcttgga acaaatttaa
    14101 acctaaaaga tccagtagtt ttagcaacct atgcaaaaga aaaaggtttt gatctttgta
    14161 tagtaggaag tgaaagtttt ttagctgaag gggttgtaga tatttttaaa caacaaggac
    14221 ttgctatttt tgggccaagt aaagctgctg caatgcttga aacctcaaaa tcttttatga
    14281 aaagctttct taaaaaatac cgtatcaaaa cagccaaatt tttaaacaca aatgacattg
    14341 aaaaagcaaa aaattttata tatagtttaa cccctcctat agtagtaaaa gccgatggac
    14401 tttgcgcagg aaaaggtgtt atcatagcta aaactcatga agaagccata gaagaaacag
    14461 ctaaaatgct gagcggagaa agctttggag atgctggaaa actcgttgta attgaagaat
    14521 ttttagatgg ttatgaatta agcatttttg cagtatgtga tggcaatgat tttgttttac
    14581 ttcctgcagc acaagatcac aaaaaattac tcgataatga tcaagggcca aatactggtg
    14641 gaatgggtgc ttacgctcct agctctttgg cgaatgaaag cttgcttaga aaagttcaaa
    14701 aagatattat tttaccaact ttagcaggta tgaaaaaaga aggagcggaa ttttgtggtg
    14761 ttttatttat aggtgctatg atcgttggaa ataaacctta cgtattagaa tttaacgttc
    14821 gctttggcga tcctgaatgt gaagttttaa tgcctttaat cgaagatcct ttagagctta
    14881 ttttagctgc tactcaaaga cgcttaagac actcaaaaat caaaatcaaa aaagaatttg
    14941 cagtaggggt tgtatgcgca agtgaaaact atccttacaa aagttcacca aaaagtgaaa
    15001 ttactgtaaa taacattcca gaaaactctc atatttctta tgctggagta agcctagaag
    15061 atggcaaatt aatggctgat ggtggaagag ttttagtttg cgttggcaca ggaaaaagta
    15121 tagaagaagc gcaaaaaaat gcttataaac tttgtgataa tgtaaatttc aaaggaaaac
    15181 aatacagaaa agacatcgct catcaggttc tgaaatgaaa gaaaatttac aagaccgctt
    15241 agagcgtgaa aatctaaaaa tagcaagttt tggaaaaaga gttctagctt ttttaatcga
    15301 tgatatggtt atttctttga ttgtgtttat cattttttat gatcgtctaa tccaagcaaa
    15361 agatttattt gaaacaactc aaattgtagg aaatttttac cttggcttca tcttgcttca
    15421 ttttagttat caagcaattt ttacttatct ttatggggca agtttgggaa aaatattatg
    15481 caaaattatc atcttggatg aaaatcttct tgataaaccc aatctcattc aaagttgcat
    15541 caggtctgcc gtaagacaag ttagtgctat ggcgtttatg cttggatttg cttgggcttt
    15601 aagcaatgat ttacgcaaag cttgggagga ttatctagca aggacaatag tagtcgatgt
    15661 ggcgtaaatt ttccctattg ctaggaacta gcatagcttt aaatgcagca caagttgata
    15721 tttacgctct tgatgcaaaa aaagaaggtg atattcttac tgcgaacaat gatgttatta
    15781 ttttttctga tttttatttc atcactgcca ataaagcaat ttacaatgaa aaaaccggag
    15841 atgttgagct ttttggcgat gttaacatcc taaggggaca aaacgaaaga tcacattctg
    15901 attatgctaa aatcaaccta aattccaatc aagccgattt tagtaatttt ttcttttcca
    15961 ataacaatct tgaagtatgg tttcaaagca aaacaagcca tctaaatgat aaagtctttg
    16021 aaagcaaagt ttcagcagtt tcaagctgca atgttgaaga tcctgattgg gaaattcgtt
    16081 tttcaaaagg ctggcttaac cgggaaacca attttgttca tctttacaat gcaagattat
    16141 atgttaaaaa taccccagtt ttttatctac cttattttgg atttagcgct gatactcata
    16201 gacaaagcgg gcttttaatc ccaaaaatcg ttttaaaaag tagcgaaggc ttatactatg
    16261 aacaacctat ttatatagcc actcaagaaa attgggattt agaacttgat ccacaaattc
    16321 gaacaaaccg tggttttgga ctttattcta ctttaagatt tcttgattct ccatattcaa
    16381 caggagaatt aaattttggt gcttttaggg aaaatagctc ctattttcac gatgaaaatt
    16441 tgaaaaatca aacccactat ggaatagaac taaaatactc aagagatgat ttaatcaaat
    16501 ctttactcag tgataatttt caagaaggtc tatggataga tgcaacctat ctcaacgatg
    16561 tggattattt aaatttagga agtagggatt atcgagatct taactcgctt gtaacctcca
    16621 aaatcaatta ttttttagct gatgaaaaca atttttacgg agcttatgca agatattata
    16681 tcgacacatc taaacttagc aacaatacaa ccttacaaga atatccaagc tttcaatatc
    16741 atagattttt aaataacctt tttgatgaac gcttgcgtta ttcatttgat gcttcatttc
    16801 ataattttta ccgacctgct ggttcttatg caaatgagct aaatttagac ttgcctatct
    16861 cgtatcacaa cgcttttttt ggagactttt tacactttac ttttacagaa agattttatg
    16921 cttcttttgt aaattatagc aacgatcctg aaagaaacca tgagcattat ttcagaaaca
    16981 ctcatgattt taatctctac accgatcttt caaaagctta tgaaaatttc tttcatactt
    17041 taaatttagg ggtgaattac attttaccag gagcaaaatc aggtaaaatc acgcaagatt
    17101 atcttgaaga atacgacaaa gaaaacgaac atacaagtct ttatactgtg caatatttct
    17161 ataacaacga aggacaaaaa aaactcaaac acagaatttc acttgactat ctcaataaac
    17221 aaaatgaatt ctatgaactt gaaaatcttt taacttatta ttttaatgaa aacatcaatc
    17281 tcaacagcga agtgctttac tcttatgagc aaagtcgctt taccaatgtc atcagccaaa
    17341 tagaagtcaa tacaaattca aaatttaatt ggatgttttc tcatgcttat caaaacgatg
    17401 agtatggaaa atatagcttt attggtacaa gagcaaatta tattgccaca cctaattaca
    17461 atttatttgg tggaatttgg tttgatactc aaagagctca tgcaaacatg tgggaacttg
    17521 gctataccta ccaaagaaaa tgttggaact attctttaat gtatagagaa agaatcgatc
    17581 cacaactcac aagtggtggc atcacagcta aaaatcaaag cggagtttat tttattttca
    17641 acttctatcc tttaggagga gtaaaatacg atttctcttt agcagaaagt gaaaacaaaa
    17701 tttaaaaagg atgaaatttg ctaaatattt taaaaaattt tacgaattta ttatctggta
    17761 aaaaaggaaa aataatgcaa tacagcatag aaattaacaa aaatacagaa atatttgata
    17821 tagacaaagt cgccaaacaa gctgccggtg ctgttttaat gagacaaggc aaaagcgttg
    17881 ttctagctac agttgcaaga gaagaaaaac aagttgaaga agatttttta cctctaaccg
    17941 tccaatacat cgaaaaagct tatgccgcag gaaaaatccc tggtggttat gtcaaaagag
    18001 aaaccaagcc aagcgatgca gaaaccttaa cagcacgcat tattgataga agcttacgcc
    18061 ctctttttcc aaaaggctat gcttatccga ctcaaatcgt tgtgatggtt ctctcagctg
    18121 atcctaaagt agatttacaa gtaatgagct taaatgccgc aagcgtggca ctttatctta
    18181 gtgatatacc tatgaaagct ccagtatgtg gcgtgcgtat aggaaagata gatggaaatt
    18241 tcatactcaa tccaaacaat gaagagcttc aaaatagcac cctagatctc tatgtagcag
    18301 gtgtaaaaga tgagcttttg atgatagaaa tgagagcctt acctgatcaa aaagaaaatg
    18361 aaatctttat cgaagctcct tatgccgatg ttttaactca aaccacttca caaaatatga
    18421 atgaacttag cgaagatgaa attttagaag ctctaaattt agctcaaaaa gctatattaa
    18481 atggttcaaa tgcttatgaa gaagccttta gcaaacacaa aaaaaattct caaatcgaac
    18541 taaaaaatga gattgaacat cctgaaattt tagcttttat agaaaataat ttccaaaaac
    18601 aaatcaaaga agccatcaat caaatggcaa aaagcgaaag agcaagcgaa ctaaataaaa
    18661 tcgctaaaga aattttaaat cttgaaatca ctaaagactg gagcgaagaa agtgtcttaa
    18721 ataccttagc taaagtcaaa cgcaaactta ttcgtgagca aattttaaat gaaggcaaaa
    18781 gagctgatgg tagaagttta aacgaggttc gtcctattag tatagaaacc aacatcttac
    18841 caaacgctca tggttcttgt cttttcactc gtggacaaac tcaagcccta gtggttgcaa
    18901 ccttaggcgg agaaaacgat tctcaaatga tagacttgct tacagaaaaa aatcctataa
    18961 gcgaacgctt tatggtaaat tataattttc caggtttttc agtaggcgaa gcaagtccta
    19021 tcaaagctcc aggaagaaga gaactaggac atggaaattt agccaaaaga gcactttatc
    19081 caagtgtgga tgaaaactat ccttatgtaa tccgcttagt cagtgaaatt ttagaaagca
    19141 atggctcaag ttccatggca acggtttgtg gcggatcttt agccttaaaa gcagcaggag
    19201 tgccaagctt aaaacttgtt gcaggagtag ccatggggct tatctttgaa gataacaagt
    19261 atgctgtttt aacagatatc atgggacttg aagatcatga tggggatatg gactttaaag
    19321 tagcaggaag caaagacggc gttactgctc ttcaaatgga tataaaacta ggtggaatcg
    19381 atcaagaaat actaaaacaa gctttatacc aagccaaaga aggaagaatt cacattctaa
    19441 atatcatgga agaagccgcc aaagaaatca tagtcaatga agaagtttta cctaaacttg
    19501 agctttttag cgttgatcct tcaaaaatcg ttgatatcat aggacaagcc ggaaaaacca
    19561 tcaaagaaat cgtagaaaaa tttggcgttt ctatagactt agatcgcgaa aaaggtgaag
    19621 taaaaatagc aggtagtcaa aacgagcaaa tcaaagccgc aaaagactac atcataaaca
    19681 tcacaagctc tcaaaaagga actaaaaaag gccctaaaga caaagatata tcaggctttg
    19741 aacttgggca agaatttcaa ggtattgtta aaaaaatcgc tccttttgga gcctttgtgg
    19801 aacttaaaaa tggtgttgat ggtttattgc atagttcaaa aatcaagcat cttaatttaa
    19861 gcgaaaacca aagtttaaag gtgaaaatca gcgaaattaa aaacggaaaa atttctgtgg
    19921 atttgtgcga gtgagtgaat ttttaactca tccttttgag cctttttttg acaaagattc
    19981 taaaatctta attttaggat cttttccttc tattaaatca agacaagatg gcttttatta
    20041 tcaacaccca agaaatcgtt tttggcctat actagaaaca ctttttaatg caaaattaga
    20101 aaatatcaca gaacaacaag cctttttaag aaaaaaacat atcgctcttt gggatgtact
    20161 tcaaagttgc aagataaaaa attcagatga taaaacaata agttatgcaa aagccaatga
    20221 tttaaaccta atcctttctc aaaccaaaat tcaagccatt tttactacag gacaaagtgc
    20281 ttatagattt tttgttaaat tccaccctcg cttagaagcc atagccctac cctcaacttc
    20341 tcctgcaaat ttaaattttt cttttgaaca gcttttacaa aactatgaaa taatcaaaaa
    20401 atttacaaaa taaaagaata ttttaatttt ttagatttta gaataattat aaaaatttaa
    20461 ggagttaaaa atgccttttg taaatatacg catcaccaaa gaaaacggag aacctacaac
    20521 agaacaaaaa caagagctta tcgcaggagt aacggattta cttgctaagg ttttaaacaa
    20581 aaataaaagc tcgactgtgg taattatcga tgaaatcgat acggataatt acggactagg
    20641 tggaaaaagc attacccaag caagaaaaga aaaaagctaa cttacatcta gcttttgtgt
    20701 gttatcctta aattcaaatt ccactctctt agccccaaaa cctttagcaa tagcttctaa
    20761 agtatcctta gcacttttat ggattttgct ttctaaattt tggataagat ttaaagacaa
    20821 gtctttaacc tcatctttgg cttcttttat gagtttgttt ttatcacttt cactaaaact
    20881 aatccccgta ctattgatag aatcaggcag taaaaaaggt aaaaatttag catttttttc
    20941 atcataaaat ttcatatcta tgatgctgtg tttgtatcta cactctggca tgatgatctt
    21001 ataagcatcg tcccctaaag gcaaaatatc aaagttttta tcccttaaat catacaagaa
    21061 agtgatctca aattcaaaaa tcaaagcaat ctgtctttca ctcaaagacc atcctaaaag
    21121 atttttccaa attccattaa aagcgctatc ttttttagtg acaatctctt tactaaaaac
    21181 ttgaaaaaca cttaattctc ctatggattt aagttgcatg atatcgctaa aactttgcgt
    21241 gcttttttct tctattttag ggcttttata ctgcctaaaa agcactacaa acaaaagcac
    21301 aagtaaaatc atcactaaaa caaataaaat catttccatt ttaaaccttt ctaaatttat
    21361 aaaccttgat ttgaaaagat atattttttc tcaaacgcca agaaaataaa agcattaatg
    21421 ataaaaatca aacacacaaa agtaaaaaca aattccacgc taaaatgaga agccataagc
    21481 cctccgccaa aagcaccgca aaaatttccc aaaaattgac aagtttgatt aaaaccaaaa
    21541 atcacactta aatttttagc actcacactt tttttaagca aggcattcac acaaggcaaa
    21601 agccctccaa gtcctacacc tataagtaaa cgcacgaaaa taagcgtata aacattactt
    21661 gctacagcct gcaagtaaaa gcaaattcca caaaatatca aagctccaaa aataatctta
    21721 ctaggcccta tcttatcggc gatttttcca agttttggtg cgaaaaaaag attgctaatc
    21781 ccacttgcag ccactactat acccgcccaa agagccaaat ttccaccttg atgaatttgc
    21841 tcaacataga tacttaaaat cggcatcact ccaaaagtac caaattgtat cacaaaagta
    21901 gtgataaaaa gaacgataat aagggttttg ttttctttca ctttttgagt atttttcttc
    21961 gcctcttttt gaatttttct ctcatggatg aaaaaataaa tcgtcacaaa agaacaagcg
    22021 atcaaaaaag ccaccatatc aaaaaccgta ctaatactaa aaaattcagc cacaaagcca
    22081 ccaaacaaag gcccaagcaa acttccactt atagaagccg tagaaagagt tcctaaagca
    22141 taagccactt tttctttagg tgctatcaca gcgataaaca caacagcagc agaagtaaaa
    22201 cctgaaatta tccctgttaa accccgcaca aaaactactt ctaaagcact atgagcaaag
    22261 ctaagccata aggttaaaac cgacatccca aaacttgcac gaagaagcat atttttataa
    22321 ccatactttg cacccaaaaa agcccacaaa ggtgaaaaaa cagccataaa aagtggagtg
    22381 atcccaaaag caagccctga gtaaaacgct atttcactcg tatcaacatg tcctagttct
    22441 ttgatataaa aaggcaaaat cggagcgatt tgactaagcc ccatacttgt ggtaaaaaca
    22501 ccaaaccaac acacaagcaa agttctattg aaattttcca tggatttatt gtatgatatt
    22561 ttttataatt tttaattaaa actcaaggat aaaaatgaaa aaaatactct ttatatgctt
    22621 aggcaatata tgccgttcgc ctatggcaga atttatcatg aaagatcttg tcaaaaaagc
    22681 aaatttagaa aaagaatttt ttataagcag tgctggaact tcaggagaac acgatggaga
    22741 aggtatgcac tatggcacca aaaacaaact tgctcaactt aacatagaac acaaaaactt
    22801 cacaagcaaa aaactcactc aaaagctttg cgatgaaagc gattttttaa tcaccatgga
    22861 caattctaac ttcaaaaatg ttttaaaaaa cttcaccaac acccaaaaca aagttttaaa
    22921 aatcactgat tttagtccta gtctaaacta cgatgaagtc cctgatcctt ggtatagcgg
    22981 gaattttgat gaaacttata aaattttatc cctagcttgt aaaaatttac ttgttttttt
    23041 atcaaaataa tttaaaacaa ctatatatta cttctcgttt actttttagg cttatacttc
    23101 taaacgaacc gaaaaacatt cataagaaaa actccttaaa attacacgcc tagcttaaat
    23161 ccctttagct aggcttttct ttagatgttt ttatccttcg gatttaaaat ttttactatt
    23221 ttaagtgctt cttaagaaaa aactccaaat ttatgtgcta caattacaat gttttattaa
    23281 tttttgacaa ggagaattct catgaaacta gttaaactta gtttagttgc agctcttgct
    23341 gcaggtgctt tttcagcagc taacgctact ccacttgaag aagcgatcaa agatgttgat
    23401 gtatcaggtg tattaagata cagatacgat acaggtaatt ttgataaaaa tttcgttaac
    23461 aactcaaatt taaacaacaa caaacaagat cacaaatata gagcacaagt taacttcagt
    23521 gctgctatag ctgataactt caaagctttc attcagtttg actacaacgc tgttgatggt
    23581 ggcactggtg ttaataacgt aaaaaatgcc gaaaaaggac tttttgttcg tcaattatac
    23641 ttaacttata caaatgaaga tgttgctaca agtgtaatcg ctggtaaaca acaattaaac
    23701 cttatctgga cggataacgc tattgatggt ttagttggca caggtgttaa agtagtaaat
    23761 aacagcatcg atggtttaac tctagctgct tttgctgcag atagcttcat ggctgcagag
    23821 caaggtgcag atttattagg acatagtaat atttcaacaa catcaaatca agctcctttt
    23881 aaagtagatt cagtaggaaa tctttacggt gctgctgctg taggttctta tgatcttgct
    23941 ggtggacaat tcaacccaca attatggtta gcttattggg atcaagtagc attcttctat
    24001 gctgtagatg cagcttatag tacaactatc tttgatggaa tcaactggac acttgaaggt
    24061 gcttacttag gaaatagcct tgatagcgaa cttgatgata aaacacacgc taatggcaat
    24121 ttatttgctt taaaaggtag cattgaagta aatggttggg atgctagcct tggtggttta
    24181 tactacggtg ataaagaaaa agcttctaca gttgtaatcg aagatcaagg taatcttggt
    24241 tctttacttg caggtgagga aattttctat actactggtt caagactaaa tggtgatact
    24301 ggtagaaata tcttcggtta tgtaactggt ggatatactt tcaacgaaac agttcgcgtt
    24361 ggtgctgact tcgtatatgg tggaacaaaa acagaagctg ctgctaatca tttaggtggt
    24421 ggtaaaaaac ttgaagctgt tgcaagagta gattacaaat actctccaaa acttaacttc
    24481 tcagcattct attcttatgt gaacctagat caaggtgtaa acactaatga aagtgctgat
    24541 catagcactg taagacttca agctctttac aaattctaag aagctttcaa gtctaacttc
    24601 aaggcggagt tttgctccgc ctttttttat gcctgatttt taaaacttaa atttatataa
    24661 aaaattttcc caagctaaaa cgctttagga aaattaagac ttaaaccaat tagtgatttt
    24721 ttcaaaaagc cctttttgct cttgatgcat accatctttg atgccaaaac tttcacttag
    24781 tttttctaaa agttcttttt gttcatcgtt taaagaagtt gggaatttga tagaaatttg
    24841 aacgatttga tttcccatgc gagaactatg aacatctttt accccttctt tttcaagaac
    24901 aaatctttgt ccatctttag caccctttgg taaatttaag gtcgcttcac cgcgtatggt
    24961 gggtactttt atactttgtc ctaagatagc ctgggtaaaa aacactggaa attctatata
    25021 tatatcatca tcatctctga taaaagtatc atcttcagcg gcgatgatct taacatacat
    25081 atcccctcta gtaccatttt ttaagatatt gcctttagca ttgacacgaa gcttcatacc
    25141 tgtatctaca ccttctggga tattaagctc gacactatct ttgctttcat tataacccaa
    25201 acctttacaa tcgctacatt tttcactagc tttttctcca attccttgac aatcagggca
    25261 agtttgtgca aaagtgataa aaccttgaga aaccccaacc tgtcctctac cttgacactt
    25321 tggacaagtt tgaagctttc catctttagc ccctgttcca ttacaagttt tacaagagca
    25381 tttataagta aagtctatat ttttcttaca accaaaaacc gcttctttaa aacttaattt
    25441 taaattaacg ataaaatctg aagggatttt ctcatcattt gaactttttc tacgacgcga
    25501 tgatgaacca aagccctctc caaaaaaact agaaaatata tctcctaaat cctcaaaacc
    25561 accaaaacct gagctattag aaccaaatcc accgcctttt aaagcatctt ttccgtatct
    25621 atcataaata gctcgctttt catcattgct taaaacttca taggcttcat taacaagctt
    25681 gaatttatct tctgcttctt tatcaccttg gtttctatca ggatgatatt ttaaagccat
    25741 ttttctatag gcttttttta tggtttcttt atcagcattt tgcgtgattt caagaatttc
    25801 ataataactt atttccac
//
LOCUS       DAPIYB010000014        25080 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.014, whole genome shotgun sequence.
ACCESSION   DAPIYB010000014 DAPIYB010000000
VERSION     DAPIYB010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 25080)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25080)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25080
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.014"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..243
                     /locus_tag="RJ318_000444"
     CDS             <1..243
                     /locus_tag="RJ318_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430341.1"
                     /translation="LKEQRNNALKSEQEQILLWMNNFNFLKDNNLSLIQKEKDLFEKD
                     LKDLREIFKKNAFEIGIWWFSKEKEDLEKRINESLK"
     gene            240..1001
                     /locus_tag="RJ318_000445"
     CDS             240..1001
                     /locus_tag="RJ318_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HDV7430342.1"
                     /translation="MRFDFFVSKRLNISRNKALELIENEEILLNGKSFKASFDVKNFL
                     ENLKKTQDLNPEDILLANELKLDLLSEIYVSRAALKLKKFLEENDIEIKHKNCLDIGS
                     STGGFVQILLENQALKITALDVGSNQLHPSLRVNEKIILHENTDLRAFKSEEKFELVT
                     CDVSFISLINLLYYIDNLALKEIILLFKPQFEVGKNIKRDKKGVLKDDKAILKARMDF
                     EKACAKLGWLLKNTQKSSIKGKEGNVEYFYYYIKN"
     gene            967..1821
                     /locus_tag="RJ318_000446"
     CDS             967..1821
                     /locus_tag="RJ318_000446"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDV7430343.1"
                     /translation="MLNIFTTISKINITSLAIGCFDGMHLGHLKLVKCLDENGALLVI
                     NKFKGQFLCSNRQKEEISGKKVIEVDFESIKSLDGRDFLSFLKKEFVNLKFIVVGYDF
                     SFGKNRAYNAKDIESLSGIKTIIVDEFSIDGIGVHASLIKDFLSKANLQKAKEFLGRD
                     YSIKGKMIKGQGLGSKELFATINLDCEGYFLPQNGVYVTLLKSQRKTYKSVSFLGVRS
                     SDENFAIESHILEELGENFTQGEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQARE
                     LLRKNDER"
     gene            1808..2518
                     /gene="cmoA"
                     /locus_tag="RJ318_000447"
     CDS             1808..2518
                     /gene="cmoA"
                     /locus_tag="RJ318_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HDV7430344.1"
                     /translation="MMKDELFKQSPKKQFEFDKSVASVFDDMINRSVPFYRENLELCG
                     NLLAKILPTNASVCDLGCSSANFLIFLANLRKDFKLFGVDNSASMLEVAKSKAKAYGL
                     DISFFEANLCEFDFFTCDVFVANYTMQFIRPPKRQELLDQIYKNLNSKGILIMSEKIL
                     YEDAFLSKNIIELYADYKEKQGYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKK
                     IESIFKWANFETFIAFKD"
     gene            complement(2508..2729)
                     /locus_tag="RJ318_000448"
     CDS             complement(2508..2729)
                     /locus_tag="RJ318_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDV7430345.1"
                     /translation="MTMKITLFLSLIGIFFAACEQTKSVEYYQNHPEEAKKRSLECRH
                     KAIISQDCVNAYKIGFPKDEWEDENISNP"
     gene            complement(2726..3160)
                     /locus_tag="RJ318_000449"
     CDS             complement(2726..3160)
                     /locus_tag="RJ318_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDV7430346.1"
                     /translation="MRRLSILLAILIVINITACDSKTENYYKNLPSEAKEKAKECKES
                     GTLSEDCINALKVGVKPTNEEGKYSPNTPKKSDNQILEALKQNDLKKEKTTKDINQSS
                     ENNESIIIPPIAETPSEIYPSKTTENNQSSIFSDDVNMTQEK"
     gene            complement(3218..3850)
                     /locus_tag="RJ318_000450"
     CDS             complement(3218..3850)
                     /locus_tag="RJ318_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HDV7430347.1"
                     /translation="MEINALTITTLYIIGISAEGMTGALAAGRHKMDLFGVIFIALVT
                     AIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVATKIPRVVTKLETLFLTLDAIGL
                     VVFSILGAQIAIDQNHGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII
                     AGAIYYSLIIWLELNALVCTLLTLFIGVFARLLAIKYQWSLPIFSYNEEK"
     gene            complement(3861..4511)
                     /locus_tag="RJ318_000451"
     CDS             complement(3861..4511)
                     /locus_tag="RJ318_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HDV7430348.1"
                     /translation="MKIFIFLLTISLNIFALEPYKPSADFSSYFNNINCSQILDKFFY
                     LNCYDYKLKGTKAVAYKVEASNLKDRQIKKRPRFEDDTNIPKKYRTTWSNYKNSGYTR
                     GHTAPNASFSFSKAAQNSVFLMSNITPQNAQINNKIWNEIEQRERNLALEFQSIEVLN
                     LVLYDKEPQYIKNRIAIPSFYVKIIKTPKFKECYQAPNHEVNDENIKQYQINCDKF"
     gene            complement(4508..5134)
                     /gene="nth"
                     /locus_tag="RJ318_000452"
     CDS             complement(4508..5134)
                     /gene="nth"
                     /locus_tag="RJ318_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDV7430349.1"
                     /translation="MKRNLEIKELFLKHFDKPVTELKFSNLYELLVCVMLSAQCTDKR
                     VNLITPDLFKAYPDIKSLANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEI
                     PLDEQNLKSLAGVGQKTAHVVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEED
                     LTRTFKDNLNYLHQAMVLFGRYTCKAKKPLCKECFLNHLCKSKDKELK"
     gene            5215..6036
                     /gene="peb4"
                     /locus_tag="RJ318_000453"
     CDS             5215..6036
                     /gene="peb4"
                     /locus_tag="RJ318_000453"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PEB4"
                     /protein_id="HDV7430350.1"
                     /translation="MKKFSLVAATLIAGVVLNVNAATVATVNGKSISDTEVSEFFAPM
                     LRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPLYTKELDRAKDAILVNVY
                     QEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGK
                     ELDAKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTN
                     FGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK"
     gene            6036..7100
                     /gene="fbaA"
                     /locus_tag="RJ318_000454"
     CDS             6036..7100
                     /gene="fbaA"
                     /locus_tag="RJ318_000454"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HDV7430351.1"
                     /translation="MGVLDIVKAGVISGDELNKIYDYAKAEGFAIPAVNVVGTDSINA
                     VLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYGVPVILH
                     TDHAARKLLPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLD
                     ALGVALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFG
                     NVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGSGSELKDIKNAVSY
                     GVIKMNIDTDTQWAFWDGVREYELKNRAYLQGQIGNPEGDDKPNKKYYDPRVWLRSGE
                     ESMIKRLEIAFEDLNCINKN"
     gene            7195..8637
                     /locus_tag="RJ318_000455"
     CDS             7195..8637
                     /locus_tag="RJ318_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDV7430352.1"
                     /translation="MDIKSDEISELVLPEGKDARGSLVYFKIIFIPAFLYILILLGYF
                     NVIDFKVELHTVIMTGVIFFTALIFARHSAEYAYSIFEQQKDEFKQALKRHIMRHFLA
                     IGKDTKSNANFDDFAYTYIKGARNENFASIGSAIFPMMGILGTFISIAFSMPNFSSSD
                     TAALEQEIADLLSGVGTAFYVSIYGIFLALWWMFFEKYGKSKIDRLLNRQKNATSGFF
                     WTKEELDQRYLTESLQHFEKIGAIFKQVSNDDFFAELDHAIDRKFGIFQDMLNVEEKA
                     IRLSSEHIKQTMGELSKAQRDQRDLGKLYSEMLNGIGLLNQNLKEINTRMSEQYNRLL
                     DISSDKIHHLDKTLSAFDEKIERFGKNFELYEKAMLESQEKVFEGFKASLFEGMHKFK
                     EVYEEEKSIDAKIKMMDELKKEMKALDEETSQMMSKLSGDENQNKENETKQIEDFSES
                     KTEENQDEIQAEISKQESNDELKNEDKENK"
     gene            8634..9587
                     /locus_tag="RJ318_000456"
     CDS             8634..9587
                     /locus_tag="RJ318_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDV7430353.1"
                     /translation="MKNESKEDSNFWIAYADLMAGLLFVFILLIGAIVVKYVLTQSDL
                     KEIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITN
                     YKQLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLS
                     KELQSKLDNNITIDEKIGSISLPAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDP
                     KIFSNIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRS
                     FSDPVFVNGVEDKDKSRRIEIKFSIKNDNALKDVEKFFEFH"
     gene            9574..10449
                     /locus_tag="RJ318_000457"
     CDS             9574..10449
                     /locus_tag="RJ318_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-aminocyclopropane-1-carboxylate
                     deaminase/D-cysteine desulfhydrase"
                     /protein_id="HDV7430354.1"
                     /translation="MNFIKTISPIQKINFNGFEFYIKRDDLLGEINGNKARKLAFYIH
                     QRYPKNQSFVSYGGSQSNALAALSIFAKQRSYKLVFACEKISTFLKNNPCGNYALALE
                     NGVDFVENIHSLSLKQFALSLCKKDDVFIEQGIANLEAQYGYMELAQEIQMQSQSLKL
                     DFDIFLPSGTGTSAAFLAKYSKFKVFTCACVGDIKYLKKQILTLDPSYDFSNLEFLTS
                     DKKYHFAKPYKEFYELYMDLKLKCNIEFDLLYDILGLSIALKQEWKKPLLYIHQGGIL
                     GNSTMLERYKFKKSV"
     gene            complement(10441..11784)
                     /locus_tag="RJ318_000458"
     CDS             complement(10441..11784)
                     /locus_tag="RJ318_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDV7430355.1"
                     /translation="MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLV
                     FCIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQSIGYMGLLGSFGIMAYYMVLGG
                     WVLVYIWELTLGNFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIINYIILKRG
                     IIDGIEKSVKFLMPLLFICLIIVVGRNLTLDGAMAGVKFYLEPDFSKILSPKLLIDVL
                     GQVFFALSLGFGVMITLSSHLNKNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGL
                     APDSGPSLVFETLPIAFSHIHFGTIVCILFFVLLLIAALTTSLPIYQVIISVLEEKFK
                     YSKNLSINLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAF
                     FCCIYVGWILGKQESLKELSNNNTLKSSWFGIWFYYVKYIVPLIILIIFIYGILN"
     gene            complement(11835..12503)
                     /locus_tag="RJ318_000459"
     CDS             complement(11835..12503)
                     /locus_tag="RJ318_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDV7430356.1"
                     /translation="MKIQSLQIGKIKNYKNFQSAFIKDTYLEETQIDFLGVLDDQIAD
                     KIHHGGYHKAIFTNSCQNYPIWERFLNKKLNFGSMGENLSIDGLCEQNVCIGDIHQFS
                     NAILQVSEPRKPCVKISKIHNNPNFTHEIFKTGLSGWYYKVLQVGQIRKHENIKILEK
                     NSTSLSVFELNQLFYSPHQILKQNPNLLDKLEKLNSLISQNWHETIHKRLKNTYDISY
                     MDSL"
     gene            complement(12500..14203)
                     /locus_tag="RJ318_000460"
     CDS             complement(12500..14203)
                     /locus_tag="RJ318_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDV7430357.1"
                     /translation="MRIFGIILLSFCLCFASILSLNEAFNVKSNSYNNSISIDIELGK
                     DIYLYSNKLKLYINEKDISSLINLPQSSTRGNENVYYQKLNLALPNLLLERFAKNTTN
                     LIKLEFQGCSEQGLCYNPQTWYFDLISKKDAFEISKPYKAQKTDKKTKIESEESSIAN
                     FLATDNFFWILLSFFGYGLLLSLTPCILPMIPILSSLIVAKSNAKFSKKYSFFLSFIY
                     VFFMSLAYAIAGVIASFLGASIQGILQKPIILILFALIFIAFAFAMFGAFRFELPLRF
                     QTFIHKKSEKGKGVVGIAIMGFLSALIVGPCVAAPLAGALIYIANTGNALLGGSALFI
                     MSFGMGIPLLFIGLGLGFIKPGFWMEKVKIFFGFVMLAMAIWILSRIIEENYILIAYG
                     ILGVFFSVFMGIFEKSFTIISKIKKSILILILAYSLSIFLGGLFGAKNFLNPLNFNTI
                     SASKHALSYDYINNFEQLKQEIQTNTKPIMLDFTASWCENCKLLDELTFSDERIIQKM
                     QNYKLIKVDVSENNNEQIKTMKEFNVFGPPVLIFFENGKEKLKITGFISADDLLKKIE
                     P"
     gene            14298..15179
                     /gene="ppk2"
                     /locus_tag="RJ318_000461"
     CDS             14298..15179
                     /gene="ppk2"
                     /locus_tag="RJ318_000461"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HDV7430358.1"
                     /translation="MQENNSPKAQAVVKKNEIYVSVKRKKSTIEYEKDLKNLQIELLK
                     FQNHVKAKGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQWYF
                     QRYIAHLPSAGEIVIFDRSWYNRAGVEPVMGFCTPQQHKDFLREVPLFENMISNSDII
                     FFKFYFSVSKDEQKKRFEKRRSDPLKQYKLSPVDQKSQELWDKYTLAKYSMLLASNTP
                     TCPWTIISSDDKKKARLNLLRFILSKVEYPNKKTGDFSKIDAKLVRSGEEEIRKMEAN
                     LEKLDSKKADEKIKDLD"
     gene            15188..16378
                     /locus_tag="RJ318_000462"
     CDS             15188..16378
                     /locus_tag="RJ318_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDV7430359.1"
                     /translation="MQKLVENLALKYYDKVVDLRHQIHMHPELEFEEENTAHLVCKIL
                     DEFGIKYQKNIAKTGILAIIEGKKKSQKKPKCVLLRADMDALPVQEKTNLSYASKIDG
                     KMHACGHDGHTAGLLGAALILNELKDEFCGTIKFMFQPAEEGSGGAKPMIESGVLENP
                     YVDAVFGCHLWGPLLENTAQIVSGEMMAGTDIFDLEFIGRGGHGAHPHTCIDPIIMTT
                     QFVNNIQSVISRRLAPYEAGVITVGQICAGTTYNVIPTNAYLKGTVRFLNDKTQDILK
                     SSLEEVAAATAKSNGGDYKLKYTKEFPPLINDENAALIARKAFAKVLGEENIIVSSKP
                     DMGAEDFAFLTRERMGAYVFVGISKDLNHPALHHSSTFCWDDENLKVLMQGDVMMALE
                     FLNL"
     gene            16457..17629
                     /locus_tag="RJ318_000463"
     CDS             16457..17629
                     /locus_tag="RJ318_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDV7430360.1"
                     /translation="MKKKIVLIILIAILGSVEAYFIFFNNDEKISYLTQKIQKKDISQ
                     TIEAVGKVYAKDQVDVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDITKA
                     QLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELN
                     AQVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVDEGQTVNANQNTPTIVRIANLDE
                     MEVRMEIAEADVSKIKVGTELDFSLLNDPQKTYHAKIASIDPADTEVSDSSTSSSSSS
                     SSSSSSSSSNAIYYYAKFYVANKDDFLRIGMSIQNEIVVASAKAVLAVPTYAIKSDPK
                     GYYVEILENQKAVKKYVKLGIKDSINTQILEGVNENEELIVSSSADGLATKMKLRF"
     gene            17629..19554
                     /locus_tag="RJ318_000464"
     CDS             17629..19554
                     /locus_tag="RJ318_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7430361.1"
                     /translation="MIFLKNICKNIGENAILKNVSLSIEKGEFVAIIGQSGSGKTSLL
                     NIIGTLDTPSSGTYVFDEYEVTKLNNDEKARLRREKIGFIFQRYNLLSLLSAKENVSL
                     PAVYAGKNLQERSQNAKKLLNDLELAHKLDSKPNELSGGQQQRVSIARALINGGELIL
                     ADEPTGALDSKSGIMVLEILQKLNEQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDT
                     KKEKAQEKLILKTMPKEKKTLTLLKNQAFECFKIAYSSILAHKLRSILTMLGIIIGIA
                     SVVCVVALGLGSQAKVLESIARLGTNTIEIRPGKGFGDLRSGKTRLNFSDLETLRSLE
                     YLEAVDAHSNTSGVATYTNISLSARAEGVGVNNFAIEGLRIDAGRILNNDDVKNSTNV
                     AVLDFNAKKNLFPDEKSENILGRVVLFNSQPFKIIGVLQKDTDKPIEDNVVRLYIPYT
                     TLMNKLTGDRNLREIIVKVKDDVSSTLAENAIIRILEIKRGQKDFFTFNSDTFKQAIT
                     ANKRTTTILTACVAVIALIVGGIGVMNIMLVSVSERTREIGIRMAIGARREDIMMQFL
                     IEAVMICTIGAILGVILSIFVIFAFNTLSTDFPMILNAYSVLLGLLSSMLIGVIFGFF
                     PARNAANLNPISALSKE"
     gene            19556..20926
                     /locus_tag="RJ318_000465"
     CDS             19556..20926
                     /locus_tag="RJ318_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDV7430362.1"
                     /translation="MKIILSIFLAFFLSACGVKLSLPKEVDLTQEQMKDLNLTYDWYR
                     SYDNAKLNEFLNFVLLNNSDINIARKTLLSALARADLIDYDLYPTLSGNLGFGGDKDL
                     NSGKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAYDLENLKISMINTALNDV
                     FELAYFNDVDKLLRAYLSNLEQMKELYNYKYKLGKIEELDLLNIEQSLLRAKQNLLSN
                     DQNRNLLIKNLQDLLARQEGFACIEYFKTLSLNDFKTLSPDFNIPLKALAYRADVRSK
                     LNSLKSAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKFEILSGNVKISLPFLDYG
                     RVKQNIKISQFTYEQLLISYEQALQSAMNEFALNYKDYQSDTLLLQNLQNINIKQELI
                     TKAYYEKYILGKSELKDYLDANNTLNSTQQEFLRARFNLLKTINSYYQITALSFNDEN
                     LEFLKY"
     gene            complement(20929..22107)
                     /locus_tag="RJ318_000466"
     CDS             complement(20929..22107)
                     /locus_tag="RJ318_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HDV7430363.1"
                     /translation="MLVNKFKIILLFFIIFTSSYAQNLNTNDTIDSILNQNKNHSALT
                     SYVLKKDLKNLEKKLEKNQNIGIRIYGDSHMAADFFPRVIRGYLIRSNSIGFAYPLQP
                     KYQQNLNLVYSYKNFEILNSRNPANAGHNFPLGGIIAKAKTKGAKINLDTTLDKKNFK
                     IGFLFKAKQNTNAFSIKDAKNQSYELRTTQINKWSYKELELDLPLQISALQKDAELGG
                     YFITNKDNNVFLDTIAINGAKSDLWLSWNQTVVKKELGLLHNDLIILAYGSNDALFKG
                     FEKQKFKNNLKKWISILKTYNKNAVIMLISPPTVVQKQGKNYKLAPDFFTIRKALYEV
                     AKEEKTLIFDMHQFMQDSGGKNKWIEQKLSLNDVHLTIKGYELMAKKLLEDLKNIIDY
                     "
     gene            complement(22094..23104)
                     /locus_tag="RJ318_000467"
     CDS             complement(22094..23104)
                     /locus_tag="RJ318_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HDV7430364.1"
                     /translation="MSVVRFFFILIIVLGLVVVVMNQSISSYIEQKYHFAFYPHNDLL
                     KEANGFKIKLEQIRAILSNEPLPQTNEETTNQESKSTDENLSKIDKVLNTLENDENTS
                     HKETNLTLIQDANISFIDNTKLELQNGDEFLFIGDSLMQGVAIALNRDLRNLNLKVTD
                     LSKQNTGLSYKSYFDWSKATNEAFIKNSNIKYLVVLLGANDPWDIKKGGNYHRFGSLS
                     WIDIYTSRVDEIIKIAKKHKAKVFWFEIPPVKKEDLNKKIQVLNKIYSDEILKNKEIF
                     INTKLFFSVNDEYSAYIKDENNRSIKVRTDDGVHFTPSGAREMSKLLLEHIKLKEENA
                     SK"
     gene            complement(23105..24481)
                     /locus_tag="RJ318_000468"
     CDS             complement(23105..24481)
                     /locus_tag="RJ318_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HDV7430365.1"
                     /translation="MTYFSLEFSILMIAFFAIYWTFKNDYKIQNILILIFSYIIYILI
                     NPYFALVLFIYTFFIHYFALLIFVRRKRYIFATCMAFIILNLCFFKYFPSIKGSVDEI
                     LNFFGLEFLNIDLVLPIGISFYTFTSITYLVEVYQKRRLESFLNLATFLSFFPTLLSG
                     PIMRSSFFFEQAYQKREFKHANLIIILLVFGIVKKVLIANYLGIYAKSILDFPQSYNF
                     IQLLSAIYAYAIQIYCDFSGYVDLVCAFALMLGFTLPSNFNMPYLAKNLKDFWARWHI
                     SLSTFIRDYIYIPLGGNRKGMPRTIVNILIAFILSGMWHGNTLAFIVWGLLHGIGIVF
                     IHLLALSKFSLQKIPALGRFLTFQFVCFTWIFFYYSKNLEDAIEYFKACYYNFFQIPS
                     YNDIYMLVAFGVLFMIYPLFINFKEYCIKILNLTPFLLKPFIIAFILLLVFAFMPDGI
                     PDFIYSSF"
     gene            complement(24524..25027)
                     /gene="ctf"
                     /locus_tag="RJ318_000469"
     CDS             complement(24524..25027)
                     /gene="ctf"
                     /locus_tag="RJ318_000469"
                     /EC_number="1.16.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HDV7430366.1"
                     /translation="MLSKEVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLF
                     AHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFKSLLDVFEKTYEHEQFITKSIN
                     TLVEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYIKN
                     IALSRKK"
BASE COUNT         9114 a         3226 c         4211 g         8529 t
ORIGIN      
        1 ttaaaagagc aaagaaataa tgccttaaaa tccgaacaag agcaaatact tttatggatg
       61 aataatttta attttttaaa agataataac ttaagtttaa ttcaaaaaga aaaagatctt
      121 tttgaaaaag atcttaaaga tcttagagaa atttttaaaa aaaatgcttt tgaaataggt
      181 atttggtggt tttctaaaga aaaagaagac ttagaaaaaa gaataaatga gagtttaaaa
      241 tgagatttga tttttttgtt tcaaagcgtt taaatatcag tagaaataaa gccttagagc
      301 ttatagaaaa tgaagagatt ttacttaatg gtaagagttt taaagcttct tttgatgtga
      361 aaaatttttt agaaaattta aaaaaaacgc aagatttaaa tcctgaagat atacttttag
      421 ccaatgagtt aaaattggat cttttaagtg aaatttatgt ttcaagagca gctttgaaat
      481 taaaaaaatt tttagaagaa aatgatattg aaataaaaca taaaaattgt cttgatatag
      541 gatctagtac gggcggtttt gttcaaattt tacttgaaaa tcaggcttta aaaatcactg
      601 ctcttgatgt gggtagtaat caactccatc caagtttaag agtaaatgaa aaaattatct
      661 tgcatgaaaa tacagatctt agagccttta aaagtgaaga aaaatttgaa cttgttactt
      721 gtgatgtgag ttttatttct cttattaatt tactttatta tattgataat ttagctttaa
      781 aggaaattat tttacttttt aaacctcagt ttgaagtggg aaaaaatatc aaaagagata
      841 aaaaaggtgt tttaaaagat gataaggcaa tcttaaaggc aagaatggat tttgaaaaag
      901 catgtgctaa attgggttgg cttttaaaaa atacgcaaaa atcaagcatt aaaggaaagg
      961 aaggtaatgt tgaatatttt tactactata tcaaaaatta atattacctc tttagccata
     1021 ggttgttttg atggtatgca tttaggacat ctaaaacttg taaaatgttt agatgagaat
     1081 ggggctttat tagttattaa taaatttaag ggtcaatttc tttgttcaaa tcgtcaaaaa
     1141 gaagaaattt caggaaaaaa agttatagaa gtggattttg aaagtataaa atctttagat
     1201 ggtagagatt ttttaagctt tttgaaaaaa gaatttgtca atttaaaatt tatagtggtg
     1261 ggatatgatt tttcttttgg gaaaaataga gcttataatg ctaaagatat tgagtcttta
     1321 agtgggataa aaactataat agttgatgaa tttagcatag acggaatagg tgttcatgca
     1381 agtttaatta aggatttttt atcaaaagca aatttgcaaa aagcaaaaga atttttagga
     1441 agagattata gtatcaaagg gaagatgatt aaaggacaag gtttgggctc taaagaactt
     1501 tttgcgacta taaatttaga ttgtgaaggt tattttttac ctcaaaatgg tgtttatgtt
     1561 actttgttaa aaagtcaaag aaaaacttat aaaagtgtga gttttttagg tgtaagatca
     1621 agcgatgaaa attttgctat agaaagtcat attttagaag aattgggtga aaatttcacg
     1681 caaggagagt tttttgaact cgagtttata tcttttctaa gagagaatca aaaatttcaa
     1741 gatctaaaaa aacttaaaaa tcaaattgct aaagacatag agcaagctag agaattatta
     1801 aggaaaaatg atgaaagatg aactttttaa acaaagccct aaaaaacaat ttgaatttga
     1861 taaaagcgtg gctagtgttt ttgatgatat gatcaatcgt tctgtaccat tttatagaga
     1921 aaatttagaa ctttgtggca atttattggc taaaatttta cctacaaatg caagtgtttg
     1981 cgatttgggc tgctcaagtg ctaatttttt gatttttttg gcaaatctaa gaaaggattt
     2041 taaacttttt ggcgtggata attctgcttc catgcttgaa gttgcaaaat caaaagctaa
     2101 agcttatggg cttgatataa gtttttttga agctaattta tgcgaatttg atttttttac
     2161 ttgcgatgtt tttgtagcaa attataccat gcagtttatt cgtcctccta aaagacaaga
     2221 attgcttgat caaatttata aaaatttaaa ctctaaaggc attttgatta tgagtgaaaa
     2281 aatcctttat gaagatgctt ttttgtctaa aaatatcata gaactttatg ctgattataa
     2341 agaaaaacaa ggctattcta agtttgaaat cgcagctaaa agagaagctt tggaaaatgt
     2401 tttaattcct tatagtcaaa aagaaaattt aaatatgcta gaaaaggcag gttttaagaa
     2461 aatagaaagt atttttaaat gggcaaattt tgaaactttc atagctttta aggattagaa
     2521 atattttcat cttcccattc atcttttgga aaacctatct tatatgcatt aacacaatct
     2581 tgactaatga tagctttgtg tctgcattct aaacttcttt tttttgcttc ctcggggtga
     2641 ttttgataat attctacact tttggtttgt tcgcatgctg caaaaaatat accaataagg
     2701 cttaaaaaaa gagttatttt catggtcatt tttcctgtgt catattaaca tcatcgctaa
     2761 agatagaact ttgattgttt tctgttgttt tggaaggata aatttcagaa ggtgtttctg
     2821 ctataggtgg tattataata ctttcattat tttctgaact ttggttaata tcttttgtgg
     2881 ttttttcttt ttttaaatca ttttgtttta aagcttctaa tatttgatta tcagattttt
     2941 tcggtgtgtt tggactgtat ttaccctctt catttgttgg tttaacacca acttttaatg
     3001 cattaataca atcttcgcta agagttccgc tttctttgca ttctttcgct ttttcttttg
     3061 cttcgctagg aagatttttg tagtaatttt ctgttttact atcacaagct gttatattaa
     3121 taactattaa aattgcaagt aaaatactta gtcttcgcat ttatcaatct cctaaaattt
     3181 ttaatatctt agcaaacttg tataaagcaa cgataaatta tttttcttca ttgtaagaaa
     3241 aaataggtaa agaccattga tatttgatag ctaaaagcct tgcaaaaact cctataaaaa
     3301 gagttaaaag tgtgcaaact agggcattaa gctcaagcca aattattaga gaataataga
     3361 ttgctcctgc aattatggca attcctgcat aaatttcttt ttgaaacacc aaggggattc
     3421 tcatacataa aatatctctt aaaattccac caaaaacacc ggtaattaca gcggcagcaa
     3481 cggctatgat aaagccatgg ttttgatcta tagctatttg agctccaagt atgctaaaaa
     3541 caacaagtcc tatagcatca agagttagaa ataaagtttc aagtttggtt actacgcgcg
     3601 gaatttttgt ggctacaagg gcgcaaaaac agattaaaat aatatattca ggatgtttaa
     3661 cccaagttaa aggataatgt cctaaaagca catctcgtat gcttccgcct ccaattgctg
     3721 ttacgagagc aataaaaata actccaaaaa gatccatttt gtggcgtcct gcagctaaag
     3781 ctcctgtcat tccttctgcg gaaataccta tgatataaag agtggttatc gtaagagcat
     3841 ttatctccat aatttatacc ttaaaattta tcacaattta tttgatactg tttaatattt
     3901 tcatcattta cttcgtggtt tggtgcttga tagcattctt taaatttcgg agttttaata
     3961 attttcacat aaaaacttgg tatagcaata cggtttttaa tgtattgtgg ttctttatcg
     4021 taaagtacta aatttaaaac ttcgatactt tgaaattcta aagctaaatt tctttctctt
     4081 tgttcgattt cattccaaat tttattattt atttgtgcat tttgtggggt aatattactc
     4141 attaaaaata ctgaattttg agcagcttta ctaaagctaa aagaagcatt gggtgcagtg
     4201 tgtcctcgtg tgtaaccact gtttttataa ttactccaag tagtgcggta ttttttagga
     4261 atatttgtat catcttcaaa gcgagggcgt tttttgattt gtctatcttt caaatttgaa
     4321 gcttctacct tataagcaac agcttttgtg cctttgagtt tataatcata gcaatttaga
     4381 taaaaaaact tatctaagat ttgcgagcaa tttatattgt taaaataaga agaaaaatca
     4441 gcactaggct tgtaaggttc taaggcaaaa atattaagag atatagtgag taaaaagatg
     4501 aaaattttca tttaagttcc ttatctttac ttttgcaaag atgatttaaa aagcattctt
     4561 tacataaagg ttttttagct ttacaggtgt aacgtccaaa aagaaccatg gcttgatgaa
     4621 gatagttaag attatcttta aatgtgcgtg ttaaatcttc ttctgtagct tctggagttt
     4681 ttgctttgct aagtcctaag cggtgagaaa ctctaaaaac atgagtatct acagccatga
     4741 aatttgctcc gcaccattct attaaaacta catgagcggt tttttgtcct acgcctgcta
     4801 aggattttaa attttgttca tcaagaggaa tttctccgtc aaaattttca caaactgctt
     4861 ttgccatttt tataagattt tgtgctttat tattaaaaaa tgaacaagtt tgtatatagg
     4921 ttttaagact tgataaattt gcatttgcaa gggatttaat atcaggataa gctttaaaaa
     4981 gatcaggagt gatgagatta actcttttat cagtgcattg ggctgaaagc attacgcaga
     5041 ctaaaagctc atataaattt gaaaatttaa gctctgttac aggcttgtca aaatgtttta
     5101 aaaaaagttc tttgatttct aaatttcttt tcatttttta attttagtta attagcttta
     5161 aaccaagttt agatataatt gattttatat acattttatt aaaaaggaaa cctaatgaaa
     5221 aaattttctt tagtcgcagc aactttgatt gcaggtgtag ttttaaatgt aaatgcagct
     5281 acagtagcta ctgttaatgg caagagcatt agcgatacag aagtaagtga attttttgcc
     5341 cctatgctta gaggacagga ttttaaaact ttgccagata atcaaaaaaa agctcttatt
     5401 cagcaatata ttatgcaaga tttaattttg caagatgcta aaaaacaaaa tttagaaaaa
     5461 gaccctttat acacaaaaga acttgatcgt gcaaaagatg caatacttgt taatgtttat
     5521 caagagaaaa ttttaaatac tattaaaatt gatgcggcta aagttaaagc tttttatgat
     5581 caaaataaag acaaatatgt aaaacctgca agagtgcaag caaaacatat cttagtagcg
     5641 acagaaaaag aagctaagga tattattaac gaacttaaag gtttaaaagg taaagaacta
     5701 gatgctaaat ttagcgagct tgctaaagag aaatcaattg atccaggttc aaaaaaccaa
     5761 ggtggtgagc ttggttggtt tgatcaatca actatggtaa agccttttac agatgctgct
     5821 ttcgcgctta aaaatggtac tattactaca actccggtaa aaacgaattt tggttatcat
     5881 gtaatcttaa aagaaaattc gcaagctaaa ggtcaaatca aatttgatga agtaaaacaa
     5941 ggtattgaaa acggacttaa atttgaagaa tttaaaaaag ttatcaatca aaaaggccaa
     6001 gatctcttaa atagtgctaa agtggaatat aaataatggg tgttttagac attgtaaaag
     6061 caggggtgat tagcggagat gagcttaata aaatttatga ctatgctaaa gcagagggtt
     6121 ttgctatccc tgctgttaat gttgtaggaa ctgattctat taatgcagtt ttagaagctg
     6181 caaaaaaagt taactctcca gttattatcc agttttcaaa tggtggggca aaattttatg
     6241 cagggaaaaa ttgtcctaat ggagaagttt tgggtgcaat tagtggggct aaacatgtac
     6301 atttacttgc taaagcttat ggtgtacctg tgattttaca cactgatcat gctgcaagaa
     6361 aacttttgcc ttggattgat gggcttattg aggcaaatgc acaatataaa aaaacccatg
     6421 gacaagcttt atttagttct catatgcttg atcttagcga agaaagttta gaagaaaatc
     6481 ttagcacttg tgaagtttat cttcaaaaac ttgatgcttt aggtgtcgcg cttgaaatag
     6541 aattaggttg tacaggtggc gaagaagatg gagtggataa tacaggtatt gataattcca
     6601 agctttatac ccaaccagaa gatgtagctc ttgcatatga aagacttgga aaaattagtg
     6661 ataaattttc aatcgcagca agctttggaa atgtacatgg agtttacaag ccaggaaatg
     6721 ttagcttaca acctgaaatt ttaaaaaatt cgcaaaaatt tgtaaaagat aaatttgctt
     6781 taaatagcga taagcctata aattttgtat ttcatggcgg tagcggtagt gagctaaaag
     6841 atattaaaaa tgcagtaagc tatggcgtaa ttaagatgaa tattgacaca gatactcaat
     6901 gggctttttg ggatggggtg cgtgaatatg aacttaaaaa tagggcttat ttgcaaggac
     6961 aaattggaaa tccagaaggt gatgacaagc caaataaaaa atactatgat ccgcgtgttt
     7021 ggttaagaag cggtgaagaa agcatgataa aacgtcttga aatcgctttt gaagatttaa
     7081 actgtataaa caaaaactaa gcattttaaa agcttagttt tattttgttt taaaaatttt
     7141 tatcaaatta agtagcaatc tttaaaataa aatttttaat gaggtattgg tttcatggat
     7201 attaaatcag atgaaatttc agaacttgtt ttgcctgaag gcaaagatgc aagaggttct
     7261 ttggtttatt ttaaaattat ttttattcca gcttttcttt atattttgat tttattgggt
     7321 tattttaatg taattgactt taaggtcgaa ttacatacgg ttattatgac aggtgtgatt
     7381 ttttttacag cattgatttt tgctagacat agtgctgagt atgcgtatag tatttttgaa
     7441 caacaaaaag atgaatttaa acaggcttta aaaagacata ttatgaggca ttttcttgcc
     7501 atagggaaag acacgaaatc aaatgccaat tttgatgact ttgcttatac atatattaag
     7561 ggtgcaagaa atgagaattt tgctagtata ggttcggcaa tttttccaat gatgggaatt
     7621 ttaggaactt ttatcagtat agctttttca atgccaaatt ttagttctag tgatacagcc
     7681 gctttagaac aagaaattgc agatttgtta agtggagtgg gaactgcttt ttatgtttca
     7741 atttatggaa tttttcttgc attatggtgg atgttttttg aaaaatatgg taaaagcaaa
     7801 atagatcgtt tgctaaatcg tcaaaaaaac gctacaagtg gatttttttg gacaaaagaa
     7861 gagcttgatc aaagatattt aactgaaagt ttgcaacatt ttgaaaaaat tggagcaatt
     7921 tttaaacaag ttagtaatga tgattttttt gcagagcttg atcatgctat tgatagaaag
     7981 tttggtattt tccaagatat gctaaatgta gaagaaaagg ctattagatt aagtagtgaa
     8041 catatcaaac aaaccatggg tgagcttagt aaagcacaaa gagatcaacg cgatcttgga
     8101 aagctttata gtgaaatgtt aaatggtata ggtttgctca atcaaaattt aaaagaaatc
     8161 aatacaagaa tgtcagaaca atataatcgc ttgcttgata tcagtagtga taaaattcat
     8221 catcttgata agacactaag tgcattcgat gaaaaaatag agcgttttgg taaaaatttt
     8281 gaactttatg aaaaagcaat gttggaaagt caagaaaagg tttttgaggg atttaaagca
     8341 agcttgtttg aaggtatgca taaatttaaa gaagtatatg aagaagaaaa aagtattgat
     8401 gctaaaatca aaatgatgga tgagcttaaa aaagaaatga aagcacttga tgaagaaaca
     8461 agtcaaatga tgagcaagct ttctggggat gaaaatcaga ataaagaaaa tgaaaccaaa
     8521 caaatagaag atttttcaga gtctaagact gaagaaaatc aagatgaaat tcaagcagaa
     8581 atatctaagc aagaaagcaa tgatgagcta aaaaatgaag ataaagaaaa taaatgaaaa
     8641 atgagtcaaa agaagatagc aatttttgga tagcttatgc tgatttaatg gcaggattgc
     8701 tgtttgtttt tattttgcta ataggtgcta ttgttgtaaa atatgtttta actcaaagtg
     8761 atttaaaaga aatcaaagat aatctcaata aacaagaggc acgcttagag gagagtaaag
     8821 aagagcttag aaataaagaa gccatagtgt ttaaactaag ttctgattta aacaatgctt
     8881 ctagtgcttt aaatcttgct aattctcaaa aagcagaatt agaggctaat attacaaatt
     8941 acaagcagtt aagtaaagat ttaaactcaa ctttagataa taaagataag caaattttga
     9001 ttttactagg tcaactagag aaaaaagatg aagagcttaa aaatttacaa gaagattttc
     9061 aaaaagctaa agaaaaggtg caaaatcttg gtttgattcg tgaaaattta agcaaggaat
     9121 tacaaagtaa gcttgataat aatatcacta tagatgaaaa gataggatct atttctttgc
     9181 ctgctgaagt actttttgat aaagattctt atgtgttaaa aaatgaggca aaggcaagtt
     9241 tgagaaaaat cttaagcgaa tattttgatg ctattcttga agatccaaaa attttttcta
     9301 acattgaaaa tatcattatt gaaggacata ctgatagtga tggatcttat atttataatt
     9361 tagatttgtc gcaaaaaaga gcttatgagg tgatgaattt tatctatact ttttataaga
     9421 gtgataagct tcaaaagctt ttaatggcaa gtggacgttc tttttcagat cctgtgtttg
     9481 tcaacggagt tgaagataag gataagagtc gtcgcataga aataaaattt agcattaaaa
     9541 atgataatgc tttaaaggat gtagaaaaat tctttgaatt tcattaaaac aattagtcct
     9601 atacaaaaaa tcaattttaa cggatttgaa ttttatatta aaagagatga tttattaggg
     9661 gaaattaatg gaaataaagc taggaaactt gctttttata tccatcaaag atatcctaaa
     9721 aatcaatctt ttgtaagtta tggaggaagc caaagtaatg ctttggcggc attaagtatt
     9781 tttgctaaac aaagatcata taagcttgtt tttgcttgtg aaaaaatttc tacttttctt
     9841 aagaataatc cttgtggaaa ctatgcttta gctttagaaa atggtgttga ttttgtagaa
     9901 aatatccatt ctttatcctt aaagcaattt gctttgtctt tgtgtaaaaa agatgatgtt
     9961 tttatagaac aaggtatagc taatttagaa gctcaatatg gctatatgga acttgctcaa
    10021 gaaattcaaa tgcaaagtca aagtttaaag cttgattttg atattttttt accttcgggt
    10081 acaggcactt cggcagcttt tttggcaaag tattctaaat ttaaagtatt tacttgcgct
    10141 tgtgtaggtg atattaaata tcttaaaaaa caaattttaa cattagatcc aagctatgat
    10201 ttttcaaatt tagaattttt aacaagtgat aaaaaatatc actttgctaa gccgtataaa
    10261 gaattttatg agctttatat ggatttaaag ttaaagtgca atatagaatt tgacttgttg
    10321 tatgatattt taggattaag tatagcatta aaacaagagt ggaaaaaacc attgctttat
    10381 atacatcaag gtggaatttt aggaaattcc actatgttag agagatataa atttaaaaaa
    10441 tcagtttaaa attccataga taaaaatgat taaaataatc aaaggtacta tatattttac
    10501 ataataaaac caaattccaa accatgaact tttaagtgta ttgttattgc taagttcttt
    10561 tagactttct tgtttgccta aaatccaacc tacataaata cagcaaaaaa atgcagttaa
    10621 aacaaacaaa atatttccac taatgaaatc aaaactatca aaaatgtttt ttcctttgat
    10681 gataacaata tcacgccaag gcccataagt tagaatacaa ggaagattgc caagtatgaa
    10741 gataaaccct agagttaggt taatagaaag atttttagaa tatttaaatt tttcttctaa
    10801 tacgctaata ataacttgat aaattggcaa gcttgtggtt aaagctgcaa tcaagagtaa
    10861 gacaaaaaat aaaatacaca caatagtgcc aaaatggata tgagaaaatg ctataggtaa
    10921 agtttcaaaa accaaagaag gcccgctatc tggagcaagt cccgctgaga aaagtgctgg
    10981 aaaaatcata aaaccagcca aaacagctat gatagtattt aaaacccctg tataaatagc
    11041 ggtttttgcc atattttcat ttttattaag atgagatgaa agtgttatca ttaccccaaa
    11101 acctagggat aaagcaaaaa agacttgtcc taaaacatcg attaaaagtt ttggtgataa
    11161 aattttacta aaatcaggtt caagataaaa tttaactcca gccatagctc catcaagggt
    11221 taaattgcgt cctacaacaa taataagaca gataaataat aaaggcatta aaaattttac
    11281 ggatttttct ataccatcta taatgcctct ttttaaaata atataattaa taattacaaa
    11341 aacagtggta aaaataccaa ctcctaaagg attgaaggct attttgtcgt taaaaaactg
    11401 atgagtaaat tctttgctta ctacattggc aagactaaaa ttccctaggg ttaattccca
    11461 aatataaact aaaacccatc ctccaagtac catgtagtaa gccattatgc caaagcttcc
    11521 taaaagtccc atatatccaa tactttgcca tttttgtttg aaagcatcta cgctatttgt
    11581 catcgctttt ctgcctatga cattttcaac taaaataaca ggaatgccta tgataatcat
    11641 ggctatacaa aaaactaata cataagcacc gccaccattt tctcctacaa gatagggaaa
    11701 acgccaagtt gctccaaatc ctatggttgc tccagcaact gttagaatat aagttagtgt
    11761 gctactccat gtttgtcttt gcatgattat cctttcgaaa aagaattatt ttacctaaaa
    11821 ataactttaa aaacttataa gctatccata tagcttatat cgtaagtatt ttttaagcgt
    11881 ttgtgtatcg tttcgtgcca attttgagat atgagagagt ttaatttttc taatttatct
    11941 aataaattcg gattttgctt aagaatttga tgcggggagt aaaaaagttg attgagttca
    12001 aatacactaa gtgaagtaga atttttttct aaaattttaa tgttttcatg ctttcgtatt
    12061 tgtccaactt gtaaaacttt ataataccat ccactcaagc ccgttttaaa aatttcatgt
    12121 gtaaaatttg gattattgtg aattttagaa atttttacac aaggttttct aggttcgctt
    12181 acttgcagta ttgcatttga aaattgatgt atatcaccta tgcaaacatt ttgttcacaa
    12241 agcccatcga tgctcaaatt ttcacccatt gagccaaaat ttagcttttt attaagaaat
    12301 ctttcccata taggatagtt ttgacaagag ttggtaaaaa tagccttatg gtagcctcca
    12361 tgatgaattt tatcagctat ttgatcatct aaaacaccta gaaaatcaat ttgtgtttct
    12421 tctaggtaag tatctttaat aaatgcgctt tggaaatttt tatagttttt aattttccct
    12481 atttgcaaac tttgaatttt catggttcta ttttttttaa taaatcatca gcactgataa
    12541 aacccgtgat ttttaatttt tcttttccat tttcaaagaa aattaaaaca ggtgggccaa
    12601 aaacattaaa ttctttcatg gttttaattt gttcattatt attttcgctt acatcaactt
    12661 tgataagttt gtaattttgc attttttgta tgattctttc atcgctaaag gttaattcat
    12721 ctaaaagttt gcaattttca caccaagatg cagtaaaatc aagcattata ggctttgtat
    12781 ttgtttgtat ttcttgcttt aattgttcaa aattgttgat ataatcatag cttaaagcat
    12841 gttttgaggc agatatagta ttgaaattta aaggatttaa gaaattttta gccccaaaaa
    12901 gtcctcctag gaaaatactt agagaataag ctaaaataag aattaaaata ctttttttaa
    12961 ttttagaaat tattgtaaaa cttttttcaa aaattcccat aaaaacacta aaaaatacac
    13021 ctaaaattcc ataggcaatt aaaatgtaat tttcttcaat aattctagaa agtatccaaa
    13081 tagccatagc caacataaca aaaccaaaga aaatttttac tttttccatc caaaaaccag
    13141 gtttaataaa acctaatcct aagcctatga aaagcaaagg tatacccatg ccaaaactca
    13201 tgataaaaag tgcactacca cctaataaag cattgcctgt attggctata taaattaaag
    13261 cacctgctaa aggagctgct acgcaaggac ctactattaa agcagataaa aatcccatga
    13321 tggctatacc tacaactccc ttcccttttt cgcttttttt atgtataaag gtttgaaatc
    13381 ttaatggcaa ttcaaaacga aaagctccaa acatagcaaa agcaaaagct atgaaaatta
    13441 gagcaaaaag aattaaaata ataggttttt gtaaaattcc ttgaatactt gctcctagaa
    13501 aacttgctat aactccagca atagcatagg ctaaagacat gaaaaaaaca tagataaaag
    13561 agagaaaaaa actatatttt tttgaaaatt tagcattact ttttgctacg ataagagaag
    13621 ataaaatcgg aatcataggt aaaatacaag gtgttaagga gagtaaaagt ccatagccaa
    13681 aaaaacttag caaaatccaa aaaaagttat ctgttgctaa aaaatttgct atagagcttt
    13741 cttcagattc aattttagtt tttttatctg ttttttgagc tttgtaaggt tttgaaattt
    13801 caaaagcatc ttttttagaa atgagatcaa agtaccaagt ttgaggatta taacacaagc
    13861 cttgttcaga acagccttga aattcgagtt tgattaaatt tgtggtattt tttgcaaagc
    13921 gctctagtaa taaatttggc aaagctaaat ttaatttttg ataataaaca ttttcattac
    13981 ctcttgtaga actttgaggt agattaatca aagaacttat atctttttcg tttatatata
    14041 atttaagttt attagaataa agataaatat cttttccaag ttcaatatca attgagatag
    14101 agttattata agagtttgat tttacattaa aagcttcatt taaagataat atagaagcaa
    14161 aacataaaca aaaacttaat aaaataatac caaaaatacg cataaatttc ctaaaaactt
    14221 attttttcct ttatttttaa cttcaattat aatttattat ggtaaattta ctttaaatac
    14281 tttataaagg tttgaaaatg caagaaaata attctccaaa agcgcaagcg gttgttaaaa
    14341 agaatgaaat ttatgtttct gttaaaagaa agaaaagtac aatagaatat gaaaaagatt
    14401 taaagaattt gcaaattgag cttttgaaat ttcaaaatca tgttaaagcc aagggtttaa
    14461 aggttcttat acttatagaa gggcgtgatg cggctggaaa aggtggggcg attaaacgtt
    14521 tgattgagca tttaaatccg cgtggttgcc gcgttgtggc tcttgaaaaa cctagtgatg
    14581 tggaaaaaac acagtggtat tttcagcgtt atatagcaca tttgccctca gccggtgaga
    14641 ttgtgatttt tgacagatct tggtataatc gtgcaggagt agaaccggtt atgggttttt
    14701 gtacaccgca acaacataaa gattttttaa gagaagtgcc tttgtttgaa aatatgattt
    14761 caaatagtga tattattttt tttaaatttt atttttcagt atcaaaagac gagcaaaaaa
    14821 aacgttttga aaaacgccga agcgatccac ttaaacaata taaattatct cctgtggatc
    14881 aaaaatcgca agaattatgg gataaatata ctttagctaa atactctatg cttttagcat
    14941 ctaatactcc aacttgtcct tggactatta tttcttctga tgataagaaa aaagcaagat
    15001 taaatttatt gcgttttata ctttctaagg tagaatatcc aaataaaaaa actggagatt
    15061 tttccaaaat tgatgcaaaa ttagtgcgta gtggagaaga agaaatacga aaaatggagg
    15121 cgaatttgga aaaacttgac agtaaaaaag cagatgagaa aataaaagat ttagattaag
    15181 gaaaagaatg caaaagctgg ttgaaaattt agcactaaag tactatgata aagtagttga
    15241 tttaagacat caaattcata tgcatcctga gcttgaattt gaagaagaaa atacagccca
    15301 tttagtgtgt aaaattttag atgagtttgg cattaaatat caaaaaaata ttgcaaaaac
    15361 aggaatttta gctattatag aaggaaaaaa gaagagtcag aaaaaaccaa aatgtgttct
    15421 tttaagagcg gatatggatg ctttgcctgt gcaagaaaaa actaatctaa gctatgcttc
    15481 aaaaattgat ggtaagatgc atgcatgtgg acatgatgga catacagcag ggcttttggg
    15541 agctgctttg atattaaatg agcttaaaga tgaattttgt ggcacgatta aatttatgtt
    15601 tcagcccgca gaagagggaa gcggtggagc taaacctatg atagaatcag gtgtattgga
    15661 aaatccttat gttgatgcag tttttggttg tcatttatgg gggcctttgc ttgaaaatac
    15721 tgctcaaatt gtaagtggtg aaatgatggc tggaacggat atttttgatt tggaatttat
    15781 tggcagagga gggcatggag ctcatccgca cacttgtata gatcctataa ttatgacaac
    15841 gcaatttgta aataatatac aaagtgttat ttctagacgt ttagcccctt atgaagcagg
    15901 ggtgattacc gtaggtcaaa tttgtgcagg aactacttat aatgttattc ctacaaatgc
    15961 ttatttaaaa ggaactgtgc gctttttaaa tgataaaacg caagatattt taaaaagttc
    16021 tttagaagaa gtggctgctg ctacagcaaa atccaatggc ggagattata agcttaaata
    16081 tactaaagaa tttcctccat tgattaatga tgaaaatgct gctttaatag caagaaaagc
    16141 ttttgcaaag gtcttaggag aagaaaatat cattgtttct tctaaacctg acatgggggc
    16201 tgaagatttt gcttttttaa cacgagaaag aatgggagct tatgtatttg ttggaatttc
    16261 aaaggattta aatcatccag ctttgcacca tagttctact ttttgttggg atgatgaaaa
    16321 tttaaaagtt ttaatgcagg gtgatgtgat gatggcttta gaatttttaa atttataaaa
    16381 tagaattaaa aattcacaaa aaattcacaa aaaatgagta aaatttaatc ttgatttttc
    16441 tttaggattt gttattatga aaaagaagat tgttttaatc attttaattg caatacttgg
    16501 aagtgttgag gcttatttta ttttttttaa taatgatgaa aaaatcagct atttaactca
    16561 aaaaatacaa aaaaaagata tatctcaaac catagaggca gtaggaaagg tatatgccaa
    16621 agatcaagtc gatgtgggtg ctcaagttag cggacaaatt ataaaacttt atgtggatgt
    16681 gggaactcat gtaaagcaag gtgatttgat cgctcaaatt gacaaagata aacaacaaaa
    16741 cgatttagat attacaaaag ctcagcttga aagcgctaag gctaatttag agagtaaaaa
    16801 agttgctctt gagattgcga gtaagcagta tcaaagagag caaaaacttt atgcagctaa
    16861 agcaagttct cttgaaaatt tagaaactca aaaaaataat tattatactt taaaagctaa
    16921 tgttgcagag cttaatgctc aagtagttca gcttgaaatc actcttaaaa atgcacaaaa
    16981 agatttaggt tatacaacca ttactgcccc tatggatggt gttgtgatta atgtagctgt
    17041 agatgaagga caaacggtta atgctaatca aaacactcct actatagtcc gtatagctaa
    17101 tttagatgaa atggaagtaa gaatggaaat agcagaggct gatgtgagta agataaaagt
    17161 aggaacagag cttgattttt ctttgcttaa tgatcctcaa aaaacttatc atgctaagat
    17221 tgcaagtata gatccagctg atactgaagt gagtgattct agtacaagct caagctcatc
    17281 aagttcgagt tcttcaagct caagctcatc aaatgctatt tattattacg caaaatttta
    17341 tgtagccaat aaagatgatt ttttgcgtat tggtatgagt atacaaaatg aaattgtcgt
    17401 agcgagtgca aaggctgttt tagcagtgcc aacttatgca attaaaagcg atccaaaagg
    17461 ttattatgtt gaaattttag aaaatcaaaa agctgttaaa aaatatgtca aacttggcat
    17521 taaagattct atcaatactc aaattttaga aggcgtaaat gaaaatgaag aattgatagt
    17581 aagctcaagt gctgatggct tagccactaa aatgaagttg agattttaat gatttttctt
    17641 aaaaatattt gcaagaatat aggcgaaaat gccattttaa aaaatgtaag tttaagtata
    17701 gaaaaaggtg aatttgttgc tattatagga caaagtggaa gtggtaaaac ttcactttta
    17761 aatatcatag gaacattaga tacgccaagt agcggaactt atgtttttga tgagtatgaa
    17821 gtcactaaac ttaataacga tgaaaaagca agattaaggc gtgaaaaaat aggctttata
    17881 tttcaaagat ataatctttt aagcttgctt agtgctaaag aaaatgtttc tttacctgca
    17941 gtttatgcgg gaaaaaattt acaagaaaga agtcaaaatg ctaaaaaact cttaaatgat
    18001 ttagaattag ctcacaagtt agattctaag ccaaacgaat taagcggagg gcagcaacaa
    18061 cgcgtttcta tagcaagagc tttaatcaat ggcggagagc ttattttggc tgatgagcca
    18121 acgggagctt tggatagtaa aagcggtatt atggtgcttg aaattttaca aaaacttaac
    18181 gagcaaggtc atactatagt cttagtaact cacgatccaa aaattgcagc acaagctaaa
    18241 agggttatag agattaaaga tggagaaatt ttaagcgata ctaaaaagga aaaagctcaa
    18301 gaaaaactta ttttaaaaac aatgcccaaa gagaaaaaaa cacttacttt gcttaaaaat
    18361 caagcctttg aatgttttaa gatagcttat tcttccatac ttgcacataa acttcgttct
    18421 attttaacta tgcttggaat catcataggt attgcttctg tagtttgtgt tgtagcttta
    18481 ggattaggct ctcaagctaa agtgcttgag tctattgcaa gacttgggac aaatactatt
    18541 gaaattcgcc ctggaaaagg atttggggat ttgcgttcgg gtaaaacaag acttaatttt
    18601 agtgatttag aaacattaag atctttagaa tatttagaag cagttgatgc tcattcaaat
    18661 acttcaggag tggcaactta taccaatatt tctttaagcg caagagctga aggagtaggg
    18721 gtaaataatt ttgctataga aggtttaagg atagatgcgg gaagaatttt aaataatgat
    18781 gatgtaaaaa atagtactaa tgttgctgta ttggatttta atgctaaaaa aaatcttttt
    18841 cctgatgaaa aaagtgaaaa tattttaggt cgtgtggtgc tttttaattc tcaacctttt
    18901 aagattatag gagttttgca aaaagataca gacaagccta tagaagataa tgtagtacgt
    18961 ctttatatac cctatacaac actgatgaat aagcttacag gagatagaaa tttgcgtgaa
    19021 atcatagtta aggttaaaga tgatgtgagt tcaactttgg ctgaaaatgc tattataaga
    19081 attttagaaa ttaaacgcgg acaaaaggat ttttttactt ttaattctga cacttttaag
    19141 caagctatta cagcaaataa acgcactaca accatactta ccgcttgtgt ggctgtgatt
    19201 gctttgattg ttgggggtat aggagtgatg aatatcatgc ttgtttctgt aagtgaaaga
    19261 acaagagaaa taggcatacg catggctata ggggctagaa gagaagatat tatgatgcag
    19321 tttttaatcg aagcggttat gatttgtact ataggggcga ttttaggtgt aattttatcg
    19381 atttttgtta tttttgcttt taatacttta agtacggatt ttcctatgat tttaaatgcc
    19441 tattctgtgc ttttgggact tttaagttct atgcttattg gcgtgatttt tggttttttc
    19501 cctgcaagaa atgcagcaaa tttaaatcct attagtgcat tgtcaaagga ataaaatgaa
    19561 aataatactt agcatttttt tagcattttt cttgagcgct tgtggtgtaa aacttagctt
    19621 gcctaaagaa gttgatttaa ctcaagaaca aatgaaagat ttaaatctta cttatgattg
    19681 gtatagatct tatgataatg caaaattaaa tgaatttcta aattttgttt tattgaataa
    19741 tagtgatatt aatattgcta gaaaaacttt gctttcggct ttggctagag ctgatttgat
    19801 tgattatgat ttatatccga ctttaagtgg aaatttgggt tttggtggag ataaagattt
    19861 aaattcaggc aaacaaagta aaaatttcaa taattcttta aatttaagct atgagcttga
    19921 tatttatggc aaattaagag atagtgcaag tgcgagtgaa tttagtgcaa aagcaagtgc
    19981 ttatgatctt gaaaatttaa aaataagtat gatcaataca gctttaaatg atgtgtttga
    20041 gctggcttat tttaacgatg tagataaatt gcttcgagct tatctttcaa atttagaaca
    20101 aatgaaagag ctttataact ataaatacaa gcttggaaaa atagaagaat tagatctttt
    20161 aaacatagaa caaagcttat taagagctaa acaaaattta ttaagcaatg atcaaaatcg
    20221 taatttactc ataaaaaatt tacaagattt attggcaagg caagaaggtt ttgcttgcat
    20281 agagtatttt aaaactttat ctttaaatga ttttaaaacc ttaagtcctg attttaatat
    20341 acctttaaaa gctttagcgt accgtgcaga tgtgagatct aaactcaata gcttaaaatc
    20401 agcctttaag gattattctt ccatgcaaaa atctattttg cctagtattt ctttaggtgg
    20461 agcattaagc ggaagtgata aaaaaatcga tgatagtttt aaatttgaaa ttttaagtgg
    20521 caatgttaag atttctttac ctttcttaga ttatggtaga gtaaagcaaa atatcaaaat
    20581 ttcacaattt acttatgagc aacttttaat ttcttatgag caagccttgc aaagtgcgat
    20641 gaatgaattt gcattgaatt ataaagatta tcaaagcgac accttgcttt tgcaaaattt
    20701 gcaaaatatt aacattaaac aagagcttat cactaaggcg tattatgaaa aatatatttt
    20761 aggaaaaagt gaattaaaag attatttgga tgcaaacaat actttaaatt ctacccagca
    20821 agaattttta agagctagat ttaatctttt aaaaaccatt aattcttact atcaaatcac
    20881 agctttaagt tttaatgatg aaaacttaga atttcttaag tattaaattt aataatcaat
    20941 gatatttttt aaatcctcga gtaacttttt agccatcagc tcatagcctt ttatagtaag
    21001 atgtacatca ttgagcgaaa gcttttgttc tatccatttg ttttttcccc cactatcttg
    21061 cataaactga tgcatatcaa aaataagagt tttttcttct ttagcaactt catataatgc
    21121 tttgcgtatg gtaaaaaaat caggagcaag cttgtagttt ttaccttgtt tttgaactac
    21181 agttggtgga gagattagca tgataacagc gtttttattg taagttttta aaatactaat
    21241 ccattttttt aaattatttt tgaatttttg tttttcaaac cctttaaaga gtgcatcatt
    21301 agaaccatag gcaagaataa ttaaatcatt gtgtaaaagt cctagttctt tttttacaac
    21361 tgtttgattc caagagagcc ataaatcact tttggcacca ttgattgcaa tggtatctaa
    21421 gaaaacatta ttatctttat ttgtgatgaa atatcctcct agctcagcat ctttttgtaa
    21481 ggctgaaatt tgcaaaggaa gatcaagttc tagttcttta taagaccatt tgttaatttg
    21541 tgtagttctt aactcatagc tttggttttt tgcatctttg atgctaaaag cattggtatt
    21601 ttgcttggct ttaaataaaa atcctatttt gaaatttttt ttatctaggg ttgtatcaag
    21661 gttgattttt gcgcctttag tttttgcttt ggctattatc ccacctaatg gaaaattatg
    21721 tccagcatta gcaggatttc ttgagtttaa aatttcaaag tttttataag aataaacaag
    21781 attaagattt tgttgatatt taggctgtaa aggataggca aaacctatag agttagagcg
    21841 gattaaatat cctcttatga cacgcggaaa gaaatcagcc gccatatgag aatctccata
    21901 aattctaatt cctatgtttt gatttttttc taattttttt tctagatttt taagatcttt
    21961 ttttaataca taacttgtta aagcagagtg atttttgttt tgattgagta tggaatctat
    22021 tgtgtcattt gtatttaaat tttgtgcata agagctagta aaaataataa aaaacaataa
    22081 gataatttta aatttattta ctagcatttt cttccttaag ttttatgtgt tctaataaaa
    22141 gtttagacat ttctcttgcg ccacttggag taaaatgaac cccatcatct gttcttactt
    22201 ttatacttct attgttttca tcttttatat aagctgagta ttcatcattg acactaaaaa
    22261 atagcttagt gttgataaaa atttctttat ttttaagaat ttcatcgctg taaattttat
    22321 tgagcacttg tatttttttg ttcaaatctt ctttttttac aggagggatt tcaaaccaaa
    22381 aaactttggc tttatgtttt ttagcgattt taatgatttc atctacacga cttgtgtaaa
    22441 tatctatcca agaaagggag ccaaaacgat ggtaatttcc tcctttttta atatcccaag
    22501 gatcattagc gccaagaaga acaacaagat atttaatatt tgagttttta ataaaagctt
    22561 cattggtggc ttttgaccag tcaaaatagg atttataaga aaggcctgta ttttgtttac
    22621 taagatcggt taccttaaga tttaaatttc ttaaatctct atttaaggct attgcaacac
    22681 cttgcattaa agaatctccg ataaataaaa actcatctcc attttgtagc tctaatttgg
    22741 tattgtcgat aaaactaata tttgcatctt ggattaaggt tagatttgtt tctttatgag
    22801 aagtgttttc atcattttct aaagtgttta gaactttatc tattttactt aagttttcat
    22861 ctgttgattt actttcttga tttgtagttt cttcattggt ttgaggcaag ggttcgttgc
    22921 ttaaaattgc acgaatttgt tctaatttaa ttttgaagcc attggcttct tttaaaagat
    22981 cattatgagg atagaatgca aaatgatatt tttgttctat ataagagcta atgctctgat
    23041 tcataactac aacaaccaag ccaagcacta taatcaaaat gaagaaaaat ctaactacac
    23101 tcatctaaaa actcgaataa ataaaatcag gaattccatc tggcataaaa gcaaaaacca
    23161 aaagtaaaat aaaagctata ataaaaggtt ttagcaaaaa tggagtaaga tttaaaatct
    23221 taatgcaata ttctttaaaa ttaataaata aaggatagat cataaaaaga accccaaaag
    23281 caaccaacat atagatatcg ttataagatg gaatttggaa gaaattataa taacaagctt
    23341 taaaatattc tattgcatct tctagatttt tgctatagta aaagaaaatc caagtaaaac
    23401 atacaaattg aaaggttaaa aatcttccta aagctggaat tttttgtaaa ctaaatttgc
    23461 ttaaagctag caaatgtata aaaactatgc caataccatg caataaaccc caaacaataa
    23521 aagcaagtgt attgccatgc cacatacctg aaagtataaa agcgatgagt atgttaacta
    23581 tagtgcgtgg cattcctttt ctattgcccc ctaaaggtat atagatataa tctcttataa
    23641 aggttgaaag actgatatgc catctagccc aaaaatcttt taggtttttt gcaagataag
    23701 gcatgttaaa gttagacgga agggtaaaac ctaacattaa agcaaaagca caaactaaat
    23761 caacatatcc gctaaaatcg cagtatattt gaattgcata ggcgtaaatt gcgcttaaaa
    23821 gttgtatgaa attataagat tgtggaaagt ctaaaatact tttagcataa attccaaggt
    23881 aattggctat taaaactttt ttaactatac caaaaacaag caagatgatg attaaatttg
    23941 catgtttaaa ttcgcgtttt tgataggcct gttcaaagaa aaaagaactt cgcataatag
    24001 gccctgaaag tagtgttgga aaaaatgata agaaggttgc taaatttaaa aaactttcta
    24061 aacggcgttt ttgataaact tctacaagat aagtaataga agtaaaggta taaaaactaa
    24121 ttcctattgg taatactaaa tcaatattta aaaattctaa accgaaaaaa tttaatatct
    24181 catcaacact tcctttgatg ctaggaaagt atttaaaaaa acataaattt aaaataataa
    24241 aagccatgca agtagcgaaa atataacgct tgcgacgcac aaaaattagc aaggcaaaat
    24301 agtgtataaa aaaggtatat ataaataaaa ctaaggcgaa ataaggattg attaaaatat
    24361 aaataatata agagaaaatt aaaattaaaa tattttgtat tttgtaatca tttttaaaag
    24421 tccaataaat agcaaaaaaa gctatcatta aaatactaaa ttctagagaa aaataagtca
    24481 taccttcaat ccaaagcgag atttgcccat agtagggcaa agattatttt tttctgctta
    24541 atgcaatatt tttgatgtat tgatcagcta aataaagtcc atttccgtgt tctccgatta
    24601 atttaatctt gtcaactata ccgcggaaaa gtgcttcttc ttcgtgttgt tcgcttacat
    24661 accattgtaa gaaattaaaa gtagaatagt ctttatgtgt tagcatgtgt tcaactaaag
    24721 tattgattga ctttgtgata aattgctcat gttcataggt tttttcaaaa acatcaagta
    24781 aagatttgaa attttgttca ggctgtttta cttcttgaag ctctacatga gaatctgttt
    24841 cattaagata agtgataagc tttttagcat gatcgctttc ttcgcttgca tgtgcaaaca
    24901 agaaggctcc agctccatca agactgtttt catagcacca agaactcata ctaagatata
    24961 agtttgctgc atacatttct ttgtttattt gttcattgag taattttaca acttctttag
    25021 aaagcattct tatctcctta ttaaaattta aaatgtttta taatgatata ttattttttt
//
LOCUS       DAPIYB010000015        24794 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.015, whole genome shotgun sequence.
ACCESSION   DAPIYB010000015 DAPIYB010000000
VERSION     DAPIYB010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24794
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.015"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            58..834
                     /gene="surE"
                     /locus_tag="RJ318_000470"
     CDS             58..834
                     /gene="surE"
                     /locus_tag="RJ318_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDV7430367.1"
                     /translation="MKEILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSAC
                     SHSITLTKPLRFVKVGKRFYKLDDGTPADCVYLALHALYKKRLPDLVISGINKGANVG
                     EDITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDYKNALQITKKIIQNIFDKGFP
                     LEKKEFLNINFPAKSKIKGIKICKAGKRVYNFEAHSNVNPRGVEYYWLAAANLDFEDE
                     KNSDIALLKKGYATITPIMLDLTAYERMKKVKKWLKANDE"
     gene            824..1483
                     /locus_tag="RJ318_000471"
     CDS             824..1483
                     /locus_tag="RJ318_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDV7430368.1"
                     /translation="MMNDRFTRIKWLVGEEKFQKISQTKVLVCGLGGVGGICVDALYR
                     SGFKNLTLIDADKFEITNQNRQIHSENIGEEKAKVFERIYKVKGIVSKIDENFLKNFD
                     LSEFDLIIDAIDDIPAKVALAHLIDFKKQIFISSTGGARKLDPTRIKTTSIFKTHGDA
                     LAKKFRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLALRKVLAKK
                     S"
     gene            1467..1895
                     /locus_tag="RJ318_000472"
     CDS             1467..1895
                     /locus_tag="RJ318_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7430369.1"
                     /translation="MLRKADIKDLNACLSLFEQSVKTLCAWIKIDRQQWEEKFKYDEI
                     FVYEKRGKIASFISVKQEQKLLDLLFTHPDFVRQGLAQNLLDFILKTYLHNEIYTFAS
                     LSAKDFFLKNGFELIRENKVIKEGQNLKKILMKKDVIYKN"
     gene            complement(2005..2385)
                     /locus_tag="RJ318_000473"
     CDS             complement(2005..2385)
                     /locus_tag="RJ318_000473"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDV7430370.1"
                     /translation="MNITLLKSKIHRASVTEARLDYIGSISIDEKLLQASGILEYEKV
                     QVVNVNNGARFETYTIATQEEGVVCLNGAAARLAEVGDKVIIMSYADFNEEEAKTFKP
                     KVVFVDENNTATKITNYEKHGAIF"
     gene            complement(2382..3230)
                     /locus_tag="RJ318_000474"
     CDS             complement(2382..3230)
                     /locus_tag="RJ318_000474"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDV7430371.1"
                     /translation="MQVITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA
                     KTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMYLKNF
                     STYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMV
                     DDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLAISQSIFLAEKLVREGEKN
                     TSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNF
                     LVQGLK"
     gene            complement(3241..4065)
                     /gene="panB"
                     /locus_tag="RJ318_000475"
     CDS             complement(3241..4065)
                     /gene="panB"
                     /locus_tag="RJ318_000475"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDV7430372.1"
                     /translation="MRKSMISFLEKKAKNEKITMVSAYDYHSARILDNSDIDIILVGD
                     SLAMTVLGMQDTLSVTMDEMLIFTKAVSRGAKKSFVLADMPFMSYQSSDRDAILNASR
                     FIKESHANGVKVEGGIEIASKIKLISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQS
                     AQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHD
                     LLGLNKDFKAKFVKHFDKIDPQVGVEKYRDEVKSGIFPSQEHSFDYLDDELLDKLY"
     gene            4285..5058
                     /locus_tag="RJ318_000476"
     CDS             4285..5058
                     /locus_tag="RJ318_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-61 family class D beta-lactamase OXA-193"
                     /protein_id="HDV7430373.1"
                     /translation="MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWAS
                     NDFSRAMETFSPASTFKIFNALIALDSGVIKTKKEIFYHYRGEKVFLSSWAQDMNLSS
                     AIKYSNVLAFKEVARRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAIL
                     LFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDEN
                     KYKAFALNLDIDKFEDLYKREKILEKYLDELVKKVKNDG"
     gene            complement(5143..6027)
                     /locus_tag="RJ318_000477"
     CDS             complement(5143..6027)
                     /locus_tag="RJ318_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HDV7430374.1"
                     /translation="MIRIDINHPMNTAKGRLDLNFKKDIESGKITALFGESGAGKTTL
                     LKIIAGLIKPKLGRIEVDNELWFDSSKNFSLALQKRKIGFVFQDYALFPNMNIKENIA
                     YAASSKAKVSELLALMKLENLAKIYPKHLSGGQAQRVALARALAREPKILLLDEPLSA
                     LDFKMRANLQDELTKILEYFKISTLLVSHDLAEIYKLSHRILELKNGKIIKDFPKNEF
                     FTHSNISAKLRLSATLLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKAYQDVKIGDT
                     LLLSIKAFNPIIVGKLDK"
     gene            complement(6024..6698)
                     /gene="modB"
                     /locus_tag="RJ318_000478"
     CDS             complement(6024..6698)
                     /gene="modB"
                     /locus_tag="RJ318_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDV7430375.1"
                     /translation="MLDPAFLQTLYLTFKLAFITTFILFFIGVFLAYLLSFVRFPFKT
                     ILQSFISLPLILPPSVLGFYLLVTFSANSFLGQVLKEYFNLSLVFSFEGLVFASLIFS
                     LPFMVNPLQSAFSSINPNLLDASYSLGKSKIYTLFRVILPNSKAGIFSACAMSFAHTV
                     GEFGVVMMIGGHKQGETLVASIAIYDELEILNYSLAHQYAFILFIFSFLVLFSLYFIN
                     KKMSFQ"
     gene            complement(6691..7092)
                     /locus_tag="RJ318_000479"
     CDS             complement(6691..7092)
                     /locus_tag="RJ318_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-pterin-binding protein"
                     /protein_id="HDV7430376.1"
                     /translation="MNLIKGQICELLNQEDIVIVKILSKEVIFSVLMLELKSLENLKI
                     GVSVELLFKEHELCFSASKTLLSVENSFLAKITKIKKGKLLYQVFFDFKGNELSSIIT
                     KEKALELEICENQEWLCFVKANDIVLRSHSA"
     gene            complement(7089..7838)
                     /gene="modA"
                     /locus_tag="RJ318_000480"
     CDS             complement(7089..7838)
                     /gene="modA"
                     /locus_tag="RJ318_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV7430377.1"
                     /translation="MKKFVVFFGILLFVSCLNAQNLSIFVASSASKAMSEVKDEFLKT
                     HPEDKIELVFGASGKYYELLKQGREFDLFFSADTKYAKAIYDDKNALIKPKVYVLGVL
                     ALYSLDENLLQGGVENLKEKANKITHLSIANPKVAPYGVAAKEVLENLGLNELLKDKI
                     VLGENISVPVLHVDSKNSDIAIVAYSLVSSINHPKGKAVIIDAKYFSPLEQSYVITKY
                     AKDKKLAFEFNEFIGSSKAKEIFKKYGFSTP"
     gene            complement(7889..8575)
                     /gene="bioC"
                     /locus_tag="RJ318_000481"
     CDS             complement(7889..8575)
                     /gene="bioC"
                     /locus_tag="RJ318_000481"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDV7430378.1"
                     /translation="MNFLKAKDYEKHAKVQDFMGLKLCEILKNLRISHFEKVFEFGCG
                     RGELSKKLQNFITFDEYLKNDILDFKENSSILIFDMNEIAKQDLSKEKFDLIVSNATL
                     QWLDLKRIIPSLRDMLNQNGILLLSTFAEQNLKEIKQSTGFGLNYFSLNELEQIFKVY
                     FNEVKITQELIKLSFDNALDVFRHLKLSGVNSLGFYPLNKGFLKEFEEKFQNKLTYHP
                     VFILCKNDIK"
     gene            complement(8572..9183)
                     /locus_tag="RJ318_000482"
     CDS             complement(8572..9183)
                     /locus_tag="RJ318_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDV7430379.1"
                     /translation="MKYEFLCKNPDSKKLIVVFGGFASHSSHFSHLKSDKNVILFYDY
                     ENFDLNFDFKAFDELFLIAFSMGVCVANRLLKELNFKQKIAINGTNLGIDKSKGIHPA
                     IFRKTLQNFKLENFKEALFKERKNLTKDFIFKDEKALKIELEKLFDFALVKQEENLLW
                     DKVYSSKKDEIFPPNALKNAFSKLIFLNEPHFAFFHFKTWDEL"
     gene            complement(9180..10322)
                     /locus_tag="RJ318_000483"
     CDS             complement(9180..10322)
                     /locus_tag="RJ318_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HDV7430380.1"
                     /translation="MKLEKILQDLEQNHNLRTLTPLKHENKFVYKQDHKLLNLVGNDY
                     LYLASSKELKAEFLNTLKEQDLFFSSSSSRSLSGNFEIYEKLESFLKTKFKDKEILHF
                     NSGYHLNISCIAALSSVSKTLFLTDKFIHASMIDGLRLGRADFFRFHHKDMNHLESLI
                     QKHYENYENIIVLSEALFSMDGDFSDFKTLCELKRRYDKIKLYIDEAHSVGCFDEEGL
                     GLVKKLALENEVDFLVFTFGKALASMGACIICDEKYKKFFINKARAFIYSTALPPINV
                     AWTQFIFKKMPYFKKEREKLELLSTFFKSKLQEKNHIVLGDAYIICLLLGENKKALEI
                     SQKLQKAGFFAPAIKEPTVPKNTARIRFSLHAGLNTEELERIIELL"
     gene            10390..11673
                     /locus_tag="RJ318_000484"
     CDS             10390..11673
                     /locus_tag="RJ318_000484"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDV7430381.1"
                     /translation="MQNQILKNLDLKHIWHPCTQMKDHETLPLIPIKKAKGVWLYDFD
                     DKAYMDCVSSWWVNLFGHCNEKIANAIKKQVDELEHVILAGFTHEPIIKLSARLCEKV
                     GRNFNKCFYADNGSSAIEVALKMSFHYHLNKGVKKSKFLSLSNSYHGETLGALSVGDV
                     ALYKDTYKALLLECLSTPVPQGKDYTKELEILKDILEKNASEICAFILEPLVQCAGNM
                     HMYEARFIDEAIKLCHKFGVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITG
                     GFMPLSVVLTRDEIYNAFYDTYESQKAFLHSHSYTGNTLACAAANAVLDIFEDENILV
                     KNQILSEFIKKEFSRLEKFDFLGNFRTCGMISAFDILSTKYKRVGLFVFQKALEKGLL
                     LRPLANTIYFMPPYIITKEQIVYVLESLEQIFKEF"
     gene            complement(11660..12265)
                     /locus_tag="RJ318_000485"
     CDS             complement(11660..12265)
                     /locus_tag="RJ318_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDV7430382.1"
                     /translation="MQIYVSGIHTDVGKTHFSAAFCANFNYDYFKLIQAGTPTDSEFI
                     AKFSPKTKIFKEGIFLQTPASPHLGKIKEKLDYKALDIILPKSKNLLIELAGGLFSPM
                     DENYTMIDFVNIFKHPTILVAKYYLGSINHILLSIEALKQRNINLLALVMMGKKDILQ
                     DDFIKNYAKIPIINLDFFDENSILNKDFKEQMQEILQLKIP"
     gene            complement(12275..12589)
                     /locus_tag="RJ318_000486"
     CDS             complement(12275..12589)
                     /locus_tag="RJ318_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7430383.1"
                     /translation="MEWFYLFLATACEIFGVVIMKELVSTKNKLYLLALIVCFGFSFT
                     FLSLSMQNIAMSVAYAIWTGAGTAGGVMIGVLFYKESKSFLKLFLIAVIITCTAGLKF
                     LS"
     gene            complement(12593..12931)
                     /locus_tag="RJ318_000487"
     CDS             complement(12593..12931)
                     /locus_tag="RJ318_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7430384.1"
                     /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWQYILTAIGV
                     CISFTCFLKACERLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSIIKLVLIAILLLSI
                     IALKWVSKEA"
     gene            13065..13601
                     /locus_tag="RJ318_000488"
     CDS             13065..13601
                     /locus_tag="RJ318_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDV7430385.1"
                     /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNE
                     FIKEVRKKTTLIFDVKVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPV
                     KITGTAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAG
                     VTMIDADRVAVVGVEKAR"
     gene            13598..14143
                     /locus_tag="RJ318_000489"
     CDS             13598..14143
                     /locus_tag="RJ318_000489"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDV7430386.1"
                     /translation="MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFK
                     GELFKIGSSLLLLKPSTYMNNSGLSVKAVNDFYKCERMIVIHDDIDINLGALRFKKGG
                     SSGGHNGLKSIDTLCGNDYERVRIGVGKGENVISHVLGKFKSEEEITLSKVLEHAKKA
                     LLELIENDDLSAISSKYSLKA"
     gene            14145..15203
                     /locus_tag="RJ318_000490"
     CDS             14145..15203
                     /locus_tag="RJ318_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDV7430387.1"
                     /translation="MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAAN
                     LDLLYVMFLSFSAVPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFL
                     WALFFCCIYIGLNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQ
                     NSAQNIKIFNINDLNLSSFASAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDF
                     SELKSLEGFKPKIIEGVASNSDYSISDALESFELFKAQNVNTDTLKINLYKFVFTPFF
                     APFLMLIMYYFFPVIARFFNLAFVTFIAFVVTLMIWGVLFLLTRLSENSVIASEIGIV
                     VPIIILGCLSAYMYYKHR"
     gene            15247..16455
                     /gene="lysA"
                     /locus_tag="RJ318_000491"
     CDS             15247..16455
                     /gene="lysA"
                     /locus_tag="RJ318_000491"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDV7430388.1"
                     /translation="MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAV
                     KANSNLSLLQMLANLDSGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEY
                     DILYINLESEAEMMLLESVAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEI
                     DIARKMYLYAKNSSFLEPVGVHFHIGSQLLDISPIHEAAAIVAKLVRELKALQIDLKF
                     FDIGGGLGVAYEKNECEPDLYDYAQGILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVL
                     YEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILPYNQGEESLCDVVGGICESGDFFA
                     KARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQ
                     IALEEKFLKA"
     gene            16457..17224
                     /locus_tag="RJ318_000492"
     CDS             16457..17224
                     /locus_tag="RJ318_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HDV7430389.1"
                     /translation="MFFLDVQGTLISDHDKSLIHGAKELIDFLNAKNLPYLIITNNTK
                     KLDFLEKLQQKGLVIKENAYIDPFSVLKHLLRPCKVAAFGADEFVKSLENLGFELDFV
                     NPSAVLVASYDDFKFKDFATMIELARREVRFIAMHETSIYKKDGRPYPGVGSIMAMLK
                     NAIDFEYEVVGKPSIAFYKEALNLIRRQNSKIDFEDIKIISDDFRGDLLKAKELGMKT
                     LLVLSGKISDTKGLDTDLLDGVYPSVFEFLKDLKCQI"
     gene            17212..18285
                     /gene="pheA"
                     /locus_tag="RJ318_000493"
     CDS             17212..18285
                     /gene="pheA"
                     /locus_tag="RJ318_000493"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HDV7430390.1"
                     /translation="MPNLEEFRNKIDAVDDKILDLLNERMTYVKSIGELKQSSGGSIY
                     RPERERAIINRLKNANLGLLDQNAIEAIYQEIFAVSRNLEMPQTIAYLGPEGTYTHQA
                     ARSRFGAMSRYIALANIEDVFKELSNKEAKYGVVPIENNTEGAVGITLDCLGKYNELK
                     IFGEIYMDIHHSFVGINENLKEIKRIYSHPQGYNQCRKFLESHELSAIEFVPSKSTAN
                     AAYLASQDKYAAAICSRIAAKLYNVPVLFDKIEDNAANKTRFLILSDIKNPKMPNCKT
                     SILAHTAHKPGGLSFLLEQFKKENINLTKLESRPVKSKEFLHSFYIDFEGHIDDENVK
                     KALKDIQEIVWLGSYLSGEKDEI"
     gene            18275..19369
                     /locus_tag="RJ318_000494"
     CDS             18275..19369
                     /locus_tag="RJ318_000494"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDV7430391.1"
                     /translation="MKFNEFLNNLSNYEPGKDIEVIAKEYGVKEVIKLASNENPFGTP
                     PKAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKL
                     NSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCL
                     PNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNV
                     LYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTE
                     KTLENNFSQMELYKEFAKKHNIKIIDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNL
                     KSYGLNAIRITIGTSYENEKFFTEFDKILR"
     gene            19421..21103
                     /gene="fliF"
                     /locus_tag="RJ318_000495"
     CDS             19421..21103
                     /gene="fliF"
                     /locus_tag="RJ318_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HDV7430392.1"
                     /translation="MDFKNMLHQIGQLYQNLTRKQRIVIAASIIVVVGFLVFLALFRG
                     SGSNANNGYAVLVENVSPSSSAAIVAKLEQNNIPYKLESENKILVPQDQVYRQRMFIA
                     SEGLIKDSRVGFEAFDTQAFGATNEEQKVKYQRAIEGELARTIETLEPIRSAVVHIAF
                     PKDSVFTERQIPPTASVVVNVREGLKLTRKQIDGIKNIVSAAVPKLTKENVKISDQSG
                     VPLDEQEAYEDDLVRAQIKFKSDQEKALEDKIIENLAPFAGGMDKVKVSVNIDFDFSK
                     QESQSEIYDPNPIVRSEQTLNEERTGRKDPEIQGVPGAVSNIGPVEGLDNKGQIDTYK
                     KNQVTTNNELSKTITNTKKQFATVLRTSAAVTIDGKYQDVVDENGDVKSEYVPLTKEE
                     LASVESIVKNTINFSATRGDSVVVQNLPFHRESIRVESKVKTFYNRFVEPFIPPVKYF
                     IAAILLFIFYKKVIAPFTQKMLEDVAAQEEMQQGPNAVLDDAEDALEKFNAARKKVEE
                     QLGFGDNFNEDSIQYEVLLEKLRGLVSDKGEEIAALLQNLIQNDSEFGEKDM"
     gene            21103..22131
                     /gene="fliG"
                     /locus_tag="RJ318_000496"
     CDS             21103..22131
                     /gene="fliG"
                     /locus_tag="RJ318_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HDV7430393.1"
                     /translation="MIKLSEEQKMVYDDLSMPEKVAIFLIQLGEDATTSVFSHMEIDV
                     ITEISRYIAMAKNVDRSVATAVLEEFYTLLQSNQYIKSGGLEYAKEILFRTFGPEIAN
                     KILEKLTKSMENNQNFAYLAQIKPQQLADFITKEHPQTIALILAHMDSIHAAETLEYF
                     SDELRAEVVIRMANLGDISPSIIKRVSAVLESKLESLTSYKVEVGGPRAVAEVLNRLG
                     QKASKSTITYIEQSDERLAETIKELMFTFDDIQKLSTQAIREILKVADKRDLMIGLKG
                     ASEELKQKFLANMSTRASEAFLEEMGFLGAVRVKDVEDAQRKVVEVVQKLAEQGLVQT
                     GDADEMIE"
     gene            22139..22969
                     /gene="fliH"
                     /locus_tag="RJ318_000497"
     CDS             22139..22969
                     /gene="fliH"
                     /locus_tag="RJ318_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HDV7430394.1"
                     /translation="MVNRSNVISGGASDQHVVEGYRFKVISEFDNHTGEKKHTQTPDE
                     ENTNISLNDEKPVEENQVIASTQAVVETQIPTFQPSFVEDLLKKTDEMSSNIIKLQMQ
                     IESQENEFNNRLNSELENAKEKFTKEGYEKAKEEFQKELSDFKDKYLKSIAKLDNACE
                     NLENFIEKNEKELADTAIDIAKEVILKELELNSSKIAYALAKDLIGELKGASAIELKV
                     NAEDYEYLKEQFDQNAHIKISLDDAISKGSVVIISDAGNIESNLNSRLTKIKKMVNNE
                     "
     gene            22962..>24794
                     /locus_tag="RJ318_000498"
     CDS             22962..>24794
                     /locus_tag="RJ318_000498"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDV7430395.1"
                     /translation="MSKKFAHTQEELEKLSLKELENLAASMREKIIQVVSKNGGHLSS
                     NLGAVELSIAMHLVFDAKKDPFIFDVSHQSYTHKLLSGKEEIFDTLRQINGLSGYTKP
                     SEGDYFVAGHSSTSISLAVGACKAIALKGEKRIPVALIGDGALSAGMAYEALNELGDS
                     KFPCVILLNDNEMSISKPIGAISKYLSQAMATQFYQSFKKRIAKMLDILPDSATYMAK
                     RFEESFKLITPGLLFEELGLEYIGPIDGHNLGEIISALKQAKAMQKPCVIHAQTIKGK
                     GYALAEGKHAKWHGVGAFDIDSGESVKKSDTKKSATEIFSKNLLDLASKYENIVGVTA
                     AMPSGTGLDKLIEKYPNRFWDVAIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQ
                     VIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDEQMMQNI
                     MEYAYLHQGPIALRYPRGSFILDKEFNPCEIKLGKAQWLVKNNSEIAFLGYGQGVAKA
                     WQVLRALQEMNNNANLIDLIFAKPLDEELLCELAKKSKIWFIFSENVKIGGIESLINN
                     FLQKYDLHVKVVSFEYEDKFIEHGKTSEVEKNLEKDVNSLLTKVL"
BASE COUNT         8812 a         3481 c         4158 g         8343 t
ORIGIN      
        1 atgaagcttt aaaaaaatat gttaaaatcc agatttttat cttttgcaag gaagacaatg
       61 aaagaaattc ttatcactaa tgacgatggt tatgaaagcg aaggacttaa aaaactcatt
      121 aagatgttaa caaaagaatt taaagccaag atcaccatag tagctcctgc tagtgaaaaa
      181 tcagcttgtt cgcactctat aaccctaacc aaacctttgc gttttgttaa agtgggaaaa
      241 agattttaca aacttgatga tggcactcca gcagattgtg tttatcttgc tttgcatgct
      301 ttatacaaaa agcgtttgcc tgatcttgta ataagtggga ttaataaagg tgctaatgta
      361 ggcgaggata ttacctactc aggaacttgc gcaggagcta tggaggcggt tttacaagga
      421 attcctgcta tcgctctttc tcaattttat aaaaaaagcg aaaaagaact agactataaa
      481 aatgctttac aaattaccaa aaaaatcatt caaaatattt ttgataaagg ttttcctttg
      541 gaaaaaaaag aatttttaaa tatcaatttt cctgcaaaat caaaaatcaa aggcattaaa
      601 atttgtaaag caggcaaaag ggtttataat tttgaagccc attcaaatgt caatccgaga
      661 ggagtagagt actattggct tgcagcggcg aatttagact ttgaagatga gaaaaatagc
      721 gatattgcct tacttaaaaa aggctacgct acaataacac ctataatgct ggatcttaca
      781 gcttatgaaa gaatgaaaaa agttaaaaaa tggttaaagg caaatgatga atgatagatt
      841 tacacgtata aaatggctag ttggagaaga aaaatttcaa aaaatttcac aaacaaaagt
      901 tttggtttgc ggacttggtg gagtgggtgg aatttgcgtt gatgcgcttt atcgtagtgg
      961 ttttaaaaac cttactttaa tcgatgcgga taaatttgaa atcactaatc aaaatcgcca
     1021 aattcatagc gaaaatatag gcgaagaaaa ggctaaagta tttgaaagaa tttataaggt
     1081 taaaggtata gtcagtaaaa tcgatgaaaa ttttttaaaa aattttgatt taagcgagtt
     1141 tgatcttatc atagatgcca ttgatgatat tcctgcaaaa gtagctttgg ctcatcttat
     1201 agattttaaa aaacaaattt ttatctcctc aacaggtgga gctagaaagc ttgatccaac
     1261 acgcattaaa actacaagta tttttaaaac tcacggcgat gctttagcga aaaaatttcg
     1321 ttatgagctt agaaaatcag gctttaaggg aaattttgat gtggtatttt cagatgagga
     1381 agcgcattgt aaagatcttg gatcttttat gggtgtgact gcatcttttg gtttagccct
     1441 agccagcttg gcattaagaa aagttcttgc taagaaaagc tgatattaaa gatttaaatg
     1501 cttgtttgtc gctttttgag caaagcgtaa aaacactttg tgcttggatt aaaattgata
     1561 gacaacaatg ggaagaaaaa tttaaatatg atgagatctt tgtctatgaa aaaagaggaa
     1621 aaatcgcaag ttttataagt gttaaacaag agcagaaatt gcttgatttg ctttttactc
     1681 atcctgattt tgttagacaa ggtttagcac aaaatttact tgattttatt ttaaaaactt
     1741 atttgcataa tgaaatttac actttcgcat ccttaagtgc taaagatttt ttcttaaaaa
     1801 atggttttga acttataagg gaaaacaagg ttatcaaaga gggacaaaat ttaaaaaaaa
     1861 ttttaatgaa aaaagatgtg atttataaaa actagaagtt aagataagca aaaataatgg
     1921 attaaaagat ataaaaatca tttttttcta tcttagataa atgaatttat ctaagataga
     1981 aaaaattaca aaaatagcta gatgttagaa aatagctccg tgtttttcat aatttgttat
     2041 ttttgtagca gtgttatttt catccacaaa aacaactttt ggtttaaatg tttttgcttc
     2101 ttcttcatta aaatcagcat aagacatgat gatcacctta tctcccactt ctgcaagacg
     2161 agccgcagca ccatttaagc atacaactcc ttcttcttgc gtggctatgg tataggtttc
     2221 aaatctagcg ccattattga cattgactac ttggactttt tcgtattcta aaattccact
     2281 cgcttgcaat aatttttcat ctatacttat acttcctata taatcaagcc tagcttctgt
     2341 tacgcttgcg cgatgtattt ttgatttgag taaagtgata ttcattttaa tccttgtact
     2401 aaaaaattat caatgagtct tgtttttcca acaaaagcag ccaccgctcc taaaacatta
     2461 tcagtgatat tttcgatatt ttccatggtg ttaaaatcga ctaattctat ataatcgatt
     2521 ttgattagtt tttctttttc taaaatatct ttcatagctt ggatgatctt agaagtattt
     2581 ttttctccct ctcggactaa tttttcagcc aaaaaaatgc tttgagatat agctagtgac
     2641 gcttttcttt cttctttgct aagatataca tttctagagc ttttagctaa gccatcttct
     2701 tctctaatga taggacaaat ttgaattttt aaatcaaaat ttaaatcatc aaccatatgc
     2761 ctaacgacta cgcattgctg cgcgtctttt tgccccatat agactatatc agggtttagg
     2821 atattaaaaa atttagttaa aaccgtgcaa acgcctctaa aatgccccgg tcttttagcc
     2881 ccgcaaagtt tatcagtgat cgtattcata tctacatagg tgctaaaatt cttaagatac
     2941 atttgagttg catcggggat aaaaaccata tcaacgccat tatcttgaca cattttaatg
     3001 tcgcgttcta aatctcttgg ataactagaa aaatcttcat taggcccaaa ttgcatagga
     3061 tttacaaaga tacttactat aaccttatct tgtgttttgg catgtttgac taaacttaaa
     3121 tgtccatcgt gtaaaaaacc catggttgga acatagccta tactaagttg atgtgatttc
     3181 caatctttta caatttgttt tgcttctttg acagaagtaa tgacttgcat atttgtatcc
     3241 ttagtataat ttatctaata attcatcatc taaataatca aagctgtgct cttgggaagg
     3301 aaaaataccg cttttaactt catctctata tttttcaact cctacttgag gatcaatttt
     3361 atcaaaatgc tttacaaatt ttgctttaaa atctttattt aaacccaaaa gatcgtgata
     3421 aactaaaact tgtccatcgc agtatttgcc tgaacctatg ccgattgttg gaatttctaa
     3481 aatagagctt attttttgtg ctagttttac aggcacacat tctaaaacca acatacaagc
     3541 acccgcatct tgcacagctt ttgcatcatc tataattttt tgggctgatt gtaaatcttt
     3601 accttgaacc ctatagccac ctagcatatt tacagcttgt ggggttagtc ctaggtgagc
     3661 aacgacgggt attcctgatt gggaaatcaa tttaatctta cttgcgattt ctataccccc
     3721 ttccactttt accccatttg cgtggctttc tttgataaat cttgaggcat ttaagatagc
     3781 gtcacgatct gaactttgat aagacataaa aggcatatca gcaagtacga aagacttttt
     3841 agctccgcga gaaacagctt tggtaaaaat caacatttca tccatagtaa cacttaaagt
     3901 atcttgcata ccaagtaccg tcatggctaa tgaatctcca accaatataa tatctatatc
     3961 gctattgtct aaaattcttg cactatgata atcatacgca cttaccatgg ttattttttc
     4021 atttttggcc tttttttcca aaaaactaat catacttttt ctcattttgc atacctcaat
     4081 ttttagctat aaaataataa gcaaaaaact agcatataat ttttcataaa tagtaaatga
     4141 atgataaagt aagttatatt taatcgatgg attgctttaa tggttacaat tttagaaaat
     4201 ttcagttcat gttaaaggat atttaaagaa aataaagctt taaaaagtat tttgtttaaa
     4261 attatttaaa tagaaagata ttttatgaaa aaaataactt tatttttact tttcttaaat
     4321 ttagtgtttg ggcaagataa gatattaaat aattggttta aagagtataa tacaagcggc
     4381 acttttgttt tttatgatgg aaaaacttgg gcgagtaacg acttttcaag ggctatggag
     4441 actttctctc ccgcttccac ttttaaaatt tttaatgctc taattgcact tgatagtggt
     4501 gtgataaaaa ctaaaaaaga aattttttat cactatagag gtgaaaaagt atttttatct
     4561 tcttgggcgc aagatatgaa tttaagttca gctataaaat attctaatgt tcttgctttt
     4621 aaagaagtgg caagaagaat tggtatcaaa actatgcaag aatatttaaa caagcttcat
     4681 tatggtaatg ctaaaatttc caagatcgat actttttggc ttgacaactc actaaaaata
     4741 agcgctaaag aacaagcaat tttgcttttt agactttcac aaaatagctt acctttttct
     4801 caagaagcaa tgaatagtgt taaggaaatg atttatttaa aaaatatgga aaatttagag
     4861 ctttttggaa aaacaggttt taatgatgag caaaaaattg cttggattgt aggttttgtg
     4921 tatttaaaag atgaaaataa atataaggct ttcgcgctaa atttagatat tgataaattt
     4981 gaagatttat ataaaagaga aaaaatttta gaaaaatatt tagatgaact tgtaaaaaaa
     5041 gttaaaaatg atggctagtg agtatttcgt aaaatgcaaa aatacttaat tgtatgattt
     5101 gcgtacactt aaagtactca ttaaaaaatt aaatttttgc tcttatttat caagttttcc
     5161 tacgatgata gggttaaagg cttttatgga tagcaaaagc gtatcgccga tttttacatc
     5221 ttgataagct tttagaaatt cctcttcact aagagtgatt ttaataatat cttgatttaa
     5281 aagcaaggtt aaaaccacta aaatatcact ttttttaatt tctagcaaag ttgcacttaa
     5341 gcgtaatttt gcgctgatat ttgaatgagt aaaaaattca tttttaggaa aatctttaat
     5401 aatttttccg tttttaagct ctaaaattct atgacttaac ttataaattt cagctagatc
     5461 atgacttacc aataaagtac ttattttaaa atactctaaa atcttggtta attcatcttg
     5521 taaattggca cgcattttaa aatccaaagc actcaaaggt tcatctaaaa gcaagatttt
     5581 tggttctctt gctaaagctc ttgctaaagc tactctttgt gcctgccccc cacttaaatg
     5641 tttaggataa attttagcta aattttcaag cttcattaag gctaaaagct cgctaacctt
     5701 tgctttagaa ctagcggcat aggcgatgtt ttcttttata ttcatatttg gaaaaagcgc
     5761 ataatcttga aaaacaaaac caatttttct tttttgtaaa gctaaactaa aattttttga
     5821 agaatcaaac caaagttcat tatctacttc tatacgcccc aatttaggct ttataagtcc
     5881 cgctatgatt tttaaaagag tggtttttcc tgctccactt tcgccaaaaa gtgcagtaat
     5941 ttttcctgat tctatatctt ttttaaaatt taaatccagt cttcctttag cggtattcat
     6001 aggatgattg atatcaattc ttatcattga aaactcattt ttttattgat aaaataaaga
     6061 ctaaaaagta ctaaaaaaga aaaaataaac aatataaaag catattgatg ggctaagcta
     6121 tagtttaaga tttcaagttc atcataaata gctatactag ccactaaagt ttcaccttgt
     6181 ttatgtcctc ctatcatcat cacgactcca aattcaccca cagtatgggc aaaactcatc
     6241 gcacaagcac taaaaattcc tgctttagaa ttaggtaaaa tcactctaaa aagagtataa
     6301 attttacttt tacctaaact ataagaagca tcgagcaaat ttggattgat cgatgaaaag
     6361 gcactttgca aaggatttac cataaaaggc aaagaaaaaa tcaaagaagc aaaaacaaga
     6421 ccttcaaaac taaaaaccaa agaaagatta aaatattctt ttaaaacttg ccctaaaaaa
     6481 ctattagccg aaaaagttac aagcaaataa aatcccaaaa cactaggagg taaaatcaaa
     6541 ggcaaggaaa taaagctttg aaggattgtt ttaaaaggaa aacgcacaaa acttaacaaa
     6601 taagctaaaa aaacaccgat aaaaaaaagg ataaaagtcg tgataaaagc aagtttaaaa
     6661 gtaagataaa gggtttgtaa aaaagctgga tcaagcacta tgactcctta atacaatatc
     6721 atttgctttt acaaaacaaa gccattcttg attttcacaa atttcaagtt ctaaagcttt
     6781 ttctttggtg ataatactag aaagttcatt acctttaaaa tcaaaaaata cctgatataa
     6841 aagtttgcct tttttaattt ttgtaatttt agctaaaaaa gaattttcaa cacttaaaag
     6901 agttttgctt gcgctaaaac aaagctcatg ctctttaaaa agaagttcta cactcacacc
     6961 aatttttaaa ttttctaaag attttaattc aagcattaaa acactaaaaa tcacttcttt
     7021 agaaagtatt ttaacaataa ctatatcctc ttgatttaaa agctcacaaa tttgtccttt
     7081 tataaggttc atggtgtgct aaatccgtat tttttaaaaa tttcttttgc ttttgaagag
     7141 ccaataaatt cgttaaattc aaaggctaat tttttatcct tagcgtattt tgtgatgaca
     7201 taactttgct ctaaagggct aaaatacttt gcatcaatta taacagcctt acccttagga
     7261 tgattgatag aagaaactaa agaataagcc actatagcta tatctgaatt tttgctatct
     7321 acatgtaaaa caggcactga gatattttcg cctaaaacga ttttatcctt aagaagctca
     7381 tttaaaccca aattttcaag cacttcttta gctgctactc cataaggagc tactttagga
     7441 ttggctatgc ttagatgcgt gattttgttt gccttttctt ttaaattttc aacgcctcct
     7501 tggagtaaat tttcatccaa gctatacaaa gccaaaactc ccaaaacata aacttttggt
     7561 tttattaaag catttttatc atcataaata gccttagcat atttagtatc cgctgaaaaa
     7621 aagagatcaa attctcttcc ttgttttaaa agctcataat attttccaga agcaccaaaa
     7681 accaattcta ttttatcttc tggatgtgtt ttcaaaaact catctttaac ttcactcatc
     7741 gcctttgaag ctgaagaagc tacaaaaata cttaaatttt gcgcatttaa acacgaaaca
     7801 aaaagcaaaa tcccaaaaaa tactacaaac tttttcattt agttttcctt gtgtaaaaat
     7861 ttaatttttg gattataaca caaaaaattc attttatatc atttttgcat aaaataaata
     7921 caggatgata agtgagtttg ttttgaaatt tttcttcaaa ttcttttaaa aaacctttat
     7981 ttaaaggata aaatcctaaa gaatttactc cgcttaattt taaatgtcta aaaacatcta
     8041 aagcattatc aaagcttaat tttatgagtt cttgagtaat ttttacttca ttaaaataga
     8101 ctttaaaaat ttgctctaat tcatttaagc taaaataatt taaaccaaaa cccgtgcttt
     8161 gcttgatttc ttttaaattt tgctctgcaa aagtagaaag aagtaaaatc ccattttgat
     8221 ttagcatatc tctaagactt ggtataatgc gttttaaatc aagccattgc aaagttgcat
     8281 ttgaaacaat aagatcaaat ttctctttac ttaaatcctg ttttgcaatt tcgttcatat
     8341 caaaaattaa aatactagaa ttttctttaa aatctaaaat atcgtttttt aaatactcat
     8401 caaaagtaat aaaattttga agttttttgc tcaattcacc cctgccacaa ccaaattcaa
     8461 atactttttc aaaatgtgaa attcttaaat tttttaaaat ttcacaaagt tttaaaccca
     8521 taaaatcttg cacttttgca tgtttttcat aatcttttgc ttttaaaaaa ttcaaagctc
     8581 atcccaagtt ttaaaatgaa aaaaagcaaa atgcggttca tttaaaaaaa taagttttga
     8641 aaaagcattt tttaaagcat ttggtggaaa aatttcatct tttttacttg aataaacctt
     8701 atcccaaagc aaattttctt cttgttttac taaagcaaag tcaaaaagtt tttcaagctc
     8761 tatttttaaa gctttttcat ctttaaaaat aaaatcttta gttaaatttt tgcgttcttt
     8821 aaataaagct tctttgaaat tttctaattt gaaattttgc aaggtttttc taaaaattgc
     8881 aggatgaatt ccttttgatt tatctatgcc taaatttgtg ccatttatgg ctattttttg
     8941 tttaaaatta agctctttta aaagtctatt tgccacacaa acccccatag aaaaagcgat
     9001 taaaaaaagt tcatcaaaag ctttgaaatc aaaatttaaa tcaaaatttt cataatcata
     9061 aaataaaatc acatttttat cgctttttaa atgcgaaaaa tgactagaat gtgaagcaaa
     9121 tcccccaaat accactataa gtttttttga atcaggattt ttacataaaa attcatattt
     9181 cataaaagct ctattatcct ttcaagttct tctgtgttaa gtcctgcgtg caaagaaaaa
     9241 cgaattctgg ctgtattttt tggcacggta ggttctttga tcgcaggagc aaaaaaacca
     9301 gctttttgaa gtttttgtga aatttctaag gcttttttat tttcacctaa aagcaagcaa
     9361 ataatataag catcgcctaa aacgatgtga tttttttctt gcaatttact tttaaaaaaa
     9421 gtgcttaaaa gctctaattt ttctctttct ttcttaaaat aaggcatttt tttaaaaata
     9481 aattgcgtcc aagctacatt aataggtggc aaggctgtag aataaataaa agctctagcc
     9541 ttgttgatga aaaatttctt atatttttca tcacatatta tacaagcacc catggaagca
     9601 agggcttttc caaaggtaaa aaccaaaaaa tccacttcat tttctaaggc tagtttttta
     9661 acaagcccca aaccctcttc atcaaaacaa cccacgctgt gtgcttcatc tatataaagc
     9721 ttaattttat cataacgcct tttaagctca cacagagttt taaaatcgct aaaatctcca
     9781 tccatactaa acaaagcttc gcttaaaacg atgatatttt cataattttc ataatgtttt
     9841 tggattaaac tctctaaatg attcatatct ttatgatgaa aacgaaaaaa atcagccctg
     9901 ccaagtctta agccatcaat catacttgca tgaataaatt tatcggttag aaaaagcgtc
     9961 ttagaaacgc tagaaagtgc tgctatacaa gagatattta gatgatagcc actattaaaa
    10021 tgtaaaattt ccttatcttt aaatttagtc tttaaaaaac tttctaattt ttcataaatt
    10081 tcaaaatttc cactcaaact tcttgaactc gaacttgaaa aaaacaaatc ttgttctttt
    10141 agggtgttta aaaactcagc ttttaactct ttggaagacg ccaaataaag ataatcattt
    10201 cctactaaat ttaaaagttt gtgatcttgc ttataaacaa atttattttc atgttttaaa
    10261 ggtgttagag ttcttagatt gtgattttgc tctagatctt gcaaaatttt ttcaagcttc
    10321 atttttttcc tgtaaattta aaaatttaaa gtattatttt gccaaaatat ttttaaaaaa
    10381 gaagttataa tgcaaaatca aatcttaaaa aatctcgatt taaaacacat ttggcaccct
    10441 tgcacacaaa tgaaagatca cgaaacccta cctttaattc ctataaaaaa agcaaaaggt
    10501 gtatggcttt atgattttga tgataaagct tatatggatt gtgtgagttc ttggtgggtc
    10561 aatctttttg gtcattgtaa tgaaaaaatc gcaaatgcca ttaaaaaaca agttgatgag
    10621 ctagagcatg tgatcttagc aggctttaca catgagccca ttatcaagct ttctgcaaga
    10681 ctttgcgaaa aagtaggcag gaattttaac aaatgttttt atgcagataa tggatcaagt
    10741 gctattgaag tagcacttaa aatgagtttt cattatcatt taaataaggg agtgaaaaaa
    10801 agtaaatttt tatctttaag caattcttat catggtgaaa ccttaggagc cttaagtgtg
    10861 ggcgatgtag cgctttataa agatacttac aaagccttgc ttttagagtg tttaagcacg
    10921 cctgtgccac aaggcaaaga ctacactaaa gagcttgaaa ttttaaaaga tattttagaa
    10981 aaaaatgcaa gtgaaatttg tgcttttata cttgaaccct tggtacaatg tgcaggaaat
    11041 atgcatatgt atgaagcaag gtttattgat gaggccataa agctttgcca taaatttgga
    11101 gtgcaagtga tttttgatga aattgcagtg ggctttggac gcacaggaac tttgtttgcc
    11161 ttacatcaat gcaaacaaag ccccgatttt atctgccttt caaaagggat aacgggtgga
    11221 tttatgccac tttctgtagt gcttacaaga gatgaaattt ataatgcttt ttatgatact
    11281 tatgaaagcc aaaaggcttt tttacattct catagctata cgggaaatac cttagcttgc
    11341 gcggcagcaa atgcggtttt agatatcttt gaggatgaaa atattttagt aaaaaatcaa
    11401 attttaagcg agtttatcaa aaaagaattt tcaagacttg aaaaatttga ctttttgggt
    11461 aattttagaa cttgcgggat gatcagtgct tttgatattt taagcaccaa gtataaacgc
    11521 gtaggacttt ttgtatttca aaaagcctta gaaaaaggtt tgcttttaag acctttagca
    11581 aatacgattt attttatgcc tccttacatc atcacaaaag aacaaatcgt ttatgtacta
    11641 gagagtttag agcagatttt taaggaattt taagttgtaa aatttcttgc atttgctctt
    11701 taaaatcttt atttaaaatg ctattttcat caaaaaaatc aagattgatt ataggaattt
    11761 ttgcataatt ttttataaaa tcatcttgta agatatcttt tttacccatc attacaaggg
    11821 ctaaaagatt gatatttctt tgctttaaag cttcaatgct aagcaagata tgattaatgc
    11881 ttccaagata gtattttgct accaaaatcg tagggtgttt gaaaatattc acaaaatcaa
    11941 tcatagtgta attttcatcc ataggagaaa aaagcccacc cgcaagctca ataagtaggt
    12001 ttttgctttt tggtaaaatg atatctaagg ctttataatc aagcttttct ttgatttttc
    12061 caagatgagg agaagctgga gtttgcaaaa aaataccttc tttaaaaatc tttgtttttg
    12121 ggctaaattt tgcaataaac tcactatctg ttggagttcc tgcttgaatg agtttaaaat
    12181 aatcatagtt aaaattcgca caaaaagctg cactaaaatg tgtttttcct acatcagtat
    12241 gtattccact tacataaatt tgcacaaaaa atcctcaaga aagaaatttt aaacccgctg
    12301 tacaagtaat aatcacagcg attaaaaaaa gtttcaaaaa acttttactt tctttataaa
    12361 aaagcactcc tatcattacc ccaccagcgg ttccagctcc tgtccatata gcataagcaa
    12421 cgctcatagc gatattttgc atacttaagc ttaaaaaagt aaaagaaaat ccaaaacaca
    12481 ctatcaaagc taaaaggtaa agcttgtttt tagtgcttac aagttctttc atgatcacca
    12541 cgccaaaaat ttcacaggca gtagctaaaa acaaataaaa ccattccata gtttaagctt
    12601 ccttgcttac ccatttaagg gctataatac ttaaaagtaa aattgctata agcacaagtt
    12661 taattataga aacagcttcg ttaaaaataa acatttcatt taaaaccacc ccaatagtgc
    12721 caatgcctac aaaaacacta taagtaatac ttacttcaag tctttcgcaa gcttttaaaa
    12781 agcaagtaaa agaaatacaa accccaatgg ctgttaaaat atactgccaa atttctgtag
    12841 aatatttaag tccacttacc caaaagcact ctataattcc acctaagatt attaaaaacc
    12901 aagctatatt aatattgaat ttttcattca catgaagcct taaattaaca taatatttgt
    12961 aaaacaaatt atatcttaaa gaaattaaaa gaagctataa atttactttt ccataagcca
    13021 aaattagata taatcaaagc tcatttttta agaaaggata aaagatgtta gaaggtatcg
    13081 ttagagagag tatcggtaga aaagctgcta aagctttaaa aagagatggt tatctaattg
    13141 caaacatcta tggaaaagga ttagaaaaca tcaatgccgc ttttaaagta aatgagttta
    13201 ttaaggaagt tcgtaaaaaa actactttaa tttttgatgt aaaagtaggt tctcaaactt
    13261 taagcgttgt agttgtggat tatcaaaaag atcctgtaac tgcagaactt aaacatgtgg
    13321 atttaaaagt tgcgcaaaaa ggtgtgattt ctaaatacat ggttccagtt aaaatcacag
    13381 gaacagctat aggtcttaaa aataaaggtg ttttaattca atcaaaaaga agattaaaag
    13441 taaaatgtgc agctgaaaat ttaccaaatt tcttcgaact tgatgtaagt aaacttgatg
    13501 tgggtgatgc tttacttgtt cgtgatattg tagttcctgc gggagtaact atgattgatg
    13561 ctgatagagt agcggttgta ggtgtagaaa aagctagatg attttagtcg tagggcttgg
    13621 caatataggc gtagagtatg aaaatacccg tcataatgtc ggttttatgc taattgactt
    13681 acttttaaaa gaaagcaatt ttacaaatct tacaaactct aaatttaaag gagagctttt
    13741 taaaataggt tcttctttac ttcttcttaa acctagtact tatatgaata attcaggact
    13801 tagcgtaaaa gcagtgaatg atttttataa atgcgaaaga atgatagtta tccatgatga
    13861 tatagatata aatttaggag ccttgcgctt taaaaaaggc ggttcaagtg gtggacataa
    13921 tgggcttaaa agcatagata ctttatgtgg aaatgactat gaaagagtgc gtataggagt
    13981 gggaaagggt gaaaatgtga tttcccatgt tttaggtaaa tttaaatccg aagaagaaat
    14041 aactttaagc aaagttttag agcatgcaaa aaaagctttg cttgagctta ttgaaaatga
    14101 tgatttgtct gctatatcat ccaaatacag cctaaaggct taagatgtgg atattttttc
    14161 gttttatttc agggatttat ttaaaaaatt tttttattat atttttttct ttacttggtt
    14221 tttattgcgg tattgatttg ctcttaaatt ttaaagatct accaaaagcc gcaaatcttg
    14281 atttgcttta tgttatgttt ttatcttttt cggcagtgcc ttatgtatta cccatttctt
    14341 tgatttttgc tttggtagtt tctttgattt ctatgatcag agcaaatgaa tttgtaagtc
    14401 tttatgcgtt aggactgagt agaaattatg ttattttatt tcctttttta tgggctttat
    14461 ttttttgttg tatttatata ggattgaatt ttacttcttt tgcttatgca aatgattata
    14521 agagaaatat tttgaaaaat ggcactatta tgaatcaaag tggagaagtg tttttgaaat
    14581 ttaacaataa ttttgtttat atttcaaaga taaacaatgg acaaaatagt gctcaaaata
    14641 taaaaatttt taatattaat gatttaaatt taagctcttt tgcaagtgct aaaaatgccc
    14701 attttgaagg tgaaagctgg attttgcgag atggtaatat tacattatta cctaaaaatt
    14761 atgaacttgc taatgatggt ttaaagatac aagatttctc cgagcttaaa tcacttgagg
    14821 gttttaaacc aaagattata gaaggggttg ctagtaatag tgattattca atatctgacg
    14881 cacttgaaag ttttgagctt tttaaggcgc aaaatgtcaa tacagatact cttaaaatca
    14941 atctttataa atttgttttt actccttttt ttgcaccatt tttaatgctt attatgtatt
    15001 atttttttcc tgtaatagca agatttttta atcttgcttt tgtaactttt atagcttttg
    15061 tagtgacttt gatgatttgg ggagtcttgt ttttgcttac tagattaagc gaaaatagtg
    15121 tgattgcaag tgaaattggc attgtagtgc ctattataat tttgggttgt ttaagtgctt
    15181 atatgtatta taagcatcga taaattaagc tttgtgtagt aaaattataa aaattaaagg
    15241 ttaaatatgg attataaaca attaaagcaa gaatttaata ctccttttta tatttacaat
    15301 tttgatttca taaaagagcg ttttttaaat ctcaaagagg cttttaaggc aagaaaatct
    15361 caaatttttt acgctgtaaa agccaattca aatttaagtt tgttgcaaat gcttgcaaat
    15421 ttagatagtg gatttgattg tgtaagtata ggcgaggtaa agcgtgcctt aaaagcagga
    15481 gcaaaagctt ataagattat ttttagtgga gtaggaaaaa ccaaagaaga gttaagacaa
    15541 gctttagaat atgatatttt atatattaac cttgaaagcg aagctgaaat gatgctttta
    15601 gaaagtgtgg ctaaagaact taatctaaag gcaagaatca gtattcgtgt taatccaaat
    15661 gttgatgcaa aaactcatcc ttatatttct acaggattaa atgaaaataa atttggtgtt
    15721 gaaattgata tagcaagaaa aatgtatctt tatgcaaaaa attcatcttt tttagagcct
    15781 gttggagtgc attttcatat aggttcgcaa cttttagata tttctcccat tcatgaagca
    15841 gcagccattg ttgcaaaact tgtaagagag ttaaaagcct tgcaaatcga tcttaaattt
    15901 tttgatatag gcggtggttt gggtgtggct tatgaaaaaa atgagtgcga acctgatctt
    15961 tatgattatg cacaaggtat attagcacaa cttcatgggc ttgatttaac tataggaatg
    16021 gagcctggaa ggtatctagt tgctaaaagt ggagaatttg tttgttcagt gctttatgaa
    16081 aaacaaaata aaaccaagcg ttttgttgta gtagatggag cgatgaatga tcttatacgc
    16141 ccaagtttat acgaggctta tcatgaaata atcttacctt ataatcaagg cgaagagagt
    16201 ttatgtgatg ttgtaggtgg aatttgtgag agtggggact tttttgctaa agcaaggtct
    16261 ttgcctagca ctcaaagtga tgatataatg gttattaaaa atactggagc ttatggtttt
    16321 agcatgagta gtaattacaa tactcgtaat aaagtttgcg aattagccct tgaagaagga
    16381 caggtaagat tgatccgtca aagagaaaat tttgaagatc aaatcgcttt agaagagaaa
    16441 tttttaaagg cttaaaatgt tttttttaga tgttcaaggg actttaattt ctgatcatga
    16501 taaatcttta atccatggtg ctaaagaact gatcgatttt ttaaatgcaa aaaatcttcc
    16561 ttatcttatc atcactaaca atacaaaaaa acttgatttt ttagaaaaat tacagcaaaa
    16621 aggattggtt ataaaagaaa atgcttatat tgatcctttc agcgttttaa aacacctttt
    16681 aagaccttgt aaagttgcgg cttttggtgc agatgagttt gtaaaaagtc ttgaaaatct
    16741 tggttttgag ctcgattttg taaatcctag tgctgtgctt gtggctagtt atgatgattt
    16801 taaatttaaa gattttgcca ctatgataga attggctaga agagaagtta gatttatagc
    16861 tatgcacgaa actagtattt ataaaaaaga tggtaggcct tatcctggtg taggtagcat
    16921 tatggctatg cttaaaaatg ctattgattt tgaatacgag gttgtgggta agcctagcat
    16981 tgctttttat aaagaagctt taaatttaat aagaagacaa aattcaaaaa ttgattttga
    17041 agatattaaa atcattagtg atgattttag gggtgacttg cttaaggcaa aagaacttgg
    17101 catgaaaacc ttgctagttt taagcggcaa gataagcgac acaaaagggc ttgatacgga
    17161 tttgcttgat ggagtttatc ctagtgtttt tgagttttta aaggatctaa aatgccaaat
    17221 ttagaagaat ttagaaataa aatcgatgcg gttgatgata aaattttaga tcttttaaat
    17281 gaaagaatga cttatgttaa aagtataggt gagcttaagc aaagtagtgg gggaagtatt
    17341 tatcgtcctg agcgtgaaag agccattatc aatcgtttaa aaaatgcaaa tttaggactt
    17401 ttagatcaaa atgccataga ggcaatttat caagaaattt ttgcagtttc aagaaattta
    17461 gaaatgcctc aaactatagc ttatttaggg cctgaaggaa cttatacaca tcaagcagca
    17521 agaagtcgtt ttggtgcgat gagtcgttat atagccttgg ctaatatcga agatgttttt
    17581 aaagagttaa gcaacaaaga agcaaaatat ggtgttgtac ctatagaaaa taataccgaa
    17641 ggtgcagtgg gcattacttt agattgtcta ggtaagtata atgagcttaa aatttttggc
    17701 gaaatttata tggatattca tcattctttt gtaggaatta atgaaaattt aaaagaaatc
    17761 aaacgcattt attcgcatcc gcaaggttat aatcaatgtc gtaaattttt agaaagtcat
    17821 gaacttagtg ctatagaatt tgttccttca aaatctacag ctaatgcagc ttacctagct
    17881 tcgcaagata aatatgcggc agcaatttgt tctagaatag cggctaagct ttataatgtg
    17941 cctgtacttt ttgataaaat agaagataat gcagccaata aaacaagatt tttaatttta
    18001 agcgatatta aaaatcctaa aatgccaaat tgtaaaactt ctattttagc acacacagca
    18061 cataaacctg ggggacttag ctttttatta gagcagttta aaaaagaaaa tatcaatctt
    18121 actaagcttg aatctcgccc tgtaaaatca aaagaatttt tacacagttt ttatatagat
    18181 tttgaagggc atattgatga tgaaaatgta aaaaaagcct taaaagatat acaagagatt
    18241 gtttggcttg gatcttattt atcaggagaa aaagatgaaa tttaatgaat ttttaaataa
    18301 tttaagcaat tatgaacccg gcaaagatat agaagttatt gctaaagaat atggcgttaa
    18361 agaagtgata aaattagcaa gcaatgaaaa tccttttggc acgccaccaa aagctataga
    18421 atgtttaaga caaaatgcaa acaaagccca tctttaccct gatgatagta tgatagaact
    18481 taaaagcaca ttggctcaaa aatacaaagt tcaaaatgaa aatatcatta tcggtgcagg
    18541 cagtgatcaa gtgattgaat ttgctataca ttctaagtta aattctaaaa atgctttttt
    18601 gcaagctgga gttacttttg ctatgtatga aatttatgcc aaacaatgtg gtgcaaagtg
    18661 ttataaaact caaagtatta ctcataattt agatgagttt aaaaaacttt atgaaacgca
    18721 caaagatgaa attaaactta tttttttatg cttaccaaac aatcctttag gcgagtgttt
    18781 ggatgcaagt gaggcgaccg agtttattaa aggtgtaaat gaggattgtt tagttgtgat
    18841 tgatgcagct tataatgaat ttgcaagttt taaagatagc aaaaaacatt tagaaccttg
    18901 tgaattgatt aaagaatttg acaatgtgct ttatttggga actttttcta aactttatgg
    18961 attaggaggc ttacgcattg gttatggcat agctaatgct aatattatta gtgcatttta
    19021 caagcttcgt gctcctttta atgtgagcaa tcttgcttta aaagcagcag ttgcagcaat
    19081 ggatgatgat gaatttactg aaaaaacttt agagaataat ttttctcaaa tggagcttta
    19141 taaagaattt gctaaaaaac ataatatcaa aattatcgat agttatacaa atttcatcac
    19201 ttattttttt gatgaaaaaa atagtacaga tttgtctgaa aaattgctta aaaagggtat
    19261 aataataaga aatttaaaaa gctatggttt aaatgctata cgcattacta taggaacatc
    19321 ttatgaaaat gaaaaatttt ttacagaatt tgataagatt ttaagataga taaatcaaat
    19381 aaaaatatgt aaaattcgct aaactaaggg atgagaatta atggatttta aaaatatgct
    19441 tcatcaaatt gggcaacttt atcaaaattt aactcgcaag cagcgtatag tgattgctgc
    19501 atctattata gttgtggttg ggtttttggt ttttttagct ttatttcgtg gaagtggtag
    19561 taatgcaaat aatggatatg cagttttagt tgaaaatgta agcccaagtt cttctgctgc
    19621 aattgtagct aaacttgaac aaaataatat tccctataaa ttagaaagtg aaaataaaat
    19681 tttagttcca caagatcagg tttatcgtca aagaatgttt attgcaagcg aaggtcttat
    19741 aaaagatagt cgcgtgggtt ttgaagcttt tgatactcaa gcttttggag ctacaaatga
    19801 agagcaaaag gtaaaatacc aaagagccat agaaggcgaa cttgcaagaa ctattgagac
    19861 tttagaacct attcgtagcg ctgttgtaca catagcattt cctaaagata gtgtttttac
    19921 tgaaaggcaa attccgccta cagcttcagt tgttgttaat gttcgcgaag gcttaaagct
    19981 taccagaaaa caaattgatg gtataaaaaa tattgtttca gcggcagttc caaaacttac
    20041 taaagaaaat gttaagatta gtgatcaaag tggtgtgcct ttagatgagc aagaagcata
    20101 tgaagatgac ttggttcgtg cgcaaattaa atttaaaagt gatcaagaaa aagctttaga
    20161 agataagatt atagaaaatt tagctccttt tgcaggtggc atggataaag taaaagtgag
    20221 tgtaaatata gattttgatt tttccaagca agaatctcaa agtgaaattt atgatccaaa
    20281 tcctatagta cgtagtgagc aaactttaaa cgaggaaaga acaggtagaa aagatccaga
    20341 aattcagggt gttccaggtg ctgtttctaa tataggtcct gttgaaggac ttgacaataa
    20401 gggtcaaatt gacacttata aaaaaaatca agttactaca aataatgaac tttctaaaac
    20461 tatcacaaat accaaaaaac aatttgcaac agttttacgc acttcagcag ctgttactat
    20521 agatggaaaa tatcaagatg tggttgatga aaatggggat gtgaaaagcg aatatgtccc
    20581 attgactaaa gaagagcttg caagtgttga gagtatagtt aaaaatacta ttaattttag
    20641 tgctactaga ggtgatagtg ttgtggtgca aaatttacca tttcatcgtg agtcgattag
    20701 agttgagagt aaagttaaaa ctttttacaa tcgttttgtt gaaccattta ttccgccggt
    20761 taaatacttt attgcagcga ttttactttt tattttttac aaaaaagtta ttgctccatt
    20821 tactcaaaaa atgcttgaag atgtcgcagc acaagaggaa atgcagcaag gtccaaatgc
    20881 tgttttagat gatgctgaag atgctttaga gaaatttaat gcagcaagga aaaaagttga
    20941 agaacaactt ggttttgggg ataacttcaa tgaagattct atccagtatg aggttttgct
    21001 tgaaaaattg cgtggtttgg taagtgataa aggtgaggaa attgcagcac ttttgcaaaa
    21061 cttaattcaa aatgatagcg aatttggcga aaaggatatg tgatgataaa gctaagtgaa
    21121 gaacaaaaaa tggtctatga tgatttatcg atgcctgaga aggtagcgat atttcttata
    21181 caacttggcg aagatgcaac cacttctgtg ttttcacata tggaaattga tgtaatcaca
    21241 gaaatttcac gttatattgc tatggctaaa aatgttgata gatctgtagc tactgcagtt
    21301 ttagaagaat tttacactct gcttcaatca aatcaatata ttaaaagtgg tggtttggaa
    21361 tatgctaaag aaatactttt tcgtactttt ggaccagaga ttgcaaataa aattcttgaa
    21421 aaactcacta aaagtatgga gaataatcaa aattttgctt atttggcgca aattaaacca
    21481 cagcaacttg cagactttat taccaaagag cacccacaaa ccatcgctct tattttggca
    21541 cacatggatt ctattcatgc ggcagaaact ttagagtatt ttagcgatga attaagggct
    21601 gaggtggtta taagaatggc aaatcttggt gatatttctc caagtattat taaaagagtt
    21661 tctgcagtgc tagaaagcaa gcttgaaagt cttacctctt ataaggttga agtgggcggc
    21721 ccaagagcag tagcagaagt gcttaatcgt ttgggtcaaa aagcaagcaa atcaaccatt
    21781 acttatattg aacaaagtga tgaacgctta gcagagacta ttaaagagct tatgtttact
    21841 ttcgatgata tacaaaaact tagcactcag gctataagag aaattttaaa agtagccgat
    21901 aagcgtgatt taatgatagg tttaaaaggt gcaagtgaag agttaaagca aaaattctta
    21961 gccaatatgt ctacgcgtgc aagcgaagct tttcttgaag aaatgggttt tttgggtgct
    22021 gtgcgtgtta aagatgttga agatgcacaa agaaaggttg ttgaagtggt gcaaaaactt
    22081 gcagaacaag gtcttgttca aacaggcgat gcggatgaaa tgatagagta ggtgagagat
    22141 ggttaatcgt agcaatgtaa tttctggtgg ggcttctgat cagcatgttg ttgaaggata
    22201 tcgttttaaa gttatttcag aatttgataa tcatacaggt gaaaaaaaac atactcaaac
    22261 tccagatgaa gaaaatacta atatatcttt aaatgacgaa aaaccagtcg aagaaaatca
    22321 agtcattgcc tctacacaag ctgttgtgga aactcaaatt ccaacatttc aaccaagctt
    22381 tgttgaagat ttacttaaaa aaacagatga aatgtcaagc aatattatta aacttcaaat
    22441 gcaaatagaa agccaagaga atgaatttaa taaccgctta aattcagaac ttgaaaatgc
    22501 taaagaaaaa tttaccaaag agggttatga gaaagcaaaa gaagaatttc aaaaggaatt
    22561 gagtgatttt aaagataagt atttaaaaag tatagccaaa cttgataatg cttgcgaaaa
    22621 tcttgaaaat ttcatagaaa aaaatgagaa agaattagca gatactgcta tagatatcgc
    22681 taaagaagta atcttaaaag aacttgaact aaattcaagt aagatagctt atgctttggc
    22741 taaagattta atcggtgagc ttaagggtgc tagtgcaatt gagcttaagg ttaatgcaga
    22801 ggattatgag tatttaaaag agcaatttga tcagaatgct catattaaaa taagtcttga
    22861 tgatgcaatt agcaaaggaa gtgttgttat tataagtgac gcaggcaata tagaatccaa
    22921 tcttaactct cgtctaacta aaattaaaaa aatggtgaat aatgagtaaa aaatttgccc
    22981 atactcaaga agagttagaa aagctaagtt taaaagaatt agaaaattta gcagcatcta
    23041 tgcgtgaaaa aatcatacaa gttgtgagta aaaatggtgg gcatttaagt tcaaatttgg
    23101 gtgctgtaga acttagtata gcaatgcatt tggtttttga tgcaaaaaaa gatcctttta
    23161 tttttgatgt gtcgcatcag tcttatacac acaagctttt aagcggaaaa gaagaaatat
    23221 ttgatacttt aagacaaatc aatggtttaa gtggttatac aaaacctagc gagggagatt
    23281 attttgtagc agggcattct agtacctcta tttctttggc agtaggtgct tgtaaggcta
    23341 ttgctttaaa gggtgaaaag cgtattcctg ttgctttgat tggagatggt gctttaagtg
    23401 cgggtatggc ctatgaggct ttaaatgaat tgggtgattc taaatttcct tgcgtaatac
    23461 ttttaaatga taatgaaatg agtatttcaa aaccaattgg agcaatttca aagtatcttt
    23521 ctcaggctat ggcaacgcag ttttatcaaa gttttaaaaa gcgtattgct aaaatgttgg
    23581 atatattgcc tgatagtgct acttatatgg ccaagcgttt tgaagagagt tttaaactta
    23641 ttacccctgg gcttttgttt gaagaattag ggcttgaata tatagggcct attgatggac
    23701 ataatttagg tgaaattatt tctgcattaa aacaagcaaa agctatgcaa aagccttgtg
    23761 tgatacatgc tcaaaccata aagggtaaag gctatgcttt agctgaagga aaacatgcta
    23821 aatggcacgg ggtgggagcc tttgatatag atagtggaga gagtgttaaa aaaagtgata
    23881 ctaaaaaatc tgctactgaa attttttcta agaatttgct tgatttagcc tcaaaatatg
    23941 aaaatattgt tggggttacg gcggctatgc caagtggaac aggtcttgat aagcttatag
    24001 aaaaatatcc aaatcgtttt tgggatgtgg ctattgcaga acagcatgca gtaacttcta
    24061 tggccgctat ggcaaaagaa ggatttaaac cttttattgc aatatatagc acctttttgc
    24121 agcgtgctta tgatcaagtg atccatgatt gtgcgattat gaatttaaat gtggtttttg
    24181 ctatggatag ggcagggata gtaggcgaag atggggagac gcatcaaggt gtttttgatc
    24241 ttagtttttt agctcctttg ccaaatttca ctcttttagc cccaagagat gaacaaatga
    24301 tgcaaaatat aatggagtat gcttatttac atcaaggacc tattgctttg cgttatccta
    24361 gagggagttt tattttggat aaagaattta atccttgtga gataaaactt ggtaaggcac
    24421 aatggcttgt aaaaaataat agtgaaattg cttttttagg ttatggacaa ggtgtggcaa
    24481 aagcgtggca agtcttaaga gccttgcaag aaatgaataa taatgctaat ttgattgatt
    24541 taatttttgc taaaccttta gatgaagagc ttttgtgtga gcttgctaaa aaaagtaaaa
    24601 tttggtttat ttttagtgaa aatgttaaaa ttggcggtat agaaagttta attaataatt
    24661 ttttacaaaa atatgatttg catgtaaaag ttgttagctt tgaatatgaa gacaaattta
    24721 ttgaacatgg aaaaacaagt gaggtggaaa aaaatctaga aaaagatgtc aatagtttgt
    24781 tgacgaaagt ttta
//
LOCUS       DAPIYB010000016        23229 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.016, whole genome shotgun sequence.
ACCESSION   DAPIYB010000016 DAPIYB010000000
VERSION     DAPIYB010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23229)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23229)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23229
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.016"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..224
                     /locus_tag="RJ318_000499"
     CDS             <1..224
                     /locus_tag="RJ318_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HDV7430396.1"
                     /translation="TLNELKDGQKVIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSSL
                     KNATIMVELDTSCVILRSDEAKTIEVNLI"
     gene            221..2062
                     /gene="feoB"
                     /locus_tag="RJ318_000500"
     CDS             221..2062
                     /gene="feoB"
                     /locus_tag="RJ318_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HDV7430397.1"
                     /translation="MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAK
                     TFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSA
                     ELLSLNKKMLLALNMCDEAKKEGIELDTSILSQEFQSQVVEISAKTKENLELLLQKII
                     ILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIH
                     KFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNTLGEFVKNNISNTFIASALADGI
                     IAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGF
                     GCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGI
                     YILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWHLVWFMVYNKAKMYLKKAG
                     TFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKGIEPIFQPLELDWKL
                     SVSLISGLAAKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIY
                     NPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLHIAKILLN"
     gene            complement(2059..3552)
                     /locus_tag="RJ318_000501"
     CDS             complement(2059..3552)
                     /locus_tag="RJ318_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
                     /protein_id="HDV7430398.1"
                     /translation="MAKLSNEELKNILEDRIKKLENSTLKEDKVINEESVKILARHLS
                     LGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHE
                     TLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKA
                     KAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIAGCPPSDINIIATLSFFAL
                     FGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKIGCKG
                     PYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEE
                     LKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYTFIEQ
                     NFDENPMPSKDFWKYLEISFILVKGEFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAE
                     KPKLDVSKSFRMTLIYLCGGLDFEGIAYSILKTFGDNITKISSLKAS"
     gene            complement(3556..4380)
                     /gene="fabI"
                     /locus_tag="RJ318_000502"
     CDS             complement(3556..4380)
                     /gene="fabI"
                     /locus_tag="RJ318_000502"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HDV7430399.1"
                     /translation="MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALK
                     KRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENS
                     FLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVA
                     KAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNV
                     SIEDVGNSAMYLLSDLANGVTGEIHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG"
     gene            complement(4384..5055)
                     /locus_tag="RJ318_000503"
     CDS             complement(4384..5055)
                     /locus_tag="RJ318_000503"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDV7430400.1"
                     /translation="MIFAANLKCNHTRASFKIYAKILNKTMGVKCDDIIVFPPSIAFL
                     ENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKF
                     DFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEIIDLNYEKLIIAYEPIYSIGTGV
                     SAQSTDIAKVLEFLASLTKVPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFI
                     KLIKG"
     gene            complement(5052..6254)
                     /locus_tag="RJ318_000504"
     CDS             complement(5052..6254)
                     /locus_tag="RJ318_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDV7430401.1"
                     /translation="MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIP
                     TIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIVMAKDVIGEDAKT
                     KAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAI
                     TKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDK
                     LIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPAC
                     SQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKG
                     SIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVK
                     ALRSKENE"
     gene            complement(6257..7255)
                     /gene="gap"
                     /locus_tag="RJ318_000505"
     CDS             complement(6257..7255)
                     /gene="gap"
                     /locus_tag="RJ318_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDV7430402.1"
                     /translation="MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYL
                     FKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLT
                     MAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCR
                     VLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVM
                     PELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAAATNLKGILMVDDD
                     ERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA"
     gene            7315..7860
                     /gene="nadD"
                     /locus_tag="RJ318_000506"
     CDS             7315..7860
                     /gene="nadD"
                     /locus_tag="RJ318_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HDV7430403.1"
                     /translation="MKIALFGGSFDPPHNGHNSVILEALEKLDIDKLIIMPTYINPFK
                     QNFSADEKQRFLWVKKLWGHFPKVEICDFETKQKRPVPSIESVKYLYKLYNPSKFYLL
                     IGADHLEKLHLWHDFEKLNSLVEFVIANRNDIEIPKNFKDLKTDKKIASSFIRNTLNT
                     NEVCEEIKDEVKKYYEKLQKN"
     gene            7888..8214
                     /gene="rsfS"
                     /locus_tag="RJ318_000507"
     CDS             7888..8214
                     /gene="rsfS"
                     /locus_tag="RJ318_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDV7430404.1"
                     /translation="MQERIDLIVKILDEKKAEDIKTIDMSEQEYFVKYVIIAATLGER
                     HALSLIDELKTQLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLEN
                     LKKGRV"
     gene            complement(8245..8622)
                     /locus_tag="RJ318_000508"
     CDS             complement(8245..8622)
                     /locus_tag="RJ318_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002870609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 family protein"
                     /protein_id="HDV7430405.1"
                     /translation="MKKILVLLLLCAFAFGASECDRKIDRINKEISFSKAHNDTARTL
                     SLELALKQVQNDCAKDPMFYDKKLEAKKLKEQEVEKIEKELDALKEQKDYMSKAEYKA
                     KKEALKEQKEKIKKEIKEYIDNL"
     gene            complement(8670..10040)
                     /gene="pgmL"
                     /locus_tag="RJ318_000509"
     CDS             complement(8670..10040)
                     /gene="pgmL"
                     /locus_tag="RJ318_000509"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase PgmL"
                     /protein_id="HDV7430406.1"
                     /translation="MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVS
                     VGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSH
                     NPKDYNGFKITINKESFFGVELKEFSKEVYKHLDDDIEENLEVEKYDILSLYVKFMCE
                     QFSFLKDFNYKFGVDCTNGAAGVVIKPLIKALNLKAHVMFAKPDGQFPNHAPDPTEEE
                     NLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTYVFCGDELCYLFAKNIPNPRILGE
                     VKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDG
                     IYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIPVNEEEKFKLVEEFQKEIEKGAL
                     KGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESTVFSLFNEI
                     KARLKN"
     gene            10162..10698
                     /gene="fliL"
                     /locus_tag="RJ318_000510"
     CDS             10162..10698
                     /gene="fliL"
                     /locus_tag="RJ318_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HDV7430407.1"
                     /translation="MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSS
                     SSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVK
                     CTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINE
                     ILTDGFIKNVYFTDFVVS"
     gene            10698..11045
                     /locus_tag="RJ318_000511"
     CDS             10698..11045
                     /locus_tag="RJ318_000511"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HDV7430408.1"
                     /translation="MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLA
                     GLWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSIS
                     HDNGFAIAIVAIV"
     gene            complement(11046..11465)
                     /locus_tag="RJ318_000512"
     CDS             complement(11046..11465)
                     /locus_tag="RJ318_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430409.1"
                     /translation="MKRVRTKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLG
                     YLFIVIIGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVI
                     KITDFFQKDHCKRANKREQPVVDFIISRNLDKQTIGK"
     gene            complement(11462..12823)
                     /locus_tag="RJ318_000513"
     CDS             complement(11462..12823)
                     /locus_tag="RJ318_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HDV7430410.1"
                     /translation="MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYV
                     KMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRE
                     LLRPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAIIEVDEAMTFITADVIFRTIMS
                     SKLDEEKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDRKRAKAGDVIRQVLS
                     DIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSL
                     TWTLYLLSLYPKEQEKAYEEITQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFF
                     AREAKKDTQVRDKLIKKDSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPF
                     GVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSK
                     REL"
     gene            complement(12820..13941)
                     /locus_tag="RJ318_000514"
     CDS             complement(12820..13941)
                     /locus_tag="RJ318_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF829 domain-containing protein"
                     /protein_id="HDV7430411.1"
                     /translation="MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHAFNIKADLSKIE
                     KNEQFPFFQISCEGVQTKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIK
                     FGKESIYQLITGYYPFFYVLFSLLFSLVLAFGSFAFLQNYMHFSLAIIIGCFLGFLLN
                     HFLFKLGKKLAVFWIARICAFCATWQDKKTGTMQERIKLFANTIVDKLKQNENKQDYE
                     LVLVAHSVGTIVCIEVLECILRQNLDLSLLHKLKILTLGECIPLVSYQKKADEFRKKL
                     EFVSRFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKI
                     KRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI"
     gene            complement(14014..15198)
                     /gene="kpsS"
                     /locus_tag="RJ318_000515"
     CDS             complement(14014..15198)
                     /gene="kpsS"
                     /locus_tag="RJ318_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide modification protein
                     KpsS"
                     /protein_id="HDV7430412.1"
                     /translation="MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKL
                     NFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKIDAILMYNDCRIIHAKAIKVAKE
                     LGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
                     MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIY
                     NLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRG
                     YKNYFKLINDLSRKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTK
                     VCGNAFYNFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFL
                     DK"
     gene            complement(15195..17264)
                     /locus_tag="RJ318_000516"
     CDS             complement(15195..17264)
                     /locus_tag="RJ318_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HDV7430413.1"
                     /translation="MKYYSISKKLIANVRNFYTISLYKKNLKIKKDDLFFGWGRKKSG
                     LKAMNLAKKYKAKFILLEDGFIRSLNLGVENSPSFSMVKDDIGIYYDATMPSKLENLL
                     NTCEFKDEEIKQAKKAIELIKKYKISKYNNNLDIPDNYFQKDEKRVLIITQTANDASL
                     EFGLAKDFKTLDMIKDAIKENPKSTIYIKIHPDVLSGKKQSDLDLNSLPKECILITEN
                     FNPIALLEFFDKVYTKTSGMGFEALMQECECICYGMPFYAGWGLTKDKLECKRRMQKR
                     SLEEVFYAAYILYAEYFNPYLNQKSNIFDTIQTLAKYKDIEKVNSNKLFMLGFTLWKR
                     HFIKPFFKAKDNEIIFLNSLKSLARYKLKENDKFFIWGKRIDYNALKTTLIKKAQDEN
                     LLHFTPKISLVEDGFIRSISLGSDLTRPFSLIVDDKGLYIDPNKASKLEELLQNEIFD
                     ENMLNRAKNIIKILLENRFSKYNGLKHEDLKINAKIGQKIILIPAQVEDDASMILGGF
                     GLSTLDLLKEVRAKNQDAYIIFKPHPDVLSGNRVGLKDETLILEFCDEIVKDCSIDSA
                     IKIADEIHTITSTSGFDALLRAKKVFTYGMPFYAGWGLTKDKYRCERRIRKLSLEELV
                     AGVLIIYPRYINPKTKTLCEIEVCLDIMLNLQKAYFSKKYIKLAIDFKTFMLRKIRRF
                     YEFLAKK"
     gene            complement(17261..17773)
                     /locus_tag="RJ318_000517"
     CDS             complement(17261..17773)
                     /locus_tag="RJ318_000517"
                     /EC_number="2.7.1.224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine diphosphoramidate kinase"
                     /protein_id="HDV7430414.1"
                     /translation="MKNNPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYLDGDEL
                     REILGHYAYDRQGRIDMALKRAKFAKFLNDQGMMVIVTTISMFNEIYDYNRKQLKNYY
                     EIYIECDMHELIQRDQKGLYTKALNKEIDNVVGVDIEFDKPEADLVINNSCRNNLEEK
                     VELIIKKLAL"
     gene            complement(17763..18524)
                     /locus_tag="RJ318_000518"
     CDS             complement(17763..18524)
                     /locus_tag="RJ318_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP:phosphoglutamine cytidylyltransferase"
                     /protein_id="HDV7430415.1"
                     /translation="MNAIILAAGFGSRLMPLTKDQPKCMVEYKNKKIIDYEIEALKSA
                     GINEIAVVGGYLNDVLKNYLNKYDIEHFFINSKYDKTNMVHTFFCAKDFMLKCIEEKQ
                     DLIISYADIVYFQDCVQKLINAKEELAIVVDKSWCKLWSKRFANPLEDAETLKMTNGY
                     IIELGKKANAYDEIEAQYIGLFKFSYQFLSEVIAFYEMLDRDILYDNKNFENMYMTSF
                     LQALIEKYNNAKAVEIDGNWCEIDFMSDLEVQIEK"
     gene            complement(18526..19128)
                     /locus_tag="RJ318_000519"
     CDS             complement(18526..19128)
                     /locus_tag="RJ318_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HDV7430416.1"
                     /translation="MFIGITQRLICNDSYHEKRECLALDWGKLFNKDLFKNFTPLPLS
                     YEIDFSYYKHLIKAVILSGGNDLSFYSPNVLSKKRDLYEKQVIEICLEEKIPLLGICR
                     GAQMIAHYFNSHISPCENHIGKHEVFFSKEKFISNSFHNFAIEKLGEDLVELCLAKDN
                     TIEAFKHKYENIFGIMWHIERENGLNNIQILKEWFSLIKE"
     gene            complement(19119..21458)
                     /locus_tag="RJ318_000520"
     CDS             complement(19119..21458)
                     /locus_tag="RJ318_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430417.1"
                     /translation="MAELKFKTKAQNLKNLQTKLKKAKVLPLVLTSLEELISNEDKVL
                     QDIQTLKANRLIIRSSSLSEDSMKNSNAGAFLSLANIKADSKDELLKALYEVANSMPS
                     KSDEILVQPMLENITLCGVGFSVDKDNFSPYFCLQYDENGSNSSITDGSSKSAKTYYH
                     YRNYLEFKDIRLQKIIELIKELEVLYDCHFLDVEFAFAIQDDKEELFCLQVRPLVMHE
                     KNNLFHSLPKEALYRFYKRFESLKESRSRVLGDKAIFGVMPDWNPAEIIGLRPKRLAF
                     SLYKEIITDNIWAYQRDNYGYRDLRSHPLIHSFLGIPYVDVRLSFNSFIPKKLDENIA
                     QKLVNFYLDKLNKNHELHDKIEFNIVYSCYDFNSSKKLEELLNHGFNENEIKRLEFSL
                     LELTNKIINPRSGFYLKDIQKAYKLKERYDGIINSNFSLIDKIYWLIEECKRYGTLPF
                     AGVARAAFVAMQLLNSLVEIDFITKEEKDDFLNSLNTVSKNLSKQTNHLNFHNKDQFL
                     KDFGHLRAGTYNILSPRYDEDFELYFDADQKDSKVYLQDKAFVFSEEKTRALNALLKE
                     HGLEINACEFFDFLKQAIEGRELVKFEFTRLLSKAIVYIEELGKYYDIEKEDLAHLDI
                     KSILNLYSSLYSINPKEQFIEEINRNKKEYELTQAIKLPSLLCNADEIFSFYNHSIIP
                     NFITQKSITAFTAKENDKDLEGKIVLIYAADPGYDYLFTKNIAGLITCYGGANSHMAI
                     RASELGMPAVIGVGEENFEKYLKAKKINIECESEQIFCL"
     gene            complement(21473..22234)
                     /locus_tag="RJ318_000521"
     CDS             complement(21473..22234)
                     /locus_tag="RJ318_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDV7430418.1"
                     /translation="MQKLVEQVWDYTKHAKFYSYRPNYAPKTIDMLISLVGKKDIKVA
                     DIGAGTGNLSIMLLERGCKVVSVEPNDAMREIGIERTKDQKIDWVRATGLNSTLQNSE
                     FDWVTFGSSFNVMDRNEALEEAHRLLKSEGYFSCMWNHRDLNDPVQKIAEDTIVEFVP
                     NYTRGTRREDQRPIIESRKDLFDNIVYIEEDFYFHQSIENYINAWKSVKNPYWDLETD
                     EGNELFNKISNKISQRLPKEFSIKYTTRCWSAKKI"
     gene            complement(22287..23061)
                     /locus_tag="RJ318_000522"
                     /pseudo
     CDS             complement(22287..23061)
                     /locus_tag="RJ318_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344803.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
     gene            complement(23128..>23229)
                     /locus_tag="RJ318_000523"
     CDS             complement(23128..>23229)
                     /locus_tag="RJ318_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HDV7430419.1"
                     /translation="ELVYIKQHRPDIVASWKYYQEFEKMCKELDGDI"
BASE COUNT         7874 a         4142 c         2918 g         8295 t
ORIGIN      
        1 tgactttaaa cgagttaaaa gatggacaaa aggttattat tgtcaattta aacgctcaca
       61 aagaactcaa aaatagactt ttaagctttg gatttattaa aaataaaaac ttgaaaaaaa
      121 ttcactcctc tttaaaaaat gccaccataa tggtagaact tgatacaagt tgtgttatcc
      181 taagatctga tgaagctaaa accatagaag tgaatcttat atgaaaaaaa tcaaaatagc
      241 tcttgtaggt cagcctaatg taggcaaaag tcttcttatt aatgcacttt gcaaagccaa
      301 tatgaaagta ggaaatttta gcggagttac tatagaaaaa gcaagcgcaa aaacttttta
      361 taaaaactat gaatttgaag tcattgattt gccaggaact tattctttag atggatatag
      421 cgaagaagaa aaaatcacac gtcatttttt aaatcaaaat gactatgatg ttattgttaa
      481 tgttttagat gctaccaatt tagaacgcaa tcttatcctt agtgcagaac ttttaagcct
      541 taataaaaaa atgcttttag ctttaaatat gtgcgatgaa gccaaaaaag aaggtataga
      601 gcttgacact tctattttaa gccaagaatt tcaaagtcaa gttgttgaaa tttcagcaaa
      661 aacaaaagaa aatttagaac ttttgctgca aaaaattatt attttatttg aaagtaaatt
      721 tattccaaga tctcaatttt acactccgct ttgcgaaaaa agtccggaaa aagaagattt
      781 attatatttt attaatgaac tttcaaaaaa aattattaca cacaaaaaag aagaaagaaa
      841 tttaaccaaa aaaatcgatg ccttacttat ccataaattc tttggcttac ctatattttt
      901 atttttaatg tggcttttat ttcaactcac ctttagctta gggcaaattc ctatggatta
      961 tatagaatcg ggctttaata ccttaggtga atttgttaaa aacaatattt ctaatacctt
     1021 tatcgcttca gctttggctg atgggattat cgcaggtgtt ggtgctgtga tacttttttt
     1081 gcctaatata atgattttat ttttaggcat agctctttta gaaaccacag gctatatgtc
     1141 aagagtagct tttttacttg atgggatttt acataaattt ggtttgcatg gtaaaagttt
     1201 tattccgcta atcactggtt ttggttgttc ggtacctgct tttatggcta cacgcactct
     1261 taagaacaaa agagataggc ttttaactct ttttgtgatc aattttatga gttgtggggc
     1321 aagacttcct gtatatgtgc tttttatcgg tgcttttttt ccaagtgaaa aagcaggaaa
     1381 ttatcttttt ggaatttata ttttaggtgc gattttagga ctttgtgctg caaaattttt
     1441 aagaatgaca gcatttcgtg gacttgatga accttttgtt atggaaatgc caaaatatcg
     1501 tatgccaaat tggcatttag tttggtttat ggtttataat aaagccaaaa tgtatcttaa
     1561 aaaagcagga actttcatac ttttggcctc tttgctcata tggtttgcta gcaattttcc
     1621 aaaaagtgaa gaaaatttaa atgattttaa tgctcaagaa agagctatag aacaaagtta
     1681 tttaggacaa tttggcaaag gcatagaacc tatttttcaa ccccttgagt tagattggaa
     1741 attaagcgta tctttaatca gtggtttggc tgctaaagaa gtgatgatct caactatggg
     1801 cgtgctttat tcgctaggaa aagatgtaga tgaaacaaat aatgatttaa aaggaattat
     1861 cgctaaaaac atacctatac caagtgcagt ggcttttatt ttatttgtaa tgatttataa
     1921 tccctgcttt gcagcaacta tagttttttc aaaagaaagt ggaaagctaa aatatactct
     1981 ctttctcttt ctttttacct gcacaagtgc ttatatagta gcttttatag ggcttcatat
     2041 tgctaaaatt ttattaaatt aacttgcttt taatgatgaa attttagtga tattatcccc
     2101 aaaagttttt aaaatactat aagcaatacc ttcaaaatca agcccaccgc aaagatagat
     2161 caaagtcata cgaaaagatt tactcacatc aagctttggt ttttcagcgt tcatatttaa
     2221 cttaaaatca taaggacttg catgtttaaa agcataattt tttgccgcaa ttaaaaaatc
     2281 attcttatct tttaaaaact ctcctttaac taaaataaag cttatttcaa gatatttcca
     2341 aaaatctttt gaaggcatag gattttcatc aaaattttgc tctataaaag tatagttttt
     2401 ttcaaaggat tttttataat tttctacaag caaagcacct aatttatttt tagctatatt
     2461 ttgtaaaata agttttatat tgctttcaaa ttcaaaatct atttgttcta aaattttaat
     2521 ttgctcttct agaaaaaatt cttgttttaa ctcttcatta caaagtttag cgtaagaaaa
     2581 aatatttgcc ataggctttt cataattccc aaactcatcc caaaaatttt tctcactaca
     2641 ggctatacaa ccatgtcctg cggccactgg ccaagaagtt ttagcattga atttcacttt
     2701 aggacagtta ttgtaagtat aaggtccttt acaacctatc ttaaataaac aagctccatt
     2761 ctttgcagcc tcatcgtcaa aatgttcagc aaaaatccca ctttcaaatt ttgcctttct
     2821 ttcacacata tcatgcaggc atttaccata agcccaaaca ggacgatttt gctcatcaag
     2881 ttcaggtaaa actccaaata aagcaaaaaa acttaaagtc gcaatgatat ttatatcact
     2941 tggaggacaa cctgcgatat ttactacttt ctgacttaaa acttcactaa taccacaagt
     3001 tttactagga tttggataag cagcctgaat accaccataa cttgaacaag tacccactgc
     3061 aaagatagcc ttggctttag cggctagttt ttctaaaatt tcatagccac tctctccttg
     3121 tgctcctata gtaagaaaaa aggtatcaat ggctgcaaca ccaccttcaa ccgctaaaat
     3181 aaaatcttct tctaaaacat gctctaaaag ctcttcagct ttagtgccat ttgctgccat
     3241 taaagtttca tgatattcta aagaaaaaaa atcaaaaata agctcatcaa aacttggcaa
     3301 ctcagaacgc aacaaactct cactacaccc tgtacattca caaagatgaa gccatactaa
     3361 ctttgtctta ggtgcgattt gaaaaaatct ttgagcaaga gctggaattt cattgcctaa
     3421 agataaatgc ctagcaagaa tttttacact ttcttcatta ataaccttat cctcttttaa
     3481 agtagaattt tcaagttttt taatgcgatc ttcaagtata ttttttaatt cttcattgct
     3541 aagctttgcc attttttatc ctttttgatt atcccaacaa agaacagttt gcccttcttc
     3601 atttttttca acatcaccca tacccatgat gttatatcct gcatcgacat aatgtatttc
     3661 acctgtaaca ccatttgcca aatcgctaag taaatacata gccgaatttc ctacatcttc
     3721 tatactaaca ttgcgtttta aaggagaatt gatttcattg tattttaaaa tcattctaaa
     3781 atcccctatt ccacttgctg ccaaagtttt aataggacct gctgaaatag cattaacacg
     3841 gattcctttt acccctaaat ctcttgccaa ataacgcaca gaactttcaa gtgcagcttt
     3901 tgctacaccc ataacattat aatgaggcac atatttaacc cctccaagat aacttaaagt
     3961 caaaatcgaa cccttatctt ttaaaatagg taaaactgca cgcgttaaag aaagtaaaga
     4021 atacacagaa gtttgcatag ctatatcaaa agcttctttt gaagtttcta aaaaagaatt
     4081 ttctaaagct tcttttggag caaaagcaac cgcatgcact acaaaatcaa tctcgcctaa
     4141 atcttttttg attttttcag cgatagaatc taaatgctcg ttattattta catcaagctc
     4201 ataaacaaaa ttagaattaa actcttgtgc tataggttct acgcgttttt ttaaagcatc
     4261 atttaaaaaa gtaaaagcaa gctcggctcc ttgatcaaaa catgcttttg ctatgccata
     4321 agcaatagat ttattatttg caacccctac aataaggcct tttttaccct tcataatcat
     4381 cttttatcct ttgattaatt ttataaaatt ttctactttt aaagctgcag agcctatcaa
     4441 aactccacca caatgattta cacttaaaat ttctttgata ttattttcat tcacacttcc
     4501 accataaagc aaaggtactt tggttaaact cgctaaaaat tcaagcactt tagcgatatc
     4561 tgtactttgt gcgctcactc ccgttcctat agaataaata ggctcataag cgatgatgag
     4621 tttttcataa tttaaatcaa taatttcaag ttgttttttt aaaaactcta aagtcttgcc
     4681 tgaatttttt gtatctaaat tttcacctat acaaaaaaca attttataac catgctcttt
     4741 agcaaaatca aatttagcct taataaattc ttcatctcct aaagctcttc tttcagaatg
     4801 cccgattaag acacatttaa tcccaaattc gtccaaatgt tcttttccaa gctcgcctgt
     4861 aaaagcacca ttaacacaag gataaaaatt ttgcgctcct tgtatgaagt tattttcatt
     4921 ttctaaaaat gctatactag gtggaaaaac gataatatca tcgcatttta cccccatagt
     4981 tttatttaaa attttagcat aaattttaaa gcttgctctt gtgtgattgc attttaaatt
     5041 tgcagcaaag atcattcatt ttccttagat cttaaagctt ttacacctgg aagttctttg
     5101 ccttctataa gttcaagaga agcaccacct ccagtagaaa taaaagtcat ttcatctgca
     5161 tcacctgcac gcgcaaccac atcagccgta tcaccgcctc caacaacaga agttgcatgt
     5221 ccttcgctga tataatgact cattttaatg ctaccttttg aaaatttatc aatttcaaaa
     5281 acacccatag gtccattcca ccaaatcgtt tgcgcatcag aaatcacctc cttaaaaagt
     5341 ctcacactcg caggtcctat atctaaaccc atccaaccat ttggaatttc ttgcgctgga
     5401 acaaatttca tcggcgcatc ttgtgagcac gcaggagcgg ctacaacatc tactggaaga
     5461 taaattttca ctcctaaatt tttacccttg gtaagaattt tattagcttc ttctaaaagt
     5521 tcttcttcta aaagtgaatt tcctatatca taacctaaag cttttaaaaa agtaaatgcc
     5581 atacctccgc ctatgattaa tttatctacc tttggtaata aatttgtcaa tgcttgaagt
     5641 tttccactta cctttgaacc tccaacaaca gcgacaaaag gacgtgctgg atgtttgata
     5701 agattgcttg caaaatcaat ttctttttgg agtaaaaatc ctgcgccttt gtgtttttca
     5761 tcaaaaaatt tagtaatcgc ctctacacta gaatgtgctc tatggcatac tccaaaagca
     5821 tcattgatat aaacttgaac catagaagca agttctttgg ctaaattttc atcattttta
     5881 gtttcgcctt tttcaaaacg caaattttca agaagtaaaa tttcacccgc ttttaaattc
     5941 atagctttgg tttttgcatc ttcgccgata acatcttttg ccataacaat ttctttatct
     6001 aaaagtctag caagacgctt agccacaggt tctaaagaat atttagagct aatttctttt
     6061 ggacgcccta aatgagaggc taaaatcaca ctacaaccat tatccaaaca atatcttatc
     6121 gtaggaatag ctgatcttat gcgtctatca tcagtgatat ttaaaaaatc atcttgagga
     6181 acattaaaat cacatcttat aaaaactttt ttcttagcta aatcaatgtc ttttatagaa
     6241 ataatatcac tcatgattaa gccttatttg caatatatac tgccatatct actagacgac
     6301 ttgaatagcc ccattcatta tcataccaag caattacctt gataaaatca tccgcaatca
     6361 cttgagttaa atcacttgct acaatagctc cataagaaca agtgataaaa tcgcttgaaa
     6421 ctctttcatc atcatctacc attaaaatgc cttttaaatt tgtagctgca gcttttctga
     6481 aagcttcatt gatttcatct ttgctaactt tacggcttag ttgtgcagtt aaatccacgc
     6541 ttgatacatc aatcactggc acacgcatac tttgtccatg aagcttgcca ttaagttcag
     6601 gcataacaag tttcatagct tttgctgcgc ctgtagaagt tggaatgata ttttgcgctg
     6661 cagcacgaga acggcgttta tctttagctt tagcatcaat aatactttgt ccatttgtat
     6721 aagcatgtat tgttgtcata agtccttttt ctatgccaaa attatcttgt aaaacacgac
     6781 aaacaggacc taaacaattt gttgtacaac ttgcattaga aataatgctt tcacccttgt
     6841 aaagttctga atttactcct aaaacataag taggagtatc atcttttgca ggagcactca
     6901 tgatcacttt ttgtactccc atatctataa attcttgaca ttttgccata gttaaatgcg
     6961 ctcctgtgca ctctaaaaca atttgtgcgc cgtgttttgc aaagtcaaga tcttttacat
     7021 tgcgactttt aaatactttg atttttttac catttaccac taaatcatcg ccttcactat
     7081 caacactgcc tttaaattca ccatgtactg tatcgtattt aaaaaggtat tttgtaagtt
     7141 caatatccgt agtatcattt atcgccacaa gctcaatatc atttctttct aagatgattc
     7201 ttgcaacaca tctgcctata cgtccaaaac catttatagc aacttttaca gccatttaat
     7261 ttccttttgc aaaatataat gctaatattc tacaaaaaaa aggttaaaat tttaatgaag
     7321 atagcacttt ttggtggcag ttttgatcca ccacataatg gacacaatag cgttatttta
     7381 gaggctttgg aaaaattaga tattgataag cttattatta tgcctactta tatcaaccct
     7441 tttaaacaaa actttagtgc tgatgaaaag caaagattct tatgggttaa aaaactttgg
     7501 ggacattttc caaaagttga aatttgtgat tttgaaacca agcaaaaacg ccctgttcct
     7561 agcatagaaa gtgttaagta tctttataag ctttataatc ctagtaaatt ttatctttta
     7621 atcggcgcag atcatttaga aaaacttcat ctttggcatg attttgaaaa acttaattct
     7681 ttagtagaat ttgttattgc taatcgcaat gatatagaaa ttcctaagaa ttttaaagat
     7741 ttaaaaaccg ataaaaaaat cgcttcttct ttcatacgca acactttaaa tacaaatgaa
     7801 gtttgcgaag aaattaaaga tgaagtaaaa aaatattatg aaaaattaca aaaaaattga
     7861 tacaatttca aaaattaaag gacaataatg caagaaagaa tagatttaat cgttaaaatt
     7921 ttagatgaaa aaaaagctga agatatcaaa accattgaca tgagcgagca agaatacttt
     7981 gtaaaatatg tcattatcgc agctacttta ggagaaagac acgctctatc cttgatcgat
     8041 gagcttaaaa cacaacttaa agccaaaggt gaggaatttt taaacataga tagtagcgaa
     8101 gaatggagtg tgattgatct tggtgatatt ttaatccatc ttttaacacc agaacacaga
     8161 ggaatttata atatagaaga attactagaa aatcttaaaa aaggtagggt ttaaaaaggc
     8221 taaatttaat tagcctttta acttttagag attatcaata tattctttaa tttctttttt
     8281 gattttctct ttttgttctt ttaaagcttc ttttttagct ttatactcag ccttactcat
     8341 ataatctttt tgttctttta aagcatcaag ttctttttcg attttttcta cttcttgttc
     8401 tttaagtttt ttagcttcta actttttatc ataaaacata ggatctttag cacaatcatt
     8461 ttgtacttgt tttaaagcaa gctctaagct taaagttcta gctgtatcat tatgcgcttt
     8521 agaaaaactg atttctttat tgatacgatc aatttttcta tcacattcac ttgcgccaaa
     8581 agcaaacgca cataacaaaa gtagaacaag tatttttttc atttttaatt cctttttaaa
     8641 ataaatttaa atcgcgaaat attatctcat caattcttaa gcctagcttt tatctcatta
     8701 aacaaactaa ataccgtact ttcaagctct tttgctcttt ctaaagaagt tgcttcaaag
     8761 cgtgtgataa gataagggct ggtgttagat gcacgaagca aagcccatcc atcgccaaaa
     8821 tctatcctag ctccatcaat ttcacaaaga cttttaacac cttttaaagc tcctttttca
     8881 atctcttttt gaaattcttc cacaagttta aatttttctt cttcatttac aggaatttta
     8941 atttcaggtg tagtataaag ttttggtaaa gctttaatca tactttctaa atcaaaacct
     9001 ttataaacaa gttctaaggc tcttaaaaat gcgtaaattc catcatcata accaaaatat
     9061 ctatgtttaa agaaaatatg tccactcact tcagcagcta aatcaatatc tttttctttc
     9121 atcatttttt tgatattaga atgtcctgtt tttcccataa aaatagttcc aaatttagcc
     9181 acttcatcaa aaagattttt agaacatttt acctcaccta aaatgcgtgg attaggaata
     9241 tttttagcaa acaaataaca aagctcatct ccacaaaata cataagtttt actcaaagca
     9301 accattctat cagcatcccc atcaaaagca aaagctaaag aataatcttg attttgattt
     9361 aaaaactctc taatcgcact taagttttct tcttctgtag gatctggagc atggtttgga
     9421 aactgtccat caggctttgc aaacattaca tgagctttta aatttaaagc cttgattaaa
     9481 ggctttatca ccactccagc cgcaccattt gtgcaatcaa caccaaattt ataattaaaa
     9541 tcctttaaaa aactaaattg ctcgcacata aatttcacat aaaggcttaa aatatcgtat
     9601 ttttctactt ctaaattttc ttcaatatca tcatctaaat gcttataaac ttcttttgaa
     9661 aactctttta attccacgcc aaaaaaactt tctttattga tagtgatttt aaaaccatta
     9721 taatcttttg ggttatgaga gcctgttatc ataacatttg catcaaattt caagccctca
     9781 taaagactaa aatatcccaa tggagttggt acaagcccta tatcatagat ttttattccc
     9841 gctttgttaa gtccactcac tagataatta aaaagttcat ttgcactata tcttgcatca
     9901 tagcccacac ttacattttt acagccttta tttagcatgg tttgtcccaa gcaaaaacct
     9961 atagccttaa cacttttttc atttaattct ttgccataaa gccctcttat atcatattct
    10021 ctaaaaatca catctaacat ttttttcctt caaattcatc tcttctttga cctaaattta
    10081 tcgtttttct aaagcaaatt tggatagaaa agaaattttt gctacaattt tacattaatt
    10141 tcactaaatg aaggaaaatt tatggatgaa gaattagaaa acgaagaaac gaaaaagaaa
    10201 aaaggtggtt cacttgtaat tattattgtt attttacttt ttgttttact tcttagtatt
    10261 atgggagtga ttgcttggct tatttcaagc agttcaagtg atgaaagcga agtcaaagaa
    10321 gctccaaaag aagaagcaaa agccgataaa cctaaagttt cagctcctac tcaacgaggt
    10381 agtgattttg ctaatatagg tcctatgtat ccacttgatc cttttaccct aaatctactt
    10441 agcgatagtg gctcaagata tgtaaaatgc actatagaac tagaacaaaa tagcgaactt
    10501 ttaaaacctg aacttgataa aaaagtcccg gtgattcgtg atattattat tcgtacatta
    10561 acagctaaaa cttttgaaga agtaagtaca caaaaaggca aagaacgttt aaaagatgag
    10621 ctagttggaa aaatcaatga aattttaacc gatggcttta ttaaaaatgt ttattttacg
    10681 gattttgtag tttcttaatg cgtgtaggct gtgatatcat cgccatttct aggatagaaa
    10741 aaattcattc tagacatggc aaaaattttt tggataaatt tctaagccca aaagaacaaa
    10801 tactcattaa aaatccagca actctagcag gtctttgggc tgctaaagaa gccgctagca
    10861 aggctttagg tgttggaatt tgtgaattat gcagtttttt tgatattgaa atatcaaaag
    10921 atgaaaaaaa cgcacctaaa ttaaaatatt ctcaaaaaat tacaaaagat tttaatatca
    10981 ctcaaacttc cctaagcatt tctcatgata atggttttgc tatagccata gtggctatag
    11041 tttgattatt ttcctatagt ttgcttgtct aaatttcttg aaattatgaa atctaccaca
    11101 ggttgttctc ttttatttgc tcttttacaa tgatcttttt gaaaaaaatc tgtgattttt
    11161 ataacaatcc ttgcccattt tttacgattt ctttcacgcc acgcatgaga agaaacgctc
    11221 tcccaagcat agccattaaa caagcttgca tttacaaaat gatctaaggc tctaacaccc
    11281 tgtcttgctc gtgcggtatt aaaaaaagtt cctataatca cgataaaaag atatcctaaa
    11341 actgctaaag gtactatcgc acaaagcaaa atagtacctg ctaatttttc ttttaagctt
    11401 ccttttaagg tgcgttttac acgacgacga aaattggcgc gaattttagt tctaactctt
    11461 ttcataactc tcttttgcta aattttatcc tcataccatt agccgaacgc actgttaaac
    11521 gtcctactac atcaggtaca aaaccttctt caagttctag tttgtaagtt tttaaaatat
    11581 tagccaaaat caaaatcgct tcttgcatag caaaaccttg tcctatacaa attctttccc
    11641 ctaccccaaa aggcaaataa gcatcttttt tatattctcc ttcaaaacga gaaggattaa
    11701 atccatgcgg atttgtccaa aattcttcat gtctgtgtat caaccaagga gcaatcacca
    11761 ccccagaatc ttttttaata agcttatctc taacttgggt atcttttttt gcctctcttg
    11821 caaaaaatcc aacaggagga taaagcctta aagattcttt aaaaatattt gttaagtatt
    11881 taaactgtct tagatgcgaa atttcaatgg ctccaccctg taaaacctga gtaatctcct
    11941 cataagcttt ttcttgctcc ttaggataaa gactaagcaa ataaagcgtc catgtcaaag
    12001 aacttgctgt ggtttcatgt cctgctaaaa aaagcatagc cacttgatct aaaatttcct
    12061 caaaagaaaa acgcttattc gtatccgcat ccactactaa aagcaaagat cctaaaatat
    12121 cttcaaattc tgcattatct gccatatcat atcttggttt tatgatgtca cttaaaacct
    12181 gcctaatcac atctccggcc ttagcacgct tacgatctcc taatacataa gaaagccatt
    12241 ttggaaaacg aaacatacga cgcatggctg tatgcacact ttgctcttga aaagtcacaa
    12301 aggcatttaa gattttttta cctttttcct catcgagttt tgaagacata atggtgcgaa
    12361 aaatcacatc agcggtaata aaagtcatag cctcatctac ttcgataata gcatgatttg
    12421 gatacttgct aaaacgatcc atcatatctg ccacagcttc actcataaga ttaaacactt
    12481 tattgatacg agtcatttca aaacttggac gcaaaagctc tctttgtttt ttccaaactt
    12541 caccatttgt agtaaaaatg ctctctccta aaagcggact taaaagctca tgcaaaaatg
    12601 cacttttagg aaattctcta acttcatcaa ccatcattct tttaacttct ttagtgtcat
    12661 ttatgacata aagatcaaaa tttggcatct tcacatagcc tgtttgcatt ttataactac
    12721 gctcataaag cccgtcaagc caagatctac gctttaacaa aaaagttaaa agtgtagaag
    12781 ccttattttt ataaggtttt ggaaaaaagg gacattcact catattttta ccttttcttc
    12841 taaaaattta ggcattatga tgaaagaaaa aaaatcataa tcacctttaa cactaatact
    12901 ataaagatat aaaaagtgtg ctttgttttt atctcttttt atttttttat actcatgttt
    12961 ttcatataaa gtgtgaaatt tagcacttaa aaatgggggt gtaaatttag catttacgcc
    13021 actcgtgcgg aaaaaatcca cttgaggaaa acatgctcca tcaataatcg atgtgtaatc
    13081 ataccatttt aaatcaaacc ttgaaacaaa ttcaagcttc tttctaaatt catccgcttt
    13141 tttttgataa ctcactaaag gaatgcattc tcctagagta agaattttta acttatgaag
    13201 taaagataaa tctaaatttt gtcttaaaat acactccaaa acttctatac aaactatagt
    13261 tccaacacta tgtgctacta aaacaagttc ataatcttgt ttattttcat tttgttttag
    13321 cttatctact atggtattcg caaaaagctt gattctttct tgcatagtgc ctgttttttt
    13381 atcttgccaa gtagcacaaa aagcacaaat tcttgctatc caaaatacag ctaatttctt
    13441 acctaattta aataaaaaat gatttagtaa aaatcctaaa aaacatccta tgatgatagc
    13501 taaagaaaaa tgcatataat tttgcaaaaa agcaaaactt ccaaaagcca aaaccaaaga
    13561 aaatagtaaa gaaaataaca cataaaaaaa aggataataa cctgtgataa gttgataaat
    13621 cgactctttg ccaaatttga taaaaagtcc tgtgatagta taaattctaa aaaaactata
    13681 acaatctgcc aaagcatctt tataattttc tgaccaattt ttcttaacaa tatcattcca
    13741 tgttaaaaaa tgatatttag tttgtactcc ttcgcaagaa atttgaaaaa aaggaaattg
    13801 ctcatttttt tcaattttac ttaaatcagc tttaatgtta aaagcatgag aataatcttt
    13861 taggtttttt ttaaataaat cataataaaa tctataactt ttaggatcat atcctgctat
    13921 ataaaatact tccctatcca tacaataatt tctttttgct tttaattata acaactttgc
    13981 tttaaaagct ctcttaatca aagcttttta gtcttatttg tctaaaaaga aatttttata
    14041 aaaattgccg ttgaattgat tagtttgtaa aagatatttc ttaaaattac ataccaaaac
    14101 aggattgggt ttataagcat gagcttcacg ccaaaaaaat tgaagttttt ttggataaga
    14161 taagccttca aaattataaa aagcattgcc acaaacctta gtcggacagc cttctaaaat
    14221 agcactaagg cctactgttg aatttatagt aatacaaccc aaagcctttc ttaaaagaac
    14281 tggcaagtgg gtatcatgaa catataaaac ccttccttct acatgatatt ttcgacttaa
    14341 atcatttata agtttaaaat aattcttata gcccctatcc atgggatggt gtttaaaaac
    14401 tagataagat ttagctcttg catggtttgc aaaagaaagt atggtttcct ctataaagtg
    14461 ctctatgctt tttttgtaat gatatttaat ttgcgtatcg ctataaactt gtaaaatcgc
    14521 caaaaagtac tttttttcta aattataaat cttttcattt agtttttttt ctgtaatctt
    14581 ataaagatac tttctataca atgatctaaa ccaaaataaa aattcaaaag gatataaagt
    14641 gcgatgatga agtttgttgt taaaaaatgg agccaaaata aaagcaaaca accaatacaa
    14701 aaaagcatca aaagccataa atttaaatcc acctggaatt tcttttatgc tttctttggt
    14761 aaaaatattt tgagaaagat aaaaattttt atcacgcggt aaagaagaat ttgcattcac
    14821 cccatctttt tccaaagtaa tacaataagg ccttaaatat ccttcttcaa aaatccatat
    14881 ttcaattcct aattctttag ccactttaat agccttagca tgtataatgc gacaatcatt
    14941 atacattaaa atagcatcga tttttttatt ttgaaaaaaa tctctataga aattttcaag
    15001 atctttttca tcacacttac acctcgttcc gctaggatag aaaaaaaaat ctccgccgtt
    15061 aaaattgagt ttaaaaactt tggtttggtt ttttctcatt ttcactgcaa gatgatgaaa
    15121 aaaatttccc acaggccctt gcaagagtaa aacattttta ccgctaaatt cttttttaat
    15181 tttagtgcta aatctcattt ctttgctaaa aattcataaa atcttcttat ttttctaagc
    15241 ataaaagttt taaaatctat tgccaatttt atatattttt ttgaaaaata agctttttgt
    15301 aaatttagca ttatatctaa acaaacttca atttcacata aagtttttgt tttaggattt
    15361 atatatcttg gatatatgat taaaacacct gctacaagct cttctaggct tagttttctt
    15421 attcttcttt cacatctata tttatctttt gttaaacccc agcccgcata aaaaggcata
    15481 ccataagtaa aaactttttt agcccttaaa agagcatcaa aaccacttgt agaagtaata
    15541 gtgtgaattt catcagcaat ttttatagcg ctatcaatac tgcaatcttt tacaatctca
    15601 tcacaaaatt ccaagatgag tgtttcatct tttaaaccta cacggttacc gcttaacaca
    15661 tcaggatggg gtttaaagat gatataagca tcttgatttt tagcacgcac ctccttaagc
    15721 aaatcaagag tagataagcc aaaaccccct aaaatcatcg aagcatcatc ttcaacttga
    15781 gcagggatta aaataatctt ttgtcctatt ttggcattga tttttaagtc ttcatgcttt
    15841 aagccattgt attttgaaaa gcggttctca agtaagattt ttataatatt ttttgcccta
    15901 tttagcatat tttcatcaaa aatttcgttt tgcaaaagct cttctaattt acttgcttta
    15961 tttggatcta tgtaaagtcc tttatcatca acaattaaag aaaaagggcg cgtaagatca
    16021 gaacctaaag agattgagcg aataaatcca tcttcaacta aagaaatttt gggagtaaaa
    16081 tggagcaaat tctcatcttg cgcttttttt ataagagtag ttttaagagc gttataatct
    16141 atccttttac cccaaatgaa aaatttatca ttttctttaa gtttatatct agctaaagat
    16201 tttaaagaat ttaaaaaaat aatttcatta tctttagcct taaaaaaagg cttgataaaa
    16261 tgccttttcc atagggtaaa gcctagcata aaaagcttgt tagaatttac cttttctata
    16321 tctttatatt ttgctaaagt ttgaatagta tcaaaaatat tacttttttg atttaaataa
    16381 ggattaaaat actcagcata aagtatataa gcagcataga aaacttcttc taaacttctt
    16441 ttttgcatcc ttcttttaca ctctaattta tcttttgtta gaccccagcc cgcataaaaa
    16501 ggcatgccat aacaaataca ctcacattct tgcatcaaag cttcaaaacc cataccagaa
    16561 gttttggtat aaaccttatc aaaaaactca agcaaggcta tgggattaaa attttcagtg
    16621 attaaaatac attctttagg taaggaattt aaatctaaat cactttgttt tttaccactt
    16681 aaaacatctg gatggatttt tatataaatt gtagatttag gattttcttt tatggcatct
    16741 tttatcatat caagagtttt aaaatcttta gcaagcccaa attcaagaga ggcatcattg
    16801 gccgtttgag tgatgattaa aacgcgtttt tcatcttttt gaaaataatt atctggaata
    16861 tcgagattgt tattatactt gctaatttta tattttttga taagctctat agctttttta
    16921 gcttgcttga tttcttcatc tttaaattca caagtattta aaagattttc aagctttgaa
    16981 ggcattgttg catcataata aatgcctata tcatctttaa ccatagaaaa acttgggcta
    17041 ttttcaaccc ctaagtttaa tgagcggata aatccatctt ctaaaagtat gaatttagcc
    17101 ttatattttt tagctaaatt catagctttt aaacctgatt ttttgcgtcc ccaaccaaag
    17161 aaaagatcat cttttttgat ttttaaattt ttcttataca aagaaatggt gtaaaaattt
    17221 ctaacattag caataagttt ttttgatatt gagtaatact tcacaatgcc aatttcttta
    17281 ttataagttc aactttttct tctaaattat ttcgacaaga attattgatc actaaatcag
    17341 cctctggttt atcaaattct atatcaacac caactacatt atcaatttct ttatttaaag
    17401 ccttagtata aagccctttt tgatctcttt gtattaattc atgcatatcg cattctatat
    17461 aaatttcata ataatttttt aattgctttc tattgtaatc ataaatctca ttaaacattg
    17521 aaatcgtagt gacaataacc atcatacctt gatcgtttaa aaattttgca aatttagctc
    17581 ttttcaaagc catatctatg cgaccttgtc tatcgtatgc ataatgtcct aatatttctc
    17641 ttaactcatc tccatcgaga taaataaggt ttttatattt taattttaat ttttcataca
    17701 aagcttgacc tatagttgtt tttccacttc cagctaaacc agtaagccaa ataatataag
    17761 gattattttt caatttgcac ctctaaatca ctcataaaat caatttcaca ccaattgcca
    17821 tcaatttcca ctgcttttgc gttgttgtat ttttcaatta aagcttgcaa aaaacttgtc
    17881 atgtacatat tttcaaaatt tttattatca tataaaatat ctcgatcaag catttcataa
    17941 aaagcaataa cttcggaaag aaattgataa gaaaatttaa aaagtcctat atattgagct
    18001 tctatctcat cataggcatt agcttttttt ccaagttcta taatataacc atttgtcatc
    18061 tttaatgttt cagcatcttc taaaggattt gcaaagcgtt tgctccaaag cttacaccaa
    18121 gacttatcaa ctactatagc aagttcttct ttggcattta taagcttttg cacgcaatct
    18181 tgaaaataaa caatatccgc ataagaaata atcaaatctt gtttttcttc gatgcatttt
    18241 aacataaaat ctttagcgca aaaaaaagta tgaaccatat tggttttatc atattttgaa
    18301 ttaataaaaa aatgctcaat atcatattta ttaagataat tttttagcac atcgtttaaa
    18361 tatccaccca caacagctat ttcatttata cctgctgatt ttaaagcttc gatttcataa
    18421 tctattattt ttttattctt atactcaacc atacactttg gttgatcttt tgttaaaggc
    18481 atcagccttg atccaaaacc tgctgctaag ataattgcat tcatattatt ccttgattaa
    18541 actaaaccac tcttttaaaa tttgaatatt attaagtcca ttttctcttt caatatgcca
    18601 cattatacca aaaatatttt catacttatg tttaaaagct tctatggtat tatcttttgc
    18661 taagcaaagt tctacaagat cttcgcctaa tttttcaata gcaaaattat gaaaagaatt
    18721 gcttataaat ttttcttttg agaaaaatac ttcatgtttg cctatatgat tttcacaagg
    18781 acttatatgg ctgttaaaat aatgagctat catctgagcc cctctgcaaa ttcctaaaag
    18841 tggtattttt tcttctaaac aaatttctat aacttgcttt tcatataaat ctctcttttt
    18901 ggataaaaca ttaggactat aaaaacttaa atcattgcca ccacttaata tcacagcttt
    18961 tattagatgt ttataataag aaaaatctat ttcatagcta agaggaagag gagtaaaatt
    19021 tttaaataaa tctttattaa ataattttcc ccaatccaaa gccaaacatt ctcttttttc
    19081 atgataacta tcgttgcaaa taagcctttg agtaatacct ataaacaaaa tatttgctca
    19141 ctttcacatt ctatatttat ttttttagct tttaaatatt tttcaaaatt ttcttctcca
    19201 actcctataa cagcaggcat tccaagttct gaggcacgaa tggccatatg tgaattagca
    19261 cccccataac atgtaataag tcctgctata ttttttgtaa ataaataatc atatccagga
    19321 tctgctgcat aaattaaaac aatctttcct tctaaatctt tatcattttc cttcgccgta
    19381 aatgcagtaa tgctcttttg tgtaataaaa tttggaataa tgctatgatt ataaaaagaa
    19441 aaaatttcat cagcattaca aagtaaagaa ggaagtttta tagcttgtgt aagttcatat
    19501 tcttttttat tgcgattaat ttcttctata aactgctctt ttggatttat agaataaaga
    19561 ctagaataaa gatttaaaat gctttttata tcaagatgag ccaaatcttc tttttcaata
    19621 tcataatatt tgcctaattc ttctatataa actatggctt tagaaagcaa tctagtaaat
    19681 tcaaatttaa cgagctctct accctcgata gcctgtttta aaaaatcaaa aaattcacaa
    19741 gcattaattt ctagtccatg ttctttaagt aaagcattta aagctcttgt cttttcttct
    19801 gaaaaaacaa aagctttatc ttgtaaataa actttactat ctttttgatc tgcatcaaaa
    19861 taaagctcaa aatcttcatc ataccttggc gataaaatat tataagttcc tgctcttaaa
    19921 tgtccaaaat cttttaaaaa ttgatctttg ttgtgaaaat taagatggtt tgtttgtttg
    19981 cttaaatttt tgctcactgt attgagtgaa tttaaaaaat catctttttc ctctttggtt
    20041 ataaaatcaa tctcaactaa agaatttaaa agttgcattg ctacaaatgc agccctagcc
    20101 accccagcaa aaggcaaggt tccataacgc ttgcattctt caataagcca ataaatttta
    20161 tcaattaaag aaaaattaga attaataatg ccatcatatc tttcttttag cttataagct
    20221 ttttgtatgt cttttaaata aaaccctgat ctaggattaa taatcttatt tgtaagttct
    20281 aataatgaaa attctaatct tttgatttca ttttcattaa aaccatgatt taaaagttct
    20341 tctaattttt tagaactatt aaagtcataa caagaataaa caatattaaa ttcaatctta
    20401 tcgtgcaatt catgattttt attaagctta tctaagtaaa aattgacaag tttttgtgca
    20461 atattttcat ctaatttttt tggtataaaa gaattaaaag ataatcttac atccacataa
    20521 ggaatgccta aaaaagaatg gattaaagga tgggatctta gatctctata accataatta
    20581 tctctttgat acgcccagat attatccgta atgatttctt tatataaact aaaagctaaa
    20641 cgcttaggtc ttaaccctat gatttcagct ggattccaat caggcattac cccaaaaata
    20701 gctttatctc ccaaaactct agatcttgat tcttttaaag actcaaaacg tttataaaat
    20761 ctatataaag cttcttttgg taaagaatga aataaattat ttttttcatg cataaccaaa
    20821 ggacgcactt gtaagcaaaa aagttcttcc ttatcatctt gaatagcaaa tgcaaattca
    20881 acatctaaaa aatgacaatc atataaaact tctaattctt ttataagttc tataattttt
    20941 tgaagtctaa tatctttaaa ttctaaataa tttctgtaat gatagtaagt ttttgcactc
    21001 ttactgcttc catctgtaat agagctattt gaaccatttt catcatattg aagacaaaaa
    21061 taaggggaaa aattatcctt atcaacacta aaaccaactc cacaaagagt aatgttttca
    21121 agcataggtt gaactaaaat ttcatcactt tttgatggca tagaattggc aacttcatat
    21181 aaagctttta ataactcatc tttagaatca gctttaatat ttgccaaaga aagaaaagca
    21241 cctgcattgg agtttttcat gctatcttca cttaaagaag aacttcttat aatgagtcta
    21301 ttagccttta aggtttgaat gtcctgtaaa actttatctt catttgatat taattcttca
    21361 agcgaagtta aaaccaaagg tagaactttt gcttttttta attttgtttg taaatttttt
    21421 aaattttgtg ctttggtttt aaattttaac tccgccatgt ttttccttag ttttatattt
    21481 ttttagcact ccaacaacga gtggtatatt ttatgctaaa ttccttagga agtctttgtg
    21541 aaattttatt actaatttta ttaaaaagtt catttccttc atcagtctcc aaatcccagt
    21601 aaggattttt aacactcttc catgcattaa tataattttc aatgctttga tgaaaataaa
    21661 aatcctcttc aatataaaca atattatcaa aaagatcctt tcgactctct ataattggtc
    21721 tttgatcttc tcttcttgtt ccccttgtat aatttggtac aaattctaca atagtatctt
    21781 cagctatttt ttgcacagga tcgtttaaat ccctgtgatt ccacatacaa gaaaaatatc
    21841 cctctgattt taataagcga tgcgcttcct ctaaggcttc atttctatcc attacattaa
    21901 aactactacc aaaagtcacc caatcaaatt cactattttg gagtgttgag tttaagcctg
    21961 ttgctctaac ccagtcaatc ttttgatcct tggttctttc tatcccgatc tcacgcatcg
    22021 catcatttgg ttctacagat actaccttac atcctctttc taaaagcata atgcttaaat
    22081 ttccagttcc tgcaccgata tcagcgactt taatatcttt ttttccaact aagctaataa
    22141 gcatatctat agtttttgga gcataatttg gtctatagct ataaaattta gcatgcttgg
    22201 tataatccca cacttgttct actagttttt gcattttatt tccttttttt catctttgac
    22261 aagcttgatg aaaaaaagga ggtattttat gcttttctag ctgtccatgc tcttatttta
    22321 taaggaatct ctatactttg catatgagaa attttagctt ctatcatctc taaaatttcc
    22381 ttccatcttt tttcacctgc ttgtgcttgt atatcattta cagaatgcca agctccaaga
    22441 taacgctctt tatcccaaaa ctctttatag tcacactcca taaaaaagca gtctatgaaa
    22501 tctcctgttg aaacaagaat ttcttcccat tttttaacat tttgagtgcc actgcttaca
    22561 cgagcaagat ctggaacaat atgtttaatc tccttttcaa tttcatcaaa aaccgaaccc
    22621 tctacaatgt ggcgaggatt ccaaatcgca gtaaaatacc cccccccctg tcaatatacg
    22681 attaaattct gggagagatt ttttaggatc tgtccaatgg aaagaactag ccatgatgac
    22741 ccaatcagct tgattattgc tcatgcaggt ttcttcgcca ctccctttat gccaagaaat
    22801 atttgataaa ttttgtgtaa atttttgccc ttcttcacgc atattatcgt ttggttccac
    22861 agcactaatt tggcatccaa acatttctcc caacatctta gtaagttttc cagttccagc
    22921 tcctacttca acaatattta aatcttttaa atttttattt ttatcattga tacaagctac
    22981 aagtttttca agtaaaaacg gactataagc aggtctattg tgataatgtt ttgcaacttt
    23041 tgtaaaatcc ccttgtttca tattcattcc tttttctaaa ttaaaacata attatatctt
    23101 ttttttatta atttacaaat ctttctccta aatatcacca tccaactcct tgcacatttt
    23161 ttcaaattct tggtaatatt tccaagaagc tactatatct ggacgatgtt gtttaatata
    23221 aaccaattc
//
LOCUS       DAPIYB010000017        22961 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.017, whole genome shotgun sequence.
ACCESSION   DAPIYB010000017 DAPIYB010000000
VERSION     DAPIYB010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22961)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22961)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22961
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.017"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            14..463
                     /locus_tag="RJ318_000524"
     CDS             14..463
                     /locus_tag="RJ318_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDV7430420.1"
                     /translation="MSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAY
                     EEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYL
                     LAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGACKM"
     gene            528..1565
                     /locus_tag="RJ318_000525"
     CDS             528..1565
                     /locus_tag="RJ318_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7430421.1"
                     /translation="MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIF
                     NFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKINI
                     PIILSTNIKDLNVNGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKN
                     ILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYV
                     IYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNF
                     YSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDNFFEQGVKFE
                     VISFDKFSLGF"
     gene            complement(1562..2293)
                     /locus_tag="RJ318_000526"
     CDS             complement(1562..2293)
                     /locus_tag="RJ318_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HDV7430422.1"
                     /translation="MKPIIIFFSLFLIPLFADDLKSGFGEEYYKLDIDQKRQIFFIKM
                     NEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLITIKNKYRIENLYDFAE
                     YKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHK
                     IKIFDSLQDSVDSYVLNLNRHFAYEKFRDARAKFESEGKEITGLEAIKTLDSYSERKG
                     YYINLITKIIKRYNLEKYDTNSNNT"
     gene            complement(2268..3017)
                     /locus_tag="RJ318_000527"
     CDS             complement(2268..3017)
                     /locus_tag="RJ318_000527"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDV7430423.1"
                     /translation="MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFI
                     VILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFAHHINKINPNMSFLTGAGIIKAK
                     VNQDKVEVSLGKIKSVQNTFEELGKTWQLCNTGVPHLVHFCQNLDEFDTMLCQKMRQK
                     YNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPK
                     SGEEVGFAYKNEELFFEGKVKYCFEANYNFF"
     gene            complement(3014..3619)
                     /locus_tag="RJ318_000528"
     CDS             complement(3014..3619)
                     /locus_tag="RJ318_000528"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDV7430424.1"
                     /translation="MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHKILDENA
                     LELEKIFSPFSLKNLLKKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQMQ
                     ILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLD
                     SQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGNM"
     gene            3680..4669
                     /locus_tag="RJ318_000529"
     CDS             3680..4669
                     /locus_tag="RJ318_000529"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDV7430425.1"
                     /translation="MKISYEDAGVSIDNGNTFVEAIKPLVKETFNDNVVGGIGSFAGA
                     FRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFL
                     DYYATAKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMA
                     EEDEIDRSKFVKNGDILLALSSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDIL
                     LEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPRGMGATIRKHHLKTPEIFYT
                     IGQAVEESEMYRSFNMGVGLVMVVDPSNVSKILENSDAFIIGEICINEGIVLE"
     gene            complement(4690..5883)
                     /gene="dcuC"
                     /locus_tag="RJ318_000530"
                     /pseudo
     CDS             complement(4690..5883)
                     /gene="dcuC"
                     /locus_tag="RJ318_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856491.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
     gene            6339..9293
                     /gene="cas9"
                     /locus_tag="RJ318_000531"
     CDS             6339..9293
                     /gene="cas9"
                     /locus_tag="RJ318_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344900.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HDV7430426.1"
                     /translation="MARILAFDIGISSIGWAFSENDELKDCGVRIFTKVENPKTGESL
                     ALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPY
                     ELRFRALNELLSKQDFARVILHIAKRRGYDDIKNSDDKEKGAILKAIKQNEEKLANYQ
                     SVGEYLYKEYFQKFKENSKEFTNVRNKKESYERCIAQSFLKDELKLIFKKQREFGFSF
                     SKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINLLN
                     NLKNTEGILYTKDDLNALLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKK
                     YKEFIKALGEHNLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKD
                     HLNISFKALKLITPLMLEGKKYDEACNELNLKVAINEDKKDFLPAFNETYYKDEVTNP
                     VVLRAIKEYRKVLNALLKKYGKVHKINIELAREVGKNHSQRAKIEKEQNENYKAKKDA
                     ELECEKLGLKINSKNILKLRLFKEQKEFCAYSGEKIKISDLQDEKMLEIDHIYPYSRS
                     FDDSYMNKVLVFTKQNQEKLNKTPFEAFGNDSAKWQKIEVLAKNLPTKKQKRILDKNY
                     KDKEQKDFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAK
                     SGMLTSALRHTWGFSTKDRNNHLHHAIDAVIIAYANNSIVKAFSDFKKEQESNSAELY
                     AKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEF
                     YQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFAL
                     KVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPEFVYYNAFTS
                     STVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVT
                     KAEFRQREDFKK"
     gene            9290..10180
                     /gene="cas1"
                     /locus_tag="RJ318_000532"
     CDS             9290..10180
                     /gene="cas1"
                     /locus_tag="RJ318_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HDV7430427.1"
                     /translation="MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINII
                     VLESLQISISSALFNAFAKYKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSA
                     QKKAILWQKIIKNKILNQAFILKKHNKIEQSNELINLAKKVSLNDSKNIEAVAAALYF
                     KTLFSVSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALC
                     DDLIEVFRASVDDCVLKLKGESEFLSKDDKRALISNLQSKINFNGQNYPLNRAINHYV
                     ANFKNALLYEDELKIVKFDD"
     gene            10173..10604
                     /gene="cas2"
                     /locus_tag="RJ318_000533"
     CDS             10173..10604
                     /gene="cas2"
                     /locus_tag="RJ318_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HDV7430428.1"
                     /translation="MIEDKFMRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFS
                     VYMRICKGLSSVKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNE
                     TNLTLFDIDSHGEFKYKNSNNEEIQLNKKQEKYHQQNLFEF"
     gene            complement(11031..12221)
                     /locus_tag="RJ318_000534"
     CDS             complement(11031..12221)
                     /locus_tag="RJ318_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDV7430429.1"
                     /translation="MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKALKN
                     QPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSD
                     TLVPVENVRVENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTKLNYSEIALLAEL
                     GFFHIGVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFP
                     LLKDDEKATFSTLESALQSCDILITTGGVSMGDFDFLKKAVKEYEIIIDKADIKPGRH
                     IKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTP
                     YLEFVACNVEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEMLENESLVDI
                     IFMP"
     gene            complement(12225..12671)
                     /locus_tag="RJ318_000535"
     CDS             complement(12225..12671)
                     /locus_tag="RJ318_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HDV7430430.1"
                     /translation="MEHFTLYQGSLDIPKIYSQWYEFAKDKNCGALLTFCGIVREEGG
                     IEALSFDIYEPLLKKWFDEWQKRVDFDGISLLFAHSIGDVAVHESSYFAGILSKQRKL
                     GLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG"
     gene            complement(12672..12893)
                     /locus_tag="RJ318_000536"
     CDS             complement(12672..12893)
                     /locus_tag="RJ318_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HDV7430431.1"
                     /translation="MVKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAV
                     SLNDEIIFDENTKLKDGDKIALLPPVCGG"
     gene            complement(12895..14436)
                     /gene="cueO"
                     /locus_tag="RJ318_000537"
     CDS             complement(12895..14436)
                     /gene="cueO"
                     /locus_tag="RJ318_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HDV7430432.1"
                     /translation="MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTS
                     FINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKT
                     LFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAG
                     EERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMI
                     SDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPQIKLATNERIRIYNATAARYLN
                     LRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDK
                     MMVKEEPNTLFLANINLKKENIELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGK
                     SESELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFEL
                     ISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGN
                     LEVKE"
     gene            14560..15708
                     /gene="nspC"
                     /locus_tag="RJ318_000538"
     CDS             14560..15708
                     /gene="nspC"
                     /locus_tag="RJ318_000538"
                     /EC_number="4.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxynorspermidine decarboxylase"
                     /protein_id="HDV7430433.1"
                     /translation="MFYEKIQTPAYILEEDKLRKNCELLVSVGEKSGAKVLLALKGFA
                     FSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVF
                     NSLAQFHKFQAKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTI
                     EGLHFHALCEESAGALEAVLKVFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIAL
                     CKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIM
                     PYTSEVLNARILATRENEKISDLKESEFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKI
                     VFLDQIHYTIVKNTTFNGIRLPNLMLLNAKNELQMIREFSYKDYSLRN"
     gene            16012..16725
                     /locus_tag="RJ318_000539"
     CDS             16012..16725
                     /locus_tag="RJ318_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HDV7430434.1"
                     /translation="MGALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTM
                     QECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENS
                     NPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINK
                     SIDEFLGDVFMNKNANLYKEIASIASAFMEFERLCFEVEKPAKINSKKVQNDLSRSEF
                     LRREANKQRRTREKSQGIS"
     gene            16700..16891
                     /locus_tag="RJ318_000540"
     CDS             16700..16891
                     /locus_tag="RJ318_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HDV7430435.1"
                     /translation="MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKK
                     KEVLFQRSANWENYYIKAE"
     gene            16891..17433
                     /locus_tag="RJ318_000541"
     CDS             16891..17433
                     /locus_tag="RJ318_000541"
                     /inference="COORDINATES: protein motif:HMM:NF016750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HDV7430436.1"
                     /translation="MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELK
                     EAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMV
                     RSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKLNNEQAY
                     YIRKFAAFFGTNNVDHQARI"
     gene            17482..19695
                     /locus_tag="RJ318_000542"
     CDS             17482..19695
                     /locus_tag="RJ318_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002896872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HDV7430437.1"
                     /translation="MTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIV
                     VDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREE
                     AAKWTAEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQ
                     MVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYE
                     WLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQ
                     QVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQW
                     RFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRS
                     IGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTD
                     IEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQE
                     KEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDL
                     VQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYL
                     TRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHF
                     TGVMQGVDLTHNFPEGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK"
     gene            19692..20333
                     /locus_tag="RJ318_000543"
     CDS             19692..20333
                     /locus_tag="RJ318_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDV7430438.1"
                     /translation="MNKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIR
                     RRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCG
                     YCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVP
                     VCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL"
     gene            20330..21262
                     /locus_tag="RJ318_000544"
     CDS             20330..21262
                     /locus_tag="RJ318_000544"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HDV7430439.1"
                     /translation="MRKVFVTLLLSVVSLFAYGSERMGQDTQIWDFHRITNIPNYDTF
                     GKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHF
                     IAAISWVILVPTGFVMMFGATFGGGLFVRVCKNLHAFATVLFIISIIPMFLWWIKRML
                     PASYDIRWMMIVGGYLSKVKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDF
                     NSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYK
                     EEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI"
     gene            21429..22211
                     /gene="fdhD"
                     /locus_tag="RJ318_000545"
     CDS             21429..22211
                     /gene="fdhD"
                     /locus_tag="RJ318_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDV7430440.1"
                     /translation="MDPLFTTQILKYKGDESFTCNDTLVREIKLEIFINDEKVGALMA
                     TPVDEQALAIGYLMSENIIAKVSDIESIETKDDGMSVHIKAKIDKENLAKLNAEGVVI
                     SGCGRAHTANIDPEAIEASKISSDAKFSKDEILKQMSTFYTQCELYEKTGCVHTAKLF
                     VDEKTFFIGEDIAQHNTIDKALGKACLAGVDLSQCFLMVSGRLSSEMVAKAVMHKIPV
                     LVSRTAPTCLGVMIARKFDLTLCGFARENKINIYSGEFRIHG"
     gene            22204..22941
                     /locus_tag="RJ318_000546"
     CDS             22204..22941
                     /locus_tag="RJ318_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HDV7430441.1"
                     /translation="MDKNQEKEIISYMRELLNSNEKLDCGTAFKIAKKFNINIEKIGQ
                     LADENHMRIDNCELGQFGHLDFEKAKIEVLKKIEPSLDEKRRIFCKDARDIAKEGCGL
                     KSMRSALKTYKVDVKYCQLGCFKEKKGKQFIVRTKTWIENADGDLLFGRGKTELLELI
                     GQTGSLLHASKLMGINYKKAWMHLQTLQKNSQEILVSTRQGRSKESGTKLTPRAMELM
                     ENYSILQKDIEEYANKRFKELFLKGKK"
BASE COUNT         8087 a         3157 c         4005 g         7712 t
ORIGIN      
        1 aaaggagtca atcatgtcag ttacaaaaca attattacaa atgcaagcag atgctcatca
       61 tttatgggtt aaatttcata attatcactg gaatgtaaaa ggtttgcaat ttttttctat
      121 acacgagtac acagaaaaag cttatgaaga aatggcagaa ctttttgata gttgtgctga
      181 aagagtttta caacttggcg aaaaagctat cacttgccaa aaagttttaa tggaaaatgc
      241 aaaaagtcca aaagttgcaa aagattgctt tactccgctt gaagtcatag aactgatcaa
      301 acaagattat gaatatcttt tagcagaatt taaaaaactc aatgaagcag cagaaaaaga
      361 aagtgatact acaacagctg cttttgcaca agaaaatatc gcaaaatatg aaaaaagtct
      421 ttggatgata ggcgctactt tacaaggtgc ttgcaaaatg taatttaagg ggctttatgc
      481 cccaattata caaactaggt tataatatcc ttttttaaag gataaaattg aaagtactta
      541 atttttttta tgaaaaccac cctaaatttg aagtaagtta tgaaagaaaa aatcaaattt
      601 caaaaccaaa tattatcata aaaggcccac gattttgtgg taaaaaaaca cttattttta
      661 attttttatc tcaatttaaa gcaagtgaaa ttttgttttt agatttatat gatacacgct
      721 ttgaaaaaca aagtttagaa agacttgctg attttctgaa tgaaaattta caaattaaaa
      781 ttctttgcct ttataatttg gattttatcc ctaatttaga aaaaattaac attcccatca
      841 tcttaagtac aaatataaaa gatttaaatg taaatgggtt tgaagagctt gaacttgatt
      901 attttgattt tgaagaattt attagtgtaa gtaagaaaaa tttacctata aataatttag
      961 taggtctttt tttgcaaagt ggacgcagta aatttggaga aaaaaacata cttctaagac
     1021 aaagcttcac tcttttagaa ttagaaattt taaagtattt agctttaaat ttgggtcagc
     1081 aaatcagtat ttctaagata tttatagaac tcaaaaaaag attaaaaact tcaaaagata
     1141 gtgtttatca agctataaaa aaattagaaa atacttatgt gatttatacc ttaaaacatg
     1201 atgaaaaaaa acttcaaaag atttatttta aagattttgg cctaagaaat aatctttgta
     1261 tttcaaagga tttttcacat ttatttgaaa atttagtttt aagcgagttg tttaaattta
     1321 aagaagaatt tttttataac aaatacttta acttttatag ccaaatatct aaaattgctt
     1381 atatttcaag tccaacttta gatattgatt tgatcaagct acgtgctaag aaaattttac
     1441 caaaggcttt agaacttgga atttttcatg tgatttttat cactctttca agcgaggata
     1501 atttttttga acaaggggtt aaatttgaag tcatatcttt tgataaattt tcacttggat
     1561 tttaggtgtt gtttgagttt gtatcgtatt tttcaaggtt gtatcgtttg atgatttttg
     1621 taataagatt gatataatat cccttgcgtt cagaataaga atctaaagtt ttaatagcct
     1681 ctagccctgt tatctctttg ccttcgcttt caaatttagc tcttgcatcg cgaaactttt
     1741 cataagcaaa atgacgattt aaatttaaaa cataagagtc aacactatct tgcagactat
     1801 caaaaatttt aattttgtgt tttttatctg gatgtcttaa atcaggaatt aaacctttct
     1861 caccccaagt ccattctcca aaaagattgt ttgcttctct tgcgaagcga ctggtacctg
     1921 tagcactttc aactaaagct tgggctatac ccatggattt tggaattttt tgaatacgtt
     1981 ttttatattc tgcaaaatca taaagatttt caatgcgata tttgtttttt atcgtgataa
     2041 gtttttcaag atttatttgg tttgaagtcc taaagcctgt tttgtaagca tctttaaaaa
     2101 aggcttcgat aaaagctctt tcttgttcaa tttttttaaa gctttgatca aacatttcat
     2161 tcatttttat aaaaaaaatt tgtctttttt gatctatatc aagtttgtaa tattcttctc
     2221 caaatccact ctttagatca tcagcaaaaa gtgggattag aaaaagacta aaaaaaatta
     2281 taattggctt caaaacaata ctttaccttt ccttcaaaaa acaattcttc atttttatat
     2341 gcaaacccta cctcttcacc acttttagga gttattttaa ctttattttg tactttttta
     2401 tttaaaaatg ccagataaaa acaagccccc attcctgtgc cacaagctaa ggtttcatct
     2461 tcaactccgc gttcataggt gcgaactttt aaatgatttt catctaaaat ttttacaaaa
     2521 ttaacattgg cattatattt ttgtctcatt ttttgacaaa gcattgtatc aaattcatct
     2581 aaattttgac aaaaatgtac tagatgtgga actccagtgt tgcaaagttg ccaagttttt
     2641 cctaattctt caaaagtatt ttgcacgctt tttattttgc ctaaagatac ttcaacttta
     2701 tcttgattta cctttgcttt tattattcct gcaccggtta aaaaactcat gttaggattt
     2761 attttgttaa tatgatgtgc aaaatgtgcc gcagcccttg agccattgcc acacatagca
     2821 gcccttgagc catcgttatt ataaaattcc cattcaaagt cgtatttttc atgaggcaat
     2881 attacgataa agccatccgc acctataccc tcataacgat tacaaagttc tttagctaaa
     2941 gcacttctat cttcttttct atcagcattt gttatgacaa aatcattccc acttgcacaa
     3001 tatttataaa atttcacatg tttcctttag aaatttcttg tattacttta acacattctt
     3061 gcctaaaatc ggcataagaa ttagtatttt taatgataaa atctgctttt ttaagttttt
     3121 cttcaatatc tatttgagaa tcaagtcttg cttttgcagc ttctaagcta agcttatctc
     3181 tttgcatgat tcttttaagg cttaattctt taggtgtgta aattacaatg actttgccta
     3241 aattttcata agcaccgctt tcaaaaaaaa gaggaatttc tacaaaaaaa gctttatttt
     3301 ctttatctag aatttgcatt tgttctaaaa ttttagctcg aattttagga tgagtgaaat
     3361 tttctaagat ttttttagct tctttattgt taaaaacaat ttctccaagg atttttctat
     3421 cgattttctt ttcttttttg agtaaatttt ttaaactaaa gggagaaaaa atcttttcaa
     3481 gttctaaagc attttcatct aaaattttat gagcgatttt gtctgcgcta atgcttttaa
     3541 agcctaaaga attcgctatt tctataaaag tgcttttacc acaagcaatt gaagcggtta
     3601 caaaaaaagc atttttcatc ttatgcctta ttaaaacttt tttcgttaaa ataccttttt
     3661 agttcttaaa ggaaaataaa tgaaaatttc atatgaagat gcaggcgtaa gtatagataa
     3721 tggaaatacc tttgtagagg ctataaaacc tttggttaaa gaaactttta atgataatgt
     3781 tgtaggtgga attggttctt ttgctggtgc ttttagaatg ccaagtggtt ttaaaaagcc
     3841 tgtgatttta ggtgcaacag atggggttgg taccaagctt cgcttggcaa ttgatgctaa
     3901 aaaatatgat actatagggc aagatttagt agcaatgtgc gtgaatgatt tgatttgtaa
     3961 ttttgctacg cctttgtttt tcctagatta ttatgctaca gccaagctcg aagtagaagt
     4021 agcaaaggct gttgtatcag gcattgccaa gggatgtaag atggcaaatt gtgcattaat
     4081 tggcggagaa actgctgaaa tgcctggaat gtatgcaaaa gatgattttg atcttgcggg
     4141 ttttgcagtg ggtatggctg aagaagatga gattgataga agtaaatttg ttaaaaatgg
     4201 tgatatttta ttggcacttt ctagttcagg acttcattca aatggttatt ctttagctag
     4261 aaaagtactt tttgaaagtt taaaattaaa atttgatgac aagatagagg gtaaaaattt
     4321 aattgatatt ttgttagaac ctacaaggat ttatgtgcgt gattttctta cactaaagcc
     4381 ttatatcagt gctctagcac atattacagg gggtggttta gtagaaaatt taccacgcgt
     4441 tttacctcgt ggtatgggtg caactatacg caaacatcat cttaaaactc ctgaaatttt
     4501 ttatactata ggacaggctg tagaagaaag cgaaatgtat agaagcttta acatgggagt
     4561 gggtttagta atggttgtag atccttctaa tgtaagtaag attttagaaa attcagatgc
     4621 ctttattatc ggcgaaattt gcattaatga aggtattgtt ttagaatgaa aataaagcgt
     4681 taatacgctt tatttttgta ttttaagttc tatttttgta gtgttttgtt cttttggcaa
     4741 aggattggtt tgtgctagat aaaaggctac aagtacattt acaagcatag cgataagtaa
     4801 aagaggagtg gttcgtttta taatatccat tggagctact tttgcaaatc cagctaaagc
     4861 tatgattccg cctgctattg gtgaagctgc acgacctaaa caagatgcaa tttctatagg
     4921 taaaactaga gtaataggtg caacgcctaa ttttgtagct atatcaggag ctagttttcc
     4981 aaaagtatta aaagcggcaa ttccacttcc cataatcact gtggcaaaat aaactaaaaa
     5041 gcttaaaata gctatactca aaagaattcc aaaccatgca aaatttcctg ttccaagatt
     5101 tgaaaccgcg ttagcaagga tattaactcc accaagtgct ttaatgcctt cagcaaatac
     5161 tccagcggcg atgattatgc ttacgactga gataaaaatt tcagccatag cttttaaaat
     5221 caccatcata tcttcgccta attttctagc atttctgtgt cttgcaaatt caacaagaaa
     5281 aactaaagaa atgcttacaa aatttgctgt tacaacatcg agcttgatag taaaaaaata
     5341 cgctataaat aaaaatacaa caggtaacca aggaaagagt atgtaaaaaa gtaaggcatt
     5401 taggatcaat gatttgcgga atttcaactt catcatttaa aacacctttt tctttatctc
     5461 ttttatcaat ccaagtagaa taaaaaggaa tcaagatggc aattaactac aacataagta
     5521 atcacactat aaatttgata atttaaagaa agtcctacga cattatcact ttgtcctacc
     5581 atatccgcca tattgattga atttccatct tttggaccat aatcaagcgc aattaaagaa
     5641 agcacacata cagctgtaat aggacggatt ttaagtgaga ttaaaacagg ataaatacat
     5701 gctaacaaaa gcaatccagc atagctagaa atgacgattt ttaaagccat tccaacaaca
     5761 aaagttccac ttaaaattaa gtatttattt tttgattttt cctgagggtt tatttgctaa
     5821 aaaagcaagt tttgccgaag cattgatatg tttcatgtaa gcagtaaagc ctgccacact
     5881 catgataata aaccctactc cagaaagctg acttttaaaa atcgctgtga taaaagataa
     5941 ctatcaagta aaacatttaa aaagcttgta tgctctctgc ttggggcttt tggtataggt
     6001 gttcctgtga tgtaaaaagc aaaaataagc aagataatat ttgaaagaaa aatacaaaaa
     6061 tgagattata ttttagtata taataagcaa cgacaattac cgctaaaagt gtagaacata
     6121 tcataaaaat tggcatgatt tctcctaaag ttattattag cttttatttt agctaaaatt
     6181 taactaataa atatttttca tttaaaattt tacttatttt ttgcattata aaattaataa
     6241 tatgtatagt ttggttactg aaaagtttat gtttgtttaa aaaaatgatt tttgtattat
     6301 aattatacac aaatcataaa tattaaaaag gatctagtgt ggcaagaatt ttggcatttg
     6361 atataggaat aagctctatt ggctgggcat ttagtgaaaa tgatgagtta aaagattgtg
     6421 gagttaggat ttttacaaag gttgaaaatc ccaaaacagg agaatcctta gccttgccaa
     6481 gacgccttgc aagaagtgct agaaaacgcc ttgctagacg caaagcaagg ctaaatcact
     6541 taaaacattt aatcgcaaat gaatttaagt taaattacga agattatcaa agctttgatg
     6601 aaagtttagc caaggcttat aaaggatctt taattagccc ttatgagtta agatttagag
     6661 ctttaaacga gcttttaagt aagcaagatt ttgcaagagt gattttacat attgcaaaaa
     6721 ggcgtggcta tgatgatatt aaaaatagtg atgataaaga aaaaggtgcg attttaaaag
     6781 ctatcaagca aaatgaagaa aaactagcaa attatcaaag tgtgggcgag tatctttata
     6841 aagagtattt tcaaaaattc aaagaaaatt ccaaagaatt tacaaatgtt agaaataaaa
     6901 aagaaagtta tgaacgctgc atagcgcaaa gttttttaaa agatgaatta aagcttattt
     6961 ttaaaaaaca aagagaattt ggcttttctt tttcaaaaaa atttgaagaa gaggtgctta
     7021 gtgtagcatt ttataaaagg gctttaaaag atttttctca tttggtggga aattgtagtt
     7081 tttttaccga tgaaaaaaga gcgccaaaaa attcgccctt agcttttatg tttgtagcac
     7141 ttacaagaat tatcaatctt ttaaacaatc ttaaaaatac tgaaggaatt ttatatacaa
     7201 aagatgattt aaacgccctt ttaaatgaag ttttaaaaaa cggcactcta acttataaac
     7261 aaacaaaaaa gcttttgggc ttaagcgatg attatgaatt taaaggagaa aaaggaactt
     7321 attttattga gtttaaaaaa tacaaagaat ttataaaagc cctaggtgag cataatttaa
     7381 gccaagatga tttaaatgaa atagcaaaag atattaccct tataaaagat gagattaaac
     7441 ttaaaaaggc tttagcaaaa tatgatttaa atcaaaatca aattgatagt ttaagcaaat
     7501 tggaatttaa agaccattta aatataagtt ttaaagcctt aaaacttatc actcctttaa
     7561 tgcttgaagg taaaaaatac gatgaagctt gcaatgagct taatttaaaa gtagcaatca
     7621 atgaagataa aaaagatttt ttacccgcat ttaatgaaac ttattacaaa gatgaagtaa
     7681 ctaatcctgt ggttttaagg gcgattaaag aatatagaaa ggtcttaaat gccttactta
     7741 aaaaatacgg taaagtgcat aaaataaaca ttgaattagc aagagaagta ggtaaaaatc
     7801 acagccaaag agctaaaata gaaaaagagc aaaacgaaaa ctacaaggcc aaaaaagacg
     7861 ccgaacttga atgtgaaaaa ctaggcttaa aaataaatag caaaaatatt ttaaaattaa
     7921 gattatttaa agaacaaaaa gaattttgtg cttatagtgg agaaaagatt aaaattagtg
     7981 atttgcaaga tgaaaaaatg cttgaaattg atcacattta cccttattct agaagttttg
     8041 atgattctta tatgaataaa gttttagttt ttaccaagca aaatcaagaa aaacttaata
     8101 aaaccccctt tgaagccttt ggcaatgata gtgcaaaatg gcagaaaatt gaagttttag
     8161 caaaaaattt acctactaaa aagcaaaaaa gaattttaga taaaaattac aaagacaaag
     8221 agcaaaaaga ctttaaagat agaaatctaa acgatactcg ctacatcgca aggcttgttt
     8281 taaactacac taaagattat ttagattttt tacctttaag cgatgatgaa aatacaaagt
     8341 taaacgacac acaaaaaggc tcaaaagtgc atgtagaagc aaaaagcggt atgcttacat
     8401 cggctttaag acacacttgg ggctttagca ctaaggatag aaataaccat cttcatcacg
     8461 ccatcgatgc agtaattatt gcttatgcaa acaactctat cgtaaaggct ttttcagatt
     8521 ttaaaaaaga gcaagaaagc aacagtgcag aactttatgc aaaaaaaatt agtgaattag
     8581 attataaaaa caaaaggaag ttttttgagc cttttagtgg ttttaggcaa aaggttttag
     8641 ataaaattga tgaaattttt gtctcaaaac ctgagagaaa aaagccaagt ggagctttac
     8701 atgaagaaac atttagaaaa gaagaagaat tctatcaatc atacggcgga aaagaaggag
     8761 ttttaaaagc cctagagctt ggtaaaatcc gcaaagtaaa tggtaaaata gttaaaaatg
     8821 gcgatatgtt tagagtggat atttttaaac acaaaaagac aaataaattt tatgctgtgc
     8881 caatttatac tatggatttt gctttaaaag tattaccaaa taaagctgta gcacgaagta
     8941 aaaaaggtga gataaaagac tggattttaa tggatgaaaa ttatgagttt tgcttttctt
     9001 tatacaaaga tagtttgatt ttaattcaaa ctaaagatat gcaagagcca gaatttgttt
     9061 attataatgc ttttacaagc tctactgtta gtttgattgt ttcaaaacac gataataaat
     9121 ttgaaacgct aagcaaaaat caaaaaatat tgtttaaaaa tgcaaatgaa aaagaagtaa
     9181 tcgcaaaaag cataggaatt caaaatctaa aagtatttga aaaatacata gtttcagcac
     9241 ttggggaagt tacaaaggct gagtttagac aaagagaaga ttttaaaaaa tgagttacga
     9301 tgaagctttt aaaacactgc ttattagctc taatgccaag ctaaatttag agctaaatca
     9361 tcttgtgatt aagcaagatg aaaatatagc caaattgttt ttaaaagata taaatatcat
     9421 cgttttagaa agcttacaaa taagcattag ttccgcactt tttaatgcct ttgcaaagta
     9481 taaaattatc ttattaacct gcgatgaaac tcatagtata aatggcgttt ttactccttt
     9541 tttagggcat tttcaaagtg caaaaatcgc aaaagagcaa atgaatgtaa gtgctcaaaa
     9601 aaaggctatt ttatggcaaa aaatcattaa aaataaaatc ctaaatcaag cctttatctt
     9661 aaaaaaacac aataaaatag agcaaagcaa tgagcttata aatttggcta aaaaagtaag
     9721 cttaaatgat agtaaaaata ttgaagctgt tgcggcagcg ctttatttta aaactttgtt
     9781 tagtgtttct ttttcaagag atgagctttg ttttgaaaat tctgctttaa attatggcta
     9841 tgcaatcatt agggcttgta ttattagagc agtttgcata agtgggcttt tgccttggct
     9901 tggcataaag cacgataata tttataattc ttttgcgctt tgcgatgatt tgatagaagt
     9961 gtttagggct agtgttgatg attgtgtttt aaagcttaag ggtgaaagtg agtttttaag
    10021 caaagatgac aaaagagcgt taattagcaa tttacaaagc aaaatcaatt ttaatgggca
    10081 aaattatcct ttaaatagag cgataaatca ttatgtggcg aattttaaaa atgctttatt
    10141 gtatgaagat gaactaaaga tagtaaaatt tgatgattga agataaattt atgcgcgtgc
    10201 ttttgatgtt tgatgtgcct actaaaagta aaaaagagca aaaactagca agtaaattta
    10261 gaaacaatct tataaaatta ggttatttta tgttgcaatt tagcgtttat atgcgtattt
    10321 gcaagggttt aagttctgta aaaagttcta ttgaaaatgt aaaaaagatt ttgccacctt
    10381 atggaaatgt aagggcttta atcatcactg aaaagcagtt tgataaaatg gagcttttgc
    10441 ttggtggcat agtttttaat gaaaaagtta ataacgaaac taatttaacg ctttttgata
    10501 tagatagtca tggagaattt aaatacaaaa attcaaataa tgaagaaata caactaaaca
    10561 aaaaacaaga aaaatatcat cagcaaaatt tatttgaatt ttaaaagcgg ttttagggga
    10621 ttgtaacccc gcagagtccc gcaaactctt tattttagtc cctttttaaa tttcttattg
    10681 agattatagc ataatttttg ctatttttca tcaaaaaacc ccgaaatttt cattatctgg
    10741 taaatatcta ttttaccata aagaaattta aaaagggact aaaactgtat aagcttgtgc
    10801 tgtagtaatt tcaatatttt accataaaga aatttaaaaa gggactaaaa cgtcattttt
    10861 aatccttaag taagtaataa tattttacca taaagaaaat taaaaaggga ctaaccctag
    10921 tggattgaaa ctctgctagg gctaattact ccactaaaag gaggttgcaa atttgaaact
    10981 tattgaaatt tagggttgat taaaatcgaa ataaaattat ttaaataatt ttaaggcata
    11041 aagataatat ccactaaact ttcattttct aacatttcac attcttttgg taccaccata
    11101 agggcagctt tattgttaag attatttata atcgcactag agccttcttt cttaccttca
    11161 agattggcta aaatgcgtcc atttttaaat tccacattac aagcgacaaa ttccaaataa
    11221 ggtgtttttt tcttgtagct tccttgtaaa aaggctttgc aaatatagtc tttaggctga
    11281 agtaaccaag agtttaaaat ctctcttgcg taaagattaa acattaccat agccgagtaa
    11341 ggaaaacctg gtaaggcgat gatgaatttt tcattagcct tggctatttt gatatgtcta
    11401 cctggtttta tgtcggcttt atcgatgatg atttcgtatt cttttacagc tttttttaaa
    11461 aagtcaaaat ctcccataga aactccgcct gttgtaatca aaatatcaca actttgcaaa
    11521 gcactttcaa gggtagaaaa agtggctttt tcatcatctt ttaaaagtgg aaaaaccctt
    11581 gtatcgcaat ttaaattttt agctaaatta gctatggcga tatgatttga agagcggatt
    11641 tgagcaggat tttccaaggc ttctcctaga tctttgatct cacttccgct acttaaaacc
    11701 cctacaatag gctttataaa cacaccaatg tgaaaaaatc caagttcagc caaaagagct
    11761 atctcgctat aatttaactt tgtgcctttt ttgagcaaaa tttcatcttt tttatagttt
    11821 tctcctactg cacgcacggc aaaagcttgg ggaacttttt tttctataaa aagagtatca
    11881 ttttctacgc gtacattttc aacagggact aaagtatcac ttccctcgct catgagtgag
    11941 cccgtaaagg tttttacaca agtaccattt tgcacgctaa attgtggcat agtgcctgca
    12001 ggtgtgaggc ctaaaatttt taaaggctta tcttgatctt caaatttgat cgcataacca
    12061 tccatagccg aagttggaaa ttcaggctga tttttaaggg cttttatgtc ttgagctaaa
    12121 atgcgtccta aacactctgt aagagctatt ttttcaatct tttcataggt tttgatatga
    12181 gagtgtaaaa tttttaaact ttcttcataa gacattaaca ttttttatcc ttttaaaagt
    12241 cctgcaccgc aaagtttggt tgatctttct ttggcataaa ttctttcttt gtttatcaca
    12301 tcatacttcc aaataggtgc acttgcttta aaatcttcaa caaattcatt aagaagttta
    12361 agtcctaatt ttctttgttt gcttaaaatt cctgcaaaat aagagctttc atgaaccgcc
    12421 acatcgccta tagagtgagc aaaaagcaag ctaataccat caaaatctac tcttttttgc
    12481 cactcatcaa accatttttt taaaagcggc tcataaatat caaaactaag tgcctcaatg
    12541 cctccttctt cacgcacaat accacaaaaa gtcagcaaag caccgcagtt tttatccttg
    12601 gcaaattcat accattggct ataaatttta ggaatatcta aagaaccttg atagagtgta
    12661 aaatgttcca tttaaccccc acaaactggc ggtaaaagtg ctattttatc accatctttt
    12721 aacttagtgt tttcatcaaa aatgatttca tcgtttaaag atacggcaca aagttctagc
    12781 cattctttta aactctcatc tttttgcaaa atttctttta attcttttaa attttttacc
    12841 tcaagctcta aattttcttt atttatgggg cctaaaaatt ccacttttac cattttattc
    12901 ctttacttct aaatttccca tcattcctaa atcttcatgt tctaaaatat ggcaatgata
    12961 cattctaagt cctttaaaat cttgtttcat tctaagtctt aactcttcat taggacgcac
    13021 atttatagta tctcttaagg ctctaaattc ggctttttga actttgccat tgagttttga
    13081 tgagatgagt tcaaattgcg tgccgtgtat gtggaaagga tgatccatgt gagatttatt
    13141 tatcactatc cagtcttcaa ctactccaag tttggagctt aaatcaatgc gttttaaatc
    13201 atagcttttg ccattgatta aaaacataga cgcaagagcg atttttaatt cgctttcact
    13261 ttttcccatc ataccatgca tttgcatatg atcttcactc atgattattt ctttaaattc
    13321 cttaggttct tctgaaggtt tgaaaatttt taaatttttt ggaagttcta tattttcttt
    13381 ttttaggtta atattggcta gaaatagggt attaggttct tcttttacca tcattttatc
    13441 cctatcataa taagcacttt ctagcttaaa attcccatct tttggagcgt cgattaaaac
    13501 ttctacgcga gaagcaggac ttaagaaaag ttcttcttta taaatagttt tttctataag
    13561 tccaccatca gtaccaacaa gtataaactt agctccttgt atgcgtaaat ttaaatatct
    13621 tgccgcagta gcattataaa tgcgtatgcg ttcgtttgtg gcgagtttga tttgaggttt
    13681 aaattgtcca ttgatgagta caaattctcc ttctctacca tttagccaat catttaggtt
    13741 gttgttcgga atttgagcgt tttcatcaag acgcaaatcg ctaatcatca aatctttttc
    13801 ttttaaatga cttaaagcat ctttttttgc tttgatcaca aaagcccctg ctaaacccat
    13861 aaaaacttgt ttagaagccg tataatgagg atgcggatga taccagtaag ttcctgcgct
    13921 atcttgagga atttcaaaac gatatattct ttcttctcct gctaagatag gatcatgtgg
    13981 gcttccatct tgatcaggtg gcacaggaac gccatgccaa tgtatagttg tagcttcctt
    14041 gagtttgttt ttgactaaaa tttcaagttt atctccttca aaaacttcta tttttggagc
    14101 aggtactaga ccattgtaag tataaaataa ggttttttta cctttgataa gctctatatg
    14161 attttctttg atttctaggg tagcacgaaa aatatttttt tctttacttt catttttgag
    14221 caaaggcaag gcttttaaaa tttctccttg ggggaattgt tttggatcta aaagctttaa
    14281 attttttgga gcaaagttta taaaagaagt atctaagtca tgatttatag aatgattttt
    14341 atgcatggag tgcatatcgt gcataggatt tgcataggct acacccatac ttgctagagt
    14401 gagtgcatta aattttaaaa aatttcttct attcattagt ttttcctttt gcttgatttt
    14461 ttgtattata gtcattattt ttttaacttt agtaaatatt tattttgaaa atttggttta
    14521 attttgttat gattttagca atttaatcaa ggaaaaataa tgttttatga aaaaattcaa
    14581 accccagctt atattttaga agaagataaa ttaagaaaaa attgtgagct tttagtaagt
    14641 gttggcgaaa aaagtggtgc taaagtgctt ttagctttaa aaggttttgc tttttcagga
    14701 gcgatgaaaa ttgttggaga atacttaaaa ggttgtactt gtagcggact ttgggaagca
    14761 aaatttgcta aagaatacat ggataaagaa attcatactt attcgcctgc ttttaaagaa
    14821 gatgaaatag gtgaaatagc cagcttatct catcatatag tgtttaactc tttagctcaa
    14881 tttcataaat ttcaagctaa aacacaaaaa aattccttag gtcttcgttg taatgttgaa
    14941 ttttctctag ccccaaaaga actttacaat ccttgtggaa gatactcaag acttggaatt
    15001 cgtgctaaag attttgaaaa tgtggattta agtaccatag aaggacttca ttttcacgca
    15061 ctttgcgaag aaagtgctgg tgctttagaa gctgttttaa aggtttttga agagaaattt
    15121 ggcaaatgga tagggcaaat gaaatgggtg aattttggag gaggacatca catcactaaa
    15181 aaaggctatg atgttgaaaa gcttattgct ttgtgtaaaa atttcagtga taaatacggt
    15241 gtgcaagttt atcttgaacc aggcgaagcg gtgggttggc aaacaggaaa tttggtggct
    15301 agtgtagtag atatcataga aaatgaaaaa caaattgcta ttttagatac ttcaagcgaa
    15361 gcgcatatgc cagatactat catcatgcct tatacaagtg aagttttaaa tgctagaatt
    15421 ttagccacaa gagaaaatga aaaaatttca gacttaaaag aaagcgaatt ttcctatttg
    15481 cttactggaa atacttgttt agcgggtgat gtaatgggag aatacgcctt tgataaaaag
    15541 cttaaaatcg gcgataaaat tgttttttta gatcaaattc attacaccat tgtgaaaaac
    15601 acaactttta atggtataag acttccaaat ctcatgcttt taaatgcaaa aaatgaactt
    15661 caaatgataa gagaattttc ttataaggat tattctttaa gaaattagta ttatttataa
    15721 tttgcataaa atgttaattt tactcggaag agaatcaaag atgtaaattt tatgcaaagt
    15781 attttatttt ttcaaatata aaatcaactc aaatatctaa ttttcaatac ttttgtatga
    15841 ttttttaata ttttaaatcc ttgtggaatt ttattgaaat tcagtgattt ttaaatcaaa
    15901 tagtattaag ataaatcgat ttaaaaatcg gctttaaaat gaatattagg tatattttgc
    15961 ataatattca ttcaagcaaa atttaaagct atttttgaaa attttgaatg catgggagct
    16021 ttaatggatt tggaaaaatt aagattagct agaagtcttt attatcaatg tctaggagag
    16081 ctttttgttt tttcattttc tgaagaaaga ttgtcaaaat tacaagagta tttaaagaca
    16141 atgcaagaat gtttatttga tgaaaattta aaatcaaatt ttgatatctt gcttaagcat
    16201 ttagatgatg aaaattctat acaagcattt tttaaagaat atgatttgct ttttttaagt
    16261 cttaaaaata gcattccaac gactttttct tacatagaag aaggttttga aaattcaaat
    16321 cctttacttt gcgtgcgtca aattttagtc aaaagtaaaa taagacgcaa tgaaaaattt
    16381 tttaaagaaa gtgaagatag tgttggattt tgtttattgt tgatgagtga atttttaagg
    16441 caaaatgaag atgatttagc caaagagctt tttgaaaaag tgatcaataa aagcattgat
    16501 gagtttttag gcgatgtttt catgaataaa aatgcgaatt tatataagga aattgcaagt
    16561 attgcatcgg cttttatgga atttgaaaga ctttgctttg aagtggaaaa acctgcaaaa
    16621 ataaattcta aaaaagtgca aaacgatcta tcgcgttcag aatttttaag aagagaagca
    16681 aataaacaaa ggaggactcg tgaaaaatcg cagggaattt cttaaaaaat ccgcttttgc
    16741 cttaggggct gctggagtgc ttggtagcac aactttagct ctagctaaag atgaagaaag
    16801 aaaagattta gttaaaggta aaagtaagaa aaaagaagtg ctttttcaaa gaagtgctaa
    16861 ttgggaaaat tattatataa aggctgagta atgtcaagtg taggtgaaaa tatcaagctt
    16921 acgcgtcgtt cttttcttaa aatggcagca ctttcaagcc tagcaacacc gttgcttgct
    16981 agaagtgaaa ctttaagaga agcgagtgct gatgagctta aagaagctta tgaaggtagt
    17041 aaaaaagtaa aaacagtttg tacagcctgt tctgtaggct gtgggattat tgcagaagtg
    17101 caaaatggtg tttgggtgcg tcaagaaatc gctcaagatc atcctgtgag ttcaggtgga
    17161 cattgctgca agggatctga tatgatcgat atggtgcgtt cacatgtgcg tttaaaatat
    17221 cctatgaaaa aagaaaatgg agaatggaaa cgcataagtt atgagcaagc tttaagtgag
    17281 atcggagaaa aactagctgc ttatcgtaaa gaaaatcctg aaagtgttat gtttttaggt
    17341 tctgcaaaac ttaataatga acaagcttat tatataagaa aatttgcagc attttttgga
    17401 acgaacaatg tagatcatca agctagaatt tgacacagcg caacagtcgc cggtgtggcg
    17461 aatacatttg gttatggcgc tatgacaaac catcttggag acatccaaag aagtaaatgt
    17521 atcattatca ttggagcaaa tccagcggta aatcaccctg tgggttttag acatttctta
    17581 aaagcaaaag aaaaaggtgc aaagcttatc gttgtagatc ctagatttac aaaaagtgca
    17641 gcaaaagcgg atatttatgc aagaattcgt ccaggaactg acattgcttt catgtatgga
    17701 atgttaaaaa tcatttttga tgaaggcttg gaagatacaa aatatcttga tgaaagagtt
    17761 tttggaattg ataaaattcg cgaagaagca gcaaaatgga cagctgaaga agtagaaaat
    17821 gttacgggaa tttctaaaga acttttggtg caaatcactc acgaagtagc taaaaacaaa
    17881 ccaactacgc ttatttgggc tatgggttta actcaacata ctgtaggaac ttcaaataca
    17941 cgtttagcac ctattgtgca aatggtactt ggaaatatag gtaaatttgg tggcggagtt
    18001 aatatcttac gcggacacga taatgttcaa ggtgcttcgg atatggcttg tttgagtgaa
    18061 aatttacctg gttattatcc tttaaatgaa gcgacttgga gatactatgc caaaatttgg
    18121 ggtgtggatt atgagtggct tttaggaaat tttgtaagta aagattggat gcataaaacc
    18181 ggactttcac ttgctagatg gtgggcagca gctttaaatg gaaaagatgg aaatgatgct
    18241 atcgataatg caggaacgcc tttaaaagct ttagtagtta tgggaaatgg tatcacttca
    18301 actgcacaac aagtaaaagt taaagaaggt ttggaagctt tagagctttt agttttggct
    18361 gatccttttg taaatgaagc aggcattatc gcagaaagaa aagatgggat ttatctttta
    18421 cctgcagcaa cacagtttga aacaagcgga agtgtaacag caacaaatcg tagcggacaa
    18481 tggagattta aagttgtaga tccactttat gaaagcatgg aagatcaaga aattttattt
    18541 gagcttgcta aaaaattagg cttttatgaa gactttacta agactttacg cgatgaaaaa
    18601 ggtgagattg tttggcctga aaatgcaaca agagaaattg caaaagcagt cagaagtata
    18661 gggcttaatg gttggagtcc tgaaaggctt aaaaagcata ctttatactg ggataaattt
    18721 gatgaggtaa ctttagaagg aaaagacgaa gttgcgggcg agtattacgg gcttccttgg
    18781 ccttgttgga gtgataagca cccaggttct cctgtacttt ataataccga cattgaagta
    18841 gcaaaaggtg gtatgggctt tagaaataat tttggacttg agtatgaagg agagagttta
    18901 cttgctaaaa atgcgccttt aaattcacct attgatacag gttatccaca aattactaaa
    18961 gataatatag aaaaagtttt aggtattact ttaagtgccc aagaaaaaga aaaaatggga
    19021 tcaacttggt cttatgatga tagcaatatc atagcaacta aatgtataga aaaaggcata
    19081 gttccttatg gaaatgctaa agctagagct gtagtttgga cttttaaaga taaaattcca
    19141 ctccaccgtg agcctttaca ttctccaaga aacgatttgg tgcaaaaata tccaagtttt
    19201 gaagatcaaa aagcacttta tcgcgtggat actaaatttg tttctgtgca acaagctaag
    19261 gattattcta aagaattccc acttaatctt gttactgcaa gacttgtgaa tttaaatggt
    19321 gcaggtatgg aaaatagagc atctatgtat ctaacgcgtt taacacctga aatgttttgt
    19381 gagatcaatc ctgaattagc aaaagagcaa gacattaaag caggagatat gatttgggta
    19441 cattctccag aaggtactaa aattcatgta agagtgaagg ttaatccagg tgtagcaaaa
    19501 gatatgattt tcttgccttt ccattttaca ggagttatgc aaggcgtgga tttaacgcac
    19561 aatttcccag aaggaactaa gccttatgca agcggagaaa gtgctaatac ggtaacaaat
    19621 tatggttatg atatcatgtg tcagattcca gagactaaag gtgggctttg tagaatcagt
    19681 aaggatggaa aatgaataag gtaaattttg caaatttaga aaaagaacgc ttgaaattct
    19741 tttgtgataa tgagcgttgt attgattgta atggttgtgc ggtagcttgt gatgaagcac
    19801 atgagcttcc tattcatatt cgccgccgcc gtgtgattac tttaaatgaa ggaattcaag
    19861 gaaaagaagt ttcaacttct atttcttgta tgcattgtga tgatgctcct tgttctatcg
    19921 tttgtcctgt ggattgtttt tacatccgtg ctgatggtat tgttttgcat gataaagaaa
    19981 tttgcatagg ttgtggatat tgtctttatg cttgtccttt tggtgcacca caatttccaa
    20041 aagatagtgt ttttggaaat aaaggcatta tggataaatg tactatgtgt gcaggtggcc
    20101 ctgaagcaac gaattcagaa aaagaaagag aactttatgg tcaaaatcgt atcgcagaag
    20161 gaaaagttcc tgtatgtgct gcgatgtgtt cgacaaaagc acttttagta ggtgaaagtt
    20221 ctaaaataga agagatttat cataatagac ttatgaatag aaattatggc attccaaatc
    20281 cttcggaaag tttggaatgg aagattgctt acacaggaaa ggaacgctta tgagaaaagt
    20341 atttgtaacg cttttattaa gcgtagtgag tttatttgct tatggtagcg agagaatggg
    20401 acaagatact caaatttggg attttcatcg tattacaaat atcccaaatt atgatacttt
    20461 tggcaaactt tggacaactt tgcaaggtga atatatagct actatagctt taatcgctgt
    20521 tattgcggta ttatctgcat ttgctttgca ttatatggtt ataggaccta agcaattttc
    20581 acacgatgga aagaaaattt atgcttttac attatttgaa agactttttc attttatcgc
    20641 ggcaatttct tgggtgattt tagtgccaac tggttttgtg atgatgtttg gggcgacttt
    20701 tggaggcgga ctttttgtaa gggtttgtaa aaatttacat gcttttgcaa cggttttatt
    20761 tatcatctct ataatcccta tgtttttatg gtggattaaa agaatgcttc ctgcaagtta
    20821 tgatatcaga tggatgatga tagtaggtgg ttatttaagc aaagtaaaac gtcctgtacc
    20881 tgcaggtaag tttaattttg gtcaaaaatc ttggtattat atagctgtat ttggtggatt
    20941 tttgatgata attacaggtg gatttatgta ttttcttgat tttaattcca cggcaattca
    21001 aggtcttttt ggtttaactc aaattgaact tttaagaatt tcagctatag tgcataattt
    21061 cttgggtata gtgtgtgcag tgttttttgg tgtgcatatt tatatggcag tatttgcaat
    21121 caaaggcagt atccattcta tgattagtgg ttataaagaa gaagaagagg tttatatttt
    21181 acattcttat tggtataaag aattaagcaa taaaaagcaa attgaaccta gtttttctta
    21241 tgatcctaat gtaaaaattt aatctttaac cgctatgtta ttgcatagcg gtagttttaa
    21301 gcttttttga aataaataga acgaatttta ttttacaagt tgaatctaaa atctattttt
    21361 ccatatataa atttgttatt tatgtttttt tgatataata ttatttaaag atatttaaag
    21421 gataaggtat ggatccgtta tttacaactc aaattttaaa atataaaggt gatgaatctt
    21481 ttacatgcaa tgatacttta gtgcgtgaaa ttaagcttga aatttttatt aatgatgaaa
    21541 aagtaggtgc tttaatggca actcctgtag atgaacaggc attagcaata ggatatttaa
    21601 tgagtgaaaa tatcattgcg aaagtaagcg atattgagag catagaaaca aaagatgatg
    21661 gtatgagtgt gcatattaaa gcaaagattg ataaagaaaa tttagcaaag cttaatgctg
    21721 aaggtgtagt tataagtggt tgcggtagag cacatactgc caatatcgat ccagaagcta
    21781 ttgaagcgag taaaattagt tctgatgcaa aatttagcaa agatgaaatt ttaaaacaaa
    21841 tgagtacttt ttatactcaa tgcgagcttt atgagaaaac aggctgtgta catacggcta
    21901 agctttttgt agatgagaaa acttttttta taggtgaaga tatagctcag cataatacca
    21961 tagataaagc tttaggaaaa gcgtgtttag ctggggttga tttaagtcaa tgttttttaa
    22021 tggttagtgg aaggctaagt tctgaaatgg tagctaaagc agttatgcat aaaattccag
    22081 tgcttgtttc acgcacggct cctacttgtt taggggttat gatagcaaga aaatttgatt
    22141 taacgctttg tggttttgct agagaaaata agatcaatat ttatagtgga gaatttagaa
    22201 ttcatggata aaaatcaaga aaaagaaatc atctcatata tgagagaatt gttaaatagc
    22261 aatgaaaaat tagattgtgg tacggctttt aaaattgcaa agaaatttaa tataaatata
    22321 gaaaaaatcg gacaattagc cgatgaaaat cacatgagaa ttgataattg cgagttgggg
    22381 caatttggac atttagattt tgaaaaagca aagattgaag tgcttaaaaa aatagaacct
    22441 agtttagatg aaaagcgtag aattttttgt aaagatgcaa gagatattgc taaagaaggt
    22501 tgtggactta aaagtatgcg ttcagcttta aaaacttata aggttgatgt aaagtattgt
    22561 caacttggtt gttttaaaga aaaaaaaggt aagcaattta tagtaagaac aaaaacttgg
    22621 attgaaaatg cggatggaga tttgcttttt ggtcgaggaa aaacagaact tttagaactt
    22681 atcggacaaa caggtagttt attacatgct tctaaactta tggggattaa ttataaaaaa
    22741 gcttggatgc atttacaaac cttacaaaaa aattctcaag aaattttagt tagcacaaga
    22801 caaggacgct ctaaagaatc aggaacaaaa cttactccta gagctatgga attgatggaa
    22861 aattactcta ttttgcaaaa agacatagaa gaatacgcta ataaacgctt taaagaattg
    22921 tttttaaaag gaaaaaaata aatcttctat caaaaaatac t
//
LOCUS       DAPIYB010000018        22716 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.018, whole genome shotgun sequence.
ACCESSION   DAPIYB010000018 DAPIYB010000000
VERSION     DAPIYB010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22716
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.018"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            111..1910
                     /locus_tag="RJ318_000547"
     CDS             111..1910
                     /locus_tag="RJ318_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin attachment protein"
                     /protein_id="HDV7430442.1"
                     /translation="MAKKFIDVMDTSFRDGFQSVYGARVLMDDFFPAVEAAKEAGITH
                     FEFGGGARFQSLYFYLNEDAFTMMDRFRAIVGKDANLQTLARGVNTVTLDTGSSELID
                     LHAKLFAKHGTTTIRNFDALNDINNLKFSGECIAKHRLKHEIAITLMDLPPNCKGAHD
                     VPFYEKILKEILAAEIPFHSICFKDASGTSNPNKIYETIKMARKILPQDMHIRLHTHE
                     TAGVSIACYLAALEAGVDGIDLAAAPVSGGTSQPDILTMMHALKGKDYDLGGLEEEKI
                     LKYEEVLKDCLKEYFLPPEATMVNPLIPFSPMPGGALTANTQMMRDNNILDKFPQVIH
                     AMREVVEKGGFGTSVTPVSQFYFQQAFNNVMFGSWKKIAEGYGKMVLGYFGKTPVAPD
                     ANIIELASKQLNLEPTTELAINIADKDESKSIAYTKTLLEKEGIETSEENIFVAAACK
                     EKGIAFLKGEAKVNIRKLASMPKPMSADENKFTVAVNGNKYHVEVSYGFDKDVNVKSV
                     KKVEENKNIISSNSTSSVDAENEVLAGISGNVFKIYVNEGEEVKSGQAIMVLEAMKME
                     IEVNAPKDGIILELCIKIGDTVNEGEVLAIYKN"
     gene            1923..3497
                     /gene="pckA"
                     /locus_tag="RJ318_000548"
     CDS             1923..3497
                     /gene="pckA"
                     /locus_tag="RJ318_000548"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDV7430443.1"
                     /translation="MKKFDKLGLDNIKEIFHNLSYDELNAHEKANNEGLSTDNDTFCV
                     DTGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQPITKELFDKLLTKAKQELSGKKIYVQ
                     DVFCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINED
                     YKQDGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANV
                     GEKDDVALFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDEGVFNFEGGCYAKTINLDPE
                     HEPEIYGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHP
                     KNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEP
                     FMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGS
                     ITKCEFENFEVFDLAIPKALEGVESVLLNPINTWLDKNAYIATRDKLAHMFIQNFKRY
                     EDVKEGIEFSKFGPKI"
     gene            3507..4889
                     /gene="argH"
                     /locus_tag="RJ318_000549"
     CDS             3507..4889
                     /gene="argH"
                     /locus_tag="RJ318_000549"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDV7430444.1"
                     /translation="MKNEMWSGRFSGASDELLKEFNASLNVDKTLFNEDIQGSIAHAT
                     MLESCGILKKEELDAIIKGLEQVRSEIEQGKFIFDIKDEDIHMAVEKRLSEIIGSEIG
                     GRLHTARSRNDQVATDFKLFVKKSHIELIKLLKELIQTMLEHAKVHKKTIMPSFTHLQ
                     HAQPVSFSFYILAYAFMLMRDIKRLQNSLELADFSPLGSCACAGTSYATNRELSAKIL
                     GFKDIMPNAMDGVSDRDFALDLLYDIAVIFTHTSRLCEEMILFSSSEFSFITISDSFS
                     TGSSIMPQKKNPDVCELIRGKTGRVYGNLISLLTIMKALPLAYNKDMQEDKEGIFDSV
                     KTAKDSLIILNAMLQEIQINKENMLNACKKGHLLATDLADYLVREKNIPFRKAHFIVG
                     NVVAQAEAQGIDISEIKDLSKIDPVFDEKAMELLNFEFSLNSKQSEGSSSIASVEKQI
                     QILEGFIQNL"
     gene            complement(4911..6014)
                     /gene="ychF"
                     /locus_tag="RJ318_000550"
     CDS             complement(4911..6014)
                     /gene="ychF"
                     /locus_tag="RJ318_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDV7430445.1"
                     /translation="MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAM
                     VEVPDLRLNELAKIVKPERIMHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVIL
                     HIVRCFDEENITHVEGGVDPLRDVEIINTELILADIEQLSKKIEKLTKEAKANQKGAK
                     ESLELANSLLDHLNKGLAASSYPEKESEIYQALIKELRLLSAKEVIYGANVDENGISE
                     DNDYVKALKEYAKKNDHEVIKLCAKIEEELVGLSDEESHEFLSSLGVNESGLDQIIRT
                     AFAKLGLISYFTAGVVEVRSWTIKKGWKAPKAASVIHNDFEKGFIKAEVISYEDYIQY
                     KGENGAKEAGKLRLEGKDYIVLDGDVMHFRFNV"
     gene            complement(6011..7462)
                     /locus_tag="RJ318_000551"
     CDS             complement(6011..7462)
                     /locus_tag="RJ318_000551"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDV7430446.1"
                     /translation="MKFELNDKKLDAIKADFELVFIQDKNLKIFNKEKDFFKLNNYKG
                     EGALLDLNNKKLYLELKSLAYEDIRLSLCTAYKTLEKLNIKSVKLPSIIGDCVVRSFA
                     SLVEGVLFGAYKFDKYKSEKKTSTLEKFIISNEELNGKKFNKDEAKIGLERGEILANA
                     TNFTKNIVNEIPEIYTPLKMAEDAQNLAKENKNIICKIYDEKFLAKEKMNAFLAVNHA
                     SVHPPRLIHLSYKAKNAKKRVVFVGKGLTYDSGGLSLKPADFMLTMKADKSGAAAAMG
                     IIKAVAELALDLEVHCILGATENMIGGNAYKPDDVLISREGVSIEVRNTDAEGRLVLA
                     DCLSFAQDLKPDLLIDMATLTGACVVGLGEFTSAIMGNNEELQNDFYLSSKKSGEYTT
                     ILHFNPHLRELIKSNIADVSNTASSRYGGAITAGLFLDKFIRKEYKDKWLHLDIAGPA
                     YTEKSWGYSSFGAGGAGVRMCVNYLIQILRKAK"
     gene            complement(7459..8055)
                     /locus_tag="RJ318_000552"
     CDS             complement(7459..8055)
                     /locus_tag="RJ318_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV7430447.1"
                     /translation="MEEFLKNLLYQYKDLAYIIIFLWCILEGELALILAGIFAHQGHV
                     NLGFVIFIAGLGGFVGDQIYFYIGRYNKCYIQKKLKTQRRKFAVAHLLLQRFGWPIIF
                     IQRYMYGFRTIIPMSIGITRYSAKKFAIINLFSAWVWASITILLAWYFGEQIWKMVTW
                     AEEHWYYAAIIIIAFLSLLLFGFKQMEKAILKDKRKKS"
     gene            complement(8074..8622)
                     /gene="apt"
                     /locus_tag="RJ318_000553"
     CDS             complement(8074..8622)
                     /gene="apt"
                     /locus_tag="RJ318_000553"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDV7430448.1"
                     /translation="MIKLTQEEQKYLLDSIRIIPDFPKKGIIFRDITTLLNNKEALNF
                     LLKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFSCEYD
                     LEYGSDKVELHKDAFKNIQNARVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLIN
                     LKDLNGANKLEKLTSVYSVLEI"
     gene            complement(8619..8951)
                     /locus_tag="RJ318_000554"
     CDS             complement(8619..8951)
                     /locus_tag="RJ318_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430449.1"
                     /translation="MFTNWLVLTILICATIYLIVMLFYYKTLLNKEKTSKDFIKNNLD
                     DTEIVIRKLQIQLQRSLGNIDILTEELNKIKADLTSLRTRNSQYRLENDKLRQRIKEL
                     EAKIEALL"
     gene            complement(8951..9388)
                     /gene="rpiB"
                     /locus_tag="RJ318_000555"
     CDS             complement(8951..9388)
                     /gene="rpiB"
                     /locus_tag="RJ318_000555"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HDV7430450.1"
                     /translation="MLREKIYIASDHAGFELKEKICVFLKEKNIIFNDLGTNTCASCD
                     YPDYAHLLAEKINKRSFGILICGSGIGISIAANRHKNIRCALCHESLSAELARRHNDA
                     NVLALGGRLIGVELAIDIIEKFIQTPFEEGRHMQRIQKIEVKI"
     gene            9554..10108
                     /locus_tag="RJ318_000556"
     CDS             9554..10108
                     /locus_tag="RJ318_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HDV7430451.1"
                     /translation="MKLILIGSSTGGPNQLKFLLKDIDVKNTCVVIAQHMSASFIPSF
                     VGQFNKEAFSEVCLLNDKEILSNKIYICPKNTILSGNLNIVAAWQDVASSFKPSVDLL
                     FHSAVSLAKTNKILAIILTGMGDDGAKGLFELYKTGVRCLCENEADSVVYGMPKRAKD
                     MNPHLKPMSLKEIKKEIVNFIDQD"
     gene            10124..10912
                     /locus_tag="RJ318_000557"
     CDS             10124..10912
                     /locus_tag="RJ318_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDV7430452.1"
                     /translation="MEKKITPSELELNEFIKIINEMSGIDLTDKKNILALKLNKFLEG
                     TNTKNFSEFLGKLKSNRQLKQETLDFVTIGETYFLRELAQLKEIIYYAKSLEKRVNIL
                     SAPCSSGEEVYSLALLAAQNFIKDMYILGVDINSSVIEKAKLGKYQGRTLQRLSESEK
                     RRFFLESEDKFYTINKNELCTCKFELCNVFEEKFSRLGKFDIIASRNMIIYFDHESKL
                     KLMERFHRILNDKGRLYVGNADLIPETIYFKKIFSPRGVYYEKV"
     gene            11048..11776
                     /locus_tag="RJ318_000558"
     CDS             11048..11776
                     /locus_tag="RJ318_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDV7430453.1"
                     /translation="MIELKNVNKYYGTHHVLKNINLSVKEGEKLVIIGPSGSGKSTTI
                     RCMNGLEEVSSGEVVVNNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPM
                     KLQKKSKKEAEETAFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFD
                     EPTSALDPETIQEVLDVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEEN
                     IPSEFFSNPKTERARLFLGKILKN"
     gene            11798..12577
                     /gene="peb1A"
                     /locus_tag="RJ318_000559"
     CDS             11798..12577
                     /gene="peb1A"
                     /locus_tag="RJ318_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adhesin/ABC transporter
                     aspartate/glutamate-binding protein PEB1a"
                     /protein_id="HDV7430454.1"
                     /translation="MVFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGV
                     KNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSV
                     DAVIATFTITPERKRIYNFSEPYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTK
                     KAIGEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDKSEILPDS
                     FEPQSYGIVTKKDDPAFAKYVDDFVKEHKNEIDALAKKWGL"
     gene            12579..13331
                     /locus_tag="RJ318_000560"
     CDS             12579..13331
                     /locus_tag="RJ318_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7430455.1"
                     /translation="MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDAF
                     INGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF
                     LFYALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQ
                     QMRYIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAY
                     IFAAVLYFIICYPLAYFAKAYENKLKKAHLTR"
     gene            13342..14001
                     /locus_tag="RJ318_000561"
     CDS             13342..14001
                     /locus_tag="RJ318_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7430456.1"
                     /translation="MENVFNAQNIEFLMQGLFLTLKIALATCIISIVFGTFLAITKNY
                     GDRLSKFLAACYIDIFRNTPLLLWMLAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMA
                     EIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAY
                     LAGLGIAELTYNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTAYI
                     S"
     gene            14109..15038
                     /locus_tag="RJ318_000562"
     CDS             14109..15038
                     /locus_tag="RJ318_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HDV7430457.1"
                     /translation="MRGYKIFSGSANVEFARQVSKYLSLPLSDAGVKRFSDGEISVQI
                     DESVRGKDVFIIQSTCAPTNDNLMELLILTDALRRSSANSITAIIPYFGYARQDRKAN
                     PRVPITAKLVANLIQAAGIDRVATIDLHAGQIQGFFDIPVDNLYGSIVFNDYIKAKHF
                     KNAIIGSPDIGGVARARSVAKHLGLDIVIVDKRREKANESEVMNIIGDVKDKEVILVD
                     DIIDTAGTIVKAAEALKEKGAKSVMACCTHAVLSGKAYERIASGVLDELVVTDTIPLK
                     EQLPNIKVLSVTPVFAEVIRRVYHNESVNSLFI"
     gene            15205..17316
                     /locus_tag="RJ318_000563"
     CDS             15205..17316
                     /locus_tag="RJ318_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HDV7430458.1"
                     /translation="MTQLSTKILWLFVAALGAICFGYLALQNGESVSAIYLVVAAVCI
                     YMIGYRFYGSFVAYKVLELDKNRATPALVENDGRDFVPTNKAVLFGHHFAAIAGAGPL
                     VGPILAAQMGYLPSMLWILVGGVLAGAVHDFVVLFISTRRKGRSLGEMIKDEMGKFTG
                     GVAMVAIFGIMLIIIAILAMVVVKALAESPWGLFTIAMTIPIAIFMGIYMRFIRPGRV
                     GEASIIGFVLLILAIHYGSVIAADPYWAKIFTLEAPTLAIVMMAYGFIASVLPVWFLL
                     APRDYLSTFLKIGVIVVMAVAIVLVAPDLQMPKANTQYFDGTGPVFAGGVFPFLFITI
                     ACGAISGFHALISSGTTPKMLENETHTLAVGYGSMLAESAVAIMALICACILHPGLYF
                     AINSSSALIGTDVVNVAQTISSWGFSITPEEITTLTTNIGEYTILSRTGGAPTFAIGV
                     ALILHELFGGVDLMAFWYHFAILFEALFILTAVDAGTRACRFMVQDILGNVYKPLGDI
                     HNYPAGLLATALSVAGWGYFLYQGAIDPKGGIYTLWPLFGVSNQMLAGMALLLATTIL
                     VKMGKARYTWVTLVPAVFVLVATLYGGIQKIMPYEEGNKIANAVSHVAAVSIQSQKIK
                     DLEFKLNNTKDEKEISTIRKEISIATQNKVGNLLNAILCVFFMIATLLVIISCIGICL
                     GKIKIPLKETKYIKIDEFQKI"
     gene            17297..17494
                     /gene="kcuS"
                     /locus_tag="RJ318_000564"
     CDS             17297..17494
                     /gene="kcuS"
                     /locus_tag="RJ318_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_148936501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KCU-star family selenoprotein"
                     /protein_id="HDV7430459.1"
                     /translation="MNFKKFKYYYEKAERFFHPLVGLSSYDKYLEHMKQKHPGKIPKT
                     RGEFFKECLDKKYNSGGLNKC"
     gene            complement(17534..17947)
                     /locus_tag="RJ318_000565"
     CDS             complement(17534..17947)
                     /locus_tag="RJ318_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDV7430460.1"
                     /translation="MRDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAAREL
                     SPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSC
                     INVTSALVTYVSVTRDGKKNPISEELKRIHGFLNA"
     gene            18009..19841
                     /gene="ciaB"
                     /locus_tag="RJ318_000566"
     CDS             18009..19841
                     /gene="ciaB"
                     /locus_tag="RJ318_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein CiaB"
                     /protein_id="HDV7430461.1"
                     /translation="MNNFKEIAKLVRKYKERNNALYEFLDKEDVGEYFRSLISLSELK
                     QDKTTMLAILRRLIDLKEENLVQEWKKNNFKEDKIIELKHKFYEEVRKFYEKEHQNLI
                     NEIKEKKLLNNFYQSLIQGVHNIGLIMNIFEISWTKEIIEKNNKILSTQFPNLDDAME
                     FLRKNHLYQKTPEGEICERSYGVLVRIGNLWKFVPYARFFENEILKLEFAFENMIDQL
                     KIFASSEEEKAYIEYFEKLKLAFCEKDEDRVIKAWQEAEFAWMKVKSPLQVGHPLEYY
                     EDNYTHAVALEWDIRIEDENDFDVLKFGNEIKESFEHVYKNIGLEDCELEKEVLSNIE
                     KTQLYICTPMIFYGAELKGLFSAQVVPNDEFVSSKAGKKIFAFINFVYENAKTKPFMK
                     ISSEVFDKEFLDFGRNILFYQEKIWKRVYEVSTIGHEFGHIFFIANDTEKTMNQSGFF
                     KNIEEYKATTGGLINFFYHEQDDLIMPVFHELIKRAIGLISWQRVDEVRPYYTEGLIH
                     LSLLFESEVLIFENNNLKINFDLGYYEKFKELTLKNYHELAKHYALRLDAKEFLSRFC
                     EIEDNIFLPIMPKCKEFVKFYYDLYEKIGNEIDNSGEFERYKKK"
     gene            19943..20239
                     /locus_tag="RJ318_000567"
     CDS             19943..20239
                     /locus_tag="RJ318_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDV7430462.1"
                     /translation="MTKADFISLVAQTAGLTKKDATTATDAVISTITDVLAKGDSISF
                     IGFGTFSTQERAAREARVPSTGKTIKVPATRVAKFKVGKNLKEAVAKASGKKKK"
     gene            20366..21265
                     /gene="cysM"
                     /locus_tag="RJ318_000568"
     CDS             20366..21265
                     /gene="cysM"
                     /locus_tag="RJ318_000568"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HDV7430463.1"
                     /translation="MKVHEKVSELIGNTPIIHLKKFGINVFAKCEFLNPSHSIKDRAA
                     FEMIKDALDSKKINQDTTIVEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMI
                     TLFGARLELTPANLGMKGAVDKANEILLNTPNSFMVSQFENISNKNAHRKNTALEILR
                     DLDNELDIFVAGFGTGGTISGVGEILKEKLEKVHIVGVEPLNSPLLSKGEAGSHKIQG
                     IGANFIPAILNKEVIDEVITVSNEDAINTAKELAKSGLMVGISSGANVFAASMLAKKF
                     PDKRILTMLNDTAERYLSTDLFA"
     gene            complement(21272..21832)
                     /locus_tag="RJ318_000569"
     CDS             complement(21272..21832)
                     /locus_tag="RJ318_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HDV7430464.1"
                     /translation="MKKNIILFIVIVAIILGVIFFIKNHQNSYDFILKSDLKEETTLK
                     DFKGDKLIIYFGYTYCPDVCPATLSLVGKALKQINNPKAHLLFISLDPNRDNNLSNTN
                     EWLRYFYPKADALIAKDEKTLQKITKQYNVQYQKIDLNDSFMGYSIAHSNMLYLIDEK
                     GHFYKEINDLNPQEILRELRIFLNSQ"
     gene            complement(21829..22281)
                     /locus_tag="RJ318_000570"
     CDS             complement(21829..22281)
                     /locus_tag="RJ318_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430465.1"
                     /translation="MRKIIFILAFAFVIAILYIIFDFYVIKDSQKITKTDFSTPLTCD
                     LNVKDCTYSFNNKKVLISLNPKPLQSLDVTNLKIVNLGNYNNLGIKIYGLNMYMGEIK
                     PKIHRLNSTDYESKIVLAACVLDTMRFRVEFMDNNKPIGFYFDFELKK"
     gene            complement(22285..22704)
                     /locus_tag="RJ318_000571"
     CDS             complement(22285..22704)
                     /locus_tag="RJ318_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HDV7430466.1"
                     /translation="MKKILLLGALFAVNLWAVNDIEVKNAFVKQTPPHAQNSAIFLTI
                     FNNTNKDIALISAKSDISEVSELHTHIHKDGKMMMQKIPEIIIKAHSSTELKSGGYHI
                     MLLKLKKPIIKDTKVNLDLKFNNHKTIELKNIDSKEF"
BASE COUNT         7777 a         3007 c         3981 g         7951 t
ORIGIN      
        1 cttaatttgg ttgtttttta ttcgttttat atcgcctata gcaataattt tggtaatgtg
       61 ttatcaaatt tttgtataat aatgaaaaaa tattttttta aggaaaaata atggctaaaa
      121 aattcatcga tgtaatggat acaagcttta gggacggttt tcagtctgtt tatggagcta
      181 gggttttaat ggatgatttt tttcctgcag tagaagcagc aaaagaagcg ggtattactc
      241 attttgaatt tggtggtggt gctagatttc aaagcttgta tttttatctt aatgaagatg
      301 cttttaccat gatggataga tttagggcta ttgtaggaaa agatgctaat cttcaaactt
      361 tagcaagagg ggttaatact gttactttag atactggaag tagtgagctt attgatttgc
      421 atgcaaaact ttttgcaaaa cacggtacca caacgataag aaattttgat gctcttaatg
      481 atataaataa tttaaaattt agtggtgaat gtatagcaaa acatagatta aaacatgaaa
      541 tcgctattac cttaatggat ctaccgccaa attgcaaagg tgctcatgat gtgccttttt
      601 atgaaaaaat tttgaaagaa attttagcag cagaaattcc ttttcacagc atttgtttta
      661 aagatgcaag tggaacttca aatccaaata aaatttatga aaccattaaa atggcaagaa
      721 aaattttacc tcaagatatg catattagac ttcatacgca tgaaactgca ggggtgagta
      781 tagcctgcta tcttgcagca cttgaagcag gtgttgatgg tatcgatttg gctgcagctc
      841 ctgtaagtgg tggaacttct cagcctgata ttttaaccat gatgcatgcc ttaaaaggta
      901 aagattatga tttaggtgga cttgaagaag aaaaaattct aaaatacgaa gaagttttaa
      961 aagattgttt aaaagagtat tttttacccc ctgaagctac tatggtaaat ccacttattc
     1021 ctttttctcc tatgccagga ggagctttaa cggcaaatac acaaatgatg agggataata
     1081 atattttaga taaatttcca caggtcattc atgctatgag agaagttgta gaaaaaggtg
     1141 gatttggtac ttcggttact ccagtttctc aattttattt tcaacaagca tttaataatg
     1201 ttatgtttgg gtcttggaaa aaaatcgcag aaggttatgg aaaaatggtg cttggttatt
     1261 ttggaaaaac tccagttgca cccgatgcaa acattattga gcttgcttca aaacaactta
     1321 atttagaacc tactacagag cttgctataa atatagctga taaagatgag agtaaaagta
     1381 tagcttatac caaaaccttg cttgaaaaag agggtataga aacgagtgaa gaaaatatat
     1441 ttgttgcagc agcttgcaaa gaaaaaggta tagcattttt aaaaggagag gcaaaggtaa
     1501 atatacgcaa attagccagt atgccaaaac ctatgagtgc agatgaaaac aaatttaccg
     1561 tagctgtaaa tggtaataaa tatcatgtag aagtaagcta tggctttgat aaagatgtta
     1621 atgttaaaag tgtgaaaaaa gtagaagaaa ataaaaatat tatttcttca aattcaacaa
     1681 gttctgtaga tgctgaaaat gaagttttag caggtatttc aggtaatgtc tttaaaattt
     1741 atgttaacga aggcgaagaa gtaaaatcag gtcaagctat catggtttta gaagcaatga
     1801 agatggagat tgaggttaat gccccaaaag atggaattat tttagagctt tgtattaaaa
     1861 taggtgatac tgttaatgaa ggcgaagtat tagctattta caagaattaa agtgagggaa
     1921 aaatgaaaaa atttgataag ttaggtttgg ataatataaa ggaaattttt cataatttaa
     1981 gttatgatga attaaatgct catgaaaaag caaataatga aggtttaagc acggataatg
     2041 atactttttg tgtagataca gggattttta caggtagaag tcctaaagat aaatattttg
     2101 taaaacaaga tccatctagt aaatatatag cttggggaaa ggtaaatcag cctattacaa
     2161 aagaattatt tgataaactt ttaactaaag caaagcaaga attaagcgga aagaaaattt
     2221 atgttcaaga tgttttttgc ggtgcttctt tgcaaagtcg caaagcagta agatttgtta
     2281 ctgaaattgc atggcaagcg cattttgtta aaaatatgtt tattcgccca agtcaagagg
     2341 aacttgagaa ttttaaagca gattttattg tttataatgc ttgcaaatgc atcaatgaag
     2401 attacaaaca agatggttta aattcagagg tttttgtgat ctttaatgtt gaagaaaata
     2461 tagcggttat tggtggaact tggtatggtg gagaaatgaa aaaaggtatt ttttctatga
     2521 tgaattattg gttaccacta gaaaataaac tttctatgca ttgtagtgca aatgtcggag
     2581 aaaaagacga tgtggcactt ttctttggac ttagcggtac aggaaaaact acgctttcaa
     2641 ccgatccaaa aagaagactc ataggtgatg atgagcatgg gtgggatgat gaaggtgtgt
     2701 ttaattttga gggcggttgc tatgcaaaaa caatcaatct tgatcctgaa catgagcctg
     2761 aaatttatgg agctattaaa agaaatgcac ttttagaaaa tgtagtttta agagctgata
     2821 agagtgttga ttatgctgat gcctcaaaaa cagaaaacac gagagtttct tatcctatag
     2881 agcatattga aaatcatgag cctagtctaa aagcagggca tccaaaaaat attatatttt
     2941 taagtgcaga tgcttttgga attttacccc cggtaagcaa actaagcaaa gagcaggcta
     3001 tgtattattt tttaagtggc tatacagcaa aagtagctgg aactgagcgc ggtataacag
     3061 agcctcaagc aactttttca gcttgttttg gagaaccttt tatgccttta catccaacgg
     3121 tttatgcgag attgcttggt gaaaagattg aaaaacatga agttaatgtt tatcttgtta
     3181 atacgggttg gagtggcgga agctacggtg tgggtaaaag aatgagcatt aaggctacta
     3241 gggcttgcat taatgccatt ctagatggaa gtattacaaa atgcgaattt gaaaattttg
     3301 aagtgtttga tttagctatt ccaaaagctt tagaaggtgt agaaagtgta cttttaaatc
     3361 ctataaatac ttggttagat aaaaatgctt atattgcaac aagagataaa ttagcacata
     3421 tgtttataca aaattttaaa cgttatgaag atgtcaaaga aggcattgaa tttagcaaat
     3481 ttggaccaaa aatttaaggc atttaaatga aaaatgaaat gtggtcagga cgttttagtg
     3541 gtgcaagtga tgagctttta aaagaattta atgcaagttt aaatgtagat aaaactttgt
     3601 tcaatgaaga tatacaaggt tctatagcac acgctacaat gcttgaaagt tgtggtattt
     3661 taaaaaaaga agaattagat gctattataa aaggtttaga gcaggttaga agtgaaatag
     3721 agcaaggtaa atttattttt gatattaaag atgaagatat tcatatggct gtagaaaagc
     3781 gtttaagcga gattataggt agtgaaattg gcggaagact acatactgca agaagtagaa
     3841 atgaccaagt ggctactgat tttaaacttt ttgtaaaaaa atctcatatt gaactcataa
     3901 agcttttaaa agaattgatt caaaccatgc tcgaacatgc taaagtgcat aaaaaaacta
     3961 ttatgccaag ttttacacat ttacagcacg ctcagcctgt gagtttttct ttttatattt
     4021 tagcttatgc ttttatgtta atgcgagata ttaagcgttt gcaaaatagc ctagaacttg
     4081 cagacttttc accacttgga tcttgtgcat gtgcaggaac aagctatgct accaatcgtg
     4141 agttgagtgc taaaatttta ggatttaaag atattatgcc aaatgctatg gatggagtga
     4201 gtgataggga ttttgctctt gatttgcttt atgatatagc agttattttt acacacactt
     4261 caagactttg tgaggaaatg attttatttt caagctcaga attttctttt ataaccataa
     4321 gtgatagttt ttcaacggga agttctatta tgcctcagaa aaaaaatcct gatgtttgtg
     4381 agcttatacg tggaaaaaca gggcgtgttt atggaaattt gatttctctt ttaactataa
     4441 tgaaagcttt acctttagcc tataataaag atatgcaaga agataaagaa gggatttttg
     4501 atagtgtaaa aaccgctaaa gatagcttaa tcatcttaaa tgcaatgcta caagaaatac
     4561 aaattaataa agaaaatatg cttaatgctt gtaaaaaagg tcatttattg gctaccgatt
     4621 tggcagatta tttggtgcgt gaaaaaaata ttccttttag aaaagcacat tttatagtgg
     4681 gaaatgttgt tgcacaagct gaagcacaag gtattgatat aagtgaaatt aaagatcttt
     4741 caaaaataga tcctgtattt gatgaaaaag ctatggaact tttaaatttt gaattttctt
     4801 taaattctaa gcaaagtgaa ggctcaagtt ctattgcaag cgtagaaaag caaattcaaa
     4861 ttttggaagg ttttattcaa aatttataaa tattgtttag gctattttgc ctaaacattg
     4921 aatctaaaat gcattacatc gccatctaaa acgatatagt cttttccttc aaggcgtagc
     4981 tttcctgctt ctttggcgcc attttcgcct ttgtattgga tataatcttc ataggaaata
     5041 acttcagctt ttataaagcc tttttcaaag tcattgtgaa ttacacttgc tgcttttggt
     5101 gctttccagc cttttttgat tgtccaagaa cgcacttcaa ctacaccagc ggtaaaataa
     5161 ctgatcagtc caagcttagc aaaagcagtg cgtatgattt gatcaagacc gctttcgtta
     5221 actcctagag aacttaaaaa ttcatgactt tcttcatcgc ttaatcctac taattcttct
     5281 tcgatttttg cacaaagctt gataacttca tgatcatttt ttttagcata ttcttttaaa
     5341 gcttttacat aatcattatc ttcactaata ccattttcat caacatttgc accataaatc
     5401 acttctttag cagaaagcag tcttaattct ttgattaagg cttgataaat ttcactttct
     5461 ttttcagggt aagaacttgc agctaagcct ttgtttaaat gatcaagtaa ggaatttgca
     5521 agttcgagac tttctttagc acccttttga ttggctttgg cttctttggt gagtttttct
     5581 atttttttac tcagttgttc aatatctgct aaaataagct ctgtattgat aatttctaca
     5641 tcacgtaaag gatcaactcc accttcaaca tgggtaatat tttcttcatc aaaacaacgt
     5701 actatatgca aaataacctc agtttcacgt atatttgaaa gaaatttatt tcccaagcct
     5761 tcgcctttac ttgcgccttt aacaagtcca gcgatatcta caaattctat taaagaatgc
     5821 ataattcttt caggttttac tattttagca agttcattaa gtcttaaatc aggaacttca
     5881 accatggctt tattaggctc tatggtgcag aaaggatagt ttgcactttg ggcattttgt
     5941 gctttagtta aagcattaaa agttgttgat ttgccaacat ttggaagtcc tactatacct
     6001 acgcttaaac tcatttagct ttccttaaaa tttgaattaa ataattaaca cacattctaa
     6061 ctccagctcc acctgcgcca aaactagaat atccccaaga tttttctgta taagcaggtc
     6121 ctgctatatc aagatgtagc catttatctt tatattcttt acgaataaat ttatctaaaa
     6181 ataaccctgc ggtaattgca cctccgtagc gactagaggc agtattacta acatcggcaa
     6241 tatttgattt tataagttct cttaagtgag ggttgaaatg taagattgtg gtatattctc
     6301 cgcttttttt agagcttaga taaaaatcat tttgcaattc ctcattattt cccataatag
     6361 cgcttgtaaa ttctccaagt cctacaacac aagctccagt aagagttgcc atatcgataa
     6421 gtaaatcagg ttttaaatcc tgtgcaaaag aaagacaatc agctaaaacc aagcgtcctt
     6481 ctgcatctgt atttcttact tctatgctta caccttcacg actgattaac acatcatcag
     6541 gcttataagc attgccgcct atcatatttt cagttgcgcc caaaatgcaa tgcacttcta
     6601 aatctaaagc aagttcagct acggctttta tgattcccat tgctgctgct gcaccgcttt
     6661 tatcagcttt cattgtaagc ataaaatcag ctggttttaa gcttaatcca ccgctatcgt
     6721 aagttaagcc ttttccaaca aatacaacac gtttttttgc atttttggct ttatagctta
     6781 gatgaatgag gcgtggtggg tgtaccgagg catgatttac cgctaaaaag gcattcattt
     6841 tttctttggc taaaaatttt tcatcataaa ttttacaaat aatgttttta ttttctttag
     6901 ctaaattttg cgcatcttct gccattttta aaggggtgta aatttcagga atttcattga
     6961 ctatattttt agtaaaattt gtagcattgg ctaaaatttc tccacgctct aaacctatct
     7021 tagcttcatc tttattaaat ttcttaccat ttaattcttc gtttgaaata ataaattttt
     7081 ccaaagtact tgtttttttc tcgcttttat atttgtcaaa tttataagct ccaaaaagta
     7141 cgccttcaac taaagatgca aaacttctaa ctacacaatc tcctattatg ctaggaagtt
     7201 ttacgctttt aatattaagt ttctcaagag ttttatatgc tgtgcaaaga cttaatctta
     7261 tatcctcata agcaagactt ttaagctcta aataaagctt tttattgttt aagtctaata
     7321 atgcaccttc gcctttgtaa ttattaagtt taaaaaaatc tttttctttg ttaaaaattt
     7381 ttaaattttt atcctgtata aaaacaagtt caaagtctgc ttttatagca tctagttttt
     7441 tatcgtttaa ttcaaatttc atgatttttt ccttttatct ttaagtatag ctttttccat
     7501 ttgtttaaaa ccaaataata aaagggataa aaaagctata ataataatgg ctgcataata
     7561 ccaatgttct tcagcccaag tcaccatctt ccaaatttgt tctccaaaat accaagctaa
     7621 aagtatagtg attgatgccc aaacccaagc actaaaaaga ttgataatag caaatttttt
     7681 tgcactataa cgcgtgattc ctatactcat aggtataatg gttctaaagc catacatata
     7741 gcgttgtata aaaataatag gccaaccaaa acgttgtaaa agtaggtgtg ctactgcaaa
     7801 tttacgcctt tgagttttta attttttttg tatgtagcat ttattatatc ttcctatata
     7861 gaagtaaatt tgatcgccta caaaaccgcc aagacctgct ataaatataa caaagcctaa
     7921 atttacatgt ccttgatggg caaaaatacc agctaaaatt aaagctaact ctccttctaa
     7981 aatgcaccat aaaaaaataa taatataagc tagatctttg tattggtaaa gtaaattttt
     8041 taaaaattct tccatttgta cctttctata gttttaaatt tctaaaacac tataaactga
     8101 agtaagtttt tcaagtttat ttgctccatt taaatcttta agatttatta aaaaacaagc
     8161 ttcaacacat tttgctccag ctttttgaat gagttcatat gaagctatag ctgttccgcc
     8221 agttgctatt aaatcatcta caagtaaaac tcttgcattt tgaatatttt taaatgcatc
     8281 tttatgaagt tctactttat cgctgccata ttcaagatcg tattcgcagc taaaggtttc
     8341 aaaagggagt tttccaggtt ttctaatagg cacaaaagga agattaagtt ttgcacaaat
     8401 catagatgca aagataaatc ctctgctttc tgttcctgct atgaagtcta gattgtaatc
     8461 tttgtagcgt tcttttaaat gtttaagtag aaaatttaaa gcctctttgt tatttagtag
     8521 agtggtaata tctctaaaaa taattccttt ttttggaaaa tcaggaataa tcctaatgct
     8581 atcaagcagg tatttttgtt cttcttgtgt tagttttatc ataataatgc ctcaattttt
     8641 gcttctaatt ctttaattct ttgtcttagt ttgtcatttt ccaagcgata ttgagaattt
     8701 ctggttctta aagatgtaag gtctgctttg attttattaa gttcttctgt gagtatatct
     8761 atatttccaa gacttctttg aagttgaatt tgtagttttc taatgacaat ctcagtatca
     8821 tcaagattgt ttttgataaa atcttttgat gttttttctt tattaagtag agttttatag
     8881 taaaacaaca ttacaataag atagatagtt gcacaaatca atatagttaa aacaagccag
     8941 tttgtaaaca ttatattttt acctcaattt tttgaattct ttgcatatgt ctcccttctt
     9001 caaaaggagt ttgaatgaat ttttctataa tatctatagc taattcaacc ccaattaatc
     9061 ttccgcctaa tgccaaaaca ttggcatcat tatgccttct tgcaagttct gcacttaagc
     9121 tttcgtggca taatgcacaa cgaatgtttt tatgacgatt tgctgcaata gaaattccaa
     9181 ttccacttcc acaaataaga atgccaaagc tccgtttgtt tattttttcg gcaagtaaat
     9241 gcgcataatc aggataatcg cagcttgcgc aagtgtttgt tcctaaatcg ttaaaaatta
     9301 tatttttttc ttttaaaaat acgcaaattt tttcttttaa ttcaaaacca gcatgatcac
     9361 tagcaatata aattttttcc ctaagcattg gtttcctaat tactatataa aataagataa
     9421 aaacctaatc ttatcatatt aaatcataaa aacagctttt ctttgtttta aaaataagct
     9481 ttatttttct ttatatatgt tagaatcatg tgacaagaaa aataaaattt caataaatta
     9541 agaggagaag aaagtgaagc tcatactcat aggatcttca acaggtggtc ctaatcagct
     9601 taaatttctt ttaaaggata ttgatgtaaa aaatacttgt gtagttatag ctcagcacat
     9661 gagtgccagt tttattccat cttttgtggg gcaatttaat aaagaagctt ttagtgaagt
     9721 gtgcttattg aacgataaag agatattaag caataaaatt tatatttgcc ctaaaaatac
     9781 tattttatct ggaaatttaa atattgtagc cgcttggcaa gatgtggctt caagctttaa
     9841 accgagtgtg gatttacttt ttcattccgc tgtttctttg gcaaaaacaa ataaaatact
     9901 tgctattatt ttaacgggca tgggagatga tggcgcaaaa ggtttatttg agctttataa
     9961 aacaggagtt agatgtttat gtgagaatga agcagatagc gtcgtttatg gtatgccaaa
    10021 aagagcaaaa gatatgaatc cgcatttaaa acctatgagc ttaaaagaaa ttaaaaaaga
    10081 aattgtaaat tttattgatc aggattaata aaaggaaaat tgcatggaaa aaaaaataac
    10141 tcctagcgaa ttggaactta atgaatttat aaaaattatc aacgaaatga gtggtattga
    10201 tttaaccgat aaaaaaaata tactagcttt aaagttgaat aaatttcttg aaggaactaa
    10261 tactaaaaat ttttccgaat ttttgggaaa attaaaaagc aatagacaac ttaaacaaga
    10321 aactttagat tttgtaacca taggtgaaac ttatttttta agagaattgg ctcaattgaa
    10381 agaaataatt tattatgcca aaagcttaga aaagagagta aatatcctaa gcgccccttg
    10441 ttcaagtgga gaagaagtat attctttggc attattggct gcacagaatt ttattaaaga
    10501 tatgtatatt ttaggcgttg atattaattc aagtgtgatt gaaaaagcaa aacttggaaa
    10561 atatcaagga agaactttac agcgattgag cgagagtgaa aaaagaaggt tttttttaga
    10621 aagcgaagat aaattttata ctattaataa aaatgagctt tgtacttgta aatttgaact
    10681 ttgcaatgtt tttgaagaaa aattttcaag attgggaaaa tttgatatta tagcttctag
    10741 aaatatgatt atttattttg atcatgaatc aaaactaaaa cttatggaga ggtttcatag
    10801 aattttaaat gataaaggaa ggctttatgt tggcaatgct gatttaattc cagagactat
    10861 ttattttaaa aagattttct ctccaagagg tgtttactat gaaaaagtat aaattctaaa
    10921 aattactaaa agttacactt tggaaattta ttagtaaaaa taagttacat tttgaagtag
    10981 ttttctttat ttaatgataa aataatttca attaatttta tatttagcta aaaataaagg
    11041 aaaaaacttg attgaattaa aaaatgtaaa caaatactac ggaactcatc atgttctaaa
    11101 gaatattaat ctttctgtta aagaaggtga gaagcttgtt attataggtc caagtggaag
    11161 tggaaaaagt acaactatcc gttgcatgaa tgggcttgaa gaagttagtt caggagaggt
    11221 cgtagttaac aatcttgttt taaatcataa aaataaaatt gaaatttgcc gaaaatattg
    11281 tgcaatggtt tttcagcatt ttaatttata tccacatatg acggttttgc aaaatttgac
    11341 cttagctcca atgaaacttc aaaaaaaatc taaaaaagaa gctgaagaaa cagcttttaa
    11401 gtatttaaaa gttgtaggtt tgctggataa agcaaatgtt tatccagcaa ccctttcagg
    11461 tggacaacaa caacgcgttg ctatagcaag atcactttgt actaaaaaac cctatatttt
    11521 atttgatgaa cctacttcag cccttgatcc agaaaccata caagaggttt tagatgtaat
    11581 gaaagaaatt tcacatcaaa gcaatactac catggtggtt gttacacacg aaatgggttt
    11641 tgcaaaagaa gtagcagata ggattatttt tatggaagat ggtgctattg tggaagaaaa
    11701 tattcctagt gaatttttct caaatccaaa aactgaaaga gcgcgactct ttttagggaa
    11761 aattcttaaa aattaaccaa aattgaaagg agaaaaaatg gtttttagaa aatctttgtt
    11821 aaagttggca gtttttgctc taggtgcttg tgttgcattt agcaatgcta atgcagcaga
    11881 aggtaaactt gagtctatta aatctaaagg acaattaata gttggtgtta aaaatgatgt
    11941 tccgcattat gctttacttg atcaagcaac aggtgaaatt aaaggtttcg aagtagatgt
    12001 tgccaaattg ctagctaaaa gtatattggg tgatgataaa aaaataaaac tagttgcagt
    12061 taatgctaaa acaagaggcc ctttgcttga taatggtagt gtagatgcgg tgatagcaac
    12121 ttttactatt actccagaga gaaaaagaat ttataatttc tcagagcctt attatcaaga
    12181 tgctataggg cttttggttt taaaagaaaa aaaatataaa tctttagctg atatgaaagg
    12241 tgcaaatatt ggagtggctc aagctgcaac tacaaaaaaa gctataggtg aagctgctaa
    12301 aaaaattggc attgatgtta aatttagtga atttcctgat tatccaagta taaaagctgc
    12361 tttagatgct aaaagagttg atgcgttttc tgtagacaaa tcaatattgt taggttatgt
    12421 ggatgataaa agtgaaattt tgccagatag ttttgaacca caaagttatg gtattgtaac
    12481 caaaaaagat gatccagctt ttgcaaaata tgttgatgat tttgtaaaag aacataaaaa
    12541 tgaaattgat gctttagcga aaaaatgggg tttataatat gaatgaaagt gtaggttttg
    12601 ttgaacattt aagacaaatt cttacttctt ggggtttata tgatgaaaat agtataagcc
    12661 cttttgcggt atggaaattt ttagatgctt tggataataa agatgctttt attaatggtt
    12721 ttatttatac tttagaagta agcattcttg ctttgcttat agctacaatt tttggaacta
    12781 taggcggagt tatggctaca agtagattta aaattatcag agcctacact agaatttacg
    12841 tagagctttt tcaaaatgtt cctttggtaa tacaaatttt ctttttgttt tatgccttgc
    12901 ctgttttagg tataaggctt gatatattta ctattggtgt attgggtgtt ggggcgtatc
    12961 acggagctta tgtaagcgag gtggttagaa gtggaatttt ggctgtgcca agaggtcagt
    13021 ttgaagcttc tgcgtctcaa gggtttactt atattcaaca aatgcgttat attatagtac
    13081 ctcaaaccat tagaattatt ttaccaccga tgacaaatca aatggtaaat ttaattaaaa
    13141 atacctctgt attgcttatt gtaggtggag ctgagttaat gcattctgct gatagttatg
    13201 cagctgatta tggaaattat gcgccagctt atatatttgc agcggtttta tattttataa
    13261 tttgctatcc tttggcttat tttgcaaaag cttatgaaaa taaattaaaa aaagcacatt
    13321 taacgagata aagggttgtt aatggaaaat gtttttaatg cgcaaaatat tgaattttta
    13381 atgcaaggtt tatttctgac attaaaaata gccttggcaa cttgtattat ttcgattgtt
    13441 tttggaactt ttttagctat aactaaaaat tatggagata gattaagtaa atttttagca
    13501 gcttgctata tagatatttt tagaaatact cctttattgc tatggatgct cgcagcttgt
    13561 tttgttttgc ctgtattttt tggacaattt cctcaagctt tttggggtac tataggattt
    13621 tcactttata cgagttcggt tatggctgaa attattagag gcggattaaa ttctatacca
    13681 aaaggtcagt ttgaagcagc ttattcacaa ggttttggta aattttttac tcttttttat
    13741 attattttac cacaaacttt tagaaaaata atacctgctt tattatctca aattgtaacc
    13801 actgtaaagg atacagctta tttagcaggt ctgggtatag ctgaacttac ttataattca
    13861 aaaactatat tggcaaaact aacaagtttt gaagaaattt tagcgatgat aggtgttgtt
    13921 gcgggaattt attttataat atgtttttca ctttctatgt tggtaagata ttatgccaaa
    13981 aagacagctt atatttctta aaaaagctta tatttttata taagcttttt aaatttacag
    14041 cagtttttaa catttttttt attaaaatct tttgtattaa ttcataattt tattgattaa
    14101 ggttttttat gcgaggttat aaaatttttt caggctcagc taatgtcgaa tttgcaagac
    14161 aagtttctaa atatctctcc ctgcctttaa gtgatgctgg agtaaagcgg tttagtgatg
    14221 gagagattag cgttcaaatt gatgagagtg tacgcggaaa ggatgttttt attattcaaa
    14281 gtacttgcgc tcctacaaac gataatttaa tggaactttt aattcttaca gatgctttgc
    14341 gtcgctcaag tgcaaattca attacggcta ttatcccata ttttggctat gcgagacaag
    14401 atagaaaagc aaatcctaga gtgccaatta ctgctaaact tgtggctaat ttgattcaag
    14461 cagctgggat tgatcgcgta gctacgatag atttgcatgc aggacaaatt cagggttttt
    14521 ttgatattcc agtagataat ctttatggaa gtatagtttt taatgattac attaaagcca
    14581 aacattttaa aaatgctatt ataggaagtc cagatatagg gggtgttgca agagctagga
    14641 gtgttgcaaa gcatttagga cttgatatag ttatagttga taagcgtcgt gaaaaagcca
    14701 atgaaagtga agtaatgaat attattggag atgtaaaaga taaagaagtt atcttagtgg
    14761 atgatattat tgatactgct ggcactatag ttaaagccgc ggaagcttta aaagaaaaag
    14821 gtgcaaaatc tgttatggct tgctgtactc atgcagtttt aagtggaaaa gcctatgaga
    14881 gaatagcaag cggagtttta gatgagcttg tggtaacaga tactatacct ttaaaagagc
    14941 aattaccaaa tattaaagta ttaagcgtta cacctgtttt tgctgaagta atacgtcgtg
    15001 tttatcataa cgaaagtgta aattctctct ttatttagat taaaaaagct taaagattat
    15061 ttttaagctt ttcattttta tgctacttaa agaaacaaaa aacatatatt tttttaaaaa
    15121 tgtgaaaaaa ctaaacatct ttctatacaa tttaatctat aaatctgcta ttctttgaaa
    15181 atattttatt ttcttaggag aaatatgact cagttaagta ctaaaatttt atggttgttt
    15241 gttgcagctt taggcgctat ttgttttggt tatttagctt tacaaaatgg tgaaagtgta
    15301 tcagcgattt atttggtggt tgctgctgta tgtatttata tgataggata tagattttat
    15361 gggagttttg tagcttataa ggttttagaa cttgataaaa atcgtgcaac accagcactt
    15421 gtagaaaatg atgggcgtga ttttgtgcct acaaataaag ctgtattatt tggacatcat
    15481 tttgctgcta ttgcaggagc aggtccatta gtaggaccta tcttggccgc tcaaatggga
    15541 tatttgcctt ctatgctttg gattttagta ggaggagttt tagcgggtgc tgtgcatgat
    15601 tttgttgttc tttttatatc tactcgtaga aaaggtagaa gtcttggcga gatgattaag
    15661 gatgagatgg gtaaatttac aggtggagtt gctatggtgg cgatttttgg cattatgctt
    15721 attattattg ccattttagc tatggtggtt gtaaaagctt tagcagaatc tccatggggt
    15781 ttatttacta tcgcaatgac gattcctata gcaatattta tgggaattta tatgcgtttt
    15841 atccgtccag gtagagtagg ggaggcttct ataataggtt ttgtgctttt aattttggct
    15901 attcattatg gtagcgttat agctgctgat ccttattggg ctaaaatatt tactttagaa
    15961 gctccaactt tggcaattgt tatgatggct tatggtttta ttgcttctgt tttacctgtg
    16021 tggtttttac ttgctccaag agattatctt tcaacttttt tgaaaatcgg tgttattgtg
    16081 gtaatggctg tagctattgt tttggttgct cctgatttac aaatgccaaa agcaaatact
    16141 cagtattttg atggaacagg tccagtattt gcaggtggag tgtttccatt tttatttatt
    16201 accattgctt gtggtgcgat cagtggtttt catgctttga tttctagtgg aactactcct
    16261 aaaatgcttg aaaacgaaac tcatactttg gctgttggat atggctctat gcttgctgag
    16321 agtgctgtgg cgattatggc tttaatttgt gcttgtattt tacatccagg tctttatttt
    16381 gctataaatt caagctctgc tttgatagga acagatgttg taaatgtagc acaaactatt
    16441 tcaagttggg gatttagtat tactcctgaa gaaattacta ctttaaccac aaatatagga
    16501 gagtatacta tactttcaag aacaggggga gccccgactt ttgctatagg tgtagctttg
    16561 atcttgcatg aactttttgg cggcgtggat ttgatggctt tttggtatca ttttgctata
    16621 ttgtttgaag ctttatttat tttaacagcg gtggatgctg ggacaagggc ttgtcgtttt
    16681 atggtgcaag atatattggg taatgtttat aaacctttag gagatattca taattatcca
    16741 gctggacttt tggctacggc tttaagtgtt gcaggttggg gatattttct ttatcaaggc
    16801 gccattgatc ctaagggagg aatttataca ctttggcctc tttttggcgt gagcaatcaa
    16861 atgcttgcgg gtatggcttt gcttcttgct acaactatac ttgtaaaaat gggcaaggca
    16921 agatatactt gggttacttt agtacctgcg gtatttgtct tagtggcaac tctgtatgga
    16981 ggaattcaaa aaattatgcc ttatgaagaa ggcaataaaa tagcaaatgc ggtaagtcat
    17041 gtagccgccg ttagcataca aagtcaaaaa attaaagatt tagaatttaa attaaataat
    17101 actaaagatg aaaaagaaat ttctacaatt agaaaagaaa tttcaatagc cactcaaaat
    17161 aaagttggaa atttacttaa tgcaattctt tgtgtgttct ttatgatagc taccttgctt
    17221 gttataattt cttgtatagg aatttgctta ggtaaaatta aaattcctct taaagaaact
    17281 aagtatatta agattgatga atttcaaaaa atttaagtat tattatgaaa aagccgaaag
    17341 gttttttcat cccttggtgg gactttctag ttatgataag tatttagaac acatgaaaca
    17401 aaaacatcca ggaaaaattc caaaaaccag aggggaattt ttcaaagaat gtctagataa
    17461 aaaatataat agtggcggtt taaataaatg ctgataagct taaaggataa agttttatca
    17521 tacaaaataa gctttaagca tttaaaaagc catgaattct tttaagttct tcactaatag
    17581 gatttttctt tccatctctt gtaacactta cataagttac taaagccgaa gttacattaa
    17641 tgcaagaagt acaaccttga gaatccactc tttgagctgt gacttctact tcaacgctga
    17701 ttgaagtgtt gcccacattt acaactttag agtaacaaga aattatatcg cctataaaaa
    17761 caggttcttt aaaaactact ttatccatag agatggttac aacgcgttca ggagaaagtt
    17821 ctcttgctgc gatagctcct gctaaatcga tttgtgaaag tatccatccg ccaaaaatat
    17881 ttcctgctgg atttgtgtca cttggcatag ctacaatttt taattttggt tctcccatat
    17941 ctctcatttt tactccttat tttaaaaaat gaattataat taaaaaagtt aaaaaggaga
    18001 ataaaagtat gaataatttt aaagaaatag ctaaattggt tagaaaatac aaagaaagaa
    18061 ataatgcgtt atatgagttt ttagacaaag aagatgtggg cgagtatttt agatctttga
    18121 tttctttaag tgagttaaaa caagataaaa caactatgct agccatactt aggcgtttga
    18181 ttgatttaaa agaagaaaat ttagttcaag agtggaaaaa aaacaacttt aaggaagata
    18241 agattataga gttaaaacat aagttctatg aagaggttag aaagttttat gaaaaagaac
    18301 atcaaaattt aattaatgaa ataaaagaga aaaaactttt aaataatttt tatcagtcct
    18361 taatacaagg agtgcataat ataggtttaa ttatgaatat ttttgaaatt tcttggacta
    18421 aagaaattat agaaaaaaat aataaaattt tatctactca atttccaaat ttagatgatg
    18481 caatggaatt tttacgtaaa aatcatttat atcaaaaaac tccagaagga gaaatttgtg
    18541 agcgaagcta tggtgtttta gttagaatag gaaatttatg gaaatttgtt ccttatgcga
    18601 gatttttcga gaatgaaatt ttaaaattag aatttgcttt tgaaaatatg attgatcagc
    18661 ttaaaatatt tgctagcagc gaagaggaaa aagcttatat agaatatttt gaaaaattaa
    18721 aattagcgtt ttgtgaaaaa gatgaagata gggttataaa agcttggcaa gaagctgaat
    18781 ttgcttggat gaaagtaaaa tcacctttac aagtgggaca tcctttagaa tattatgaag
    18841 ataattatac tcatgcggtg gcattagaat gggatataag aatagaagat gaaaatgatt
    18901 ttgatgtttt gaaatttggt aatgaaatta aggaaagttt tgaacatgtt tataaaaata
    18961 taggacttga agattgtgaa ttagaaaaag aagttttatc taatatagaa aaaactcaac
    19021 tttatatttg cactccgatg atattttatg gtgctgaact taaaggttta ttctcagctc
    19081 aagtcgttcc aaatgatgag tttgtaagtt ctaaggcggg caaaaaaata tttgccttta
    19141 taaattttgt atatgaaaat gctaaaacaa agccttttat gaaaatttct agcgaggttt
    19201 ttgataaaga atttttggat tttggaagaa atattttatt ttatcaggaa aaaatttgga
    19261 aaagggttta tgaagtatca actataggcc atgaatttgg tcatatattt tttattgcta
    19321 atgataccga aaaaacaatg aatcagagtg gtttttttaa aaatatagaa gaatataaag
    19381 ctactacagg tggacttata aatttctttt atcatgaaca agatgacttg ataatgcctg
    19441 tttttcatga acttataaaa agagctattg gacttatttc ttggcaaagg gttgatgaag
    19501 ttagacctta ttatacggaa ggacttattc atcttagctt gctttttgaa agcgaagtat
    19561 tgatttttga aaataataat ttgaagataa attttgattt agggtattat gaaaaattta
    19621 aagagctaac tttaaaaaat tatcatgaat tggcaaaaca ctatgcttta agacttgatg
    19681 caaaagagtt tttaagtaga ttttgtgaaa ttgaagataa tatttttctt cctattatgc
    19741 ctaagtgtaa agaatttgtt aaattttatt atgatttata cgagaaaatt ggtaatgaaa
    19801 ttgataatag tggagaattt gaaagatata agaaaaaata ataaagtttt ttgaaaaaaa
    19861 cttaaaaaaa gctgtttttt acttgatatt gttttttaaa tatgctaaaa ttaggcgttt
    19921 caattaaaac aaaggagctt ttatgactaa agcagatttc atttcattag ttgctcaaac
    19981 agctgggcta acaaaaaaag acgctactac tgctactgat gcagttattt ctactattac
    20041 tgatgtttta gctaaaggtg atagcatcag ttttattggt tttggtactt tttcaactca
    20101 agaaagagct gctagagaag ctagagtacc aagcacagga aaaacaatca aagttcctgc
    20161 tacaagagtt gcaaaattta aggtaggtaa aaaccttaaa gaagctgttg caaaagcaag
    20221 cggcaaaaag aaaaaataaa acttcggcta gataaattct agccttcttt cttaattaat
    20281 tcagatattt tgtatctttt atttacttta tttttttaaa cttttataaa actatcatta
    20341 ttaaacaaaa aaggatatta aaattatgaa agtacatgaa aaagtaagtg agcttatagg
    20401 aaatactcct attatacatt tgaaaaaatt tggtatcaat gtttttgcta aatgtgaatt
    20461 tttaaatcct agtcattcta taaaagatag agcagctttt gaaatgatta aagatgcttt
    20521 agatagtaaa aaaattaatc aagatactac aatagttgaa gcaactagtg gaaatactgg
    20581 aatttctttg gctatgattt gtgcagattt gggacttaaa tttattgctg taatgcccga
    20641 atctatgagt ttagaaagaa gaaaaatgat aacactcttt ggcgctaggt tagaattaac
    20701 tcctgcaaat ttaggaatga aaggagcggt tgataaagca aatgaaatat tattaaatac
    20761 tccaaattct tttatggttt ctcaatttga aaatatttca aataaaaatg cgcatcgtaa
    20821 gaatacggct ttagaaattt taagagattt ggataatgaa cttgatattt ttgtagctgg
    20881 ttttggaact ggcggtacta ttagtggagt tggggaaata ctaaaagaaa aattagaaaa
    20941 agtgcatatt gttggagtcg agcctctaaa ttctccattg cttagcaaag gtgaagcggg
    21001 aagccataaa atacaaggaa taggggcgaa ttttatacct gctattttaa ataaagaagt
    21061 tatagatgaa gtgatcacag taagtaatga agatgctata aatacagcca aagaacttgc
    21121 caaaagtggt ttaatggtag gtatatcaag tggagcaaat gtatttgccg caagtatgct
    21181 agcaaagaaa tttccagata aaagaatttt aactatgcta aacgatacgg ctgaaagata
    21241 cctctcaacc gatctttttg cttaagtata attattgaga atttagaaaa attctaagtt
    21301 ctcttaaaat ttcttgtgga tttaaatcgt taatttcttt ataaaaatga cctttttcat
    21361 caataagata aagcatattg ctatgtgcta tagaataacc cataaaagaa tcatttagat
    21421 ctattttttg atattgaaca ttatattgtt ttgttatttt ttgaagagtt ttttcatctt
    21481 ttgcaattaa ggcatctgct tttgggtaaa agtatcgtaa ccattcgttt gtattgctta
    21541 agttattatc tctatttgga tctaaagaaa taaaaagaag gtgagcctta ggattattga
    21601 tttgctttaa ggctttgcct actaaactaa gagttgccgg acaaacatca gggcaataag
    21661 tatatccaaa atagataata agcttatctc ctttaaaatc ttttagggtg gtttcctctt
    21721 ttaagtctga ttttaagata aaatcataag aattttgatg atttttaata aaaaatatta
    21781 cacctaaaat aatggcaact ataactataa acaaaataat attttttttc atttttttag
    21841 ctcaaaatca aaataaaacc ctatgggttt attattatcc ataaattcta ccctgaaacg
    21901 catagtatct aaaacgcaag cagcaagaac tattttactt tcatagtctg ttgaatttaa
    21961 tcgatgtatt ttaggtttaa tttcgcccat atacatattt aatccataaa ttttaattcc
    22021 taagttgtta taatttccta gatttacaat ctttagattt gtaacatcta aagattgtaa
    22081 gggtttggga tttagggaaa ttaagacttt tttattgtta aaactatatg tgcagtcttt
    22141 aacattaaga tcgcaagtca atggggtaga aaaatcagtt tttgttattt tttgagaatc
    22201 ttttattaca taaaaatcaa aaataatata taaaatagca ataacaaaag caaaagctag
    22261 gataaaaata atttttctca ttaattaaaa ttctttagaa tcaatatttt ttaactctat
    22321 ggttttgtga ttattaaatt ttaaatctaa atttaccttc gtgtctttaa taataggttt
    22381 ttttagtttt aaaagcatta tatggtaacc tccagattta agctctgtgc ttgaatgagc
    22441 ttttataata atttcaggaa ttttttgcat catcattttt ccatctttat gtatatgtgt
    22501 atgcagttca ctgacttcac tgatatcgct tttggcactt attagagcaa tatccttatt
    22561 agtattatta aaaatagtaa gaaaaatagc actattttgc gcatgaggtg gagtttgttt
    22621 tacaaaggca ttttttacct ctatatcatt aacagcccaa agatttacag caaaaagagc
    22681 acctaagaga agaatttttt tcatattgta tcctta
//
LOCUS       DAPIYB010000019        22711 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.019, whole genome shotgun sequence.
ACCESSION   DAPIYB010000019 DAPIYB010000000
VERSION     DAPIYB010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22711
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.019"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            51..980
                     /locus_tag="RJ318_000572"
     CDS             51..980
                     /locus_tag="RJ318_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2860 family protein"
                     /protein_id="HDV7430467.1"
                     /translation="MKKYLFSCVLASILTQSATAVEFQEGFSGNLSIGVGARDIKSNI
                     STLANSDYLSSHNADNSDSSFIPFIGAELYYGNLIDNDRIFIKNYNGRDISGIALGYE
                     RAYLERFSTSFSVISSLREKAYANPYAIGNREETDVDRYGFKISQLYESDFGKFTTSY
                     LFSKNKYDKDTIAQSSLKREGYYHEIELNYNYSLLNLGLNYDYNDADGKAQSYSRYGF
                     SIGTNLAFANDYIFTPNLNLSKYEAVGTDPIFHKKQDGNIVKLNLKVVKNQFLGYNGL
                     YGFANYGIEKRNSDIGFYDETYQIVLTGIGYKF"
     gene            complement(1028..2356)
                     /locus_tag="RJ318_000573"
     CDS             complement(1028..2356)
                     /locus_tag="RJ318_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDV7430468.1"
                     /translation="MSSIFSTLSPFRLFVKYAVPNVISMAFISFYYIVDGIFVGKYLG
                     SDALAALALIIPFIMMSFALADMIAIGSAVQISMHLGLGKKNLARKIFSSSMLIIFII
                     SCFIGILEYFLGPVLIDCLNVSDEIKTMTKECMFVFALFAPFTMLSFALDNYLRICGK
                     TAYSMVMNVIIALSNIVLDYIFIVELGWGLFSAALATCLGLVLGGIFGIFPFLFQNLE
                     LKISSLYMNLKIFKNILYNGSSEFFGNISGSLYSIFANFVLLKISDTQAVAAFSIVLY
                     IDSFIIMLIIAIGDAMQPALSYNYAKKDFSRIKAIIKVVFFAGGFLSLFSIVLILIFG
                     ENLITLFTKENNQEFKTFAYTALMLFAFNYFFAWFNVLSGSFLTAFNKASFSLVLSLA
                     QNLFIPLFFLLFLSCFMGLNGVWLSPFFAEFCVLILAWIFLKRIFKDLSL"
     gene            complement(2537..3472)
                     /locus_tag="RJ318_000574"
     CDS             complement(2537..3472)
                     /locus_tag="RJ318_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HDV7430469.1"
                     /translation="MKKIDLIVVGAGPTGIGCAVEAKLKNKEVLILEKSNNICQTLMQ
                     FYKDGKRVDKAYKGCEGTNHGHVPFEDGTKESTIETFQNALKEHNIEVEFGSEVESVK
                     NENGVFLVSTAKGVYECKNIIVAIGRMGKPNKPDYKLPMTLTKIINFNANSVLGNEKI
                     LVVGGGNSAAEYAVDLANSNQVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGID
                     INEVEDDNGKAKVNFTDGTSDIYDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENK
                     QSNVKGIFVAGDIATKNGASIVTGLNDAVKILSVL"
     gene            3543..4775
                     /locus_tag="RJ318_000575"
     CDS             3543..4775
                     /locus_tag="RJ318_000575"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDV7430470.1"
                     /translation="MRNLLENIKKNSQKLLNLTPKDKEKIILKLAQILRENFKIILEA
                     NKKDMANFTKSGAMKDRLLLDEKRILALCEGLEKIAYIEDPIGKISKGWKNYAGLSIQ
                     KMSIPLGLICVIYEARPSLSAEIAALMIKSSNACVFKGGSEAKFTNEAIFTLVNKVLK
                     EFDLQDCFAMFTQRDEILQILAFDDLIDVIIPRGSSNMIQEIANNTKIPLIKQNKGLC
                     HAFVDQSANLDMALKIILNAKCQRVSVCNALETLLIHEKIAKNFISLLIPEFEKFKVK
                     IHAHENALAYFNNSNLKIFKANENTFDTEWLDFALSVKLVKDCDEAIEHINKHSSLHS
                     ETIISNDASNIAKFQRLINSSCIYANASTRFSDGGEFGFGGEVGISTSKLHARGPMGI
                     EDICTYKYIINGEGQIRE"
     gene            4772..5857
                     /locus_tag="RJ318_000576"
     CDS             4772..5857
                     /locus_tag="RJ318_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDV7430471.1"
                     /translation="MNKIEILKQHFKEIAKLNSSEQVWQMPFFAALGVGIVLGLSVFF
                     GKLNYGLIAMIGALSFLYVPSTPLYHRMAVVMCCSFGIVSSFFLGILTHFLPAIFAFI
                     PIGIMAMGSSILIRYYNIGAPGYFFFVFSCVLGAYSPFEAKDFIFLVGLVFLGAMVAN
                     LMALLYSIVVIYGFKNALPSEIPPREYIGFDAVFVDSLIMGSFVAFSIFIGTFLELER
                     SYWIAISCTAIMQGVTLNSIWIKQIQRIIGTALGVCFAWWLLSKQFHDIELILLMMSL
                     FFIGQFLVNRNYALAMIFFTPYATYLSEAANFMSENADKLILARLIDVVIGSILGLLG
                     GFVIYKPYLRVHFERIAKYIFRIKQKA"
     gene            complement(5854..6651)
                     /locus_tag="RJ318_000577"
     CDS             complement(5854..6651)
                     /locus_tag="RJ318_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDV7430472.1"
                     /translation="MKIDTHAHIFLKKLNTVANARYKPDYDASFKDYKANLDHYDFNK
                     GVLVQPSFLGIDNEFLLQSIEKDENIKAIVVVDENIKFDELKKLKERKACGVRLNLIG
                     KELPNFKSMVWTQFFENLSKLKMQIEIQRDLDNNLVDIVENLIPYGCNIVIDHLARAN
                     ANLTNLEDLICLKNSRIFFKISGFYRAKIDYANNEQAVKFAKKIYEILKEHFPLSNFV
                     FGSDWPHTNFEANINFSSALVAFNEVVVSKKEQEQILGDNACALFGF"
     gene            complement(6662..7954)
                     /locus_tag="RJ318_000578"
     CDS             complement(6662..7954)
                     /locus_tag="RJ318_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDV7430473.1"
                     /translation="MIMVFLIISSIIVAIILGYITRHNVGIFAMIFAYIIGAFFMDLA
                     PKKIIAFWPISIFFVIFAVSLFYNFATVNGTLEKLAGHLMYRFANHPYLLPFVIFVVS
                     AIIAALGAGFYTVLAFMAPLTFLLCDKIGLSKIAGAMAINYGALGGANFITSQSGIIF
                     RGLMENSGIEANEAFANSSIIFAFTIILPIVVLSFFVFNAFKNNIKISVISKPDPFDY
                     KQKTTLILMFMMIVVVLIFPVLNIIFPHNETISYFNKKIDIAMIAMIFVAIALFLKLA
                     DEKQVVALIPWGTLIMICGVGMLISIAVEAGAIKLFSDLVENEINVIFIPLIMCAIAA
                     FMSLFSSTLGVVTPALFPIVPSIAASSGLSEALLFSCIVVGAQASAISPFSSGGSLIL
                     GSCPDKYKEKLFKDLLIKAVPIGFIAAILATIIMSFIL"
     gene            complement(8073..9077)
                     /locus_tag="RJ318_000579"
     CDS             complement(8073..9077)
                     /locus_tag="RJ318_000579"
                     /inference="COORDINATES: protein motif:HMM:NF022646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 domain-containing protein"
                     /protein_id="HDV7430474.1"
                     /translation="MEKFIKQFSFIALENIFRELPNKITHSFNDINDIKPPKLMYPIF
                     YGSYDWHSSVHSHWLLVKILKDFSHFAPKDEIIKALDSQFSKEKAEGELKYLQNPAHK
                     GFERPYGWGWFLKLTLEINLLTKENDKAEIWAKNLEGIADFFVKEFKEFLPKMDYPIR
                     VGTHFNSSFALYFALEYARFKKDQELEYCIIQSAKKWFLNDKNMQALEPCGDEFLSPV
                     LMEAVLLSAVLHKNDFVKFFKAYLPNLEAKEPATLFTPVSVSDRSDGKIAHLDGLNLS
                     RAWCFKILSNFCDENLKILLRNNATEHFDKAIAHIEDDYLGSHWLGSFALLALDVDIL
                     "
     gene            complement(9087..10040)
                     /locus_tag="RJ318_000580"
     CDS             complement(9087..10040)
                     /locus_tag="RJ318_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF979 domain-containing protein"
                     /protein_id="HDV7430475.1"
                     /translation="MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYS
                     FTFLLAGVLPHFVMGCIVILLALIAGFNLLKPAKIEVSKEEKEYEIKHANIYKNKLFI
                     PALMVPLITLIGTFLFPYLSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDA
                     AHTMDHISWAALLPQILATLGVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMA
                     LFTIVMGNAFAAFPVITAAIALPILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFN
                     IVPAALLNLDDKNGVIKAQFMSGLVLLVANIFLMYFLAFRF"
     gene            complement(10027..10719)
                     /locus_tag="RJ318_000581"
     CDS             complement(10027..10719)
                     /locus_tag="RJ318_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF969 domain-containing protein"
                     /protein_id="HDV7430476.1"
                     /translation="MEWLLLASIPLIVLGFALKINPFLVVTSVGIYAGLVSGFDFVKV
                     VSDIGKSFVDNRYVAIIWLILPLLAVLERKGLREQAKNLISKIKVASTGRILMCYFVF
                     RQVTAALGLLSLGGHAQMIRPLIAPMAEAAAKLKFKNLTHKDSQKIKAFSAGTDNVAV
                     FFGEDIFIAVHSILFIKAFYESNGIIVEPLHLSVWAIPTGILALIIHCSRLYLFDKRL
                     EKTYKGLSDDKS"
     gene            complement(10879..11448)
                     /gene="efp"
                     /locus_tag="RJ318_000582"
     CDS             complement(10879..11448)
                     /gene="efp"
                     /locus_tag="RJ318_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDV7430477.1"
                     /translation="MASYSMGDLKKGLKIEIDGIPFKIVEYQHVKPGKGPAFVRIKIK
                     SFIDGKVLEKTFHAGDKCEAPNLEDKTMQYLYDDGENCQFMDTQTYEQVAISDDDVGE
                     AKKWMLDGMMVDVLFHNGKAIGVEVPQVVELKIIETAPNFKGDTQGSNKKPATLETGA
                     VVQIPFHVLEGEVIRVDTVRGEYIERANK"
     gene            11562..11882
                     /gene="rnpB"
                     /locus_tag="RJ318_000583"
     ncRNA           11562..11882
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="RJ318_000583"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(11880..12155)
                     /locus_tag="RJ318_000584"
     CDS             complement(11880..12155)
                     /locus_tag="RJ318_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430478.1"
                     /translation="MKQWLSDFKLALIQEDVNKLENLLDELDMKAFIKNLAKESPSED
                     FLKENANDVFYQVQALLQEAVILIEQKKKTKAVEIQKFQKALTYFKS"
     gene            complement(12136..12522)
                     /gene="fliS"
                     /locus_tag="RJ318_000585"
     CDS             complement(12136..12522)
                     /gene="fliS"
                     /locus_tag="RJ318_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HDV7430479.1"
                     /translation="MQNNLAYNAYSQNQVGIESPQKLIEMLYEGILRFCARAKVAIRN
                     EDIEQRVYFVKRTTAIFIELINTLNYEKGGEVAHYLSGLYTREIQLLSLANLENNEDR
                     INEVINVTKGLLEAWREVHNNETVAQ"
     gene            complement(12534..14462)
                     /gene="fliD"
                     /locus_tag="RJ318_000586"
     CDS             complement(12534..14462)
                     /gene="fliD"
                     /locus_tag="RJ318_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HDV7430480.1"
                     /translation="MAFGSLSSLGFGSGVLTQDTIDKLKEAEQKARIDPYTKKIEENT
                     TKQKDLTEIKTKLLSFQTAVSSLADATVFAKRKVVGSISDNPPASLTVNSGVALQSMN
                     INVTQLAQKDVYQSKGLANDGGFVNAQLNGTADLTFFSNGKEYTVTVDKNTTYRDLAD
                     KINEASGGEIVAKIVNTGEKGTPYRLTLTSKETGEDSAISFYAGKKDSNGKYQKDINA
                     EKIFDDLGWGLDVSASIDPDKDKKGYGIKDASLHIQTAQNAEFTLDGIKMFRSSNTVT
                     DLGVGMTLTLNKTGEINFDVQQDFEGVTKAMQDLVDAYNDLVTNLNAATDYNSETGTK
                     GTLQGISEVNSIRSSILADLFDSQVVDGTTEDANGNKVNTKVMLSMQDFGLSLNDAGT
                     LSFDSSKFEQKVKEDPDSTESFFSNITKYEDINHTGEVIKTGSLSKYLNSNGGNTNGL
                     EFKPGDFTIVFNNQTYDLSKNSDGTNFKLTGKTEEELLQNLANHINSKGIEGLKVKVE
                     SYNQNNVTGFRLNFSGDGSSDFSIKGDANILKELGLSDVNITSKPIEGKGIFSKLKAT
                     LQEMTGKDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYDTMANQWLQYESILNKLN
                     QQLNTVTNMINAANNSNN"
     gene            complement(14465..14830)
                     /gene="flaG"
                     /locus_tag="RJ318_000587"
     CDS             complement(14465..14830)
                     /gene="flaG"
                     /locus_tag="RJ318_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella length regulator FlaG"
                     /protein_id="HDV7430481.1"
                     /translation="MEISKANGQMDTALANISQRTSETQASLNIQTDRSQGQEGDDGQ
                     QRGVSEKLADITKKLNEQMDSLDTNVRFGYSDKIGSMYISVTEKSTGREIRQIPSEEA
                     MRLAEYFRDVIGMIFDKES"
     gene            complement(14988..16790)
                     /locus_tag="RJ318_000588"
     CDS             complement(14988..16790)
                     /locus_tag="RJ318_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HDV7430482.1"
                     /translation="MKEFIQILKENDLLRVIEEPVDVDLEIAHLAYIEAKKGEKGKAL
                     LFKNPIDKKLNKQYKFPVLMNTFCNEKALNLAFGRDYEEVAEEISKLTKLHIPTSFKA
                     KMDFFMNLLSFKNIPPKRLKKNKALYDYEILNSLEELPILKTWEDDAGKFITMGQVYT
                     QNLDKTQNNLGMYRLQMSDKNELLIHWQIHKDGANFYHEYKNAGFKKMPVSIAIGGDP
                     LYIWCSQAPLPKGIFELLLYGFIKKTPAKITPCENGIFVPYDSDVVIEGYVDLEEFKI
                     EGPFGDHTGFYTPAELFPVMKVEKIYAKKDAIYQATVVGKPPLEDKIMGLGTERIFLP
                     LFQTSVPDLIDYNMPENGVFHNLILAKIDAKYPAHAQQIMHAFWGVGQMSFVKHAIFV
                     DKNAPSLKDYDALIPYMLDRFNTKKILISEGICDQLDHASPNSCFGGKAGLDACEEIQ
                     VEELEILEDEKLLELFKTKVELLNLKQFYKESKSPIVCILLDKKEKIEQSFDKLLEFK
                     KHFRILVFLDAENKLENSYMLVWRVVNNIDAKRDIFIKEERLGVDASAKGEAEGYLRA
                     WPKQTDCTKSVIEDLILRNILENNPDLFNKFEIF"
     gene            complement(16787..17710)
                     /gene="hemC"
                     /locus_tag="RJ318_000589"
     CDS             complement(16787..17710)
                     /gene="hemC"
                     /locus_tag="RJ318_000589"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDV7430483.1"
                     /translation="MKLIIATRKSQLALWQSEHVAQILKNTHQIEVLLEGFKTKGDVL
                     LDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSND
                     AMLSQNYKDFLSLPKGAKIGTTSLRRKMQLLLLRPDLDIISLRGNVNSRIEKLKNNDF
                     DAIILAMAGIKRLNLDKQVNFVYEFSKDELIPAASQGALGIESINDEKILELLKCLND
                     ENALIETSIEREFIATLEGGCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIK
                     KNDFKGFGESLAKEFIAKGAKELLKKAESMI"
     gene            complement(17707..18096)
                     /locus_tag="RJ318_000590"
     CDS             complement(17707..18096)
                     /locus_tag="RJ318_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HDV7430484.1"
                     /translation="MNYKLSLSPLFVLEIIASILFIVFFGFGNFLFFILLSMIFGAVL
                     LGIFWKNMLEFQMGGLKDMLTQFSFVIAGFLLVFPGIITSVFGIFVFFFGIALKLITK
                     SKYQYTKQEYQNSNEEIIDVEIIEDRK"
     gene            complement(18093..19802)
                     /locus_tag="RJ318_000591"
     CDS             complement(18093..19802)
                     /locus_tag="RJ318_000591"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDV7430485.1"
                     /translation="MMRFTKFYAPSLKEAPKDASLPSYIFLTRAGFVEQIGSGLYNFL
                     PLGKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKE
                     NEFVLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKD
                     GYSFHANEEDLGREFELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNG
                     EDDILICENCDYAANVEAAKRAKKTCQDERPEANYASKFHTPNIKTIDSLAQFFKINA
                     FYTIKAVVKKAIYENESKLVVFFIRGSDDLQEVKAQNACSALELVDASEEELEKAGLV
                     AGFIGFVGLKDIDFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKE
                     GDCCVKCGAKLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSR
                     LLAVATEASHDEKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLL
                     DDRNERFGVKMNDFELMGFPYALVVGKGLEKNEIELIQREGLIKELIKTDELMEILKK
                     KVL"
     gene            complement(19786..21084)
                     /locus_tag="RJ318_000592"
     CDS             complement(19786..21084)
                     /locus_tag="RJ318_000592"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDV7430486.1"
                     /translation="MYYCISFTHKNTDIALREKLSFSNEAKKSEFLKIISTHENIEEC
                     LVISTCNRVEIVAFVKMACAEFIVKSLALLCDVDKDILLEKADIFEDSGAIHHLFSVA
                     SSLDSLVVGETQIAGQLKDAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNS
                     ISVASVAVAKAKELADLTQKKAVVIGAGEMGELAAKHLIAAGAKVIILNRDLQKAKDL
                     CERLGVLSEYDSLENLKKYLNQYEFFFSATNAPNAIITNSLIEELSYKRYFFDIAVPR
                     DIDINENENISVFAVDDLEIVVQKNLALREQEARMAYGIIGRETSEFFRYLNDLALMP
                     IIKAIRLQAKEYADKQLEIALKKGYLKKSDKEEARKLIHQVFKAFLHTPTVNLKHLQG
                     KMQSDTVINAMRYVFDLQNNLEGLNQYKCEFDMENNDEIY"
     gene            complement(21084..21977)
                     /locus_tag="RJ318_000593"
     CDS             complement(21084..21977)
                     /locus_tag="RJ318_000593"
                     /EC_number="2.5.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexaprenyl-diphosphate synthase"
                     /protein_id="HDV7430487.1"
                     /translation="MQKIDELIKQFLQELGYEPILNMLSNVKSGKKLRSKLLLTIADE
                     SEIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAF
                     YELSKMDARFASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASA
                     RCGAILAGLYEKDFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPY
                     IYLYENLQEQDRIYLQTLFKKDLNENEKEWLKTKFEEQKALEKAILEAKTYAKKARKA
                     IEKYDNNKLNDIIKAMIDREF"
     gene            complement(21991..22527)
                     /locus_tag="RJ318_000594"
     CDS             complement(21991..22527)
                     /locus_tag="RJ318_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exporting protein"
                     /protein_id="HDV7430488.1"
                     /translation="MFKISPCLICIFFIFSNVLASEPTFDYTYKFILKKDERASVQIK
                     EIGYEDKVQNFDFYWTLFDNTNIIVHSKFRKYPRQFVMSLRRNLDWVTQTLIPDYTNP
                     HIDRARLILEFSGYNKGLATFTVYIEDKESRLMVEFLDPRKKALQNPPQNNQVVPMIN
                     FNEPQVKPLTSKENNNSN"
     gene            complement(22530..>22711)
                     /locus_tag="RJ318_000595"
     CDS             complement(22530..>22711)
                     /locus_tag="RJ318_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2018 family protein"
                     /protein_id="HDV7430489.1"
                     /translation="EKVFEEFFADHIAMVELLEKQGLTEMDVKNFILENGDFIEERQN
                     DIYIELGAKILGHEG"
BASE COUNT         7943 a         4095 c         2827 g         7846 t
ORIGIN      
        1 aattataaat gtaatttaat tacaaacaac aaacatttca aggagaacat ttgaaaaaat
       61 atttattttc ctgtgtttta gcctccattt taacccaatc agctacggct gtagaatttc
      121 aagaaggttt tagtggaaat ttaagcatag gtgtgggtgc aagggatatt aaaagtaata
      181 tttcaacctt ggcaaacagt gattatctaa gcagtcacaa tgctgataat tcagactcct
      241 ctttcattcc ttttatcggt gcagaacttt actatggtaa tcttatagat aatgatagaa
      301 tttttattaa aaactacaat ggaagagata tcagcggtat agctttaggc tacgaaagag
      361 cttatttaga gcgttttagc acttcttttt ctgtaatttc ctctttaaga gaaaaagctt
      421 atgcaaatcc ttatgcaata ggaaatagag aagaaactga tgttgataga tatggtttta
      481 aaatctctca actttatgaa agtgattttg ggaaatttac cacttcatat ttatttagca
      541 aaaacaaata tgataaagac actatcgcac aaagctcttt aaaaagggag ggatattatc
      601 acgaaattga attaaactat aattatagct tattaaacct agggttaaat tatgattaca
      661 atgatgcaga cggaaaagct caaagctatt caagatatgg ttttagtata ggaacaaatt
      721 tggcttttgc taatgattac atcttcactc caaatttaaa tcttagcaaa tatgaagcag
      781 taggaactga tcctatcttc cacaaaaaac aagatggtaa tatagttaag cttaatttaa
      841 aagttgttaa aaatcaattt ttgggttata acggacttta tggttttgca aattatggca
      901 tagaaaaaag aaatagcgat ataggatttt atgatgaaac ctatcaaatt gtcctaactg
      961 gtataggata taaattctaa aaattacaaa aaagctcctt tgataaaatt taaaaaagat
     1021 ctatctccta taaagataga tctttaaaaa ttcttttaag aaaaatccaa gctaaaatca
     1081 aaacacaaaa ttcagcaaaa aatggactta gccatactcc atttaaaccc ataaaacaag
     1141 ataaaaacaa aagaaaaaac aaaggtataa ataaattttg cgccaaactt aaaaccaaag
     1201 aaaagcttgc cttattaaaa gctgtcaaaa aagaaccact tagaacatta aaccatgcaa
     1261 aaaaataatt aaaagcaaaa agcatcaaag ctgtataagc aaaagtttta aattcttgat
     1321 tgttttcttt tgtaaaaagc gtgattaaat tttctccaaa tatcaatata agcactatag
     1381 agaataaaga taaaaatccc cctgcaaaaa ataccacttt tataatagct ttgattcttg
     1441 aaaaatcttt tttagcatag ttgtaactaa gcgcaggctg cattgcatca cctatagcaa
     1501 taataagcat tataataaaa ctatcaatat ataaaactat agaaaaggct gccacggctt
     1561 gagtatcaga aatttttaat aaaacaaaat ttgcaaaaat actatacaaa gatcctgaaa
     1621 tattgccaaa aaactcactg cttccgttat aaagaatatt tttaaaaatt tttaaattca
     1681 tatataggct cgaaatttta agctctaaat tttgaaacaa gaaaggaaaa attccaaaaa
     1741 taccacctaa aacaagtccc aaacaagttg caagagcagc tgaaaataag ccccaaccca
     1801 actcgactat aaaaatataa tcaagcacta tattgcttaa tgctataatc acattcatta
     1861 ccatactata agcagttttt ccgcaaattc ttaaataatt atccaaagca aaagaaagca
     1921 tagtaaaggg tgcaaacaaa gcaaaaacaa acatacattc tttagtcatc gttttaatct
     1981 catcgctaac atttaaacaa tcaatcaaaa caggtcctaa aaaatactcc aaaattccga
     2041 taaaacaaga gattataaag ataatcaaca tacttgagct aaatatcttt ctagctaaat
     2101 tcttcttgcc taaacctaaa tgcatagaaa tttgcactgc tgatcctatg gctatcatat
     2161 cagccaaagc aaaagacatc atgataaagg gaataatcaa ggctagtgcc gctaaagcat
     2221 cacttcctag atattttcca acaaaaattc catcaactat ataataaaaa gaaataaaag
     2281 ccatgcttat aacatttggc acggcatatt ttacaaaaag cctaaaaggg cttaaggtgc
     2341 taaaaatact tgacataata atccttaaaa tatttaaaat taaaaatatt ttaaaccgct
     2401 aataaaatgc caaaagtcct agtatgtaag aatttaaata aagtaatttc gcaataagtt
     2461 tattaatatt tattttattt tgcatatgaa ttttctagat taaactaaaa taaaaattta
     2521 gcccaaaggc taaattttaa agcacagaaa gaattttcac agcgtcattt aaccctgtaa
     2581 ctatacttgc tccattttta gtagcaatat ctcctgctac aaagatgcct ttaacattgc
     2641 tttgtttgtt ttcatccatt aaaggcacgc ctttatcatc aacattaatc ccacattttt
     2701 gtaaaaaatc aagtggagta gaaccaccaa tagcataaat gattctatcg taaatatcgc
     2761 ttgtaccatc ggtaaaattt actttagctt tgccattatc atcttctact tcattaatgt
     2821 caattcctag ttttaactct accttacccg aatttccagc ttcgtgaata tctttaagat
     2881 ttatatcatt taatcttgta aattcttttt tacgataaca aaggctaact tgatttgaat
     2941 ttgccaaatc cacagcgtat tctgctgctg aatttccgcc acctacaaca agaatttttt
     3001 catttcccaa aactgaattg gcattaaaat taatgatttt tgttaaagtc ataggaagtt
     3061 tgtaatcagg tttattaggt ttacccattc tacctatagc aacaataatg tttttacact
     3121 cataaacacc tttagctgta cttactaaaa aaactccatt ttcattttta acgctctcaa
     3181 cttcagaacc aaattcaact tctatattgt gctcttttaa agcgttttga aaagtttcta
     3241 tagtgctttc tttggtgcca tcttcaaaag gaacatgtcc gtgattggtt ccttcgcatc
     3301 ccttataagc tttatctact cttttgccat ccttataaaa ttgcattaaa gtttgacaaa
     3361 tgttatttga tttttctagt atcaaaactt ctttgttttt aagcttggct tcaactgcac
     3421 agcctatccc tgttggacct gcacctacta caattaaatc tatttttttc atttatattt
     3481 acctttcaat tctaaatttt tttgtataat ttatcaagtt ttttgtaaat aaaggattaa
     3541 aaatgcgaaa tttgcttgaa aatattaaga aaaattctca aaaactactt aacttaacac
     3601 ccaaagataa agaaaaaatt attctaaaat tagctcaaat tttaagagaa aatttcaaaa
     3661 ttatcctaga agcaaataaa aaagatatgg caaatttcac aaaaagcgga gcaatgaaag
     3721 ataggctttt gttagatgaa aaacgtattt tagctctttg cgaaggccta gaaaaaatcg
     3781 cttacatcga agatcctata ggcaaaattt ctaaaggctg gaaaaattat gcgggtttga
     3841 gcatacaaaa gatgagtatt cctttaggac tcatttgtgt tatttacgaa gcaaggccta
     3901 gtcttagcgc tgaaatcgca gctttaatga taaaaagttc caatgcttgt gtatttaaag
     3961 gcggaagtga agcaaaattt acaaatgagg ctatatttac tcttgttaat aaagtactta
     4021 aggaatttga tttgcaagat tgttttgcta tgtttaccca aagagatgaa atcttgcaaa
     4081 ttctagcctt tgatgattta atcgatgtga tcatacctcg cggaagttca aatatgatac
     4141 aagaaattgc aaacaatacc aaaattcctc tcattaagca aaataaaggc ttgtgtcatg
     4201 cttttgtaga tcaaagtgct aacttagata tggctttaaa aataatcctt aatgcaaagt
     4261 gtcaaagagt aagtgtttgt aacgctttag aaacgctttt aatccatgaa aaaattgcta
     4321 aaaattttat aagtctttta atacctgaat ttgaaaaatt taaggtaaaa attcacgccc
     4381 atgaaaatgc tttggcttat tttaacaact caaatttaaa aatttttaaa gcaaatgaaa
     4441 atacctttga tacagaatgg cttgattttg ctttaagtgt aaaattagta aaagattgcg
     4501 atgaagctat agagcatatc aataaacaca gctccttgca ttctgaaacc attatctcaa
     4561 atgatgcttc aaatatcgct aaatttcaac gccttataaa ctcatcttgt atttatgcta
     4621 atgcttcaac gcgttttagc gatggaggag aatttggctt tggtggagaa gttggaattt
     4681 caaccagcaa attgcatgca agaggtccta tggggattga agatatttgc acttataaat
     4741 atataatcaa tggggaagga caaattcgag agtgaataaa atagaaatac taaagcaaca
     4801 ctttaaagaa attgctaaat taaattcaag cgaacaagtt tggcaaatgc ctttttttgc
     4861 ggctttaggc gtaggtatag ttttagggct tagtgtattt tttggaaaat taaactatgg
     4921 actcattgcc atgataggag ctttgtcttt tttatatgtt ccaagcactc ctttatatca
     4981 tagaatggct gttgtgatgt gctgttcttt tggcatagtt tctagttttt tcttaggaat
     5041 tttaactcat tttttgcctg caatttttgc cttcatccct ataggaatta tggccatggg
     5101 aagttctatt ttaattagat actataacat tggtgcacct ggatattttt tctttgtatt
     5161 ttcttgtgtt ttaggagcct attctccttt tgaagctaag gattttatct ttttagtagg
     5221 tcttgttttt cttggagcaa tggtagctaa tttaatggct ttgttatatt ctatcgttgt
     5281 gatttatgga tttaaaaatg ctttacctag cgaaattcca cctagagaat acataggttt
     5341 tgatgcagtt tttgtggatt ctttgatcat gggttctttt gtggcttttt ctatatttat
     5401 aggaactttt ttagaacttg aaagaagtta ttggatagcc atttcttgca cagctattat
     5461 gcaaggtgta actttaaatt ctatatggat taaacaaatt caacgcatca taggaacggc
     5521 cttaggagta tgttttgcat ggtggctttt atctaaacaa tttcacgata tagagcttat
     5581 tttacttatg atgtctttgt tttttatagg acaattttta gtcaatcgaa actatgcttt
     5641 agctatgatt ttctttactc cttatgctac ttatctttcg gaagcagcta attttatgag
     5701 tgaaaatgca gataaattaa tactcgctcg tttaattgat gttgtaatag gaagcatttt
     5761 agggctttta ggtggttttg tgatttacaa accttatcta agagtgcatt ttgaacgcat
     5821 tgcaaaatac atctttagga taaaacaaaa agcttaaaag ccaaataaag cacaagcatt
     5881 atcccctaaa atttgctctt gttctttttt agatacgaca acttcattaa aagccactag
     5941 agccgatgaa aaattaatat ttgcttcaaa atttgtatgt ggccaatcgc ttccaaaaac
     6001 aaaattgcta agtggaaaat gttcttttaa aatttcatat attttctttg caaattttac
     6061 agcttgttca ttattagcat agtctatttt tgctctataa aaaccgctaa ttttaaaaaa
     6121 tattctagag ttttttaagc aaattaaatc ctctaaattt gttaagtttg cattagctct
     6181 tgctaaatga tcgataacaa tattacaacc ataaggaatt aaattttcaa caatatcaac
     6241 aagattatta tctaaatctc tttgaatttc tatttgcatt ttaagcttac ttaaattttc
     6301 aaaaaattga gtccaaacca tacttttaaa atttggtaat tctttgccaa ttaaatttaa
     6361 tctaactcca caagcttttc tttcttttag ttttttaagc tcatcaaatt taatattttc
     6421 atcaaccaca actatagctt ttatattttc atctttttct atactctgaa gcaaaaattc
     6481 attatcaata cctaaaaaac ttggctgaac taaaacccct ttattaaaat cataatgatc
     6541 taaatttgct ttataatctt taaaactagc gtcataatca ggcttatatc ttgcatttgc
     6601 aaccgtattt aactttttca aaaatatatg tgcgtgagta tcaatcttca ttaaattatc
     6661 cttataaaat aaaactcatt ataatagtag ctaaaatcgc cgctataaat cctataggca
     6721 cagctttaat aagtaaatct ttaaataatt tttccttata tttatcaggg caagatccta
     6781 aaattagact tcctccagaa gaaaaaggag aaatagcaga agcttgagcc cctacaacaa
     6841 tacaagaaaa aagcaatgcc tcgcttaatc cactgcttgc agcaatgctt ggaactatag
     6901 gaaaaagcgc tggagtaacc acacccaaag tacttgaaaa aagcgacata aaagctgcaa
     6961 tagcacacat tattaacgga ataaaaatca cattgatctc attttctaca agatctgaaa
     7021 ataattttat agcccctgct tcaactgcta tgctaattaa catccctact ccacaaatca
     7081 ttatcaaggt tccccaagga attaaagcaa caacttgttt ctcatcggcc aattttaaaa
     7141 ataaagcaat ggcaacaaaa atcatggcta tcatggctat atctattttt ttattaaaat
     7201 aactaattgt ctcattatgt ggaaaaataa tatttagcac aggaaagatt aaaacaacaa
     7261 caatcatcat aaacatgaga attaaagtag ttttttgttt ataatcaaat ggatcaggtt
     7321 ttgaaataac actaattttt atattatttt taaaagcatt aaacacaaaa aaagataata
     7381 ccacaatagg caagattata gtaaaagcaa aaataatact agaatttgca aaagcttcat
     7441 ttgcttcaat gcctgaattt tccatcaatc ctcgaaaaat aatcccgctt tgagaagtta
     7501 taaaatttgc tcctcccaaa gcaccataat ttatagccat agctccagca attttgctta
     7561 aaccgatttt atcgcaaagt aaaaaagtaa gtggtgccat aaaagctaaa actgtataaa
     7621 aacctgctcc taaagcagct ataatagcac taaccacaaa aataacaaaa ggaagcaaat
     7681 aaggatgatt agcaaaacga tacatcaaat gtccagctaa tttttcaaga gttccattta
     7741 cggttgcaaa attataaaac aatgagacag caaaaataac aaaaaatata gaaataggcc
     7801 aaaaagctat gattttttta ggagctaaat ccataaaaaa agctcctata atataagcaa
     7861 aaatcatagc aaaaattcca acattatgtc tagtaatata gcccaaaata atagccacta
     7921 taatactaga gatgattaaa aaaaccatta tcatccttta aaatattata gggcttataa
     7981 tatcaaaaaa tatatttttc aaagcataaa aacaaaatct aaatttaaaa aatatctatt
     8041 tagcaacaaa tttactcatc ttatgaaatt ttttataaaa tatccacatc cagagcaagc
     8101 aaagcaaagc ttcctagcca atgcgaccca agataatcat cttctatatg agctatagct
     8161 ttatcaaaat gctctgtagc attgtttctt aaaagaattt ttaaattttc atcgcaaaaa
     8221 tttgaaagta ttttaaaaca ccaagcacga cttaaattta acccatctaa atgtgctatt
     8281 ttaccatcgc tcctatcact cacactcaca ggggtaaata aagttgcagg ctcttttgct
     8341 tctaaatttg gcaaatatgc tttaaaaaat tttacaaaat catttttatg taaaacagca
     8401 cttaaaagca ccgcttccat caaaacagga gataaaaact catctccaca aggctctaaa
     8461 gcttgcatat ttttatcatt taaaaaccac tttttagcac tttggatgat gcaatactcc
     8521 aattcttgat cttttttaaa tcttgcatat tctaaagcaa aatacaaagc aaaagagcta
     8581 ttaaaatggg ttccaactcg tataggataa tccatcttag gtaaaaactc cttaaattct
     8641 ttaacaaaga aatcagctat gccttctaaa tttttagccc aaatttcagc tttgtcattt
     8701 tctttagtaa gtaaatttat ctccaaagtc agttttaaaa accatcccca tccataaggt
     8761 ctttcaaaac ctttgtgtgc agggttttga agatatttaa gctctccttc tgctttttct
     8821 ttgctaaatt gagaatctag agctttgatg atttcatcct ttggagcaaa atgagaaaaa
     8881 tcttttaaaa ttttcaccaa aagccagtga gaatgcacgc tagaatgcca atcataagaa
     8941 ccataaaata taggatacat aagttttggc ggtttaatat cattgatatc attaaaagaa
     9001 tgtgtaattt tatttggcaa ttctctaaaa atattttcta gtgcaataaa gctaaattgt
     9061 tttataaatt tttccattgt ttctccttaa aatctaaaag ctaaaaaata cattaaaaag
     9121 atattagcca caagcaaaac aagtcctgac ataaactggg ctttaattac gccattttta
     9181 tcatccaaat ttaaaagtgc cgcaggaact atattaaaat ttgcagccat aggcgtcatt
     9241 aaagttccgc aaaatccact aagcattcca atcgctccta taatagcagg atttgcatgc
     9301 atttgtatga ttaaaatcgg caaagcaata gcagcagtaa tcacaggaaa agctgcaaaa
     9361 gcattgccca ttactatagt aaaaagcgcc atagcgatac aatacacagc tactgcaata
     9421 aaagcattat ctaaactaat ataactagat aaaagtttag atacttgatc gcccattcct
     9481 gtagaaacaa aaactacccc aagtgtagcc aaaatttgcg gtaaaagcgc tgcccaacta
     9541 atgtgatcca tagtatgtgc tgcatcttta acagctcttt taggagaagc cttaaacata
     9601 aaacaagcaa ctactgaaga aataattata cctataatca aagccatcaa tgtagcattt
     9661 ttattttcaa aaaaactcaa atagggaaat aaaaaagtcc caataagtgt aatcaaagga
     9721 accattaaag caggaataaa aagtttattt ttataaatat ttgcatgttt tatctcatat
     9781 tctttttctt ctttgctaac ttcgatcttt gctggtttta ataaattaaa tcctgctata
     9841 agtgctagta aaatcactat acaacccatc acaaaatgag gcaaaactcc tgctagtaaa
     9901 aaagtaaaac tataacttat ccaaaatacc ccgccgctta ttcttgattt tatatcttta
     9961 gcttgattag aaaaacttaa aattccaaaa actaaaaata aaattcctac aatataataa
    10021 agtaaatcaa gacttatcat cactcaaccc tttataagtt ttttccaatc ttttatcaaa
    10081 taaataaagt ctagagcaat ggataattaa agccaaaatt ccagttggta tagcccaaac
    10141 tgataaatgc aatggctcaa caataatacc attgctctca taaaaagctt taataaataa
    10201 aatagaatgc acggctataa aaatatcctc tccaaaaaat acagcaacat tatccgttcc
    10261 cgcagaaaaa gctttgattt tttgactatc tttatgtgtt aagtttttaa atttaagctt
    10321 agctgcagct tctgccatag gggctattaa aggtcttatc atctgtgcat gtccgcctaa
    10381 agataaaagc cctaaagctg cagtaacttg tctaaaaaca aaataacaca ttaaaattcg
    10441 tcctgtactg gcaactttta ttttggatat taaattttta gcctgctctc ttaagccttt
    10501 gcgttccaaa acagcaagta aaggtaaaat aagccaaatt atagcaacat agcgattatc
    10561 tacaaaagat tttcctatat cactaacaac cttaacaaaa tcaaaacctg aaacaagtcc
    10621 agcataaatt ccaactgaag ttaccactaa aaaggggtta atctttaaag caaaacctaa
    10681 aacaatcaaa ggtatagaag caagaagtaa ccattccatc aaccatctcc acaatatgaa
    10741 ttagaaatat tatagaaatt ttaaattgaa gaaaagttta aaaaaatatt tttaagaatg
    10801 gaatgagaaa ttaagtaaca aaataaattt tatataaatt taaaaaagcc ttggaatagt
    10861 ccaaaagctt tttttgtatt atttgttcgc tctttctata tactcaccac gcacagtatc
    10921 aacgcgtata acttcacctt ctaacacatg aaaaggaatt tgcactactg cgcctgtttc
    10981 caatgtagcc ggttttttat ttgatccttg agtatcaccc ttaaaatttg gagctgtttc
    11041 gatgattttg agttcaacaa cttgtggaac ttctacgccg atagctttac cattatggaa
    11101 aagcacatct accatcatac catcaagcat ccattttttc gcctcaccta catcatcatc
    11161 actaatagct acttgttcat atgtttgcgt atccataaat tggcaatttt caccatcatc
    11221 ataaagatac tgcatagttt tatcttctaa atttggagct tcacatttat cacctgcatg
    11281 gaaagttttt tcaagtactt taccatcaat aaaagatttg attttaatac gcacaaaagc
    11341 aggacctttg cctggtttta catgctgata ctcaactatt ttaaaaggaa ttccatcgat
    11401 ttctatttta agtccctttt ttaaatcacc cattgaataa gatgccataa atttcctttg
    11461 ttaaaaaata aaaaacaatt ttatcaaatt ttgattgata tcacaataaa attattttat
    11521 ttgatgaaaa aataagtaaa attacgttaa aatccaaatt taaagcatag taaatgctcg
    11581 cttcttttta ggagaggaaa gtccgagctg ctaaagacaa acattccatc taacagatgg
    11641 ctagggtaac ctaagggata gtgcaacaga aagaaaacta ccacgcaagt ggaaaaggtg
    11701 aaacggcggg gtaaaagccc accagcgatt ttggtaacaa tttcggctat gtaaacccaa
    11761 tgtgcagcaa gaagggatgg ttagcgtctt tgttttaacc cttcgcttga ttttgtttgc
    11821 aaaaacaaaa ctagataaat gagcattcaa gacagaactc ggcttatcgc tatgcttttt
    11881 taagatttaa aatatgtcaa cgctttttga aatttttgaa tttcaacagc ttttgttttt
    11941 ttcttttgtt caatcagtat aacagcttct tgcaaaagag cttgaacttg ataaaataca
    12001 tcatttgcat tttcttttaa aaaatcttct gaaggcgatt ctttggctaa atttttaata
    12061 aaagctttca tatcaagttc atcaagtaaa ttttcaagtt tattgacatc ttcttggatt
    12121 aatgcaagtt taaaatcact gagccactgt ttcattgtta tgcacttctc tccaagcttc
    12181 tagcaaacct ttggttacat ttataacttc attgattcta tcttcgttat tttctaaatt
    12241 tgccaaagat aaaagttgaa tttctcttgt ataaagcccg cttaaataat gtgccacttc
    12301 tccgcctttt tcatagttta aagtattaat aagctctata aaaatagccg tggttctttt
    12361 tacaaaatac actctttgtt ctatatcttc atttcttatg gctactttag ctcttgcaca
    12421 aaaacgcaaa attccctcat aaagcatttc aataagtttt tgcggggact ctatccccac
    12481 ttgattttga gaataagcat tataggctaa attattttgc atctttttta tccttaatta
    12541 ttagaattgt ttgccgcatt aatcatatta gtcacagtat ttagctgttg attgagttta
    12601 tttaaaatac tctcatattg caaccattga ttcgccattg tatcatatct tgtatcaatc
    12661 atagcctgag tcgagtcttt agaggtattt aatgatttaa tatcatttgt caaactctca
    12721 tcatattttg taattgaacc atcttttcca gtcatctctt gcaacgtggc ttttaatttt
    12781 gaaaaaatac ctttaccttc tataggctta gaggttatat ttacgtcaga caaacctaat
    12841 tccttgagaa tgttagcatc tcctttgatt gaaaaatccg agctaccatc tccactaaaa
    12901 ttcaacctaa accctgtaac attgttttga ttataggatt caaccttaac ttttaagcct
    12961 tcaatacctt tactgtttat atgattagct aaattttgaa gcaattcttc ctctgttttc
    13021 cctgttaatt taaaattagt accatcagaa tttttagaca aatcatatgt ttgattatta
    13081 aaaactatag taaaatctcc tggtttaaat tctaaaccat tagtattacc tccattggaa
    13141 ttaagatatt tacttaaact tcctgtctta attacctctc ctgtgtgatt aatgtcttcg
    13201 tatttagtaa tatttgaaaa aaaactttca gtagagtctg gatcttcttt aactttttgt
    13261 tcaaatttag aagaatcaaa actcaaagtg cctgcatcat ttaaacttaa gccaaaatcc
    13321 tgcatagaaa gcataacctt agtgtttact ttattaccat ttgcatcttc agtagttcca
    13381 tcaacaactt gagaatcaaa caaatcagca agaatgcttg agcgtattga atttacttca
    13441 ctgatgcctt gtaaagttcc ttttgttcca gtttcactat tatagtcagt tgcagcatta
    13501 agattggtta ctaaatcatt ataagcatcc accaaatctt gcatggcttt tgtcacacct
    13561 tcaaaatctt gctgtacatc aaaattaatt tcacctgttt tatttaaagt taaagtcatt
    13621 cctacaccaa gatcggtaac agtattactt gatctaaaca tcttaatacc atcaagtgta
    13681 aattctgcat tttgcgcagt ttggatatgc aaagaagcat ccttaatgcc ataacctttt
    13741 ttatccttat ctggatcaat agaagccgat acatctaatc cccatccaag atcgtcgaat
    13801 attttttctg catttatatc tttttgatat ttaccattcg aatctttttt tcccgcatag
    13861 aaacttatcg cactgtcttc gcctgtttct ttgctggtta aagttaagcg gtaaggagtg
    13921 cctttctctc ctgtgtttac aatcttagca acaatctctc ctccactagc ttcattaatt
    13981 ttatcagcta aatctctata ggttgtgttt ttatctaccg taacagtata ttctttgcca
    14041 tttgaaaaaa aagtaagatc ggcagttcca tttaattgtg cattaacaaa accaccgtca
    14101 tttgctaatc ctttactttg atacacatct ttttgtgcaa gttgagtaac attgatattc
    14161 atgctttgta aagcaacacc cgaattaacc gtaagacttg ctggaggatt atcgctaata
    14221 cttcctacaa cttttctttt cgcaaaaacc gtagcatcgg ctaatgatga aacagccgtc
    14281 tgaaaactta gtaatttagt tttgatttct gttaaatctt tttgtttggt tgtattttct
    14341 tcaatttttt tagtataagg atcaatacga gctttttgct ctgcttcttt taatttatct
    14401 atagtatctt gagttaaaac cccagaacca aatcctaaac tagatagact accaaatgcc
    14461 atttttaact ctccttatca aatatcattc ctatcacatc cctaaaatac tcagctaatc
    14521 tcatagcttc ttcactagga atttgacgga tttcccttcc agtgcttttt tcagtcacgc
    14581 taatatacat agaaccgatt ttatcactat aaccaaaacg aacattggta tctagagaat
    14641 ccatttgctc atttaacttt tttgtaatat cagccaactt ttcactcaca cctcgttgct
    14701 gtccatcatc gccttcttga ccttgacttc tatcggtttg aatgtttaaa ctagcctgtg
    14761 tctcacttgt tctttggcta atgtttgcca aagctgtatc catttgccca tttgccttcg
    14821 atatttccat tttaaaatcc tttttaaaat ttcctattgc tagttaaaag cttatatcga
    14881 caaatttata aatttatgaa cacttataaa gaaaatttta tttttcaata ataaaaaaaa
    14941 taataagcaa aaactgtgcc aaaattttaa aataaatctc aattatctta aaaaatttca
    15001 aatttattaa aaagatctgg attattttct aaaatattac gcaagatcaa atcttctatc
    15061 acgcttttag tgcaatctgt ttgcttaggc caagctctta aataaccctc agcttcacct
    15121 ttagcacttg catctactcc aagtctttct tctttgataa aaatatctct tttagcatct
    15181 atattattta ccacacgcca aacaagcata taagaatttt caagcttatt ttcagcatct
    15241 aaaaacacta aaatcctaaa atgtttttta aattctaaaa gtttgtcaaa actttgttcg
    15301 attttttctt ttttatcaag caaaatacaa actataggac ttttactttc tttataaaat
    15361 tgctttaaat ttaaaagttc taccttagtt ttaaaaagtt ctagtaattt ttcatcttct
    15421 aaaatttcaa gctcttcaac ttgtatttct tcgcaagcat caagtcctgc tttaccccca
    15481 aaacaagaat taggtgaagc atgatctaat tgatcacaaa ttccttctga aattaaaatt
    15541 ttctttgtat taaaacgatc taacatataa ggaattaaag catcataatc tttcaaagaa
    15601 ggtgcatttt tatccacaaa aattgcatgt ttaacaaaac tcatttgccc tactccccaa
    15661 aatgcatgca taatttgttg cgcatgagcg ggatattttg catcgatttt tgctaagata
    15721 agattatgaa agaccccatt ttcaggcata ttataatcaa ttaaatcagg tactgaagtt
    15781 tgaaacaagg gtaaaaaaat tctttcagta ccaagcccca tgatcttatc ttctaaagga
    15841 ggctttccta caaccgttgc ttgatagatc gcatcttttt tagcataaat tttttctact
    15901 ttcatcacag gaaaaagttc agcaggagtg taaaaacccg tatgatctcc aaaaggacct
    15961 tcgattttaa actcttctaa atccacataa ccttcaataa ccacatcact atcataaggc
    16021 acaaaaatac cattttcaca aggagtaatt tttgcaggag tttttttaat aaaaccataa
    16081 agtaaaagtt caaaaattcc cttaggtaaa ggtgcttgag aacaccaaat ataaagcgga
    16141 tctccaccta tggctatact tacaggcatt tttttaaaac cagcattttt gtattcgtga
    16201 taaaaatttg ccccatcttt atgaatttgc caatgtatta aaagttcatt tttatcactc
    16261 atttgcaaac gatacattcc aagattattt tgagttttat ctaaattttg tgtataaact
    16321 tgccccatgg taataaattt acccgcatca tcttcccaag tttttagtat gggaagttct
    16381 tcaagtgagt ttaaaatttc ataatcatac aaggctttat tttttttcag tcttttagga
    16441 ggaatatttt taaaacttaa caaattcata aaaaaatcca tttttgcttt aaaactcgta
    16501 ggaatatgaa gcttggtgag ttttgaaatt tcttcagcca cctcttcata atcacgtcca
    16561 aaagctaaat ttaaagcctt ttcattgcaa aaagtattca tcaaaacagg aaatttatat
    16621 tgtttattta attttttatc tataggattt ttaaataata aagccttccc tttttctcct
    16681 tttttagctt ctatataagc taaatgagcg atttcaagat ctacatctac aggttcttca
    16741 attaccctta aaagatcatt ttcttttaaa atttgaataa attctttcat atcatactct
    16801 cagctttttt taaaagttct ttagcacctt tagcaataaa ctccttagcc aaactctctc
    16861 caaaaccttt aaaatcattc tttttaatca ttctcttatc ttttaaaatt tcacttccat
    16921 cgggtagtcc aagtaccgca cgcacacaaa tttcatctcc caagagctct gcgttaatac
    16981 ctataggaac ttgacaacct ccttctaaag tagcaataaa ttctctttca atgcttgttt
    17041 caatcaaagc attttcatca tttaaacatt ttaaaagttc taaaattttt tcatcattta
    17101 tgctttctat acctaaagct ccttgagaag ccgcaggaat aagctcatct ttgctaaatt
    17161 cataaacaaa attcacttgc ttatctaagt ttaagcgttt aattcccgcc attgccaaaa
    17221 taatcgcatc aaaatcatta ttttttaatt tctctatacg agaattgaca ttaccacgca
    17281 aagaaataat atctaaatca ggtcttaata ataaaagctg catcttgcgt ctaagactag
    17341 tagtgcctat ttttgcacct tttggtaaag aaagaaaatc tttataattt tgacttagca
    17401 tagcatcatt gctttgctct cttttgctta ccgctgccaa aactaaacct tgaggaaaaa
    17461 aactaggcac atcttttaaa ctatgcactg ctaaatgtgc ttcttttctt aacatacttt
    17521 cttcaagttc ttttgtaaaa agtcctttac caccaatttt tgccaaagga gaatcaagca
    17581 aaacatcgcc ttttgtttta aaaccttcta aaagcacttc aatttgatgt gtatttttta
    17641 aaatttgggc tacatgttca ctttgccaaa gagctaattg actttttctt gttgcaataa
    17701 taagcttcat tttctatcct ctataatttc aacatcaata atttcttcat tagaattttg
    17761 atactcttgc ttggtgtatt gatattttga tttagttatt aatttcaaag caataccaaa
    17821 gaaaaataca aaaattccaa aaacacttgt aataatccct ggaaaaacaa gtaaaaaccc
    17881 tgcgataaca aaagaaaatt gtgttaacat atcctttaag ccacccattt gaaattcaag
    17941 catatttttc caaaaaattc ccaataaaac cgcaccaaaa atcatactca aaagtatgaa
    18001 aaataaaaaa ttaccaaaac caaaaaacac tataaaaagt atacttgcaa taatttcaag
    18061 tacaaataaa gggcttaaac ttaatttata attcataaca ctttcttttt aagaatttcc
    18121 ataagttcat cagtttttat aagttctttt atcaaacctt ctctttggat aagctctatt
    18181 tcattctttt ctaatccttt accaacaact aacgcataag gaaagcccat aagttcaaaa
    18241 tcattcattt taaccccaaa acgctcattt ctatcatcaa gcaatacctc taatccaaga
    18301 ttagttaaat cctcataaag cttattagca aattctaaag ccttttcatc tttgagattt
    18361 gaaacaataa tttcaagcac aaaaggagct aaagttttat tccaaataca tcctttttca
    18421 tcatgacttg cttcagtagc tacagccaac aagcgtgaaa cacctatgcc ataacatccc
    18481 atgtaaaaag gctgactttt gccattttca tctaagaaat ttgcattcat cgctttggaa
    18541 tatttttgtc ctagcttaaa aatatgccct acttctatac ctttactttg ttttaatttt
    18601 gctccacatt taacacagca atccccttct ttaacttcaa tcaaatcttt aaaacgatct
    18661 ttatttaaat ttacaacatc aataccgatt aaatgataat ctttttcatt cgcacccata
    18721 atcatttgct tttcgttttc aagctcaaaa tctatataaa aatctatatc ttttaatccc
    18781 acaaaaccta taaaaccagc tactaagcca gctttttcca attcttcttc gctcgcatcg
    18841 actagttcaa gggcactgca agcattttga gccttaacct cttgcaaatc atcacttcct
    18901 cttataaaaa acacaactaa tttgctttca ttttcataaa tagctttttt taccactgct
    18961 ttaatcgtat aaaaagcatt gattttaaaa aattgtgcta aagaatctat agttttaata
    19021 tttggagtgt gaaatttact tgcataattt gcttcaggac gctcatcttg acaagttttt
    19081 ttagctcttt ttgcagcttc aacattagcc gcataatcac aattttcaca aattaaaata
    19141 tcatcttccc cattttttgc taaaaccata aattccttag agccacttcc accaatagcc
    19201 ccactatcag cttcaactgc tctaaaatca agccccattc tttgtaaaat ttgagaataa
    19261 gttttataca taagctcaaa ctcacgccct aaatcttctt cattagcatg aaaactatat
    19321 ccatctttca ttagaaattc acgacatctt aaaagcccaa atctaggcct tgcttcatca
    19381 cgaaatttaa gtccaatttg atataaatgc aaaggaagtt gtttatagct tgtgattttg
    19441 ttttttacca aagaaagcat agcttcttca tgtgttggac ctaaaacaaa ttcattttct
    19501 tttctgtctt taaaacgcaa aagttctttt ccaaaaacat tgtaacgccc actttcttgc
    19561 cacaaacttg caggagtgat aaaactaaga tttacttctt gtgctccagc cttatccatt
    19621 tcttctttaa ctatattttt aatcttgtct aaaactcttt ttcccaaagg caagaaatta
    19681 taaagtccgc taccaatttg ttctacaaaa cccgcacgcg ttaaaaaaat ataactaggt
    19741 aaactcgcat cttttggcgc ttcttttaaa cttggtgcat aaaatttagt aaatctcatc
    19801 attattctcc atatcaaatt cacatttata ttgatttaaa ccttcaagat tattttgcaa
    19861 atcaaaaaca taacgcatag cattaatcac tgtatcgctt tgcattttac cttgtaaatg
    19921 tttcaaattt acagtaggcg tgtgtaaaaa agccttaaaa acttgatgaa tcaactttct
    19981 agcctcttct ttatcagatt ttttcaaata tccttttttt aacgcaattt caagttgttt
    20041 atctgcatat tctttagctt gcaagcgtat agctttgata ataggcatca aagccaaatc
    20101 gtttaaatac ctaaaaaatt cacttgtttc acgacctatt atcccataag ccatacgagc
    20161 ttcttgttct cttagtgcta aatttttttg aaccacaatt tcaagatcat ctacagcaaa
    20221 aacagatata ttttcatttt cattgatatc aatatccctt ggaactgcaa tatcaaaaaa
    20281 atacctttta taagaaagtt cttctattaa agaatttgta ataatagcat ttggtgcatt
    20341 ggtagctgag aaaaaaaact cgtattgatt taaatatttt tttaaatttt ctaaactatc
    20401 atattcgctt aaaacaccaa gtctctcaca caaatcttta gctttttgta aatcacgatt
    20461 taaaataatc accttagcac ccgcagcaat taaatgtttt gccgcaagtt ctcccatctc
    20521 tccagctcca ataacaacag cttttttttg cgttaaatct gcaagttctt ttgcttttgc
    20581 cacggcaacg ctagctacag aaatagaatt tttagaaatt tgagtttcat tgcgtacctt
    20641 agcagcacat ttaaaagcac tatgtactgc tcttgaaagg tgtactccac aaaaattatt
    20701 ttttacagca aaagcaaagg catcttttaa ttgtcctgct atctgagttt ctccaaccac
    20761 caaactatcc aaagaacttg ctacagaaaa aagatggtgg attgctccac tatcttcaaa
    20821 aatatcagct ttttcaagta aaatatcttt atcaacatca caaagtaaag ccaaagattt
    20881 aacaataaac tccgcacagg ccatttttac aaaagcaaca atttcaacac gattgcaagt
    20941 gcttataacc aaacattctt caatattttc atgagtgcta atgattttta aaaactcact
    21001 ttttttagct tcattggaaa agcttaactt ttcccttaag gcaatatctg tatttttatg
    21061 agtaaaagat atacaataat acattaaaat tccctatcta tcatagcttt aataatatca
    21121 ttaagcttgt tattatcata tttttcaatt gcttttctag ccttttttgc ataagtttta
    21181 gcttctaaaa tagctttttc taaagctttt tgttcttcaa atttagtttt tagccattct
    21241 ttttcatttt catttaaatc ttttttaaat aaagtctgca aatatatcct atcttgttct
    21301 tgtaaatttt cataaagata aatataaggc aaggtagttt taccctcttt aaaatcattc
    21361 atagcaggtt ttccaagaat tttttcatca ctcttaatat ctaaaatatc atcaatcatc
    21421 tgaaaagcaa gtcctaaatt tttaccatat tctgcaaaat ctttttcata taatccagcc
    21481 aaaatagctc cgcatctagc acttgcttca atcaaaacag ctgttttatt atagatcatt
    21541 ttcaaataag cttctttatt gatattaaat ttctctccca aatcaacatc cataagttcg
    21601 cctatagcaa gctttacaac agcatctgaa ataatacttg caaatctagc atccattttg
    21661 cttaattcat aaaaggcttt tgaatacaaa atatcgccca acataagagc attttttgta
    21721 ccaaattcag cattaacaga tcttgctcca cgccttaatt cactctcatc gataatatca
    21781 tcatgtaata aactagcaag atgtatcaat tctatagccg cacaaatttt aaaagcaatc
    21841 tcactctcat ctgcgatagt taataataat ttagagcgta atttctttcc tgattttaca
    21901 tttgaaagca tatttaaaat aggttcatag ccaagctctt gtaaaaactg ttttattaat
    21961 tcatctattt tttgcactat cttttccttg ttaattgcta ttattatttt ctttgcttgt
    22021 taatggtttt acctgaggtt cgttaaaatt aatcatagga acaacctgat tattttgcgg
    22081 tggattttgt aaagcttttt ttctcggatc taaaaattct accattaagc gagattcctt
    22141 atcttctata taaaccgtaa aagttgccaa acctttatta taaccactaa attctaaaat
    22201 aagtcttgct ctatcaatat gtggattagt ataatcaggt attaaagttt gagttaccca
    22261 atctaaattt cttcttaaac tcatcacaaa ttgacgcgga tatttgcgaa atttcgaatg
    22321 tacgatgata ttagtattat caaacaaagt ccaataaaaa tcaaaatttt gcaccttatc
    22381 ttcatagcct atttctttaa tctgcacact agctctctca tcttttttaa gtataaattt
    22441 ataagtataa tcaaaagttg gttcagatgc taaaacatta ctaaaaataa aaaaaataca
    22501 aattaaacaa gggcttattt taaacaattt tagccttcgt gtcctaaaat ttttgcgccc
    22561 aattctatat aaatatcatt ttgcctttct tctataaaat caccattttc taatatgaaa
    22621 ttttttacat ccatttctgt taaaccttgt ttttccaaaa gttccaccat ggcaatatga
    22681 tcagcaaaaa attcctcaaa aactttttct a
//
LOCUS       DAPIYB010000020        22539 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.020, whole genome shotgun sequence.
ACCESSION   DAPIYB010000020 DAPIYB010000000
VERSION     DAPIYB010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22539
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.020"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            91..1899
                     /locus_tag="RJ318_000596"
     CDS             91..1899
                     /locus_tag="RJ318_000596"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDV7430490.1"
                     /translation="MEKEVIAYLDNETIIDSQSVKNTNLKEIYFDNSKESLEVIRHSC
                     AHLMAQAIKSLYPEAKFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIE
                     ISKYEITKSEALAKFQNDDLKQEVLLRIPDRAVSIYKQGEFEDLCRGPHVPNTKFLRF
                     FKLTRVAGAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKL
                     FTFDDEIGGGLPIWLSNGARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHY
                     ANYKENMYFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSG
                     VLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKA
                     IGDDEIWEIATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQV
                     DFNLPSRFKLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVG
                     IVPIGEAHIAYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEV
                     AKRSVALRDRRAKEQKNLSLDEFIKLVKEKMSEVHF"
     gene            1896..2414
                     /locus_tag="RJ318_000597"
     CDS             1896..2414
                     /locus_tag="RJ318_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDV7430491.1"
                     /translation="MSKEKEVLLNEEIRADEIRCVGDDGKVYGIISSDEALEIANRLG
                     LDLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKIAQNDIN
                     YKVKHALEFLEQGKHVRFRVFLKGREMATPEAGVALLEKIWTMIENEANRDKEPNFEG
                     RYVNMLVTPKKA"
     gene            2453..3544
                     /locus_tag="RJ318_000598"
     CDS             2453..3544
                     /locus_tag="RJ318_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDV7430492.1"
                     /translation="MKENPSFLKEQIITYLGNKRALLSFLNNGFKVAKKELGKDKFSF
                     CDIFSGSGVVSRFAKAHSNYILANDLEDYSKLINECYLANKDKDLLQNIKKYYKNLIQ
                     NLDFQKGFISELYAPKDDDDIKKNERVFYTFKNALYLDTIRQKIENEIPKELRHFFIA
                     PLIYEASVHSNTSGVFKGFYKGKDGIGKFGGEGQNALKRIKGEIELKMPIFSNFSCEF
                     EVMQKDANMLAKELDFFDVVYLDPPYNQHPYSSNYFMLNLIANYKKPEEISKISGIPK
                     DWNRSTFNKSKFAQDALFELINDLKARVILLSYNCEGFVKKEIFLKRLSTLGKCRILE
                     QKYNTFRASRNLKNRNIHLHEQLYILVKN"
     gene            3586..7046
                     /locus_tag="RJ318_000599"
                     /pseudo
     CDS             3586..7046
                     /locus_tag="RJ318_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_172669436.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            7127..8155
                     /locus_tag="RJ318_000600"
     CDS             7127..8155
                     /locus_tag="RJ318_000600"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDV7430493.1"
                     /translation="MKIKVGILGASGYAGNELVRILLNHPKVEISYLGSSSSVGQNYQ
                     DLYPNTPLNLCFENKNLDELELDLLFLATPHKFSAKLLNENLLKKMKIIDLSADFRLK
                     NPKDYELWYKFTHPNQELLQNAVYGLCELYKEEIKKASLVANPGCYTTCSILSLYPLF
                     KEKIIDFSSVIIDAKSGVSGAGRSAKVENLFCEVNENIKAYNLALHRHTPEIEEHLSY
                     AAKEKITLQFTPHLVPMQRGILISAYANLKEDLQEQDIRDIYTKYYQNNKFIRLLPPQ
                     SLPQTRWVKSSNFADINFSVDQRTKRVIVLGAIDNLIKGAAGQAVQNMNLMFDFDEDE
                     GLKFFANL"
     gene            8165..8611
                     /locus_tag="RJ318_000601"
     CDS             8165..8611
                     /locus_tag="RJ318_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7430494.1"
                     /translation="MLIRAMQKSDYEAVYKLWCEIKGFGIRSIDDSKENIENFLDRNP
                     NLSVVAVIDEEIVGSILCGHDGRTGGFYHVCVHKDHRKKGIAHEMAKFCLEALKAQKI
                     NKIALIAFKNNDLGNEFWKHYGFTLREDANYYDLSLNEYNQTSFNA"
     gene            8615..9460
                     /gene="argB"
                     /locus_tag="RJ318_000602"
     CDS             8615..9460
                     /gene="argB"
                     /locus_tag="RJ318_000602"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDV7430495.1"
                     /translation="MIMQKYLEKANVLIEALPYIRKFNSKIILIKYGGSAMENEELKH
                     CVMQDIALLKLVGLKPIIVHGGGKDISAMCEKLGVKSEFKNGLRVSDKATIEVASMVL
                     NHINKNLVHSLQNLGVKAIGLCGKDGALLECVKKDENLAFVGTIQKVNSKILEELLEK
                     DFLPIIAPIGMDENFNTYNINADDAACAIAKALRAEKLAFLTDTAGLYEDFNDKNSLI
                     SKISLEQAKILAPKIEGGMHVKLKSCIDACENGVKKVHILDGRVKHSLLLEFFTDEGI
                     GTLVG"
     gene            9464..10651
                     /locus_tag="RJ318_000603"
     CDS             9464..10651
                     /locus_tag="RJ318_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDV7430496.1"
                     /translation="MKMDYKEQSHIIPTYKRFDIVLEKGQGVYLFDDKAKKYLDFSSG
                     IGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSG
                     TESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISG
                     VKFAKYNDISSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDKKDILLIA
                     DEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVINQKVASNSLEAGDHG
                     STYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGF
                     MQGLSLDKSVKVAKVIQKCQENALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKAL
                     KSF"
     gene            complement(10670..11299)
                     /locus_tag="RJ318_000604"
     CDS             complement(10670..11299)
                     /locus_tag="RJ318_000604"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HDV7430497.1"
                     /translation="MNAFEQKRCQNMAEEIAQKVFINEELFNAFCQIPREIFSPLKAH
                     AYRLDALPLANSQWISSPLTVAKMTMALDFKNADSILEIGCGSGYQAAILSKVIRRVF
                     TIERIENLAKKAAQTFRELELFNINVKFDDGQNGWKNYAPYDRILFSAYATQIPEILL
                     DQLSDDGILVAPILHNGKQFITRLRKNGTNLQKEILEECLFVPIVDGKE"
     gene            11388..11936
                     /locus_tag="RJ318_000605"
     CDS             11388..11936
                     /locus_tag="RJ318_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HDV7430498.1"
                     /translation="MLIKFKNHSPKLGQNVFVAEGAKIIGEIEIGDESSIWFNCVLRA
                     DVNFIKIGKRTNIQDLSTVHVWHREFDEKGKLKDAGFPTIIGDDVTIGHNCVIHACVI
                     KNRVLIGMNAVIMDNALIEEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRELNDEEV
                     SFLKQSALNYVDFKNEFLKDLQ"
     gene            complement(11905..13278)
                     /locus_tag="RJ318_000606"
     CDS             complement(11905..13278)
                     /locus_tag="RJ318_000606"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDV7430499.1"
                     /translation="MMTSKTSLALLCDFYEFTMSQGYFKNNKKDQICYFDIFFRKIPD
                     SGSFAIFAGLEDILDFVENLSFDAEDIEFLRKQGIFDTEFLDFLANFKFKGEIYAMRE
                     GEVIFPNEPLLCIKATTIEAQLLETFLLLSLNHQSLIATKTNRIVRAAKDSKILEFGS
                     RRAQGSEAALKGARAAFIGGCIGSACTLAGKIYNIPINGTMAHSWVQMFENELEAFKA
                     YVKIYPKNPVFLIDTYDCLNSGLKNAIKVFKEFGIQEGGVRIDSGNLLELSLKIRQEL
                     DQAGLQKCKIIVSNALDEWSIKKLKEQNAPIDIFGVGERLITASSDPIFSCVYKLAAL
                     EDQGIKPKIKISENNEKSTLPHFKKLFRVYDKNTQKILFDELYVFDENPNQDENLERK
                     ELLELVYKEKRLLKKSSLNTIQDYTKEQISKLDESFLDLDRFVKFEVKLSPKLQNITE
                     DLLKTRF"
     gene            complement(13265..14287)
                     /locus_tag="RJ318_000607"
     CDS             complement(13265..14287)
                     /locus_tag="RJ318_000607"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDV7430500.1"
                     /translation="MQRKRIYNPSSNETLGDRKVFDGNPHGILNFTKAKYTWALKLWD
                     LMEANTWFPKEVDTTKDALDYRCNLTAGEKRMYDLVWSQLISMDSFQTNNLADNINPY
                     ITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSI
                     YEELAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDE
                     ITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFTD
                     DIIEEYIHYLVDQRLSAINLDKLYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGS
                     ISFDDF"
     gene            complement(14301..14711)
                     /locus_tag="RJ318_000608"
     CDS             complement(14301..14711)
                     /locus_tag="RJ318_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDV7430501.1"
                     /translation="MKTKAKISSRWLRFRALLIDIFLIYVPILYLFYFLLGSKEAFLN
                     NHFITTLCTFLFGLIQAIFLTKKAQSPGLKAYDLYLIDIKTGKKLSFLRILLRYVIFI
                     ISFGLLFGLFVSFVRKDRLNLHDILTQSCIATKA"
     gene            complement(14712..15320)
                     /gene="pyrE"
                     /locus_tag="RJ318_000609"
     CDS             complement(14712..15320)
                     /gene="pyrE"
                     /locus_tag="RJ318_000609"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDV7430502.1"
                     /translation="MNLEQIYKDCGAYLEGHFLLSSGKHSQFYLQSAKVLEDPKLAAK
                     LCDELAKIIASYKIEFDSICSPALGGILAGYELARACSKRFIFTERVNKEMTLRRGFE
                     VKKGEKFIICEDIITTGGSALESAKIIESLGGIVVGFAALANRGFCAVENLKSPRKDN
                     AKLPENLPLFTLGNFEFEIYDETNCPLCKKGNKAIKPGSRGN"
     gene            complement(15323..15886)
                     /gene="frr"
                     /locus_tag="RJ318_000610"
     CDS             complement(15323..15886)
                     /gene="frr"
                     /locus_tag="RJ318_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDV7430503.1"
                     /translation="MIMLNEIFNKQKTQSEKSLEALKKDFTTLRTGKVNIHILDHITV
                     DYYGTQTPLNQVATVLASDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKL
                     FFPPMTREQREENVKQAKAMGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYD
                     EVQKLTDTYTTKIDEGVKSKESELLKV"
     gene            complement(15896..16267)
                     /gene="secG"
                     /locus_tag="RJ318_000611"
     CDS             complement(15896..16267)
                     /gene="secG"
                     /locus_tag="RJ318_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDV7430504.1"
                     /translation="MITLLIILQFIIVVVICIAVLLQKSSSIGLGAYSGSNESLFGAK
                     GPAGFLAKFTFVMGILLIANTIGLGYLYNKASKDSLAEKIKVENNNTTIRSAPIVPTT
                     PNTNSIAPSAPQLPSDVNSSK"
     gene            complement(16371..17066)
                     /locus_tag="RJ318_000612"
     CDS             complement(16371..17066)
                     /locus_tag="RJ318_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDV7430505.1"
                     /translation="MSLYDRDYSRSKEFENTRSSELSIFIKQTYQLFAASLLAATVGA
                     YVGIFALASFFIQSQVTFWILFAVEIGLLFALQWKKREAPLNLVLLFGFTFCSGLTLT
                     PLLISVLALPAGGIIIAQAFALTTVAFAGLSVFAMNTKKDFTVMGKALFIVLIVIVAA
                     SLLNLFFQSSIVNLAISAVAAILFSFYILYDTQNIIRGNYETPIEGAVALYLDFVNLF
                     VSLLNILRSFNSR"
     gene            17226..17861
                     /locus_tag="RJ318_000613"
     CDS             17226..17861
                     /locus_tag="RJ318_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HDV7430506.1"
                     /translation="MENLISGAIKFMQEDFKEHEELFESLKNKQNPHTLFIGCSDSRV
                     IPNLITNTGPGELFVIRNIANIVPPYRVGEDYLATTSAIEYALNSLHIKNIVVCGHSN
                     CGGCNALYYSDEELNKIPNVKKWLTMLDPIKKDVMIFARDDLAMRSWLTEKLNLVNSL
                     QNILTYPGVQEALDEGKIEVHAWYYIIETGEIYEYDFKAKIFTLIQDRKVQ"
     gene            17858..19741
                     /locus_tag="RJ318_000614"
     CDS             17858..19741
                     /locus_tag="RJ318_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HDV7430507.1"
                     /translation="MKKIIFSLCFFILHLGAQEFKFIDANISKEDEGIYALVEKYVDL
                     NNQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKIPDMIVGQKINEEAVARFLKAKE
                     KLLDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDK
                     AMENLQNSSNVNLDSFKSKITNPEELEKITLKERYISNAVDSYSEILKYLRSNADLLE
                     SNYIFSLLELQVWIDRINEAIGVSFVNIGKIVISALVLVFFISLRRFFANIVYFFLVQ
                     LFYRNKNDVDDIKVIFIENIKKPVGFLLIVYAISLCLTIATYPAPLSVNLSNFFHIVY
                     AVLIAWLILRMLDGYGVVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGF
                     NISAIIASLGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVETG
                     LRKTTIRTFDNCLVFLPNSTIMGANIKNWSKRRMGRHVRMYLGVGYDATPEKLEQCVK
                     DLREFLHTSDLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSEFADSSI
                     NIELYFYIKEIGGKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAK
                     AIK"
     gene            complement(19764..20735)
                     /locus_tag="RJ318_000615"
     CDS             complement(19764..20735)
                     /locus_tag="RJ318_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein
                     NifU"
                     /protein_id="HDV7430508.1"
                     /translation="MGKNSLIGGSIWDEYSQKVQDRMNNPQHMGEFSEEDAKARNAKL
                     IVADFGAESCGDAVRLFWLVDEKTDKIIDAKFKSFGCGTAIASSDTMVDLCIGKTVDE
                     AVKITNLDVEFAMRDNPETPAVPPQKMHCSVMAYDVIKQAAAHYKGISPEDFEDQIIV
                     CECARVSLGTIKEVIKLNDLHSVEEITQYTKAGAFCKSCIKPGGHEKRDYYLVDILAE
                     TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQK
                     AEGAAIDVYIRYLGACSGCSSGSGATLYAIETILQEELSPNIRVMPV"
     gene            complement(20745..21926)
                     /locus_tag="RJ318_000616"
     CDS             complement(20745..21926)
                     /locus_tag="RJ318_000616"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifS family cysteine desulfurase"
                     /protein_id="HDV7430509.1"
                     /translation="MKVYLDNNATTMLDPNAYELMLPFLKDMYGNPNSLHQYGSATHP
                     ALREALDKLYAGLGANDLDDIVVTSCATESINWVLKGVYFDHILDKERNEVIISSVEH
                     PAVTAAAYFLKSLGVKVIELPVNEEGVSTVEDLRKVISDKTALVSVMWANNETGMIFD
                     IKAMAELAHEFGALFHTDATQAVGKIKVNLTQVGVDFASFSAHKFHGPKGVGGLFIKK
                     GLKLTPLLHGGEHMGGRRSGTLNVPYIVAMGEALRIANTMLDFEDSHIRRLRDKLEDQ
                     ILALPDTTVVGKREHRVPNTILASIKGVEGEAMLWDLNKNGIAASTGSACASEALESN
                     PIMEAIGAEHDLAHTALRLSLSRFNTEEEIDYAAKQIKNATQRLRAISCTYAYNPNNY
                     K"
     gene            complement(22104..22505)
                     /locus_tag="RJ318_000617"
     CDS             complement(22104..22505)
                     /locus_tag="RJ318_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HDV7430510.1"
                     /translation="MTYNEKIISMNNDLLDHQHKELFEISKKLSLMNQRHVGTKELKI
                     VLRELLIMINRHFSDEEAFMREIEYPYINHHTRIHRKIILEIEEIIISEAKFVNIMTE
                     KLNLVVQDFIFKHTAKEDSKIVKYYEEKFKK"
BASE COUNT         7836 a         3111 c         3871 g         7721 t
ORIGIN      
        1 ctgaatttca aaaataatta agtcttagaa agttaaaatt agaactttat aaacactcac
       61 agggtaagtg agcgacaaag ggttaaaaat atggaaaaag aagttattgc gtatttggac
      121 aatgagacaa taattgactc tcaaagtgtg aaaaatacaa atttaaaaga aatttatttt
      181 gataattcta aagaaagttt agaagtaatc cgtcattctt gtgcgcattt aatggcacag
      241 gcgattaaga gtttgtatcc tgaagctaaa tttttcgttg gtcctgttat agaagatgga
      301 ttttattatg attttcgtgt ggaaagtaag attggcgaag aagatttggt aaaaattgaa
      361 aaaaagatga aagaacttgc tgaagcaaag attgaaattt caaaatatga aatcacaaaa
      421 agcgaagctt tggctaaatt tcaaaatgat gatttaaaac aagaagtttt attgcgtatt
      481 cctgatagag ctgtaagtat ttataaacaa ggtgaatttg aagatttgtg tcgtggtcct
      541 catgtgccaa atacgaaatt tttacgcttt tttaaactca ctcgtgttgc aggagcgtat
      601 ttgggtggcg atgaaaaaag agaaatgctt actcgaattt atggaactgc ttttgcagat
      661 aaggaaagtt taaaagagta tttaaccatt attgaagaag ctaaaaaacg cgatcataga
      721 aagcttggaa cagagcttaa gctttttact tttgatgatg agatcggagg aggtcttcct
      781 atttggttga gtaatggtgc aagacttaga tctaaacttg aacatatgct ttataagatc
      841 catcgtttac gtggttatga gcctgtgcgt gggcctgaac ttttaaaagc agatgcatgg
      901 aaaatcagtg ggcattatgc aaactataaa gaaaatatgt attttacaca aattgatgaa
      961 caagaatatg gcattaagcc tatgaactgt gtgggacata ttaaaattta tcaaagtgat
     1021 gtaagaagtt atcgtgattt gcctttgaaa ttttttgaat acggcgtggt acatcgtcat
     1081 gaaaaaagtg gcgttttgca tggacttttt agagtgagag aattcactca agatgatgca
     1141 catatttttt gtatgccaag tcagattaaa gagcaggttt tagaaatttt agcttttgtg
     1201 gataatttga tgaaattatt tgattttagc tatgaaatgg aaatttcaac taaacctgaa
     1261 aaagccatag gtgatgatga aatttgggaa atagcgacta aggctttaaa agaagcttta
     1321 gatgaacaag gtttaaaata cggtattgat gaaggtggcg gggcttttta tgggccaaag
     1381 attgatatta aaatcaccga tgctttaaaa agaaagtggc aatgcggaac catacaagta
     1441 gattttaacc tgccaagtcg ttttaaactt gaatacactg atagtgataa tgaaaaaaaa
     1501 caacctgtaa tgttgcatcg tgcgatttta ggttcttttg aaagatttat aggaatttta
     1561 accgagcatt gtgcgggtga gtttccattt tttatcgcac caactgcggt gggtatagtg
     1621 ccaataggcg aagcacatat tgcttacgca aaagaaattc aaaaagaatt attagagctt
     1681 aatatcgata gcgaggtgta tgaaaaaaat gagagcttaa gtaaaaaaat tcgtatcgct
     1741 gaaaagcaaa aattacctat gattttagtt ttaggcgatg atgaggtggc aaagcgtagc
     1801 gttgctttaa gagatagaag agctaaagaa caaaaaaatc ttagcttgga cgaatttatt
     1861 aaattagtta aggagaaaat gagtgaggta cacttttgag taaagaaaaa gaagtattgc
     1921 tcaatgaaga aataagagcg gatgaaatca gatgtgttgg cgatgatggc aaagtttatg
     1981 gtattatcag tagtgatgaa gctttagaaa ttgcaaatcg tttaggactt gatcttgtaa
     2041 tgatagctgc agatgctaag ccacctgttt gcaagatcat ggactatggt aaattccgtt
     2101 atcaacaaga gaaaaaacaa aaagaagcaa agaaaaaaca aaaagtgatt gatataaaag
     2161 aaatcaaact ttctgtaaaa attgctcaaa atgatattaa ttacaaggta aaacatgctt
     2221 tagaattttt agaacaaggt aagcatgtga gatttcgtgt gttcttaaaa ggacgtgaaa
     2281 tggcaactcc tgaagcaggt gtagctttgc ttgaaaaaat ttggactatg atagaaaatg
     2341 aagctaatcg tgacaaagag ccaaattttg aaggtcgtta tgtaaatatg cttgtaactc
     2401 caaaaaaagc ttaatccact tttgtagata aagcttttaa aggttttaaa ttttgaaaga
     2461 aaatccttct tttttaaaag agcaaattat aacttatctt ggaaataaaa gagcactttt
     2521 aagtttttta aataatggct ttaaggtagc taaaaaagaa cttggtaaag ataaatttag
     2581 tttttgtgat atatttagtg gctcaggtgt tgtaagtcgt tttgcaaaag cacactcaaa
     2641 ttatatttta gccaatgatt tagaagatta ttcaaaactc atcaatgagt gttatcttgc
     2701 taataaagac aaagatttac ttcaaaatat aaaaaagtat tataaaaatt taatccaaaa
     2761 tttagatttt caaaaaggtt ttatcagtga gctttatgct ccaaaagatg atgatgatat
     2821 taaaaaaaat gaaagggttt tttatacttt taaaaatgct ttatatcttg atactataag
     2881 gcaaaaaatc gaaaatgaaa ttccaaaaga attgaggcat ttctttatag ctcctttgat
     2941 ttatgaagcc agtgttcatt caaatactag cggagttttt aaaggttttt ataagggtaa
     3001 ggatggcatc ggaaaatttg gtggcgaagg acaaaatgca cttaaacgca ttaaaggaga
     3061 aatagagctt aaaatgccta ttttttcaaa tttttcttgt gaatttgaag tgatgcaaaa
     3121 ggatgcaaac atgcttgcaa aagaacttga tttttttgat gtagtgtatc ttgacccccc
     3181 ttataatcag cacccttata gttctaatta ttttatgcta aatttaattg caaattataa
     3241 aaaacctgaa gaaatttcta aaatcagtgg cattccaaag gattggaacc gcagtacttt
     3301 taataagtca aaatttgccc aagatgcttt atttgaactt attaatgatt taaaagcaag
     3361 agtgatttta ctttcttata attgtgaagg ttttgtaaaa aaagaaattt ttttaaagcg
     3421 cttaagcact cttggaaaat gccggatttt agagcaaaaa tataatactt ttagagcttc
     3481 tcgcaatctt aaaaatcgca atatccatct tcatgagcaa ctttatattt tagttaaaaa
     3541 ttagtttttc gtgctaaaat tgcacttaaa aatgaggagg gatttatgaa actaaaatta
     3601 tctttttgta cattaatggc atttggtttt tctaactatc tttttgcttc agctattgat
     3661 ccaaagttat tttcaagaat atcttgattt tgccagtaat aaaggcaaat ttcaagtagg
     3721 tcaaattggc ttttaaattt tagcaaaaaa tcctagtcaa aatatctctt ttaatgtgcc
     3781 tatgattgat ttttctactt caaatcgtgg aggaaaattc caaggagaat ttaccaatat
     3841 aggacaatct tatatagtca gcgcttctca tatgagtaca agtttaaata ctgggaagta
     3901 aataaagact atgtgaaaca aggtagtgtt ttacactttg gaggggtagc aaatagaatc
     3961 gtaagctcaa gtgataattt tacttataaa aaaaaatgtg gattttgctg ttttaaaaat
     4021 gagtaagatt agtctcaata aaagtgcaaa tttgagtaaa gatttaaatc ttattgaaaa
     4081 aattctggcg atggtggaga tatttatgaa tacaaggatc cattttggga tagttgtcaa
     4141 agtggaaaat gtgattattc aaaaggtaaa ggcaagcttt ttgatagttc gggttatgag
     4201 tactttgcaa gagagggaag tggtattgta gctttaggtt ttgaagatac aaataaagta
     4261 cccattaaga tttttgattc taatgaaatc aatttaggag gttttgtcgg tttaactcct
     4321 aaaaatactg aagataagcg ttttaagttg caatttctta attataccaa tgataaaaga
     4381 aatcctttta caagttcttc aatatccggg gattctggaa gtagagttta tgtttatgat
     4441 aagatggata aaaaatggta tttagtaggt gtagtaagta cgagtaatta taatgtccat
     4501 tttactatgg atatacttgt ttgcaggttg attatgcttt gatcaatcaa gcaaagatca
     4561 atgaatttta aaatgctcat aaagtagtca taggatctgg aacttataca cttagtagcg
     4621 atggtttgat gaaagatggt aaaaaaatag aaaatgtaag tttgatttct aagactaatg
     4681 tgggttatgt aagctataaa aattcttttg atgataaaat aattgtgata agagaattga
     4741 agaaatgcaa aatagcaagg atttgtattt ttctcaaaat ggaagtataa atttaaatag
     4801 cgatgtggat ttaggcgcta gtgttttaaa tttgataaaa attcaaattg gcaaataaca
     4861 ggcgataaat ggcttataca tggcggaatt tatgctgata agggttcaag gtagaatata
     4921 atgttaaaac caaaaaagat gattttcttt aataaaatgg gtgaaggaga gcttgttgtc
     4981 aaaagtcaaa gtgtggatac aggacttaga atgggtgagg accaaggtaa gtcttgaggg
     5041 tgaaggttta agttttagcg aaatttatat gaatggcaga actttggatt tatcaggctt
     5101 aacattaaat tttgatcaaa ttaaaactga ctctaataat gtttttatca caagttctta
     5161 atcaggaata catttaaatt tagaaaacaa gcaagattat ctttatcatg gcaatatctt
     5221 ttcagatgaa gctgtaacaa tgagtgccaa tacagacaaa gctttgattt ttgatggtaa
     5281 tatttacaat aaagaaggtg tttttaggac agaaaatgcc aagttaaatt ttcaaggaca
     5341 tgctagaata cacgcttatg taagcaaaga acaagctaaa aaacttcaag aacatggttt
     5401 aagtgcttta actaagcctg taagttttac acaagaagat tgggaagata gggtttttgt
     5461 tttaaaagag cttaatttag aaaaaaagcg agttttattt agggcgtaat gtaagcttaa
     5521 aagtagaaaa ccttaatgct aaaaattcca aaatagagct tggaagtaaa aatttgtgga
     5581 tcgatgaaaa agatggggaa aatattattg ataagactga tgattattct tatggagatg
     5641 ttgtataaac aggagttggc aaagaaatgg cttttgagca aaagctttaa aatacccaaa
     5701 atgctaagat agaaaaggtt tattttagtg taaatttaaa tcttgatcat tctgatgtta
     5761 ctttgcaaaa cacatttttt agtggtaata tcaaaggtat caatgatacg caaaaaaaat
     5821 cttgcgatta aagattcttt gcttgagtct catatataaa tgagcaatct tcaagtagaa
     5881 aaaagtgcta tttataggaa agttgatgca aaaaaattaa gtgcaaataa tacaatattt
     5941 aaaatcaatg cggattttga aaattctaaa tcagattata ttaattctaa ggaaagcaca
     6001 caaggagtaa ataatacttt agtattaatt tttcttaata atcctagtaa aaagcgggtt
     6061 taaatatctt actagctcat ttaaaagatg aaaataaaca tttaacaaag gaatttttta
     6121 ctatgccaaa tgtgagcaag gttttagtac gtatacccca aatgttgttt tttctcataa
     6181 tgaggaaaat tttgcccaga gtggaattta gaaaaaattg attctaagat taaagatgaa
     6241 tattttttta ctaatgataa tactcaagct attgtaaaaa ctaaatctat acttgctcaa
     6301 gctattttag gctccatgat aggagtggaa taatatgcat aaaagaatgg gggaattacg
     6361 caataatcct tatgaaagtg gtgtatggtt aagaactttt ggatggggta cgagtgatga
     6421 gtataatagt ggaaaatact ttgaaattca aagcggacat gataaattaa acgagtattc
     6481 gaatttcgag ctttacagtg gagtaaggtt tttatagtga ttttgtttta gatatattta
     6541 ttatcaaaat gaaataaatg caaattttat tccaggaaat caaggtagat tagatgataa
     6601 tgatggttcg cataatatta tcttaagtgc tgagttaggt tatagaaaag cttatgataa
     6661 attttatctt gagccgattt ggaatttatc agtggttatg taggagctat ggatctaaaa
     6721 ggagatattg ctagtttaaa acgattttct tatattcctt tagtcgtaaa aacagcattt
     6781 ttcataggaa gtcaaaatta aaatttaaat tttagaacag gacttggttt gtatgcggat
     6841 ccgattaaag caggagatca aattttagag gatcaagcaa gtcagagaag atatgaagga
     6901 aaaaagatca aagaatgttt ataaatttag gaaatgatta taagcttaac gataaaacac
     6961 gctttaattt tgaatttgaa aagacatttt ttggcgattt aaatgtagat tggagtgcaa
     7021 atgctaattt aagatatagt ttttaaataa aaaataattt aaaaattgta tttttatttt
     7081 aagctttttt gtttataata cttgctttta catttaaagg ataaagatga aaataaaagt
     7141 tgggatttta ggagcgagtg gttatgcggg aaatgaactt gttcgcattt tgcttaatca
     7201 tcccaaggtt gaaatttctt atttgggttc gagttctagc gtggggcaaa attatcaaga
     7261 tctttatcct aacacccctt taaatttatg ttttgaaaat aaaaatttag atgaacttga
     7321 acttgatctt ttgtttttgg ctactccgca taaatttagt gctaaacttt taaatgagaa
     7381 tttattaaaa aagatgaaaa tcattgattt aagtgcggat tttcgtctta aaaatcctaa
     7441 agattatgag ctttggtata aattcactca tcctaatcaa gagcttttgc aaaatgcggt
     7501 ttatggactt tgtgagcttt ataaagaaga gataaaaaaa gcaagtttag tggcaaatcc
     7561 aggttgttat accacttgtt ctatcttaag tctttatccg ctttttaaag aaaagatcat
     7621 tgattttagc tcagttatta ttgatgcaaa aagtggagta agtggagcag gaagaagtgc
     7681 aaaggtggaa aatctttttt gtgaagttaa tgaaaatatc aaagcttata atttagcttt
     7741 gcatcgccat actcctgaaa ttgaagagca tttaagctat gcggccaaag agaaaatcac
     7801 tctacaattt acccctcatc ttgtgcctat gcaaagagga attttaatca gtgcttatgc
     7861 aaatttaaaa gaggacttgc aagaacaaga tatacgcgat atttatacaa aatactatca
     7921 aaacaataaa ttcataaggc ttttaccgcc gcagtcgctt ccgcagactc ggtgggttaa
     7981 atcaagcaat tttgcggata taaattttag tgtagatcaa cgcacaaagc gtgttattgt
     8041 gcttggtgct attgataatt taatcaaagg tgcagcagga caagctgttc aaaatatgaa
     8101 tttaatgttt gattttgatg aagatgaagg acttaaattc tttgcaaatt tgtaaaggat
     8161 aaaaatgtta atacgagcta tgcaaaaaag cgattatgaa gccgtttata agctttggtg
     8221 tgagataaaa ggctttggga taagaagcat tgatgatagc aaagaaaata tagaaaattt
     8281 tttagataga aacccaaatc ttagcgttgt agcagtgatt gatgaagaaa ttgtaggaag
     8341 tatactttgc gggcatgatg gacgcacagg aggattttat catgtatgtg tacataaaga
     8401 tcatagaaaa aagggcatag cgcacgagat ggcaaaattt tgtcttgagg ctttaaaagc
     8461 tcaaaagatt aataaaatcg ccttaatcgc ttttaaaaac aatgatttag gcaatgagtt
     8521 ttggaaacat tatggtttta ctttaagaga ggatgcgaat tattacgatc tttctttaaa
     8581 tgagtataat caaactagct ttaatgctta aggaatgatc atgcaaaaat atttagaaaa
     8641 agctaatgtc ttaatcgaag ctttgcctta tatacgcaaa tttaattcta agattatact
     8701 tataaaatac ggcggatcag ctatggaaaa tgaagagcta aagcattgtg tgatgcaaga
     8761 tatagctctt ttaaaactcg tgggtttaaa gcctattatt gtacatggtg ggggaaaaga
     8821 tatttctgct atgtgtgaaa aattaggcgt aaagagtgag tttaaaaacg gtcttagggt
     8881 tagtgataaa gccactattg aagtagccag catggtttta aatcatatca ataaaaattt
     8941 agtccatagt ttgcaaaatt taggagttaa agccataggg ctttgtggta aagatggcgc
     9001 gcttttagaa tgtgtgaaaa aagatgaaaa tttagctttt gttggcacga tacaaaaggt
     9061 aaattcgaaa attttagaag agcttttgga aaaagatttt ttacctatca ttgctcctat
     9121 tggcatggat gagaatttta atacttataa tatcaacgct gatgacgcag cttgtgcgat
     9181 cgctaaggct ttaagggctg aaaaacttgc ttttttaact gatactgcag ggctttatga
     9241 ggattttaat gataaaaatt ctttaatttc taaaatcagc cttgaacagg ctaaaatttt
     9301 agctcctaaa atagaaggtg gtatgcatgt aaaattaaaa tcttgcattg atgcttgtga
     9361 aaatggagtc aaaaaggtac atattttaga tgggcgtgtg aaacattctt tgttgcttga
     9421 gttttttacc gatgaaggta taggcacttt ggtgggttaa aggatgaaaa tggattataa
     9481 agaacaaagt catattatcc ctacctataa gcgttttgat atagttttag aaaaagggca
     9541 gggggtttat ctttttgacg ataaggctaa aaaatatctt gatttttcaa gtggcatagg
     9601 tgtttgtgct ttaggatata atcatgctaa atttaatgct aaaatcaaag cgcaagtgga
     9661 taagcttttg catactagca atttatatta taatgaaaat atagctgctg cagctaaaaa
     9721 tttagccaaa gctagtgctt tagagcgtgt tttttttaca aattctggta cagaaagtat
     9781 agaaggagcg atgaaaacag ctagaaaata cgcctttaac aaaggtgtta agggtggaca
     9841 atttatcgct tttaagcatt cttttcatgg gcgtacttta ggggctttat cgcttactgc
     9901 taatgaaaaa tatcaaaagc cttttaaacc tttaatttca ggggttaaat ttgcaaaata
     9961 taatgatatt tcaagcgttg aaaaactggt gaatgaaaaa acttgtgcca ttatcttaga
    10021 aagcgtgcaa ggagaaggtg gaataaatcc tgcaaataaa gatttttaca aagccttaag
    10081 aaagctttgc gataaaaaag atatattatt aatcgctgat gaaattcaat gtggcatggg
    10141 tagaagtgga aaattttttg cctatgagca cgcacaaatt ttgcctgata tcatgacttc
    10201 agctaaggcc ttaggttgtg ggcttagtgt gggtgctttt gtaataaatc aaaaggtagc
    10261 aagcaattct ttagaagcag gcgatcatgg tagtacttat ggtggaaatc ctttagtttg
    10321 tgcaggagtg aatgcggttt ttgaaatttt taaagaagaa aaaattttag aaaatgtcaa
    10381 taaactcacg ccttatttag agcaaagttt agatgagttg ataaatgaat ttgatttttg
    10441 taaaaaacgc aaaggcttag ggtttatgca agggctgagt cttgataaaa gtgtaaaagt
    10501 agctaaggtc attcaaaaat gtcaagaaaa tgcactttta ttaataagtt gcggggagaa
    10561 tgatttgaga tttttacctc ctttgatttt acaaaaagaa catattgatg aaatgagtga
    10621 aaagttaaga aaggctctaa agagttttta ataaattttg taaaaaaatt tattcttttc
    10681 catctactat aggcacaaat aaacattctt ctaaaatttc tttttgtaaa tttgtgccat
    10741 tttttctaag gcgtgtgatg aattgtttgc cattgtgtaa aataggagcg actaaaatac
    10801 cgtcatcgct taattgatca agtaaaattt caggaatttg tgtcgcataa gcagaaaata
    10861 aaatcctatc ataaggagca taatttttcc agccattttg tccatcatca aattttacat
    10921 tgatattaaa aagttctaat tctctgaaag tttgagcggc ttttttggct aaattttcta
    10981 tgcgttctat ggtaaaaaca cgccttatga ctttgcttaa aatcgcagct tgatagccac
    11041 ttccacaacc tatctctaaa atactatcag catttttaaa atctaaagcc atagtcattt
    11101 tagctacagt taaaggtgaa ctaatccatt gagaatttgc taaaggcaaa gcatcaaggc
    11161 gataagcatg ggcttttaaa ggagaaaaaa tttcacgtgg aatttgacaa aaagcattaa
    11221 aaagttcttc attgataaaa actttttgtg caatttcttc agccatattt tgacatcttt
    11281 tttgttcaaa tgcgttcatt acttctccta taaatttaaa taaaaattgt aactaaaaaa
    11341 gttgaaatag agttaaactt agctatactt aaataaaaag gaaaaaaatg cttataaaat
    11401 ttaaaaatca tagtcccaaa ctaggtcaaa atgtttttgt tgcagagggc gctaaaatca
    11461 taggagaaat agaaatagga gatgaaagta gtatttggtt taattgtgtt ttaagagccg
    11521 atgttaattt tataaaaatt ggcaaaagaa ccaatattca agatcttagc acagttcatg
    11581 tttggcatag ggaatttgat gaaaaaggaa agttaaaaga tgctggtttt cctacaataa
    11641 taggagatga tgtaactata ggacataatt gcgttatcca tgcttgtgtg ataaaaaatc
    11701 gtgttttaat cggaatgaat gctgttatca tggataatgc tttgatagaa gaagatagca
    11761 tagtgggtgc tggaagcgtt gtaacaaagg gaaaaaaatt tccgccacgc tctttgatac
    11821 ttggaaatcc tgcaaaattt gtgcgtgaat taaacgatga agaagtcagc tttctaaaac
    11881 aatccgcttt aaattatgtg gattttaaaa acgagttttt aaaagatctt cagtgatatt
    11941 ttgaagttta ggcgagagtt ttacttcaaa tttcacaaaa cgatcaagat ctaaaaaact
    12001 ctcatcgagt tttgaaattt gctcttttgt ataatcttga atagtattta aagatgactt
    12061 tttaagaagt cttttttctt tgtagactaa ttctaaaagt tctttgcgtt ctaaattttc
    12121 atcttgattt gggttttcgt caaaaacata aagttcatca aaaaggattt tttgcgtgtt
    12181 tttatcataa actctaaaaa gctttttaaa atgaggtagg gttgattttt cgttattttc
    12241 gctgattttg attttaggtt ttatgccttg atcttctaag gctgcgagtt tataaacgca
    12301 actaaaaata gggtcacttg aagcagtgat caatctttca cctacaccaa agatatcaat
    12361 aggtgcattt tgttctttga gttttttaat gctccattca tcaagtgcgt tagaaactat
    12421 gattttacat ttttgaagtc ctgcttgatc aagctcttgt ctgattttca aactcaactc
    12481 aagtaaattt ccagaatcta ttctcacgcc gccttcttga ataccaaatt ctttaaaaac
    12541 tttaatcgca tttttaagtc cgctatttag acaatcataa gtatcaatca aaaaaacagg
    12601 attttttgga taaattttca cataagcttt aaaagcttca agttcatttt caaacatttg
    12661 cacccaagaa tgtgccatag ttccattgat agggatatta taaatttttc ctgctaaagt
    12721 acaagcactt cctatgcaac ctcctataaa agctgctctt gctcctttta aggctgcttc
    12781 acttccttgt gctctgcgtg aaccaaattc taaaatttta ctgtctttag ctgcacgcac
    12841 gatacgattg gttttggtag caataaggct ttggtggttt aaacttaaaa gtaaaaaagt
    12901 ttctaaaagc tgtgcttcta tggttgtagc tttaatacat agcaaaggtt cgtttggaaa
    12961 aatcacttct ccttcacgca tagcataaat ttcaccctta aatttaaagt tagctaaaaa
    13021 atctaaaaat tctgtatcaa aaataccttg ttttcttaaa aattctatat cttctgcatc
    13081 aaaactcaaa ttttcaacaa agtctaaaat atcttcaaga cctgcaaaaa tagcaaaaga
    13141 tcctgaatct ggaatttttc taaaaaatat atcaaaataa caaatttgat cttttttatt
    13201 gtttttgaaa tagccttgag acattgtaaa ttcataaaaa tcacaaagca aggctaaaga
    13261 agttttagaa gtcatcaaag cttatactac ccttagaata attcgttact ttactttcaa
    13321 agaaattgct cttttgatcg ttaaattttg aaaaatcatc tacccattta ataggatgtt
    13381 ttgcattata taacttatct aaattgatcg cacttaatct ttgatctaca agataatgga
    13441 tatattcttc tatgatatca tcagtaaagc ccatgatttg attttgagtg atgtatttac
    13501 cccatttgat ctcaagatct ccagcttttt taaacatatc ataaatttta ttgatatttt
    13561 catcatggaa taaatcaggt ctttctttgc gtactgaatt gatcatattt tgaaataata
    13621 aaagatgtgt gatttcatct ctttggataa agcggatcat ttgtgctgaa cctagcattt
    13681 ttcctgcacg tgcaagtgcg taaatggcag taaaaccact ataaaaatat actccttcta
    13741 aaatttgatt tgccaccata gccaaaagaa gtttattatc atctacatcg cctgctaatt
    13801 cttcataaat acttgaaata aagtcatttt tttcacgcaa agtttcatca tgcttttcca
    13861 tttcataaat caaatctgta ttatcgcaaa tcgcttctac cataacagcg taagattttg
    13921 aatggtttgc ctcttcataa gcttggcgtg ccaaaaccgc attgatttca ggagctgtga
    13981 tgtaagggtt gatattatct gctaaattat tggtttggaa actatccata gaaataagct
    14041 gactccaaac caaatcatac attctttttt cacctgcagt taaattacag cgataatcaa
    14101 gtgcatcttt agttgtatcc acttcttttg gaaaccaagt atttgcctcc attaaatccc
    14161 aaagttttaa agcccaagta tattttgcct tagtgaaatt taaaattcca tgtgggttgc
    14221 catcaaaaac tttacgatct cctagggttt cgtttgaact tggattgtaa attctttttc
    14281 tttgcatttt taacctttct ttatgcttta gtagctatac aactttgagt taaaatatcg
    14341 tgtaaattta aacgatcttt tcttacaaaa ctgacaaata aaccaaagag taagccaaaa
    14401 cttataataa atatcacata tcttagtaaa attctaagaa aacttagttt ctttcccgtt
    14461 tttatatcaa taagatataa atcatatgct ttaagacctg ggctttgtgc cttttttgtt
    14521 aaaaaaatag cttgaatcaa accaaataaa aaagtacata aagttgtgat aaaatggttg
    14581 tttaaaaaag cttctttaga gcctaataaa aaataaaata aatacaaaat aggaacataa
    14641 ataagaaaaa tatctataag caaagctcta aatcttagcc atctagagct aatttttgct
    14701 ttagttttca tttaatttcc acggcttcct ggttttatag ctttattccc ttttttacaa
    14761 agtggacaat ttgtttcatc gtaaatttca aattcaaaat ttcctagagt aaagagtggt
    14821 aaattttcag gtaatttcgc attatctttt cttggagatt ttaaattttc tactgcacaa
    14881 aaaccacgat ttgccaatgc tgcaaaacct acaacaatac cacctaaact ttcaatgatt
    14941 tttgcactct ctaaagcact accacctgta gtaatgatat cttcacaaat tataaatttt
    15001 tcaccctttt ttacttcaaa accacgtctt aaagtcattt ctttatttac tctttcagtg
    15061 aagataaaac gtttactaca agctcttgca agctcataac ctgctaaaat tccacctaaa
    15121 gcaggagagc aaatgctatc aaattctatc ttatagcttg caataatctt tgcaagttca
    15181 tcacaaagtt ttgctgctaa ttttggatcc tctaaaactt ttgcactttg aagataaaac
    15241 tgcgaatgct tacctgaact tagtaaaaaa tgcccttcta aataagcacc acaatcttta
    15301 taaatttgct ctaaattcat cgttaaacct ttaaaagttc actttctttg ctttttacac
    15361 cctcatcaat ttttgttgta taggtgtcgg taagtttttg cacttcatca taagcttttt
    15421 ttgcttcatc ttcgcttatt gccttatctt tttctagttt tttaactgca tcgttggcat
    15481 ctttgcgtat atttcttata gaaacttttg ccttttcacc catagcttta gcttgtttta
    15541 cgttttcttc tctttgctct ctagtcatcg gagggaaaaa taattttaca ctttcgccgt
    15601 cattgtttgg attgacaccg atatttgcag ctgcaatagc gctttctatg gtttttagta
    15661 aaggtttttc ccaaggagtg atgctaatag ttgaagcatc acttgctaaa acagttgcta
    15721 cttgatttaa aggagtttga gttccataat aatccactgt aatatgatct aaaatatgga
    15781 tattaacttt tccagttctt aaagtggtaa agtctttttt taaggcttct aaagattttt
    15841 cactttgggt tttttgtttg ttaaaaattt catttagcat tatcatttcc tttaattatt
    15901 tacttgaatt aacatcgctt ggaagttgtg gtgcacttgg agcgatagaa tttgtgtttg
    15961 gggtagtagg cacaatagga gcacttcgaa tagtagtgtt gttgttttct actttaattt
    16021 tctctgctag agagtccttg ctagctttat tgtataaata accaagacca atagtatttg
    16081 caataagtaa aattcccatg acaaaggtaa attttgccaa aaatccagcc ggtcctttgg
    16141 cgccaaataa actttcattg cttccactat aagctccaag tcctatactt gaactttttt
    16201 gaagtaaaac tgctatacaa ataactacaa cgatgataaa ttgtaaaatg attaaaagag
    16261 tgatcattga aatttcctaa aagttaattt ttaaatgatt attttagcta aataaaactt
    16321 gaaaagtttt gaaacttgaa aagtttttgt gagaaaaatc ccacaaaaac ttatctgcta
    16381 ttgaagcttc ttaagatatt aagtaaagat acgaaaagat taacaaaatc aagataaagt
    16441 gctactgcac cttcgattgg agtttcataa tttccgcgga taatattttg cgtatcataa
    16501 agaatgtaaa atgaaaataa tattgcagct actgctgaaa tagctagatt aactatactg
    16561 ctttggaaga aaaggtttag taaagatgct gctacaataa cgattaatac tataaataaa
    16621 gctttaccca taacagtaaa atcttttttt gtattcatag caaatacact aagtcctgca
    16681 aaagcaactg ttgttaaagc aaaagcttga gcgatgataa ttcctccagc tggtagagct
    16741 aaaactgaaa taagtaaagg tgtaagcgtt aaacctgagc agaaagtaaa accaaaaagt
    16801 aaaacaagat ttaatggagc ttctcttttt ttccattgca aagcaaataa aagtccgatt
    16861 tcaacagcaa aaaggatcca aaaagttact tgtgattgta taaaaaatga tgctaaagca
    16921 aaaattccta catacgcacc tactgttgca gctaataatg aagcagcaaa aagttgataa
    16981 gtttgtttaa taaaaatact taattcgctt gagcgtgtat tttcaaattc ttttgatctt
    17041 gagtagtctc tatcataaag actcataaaa ttctccttgc aaaattgtta gattttttaa
    17101 aatcttgagc gaaatctaac atattagact aaataaaaag ttaatttata taatatctta
    17161 tgcttaaatg aaatctttgc tgaaattttg ttataatttc aagattttag tttcaggttg
    17221 gttttatgga aaatcttatt agcggtgcga ttaagtttat gcaagaagac tttaaggagc
    17281 atgaagaact ttttgaaagt ctaaaaaata agcaaaatcc ccatactctt tttataggtt
    17341 gttctgattc tagagtaatt ccaaatttga tcactaatac gggtccaggt gagctttttg
    17401 taatacgaaa tattgcaaat atagttccac cttatcgcgt tggagaagat tacttggcga
    17461 caacttcagc aatagagtat gctttaaatt cattgcatat taaaaatatc gtcgtttgtg
    17521 gccatagtaa ttgtggaggt tgcaatgctc tttattattc tgatgaagag ttaaataaaa
    17581 ttcctaacgt gaaaaaatgg cttactatgt tagatccgat aaaaaaagat gtgatgattt
    17641 ttgcaagaga cgatttggct atgcgttcat ggcttacaga aaaattaaat ttagtaaatt
    17701 ctttgcaaaa tatacttact tatccaggcg tgcaagaagc tttagatgaa ggaaaaatag
    17761 aagtacatgc ttggtattat attatagaga caggtgaaat ttatgagtat gattttaaag
    17821 caaaaatttt tactttaata caggatagga aagttcaatg aaaaaaatta tttttagttt
    17881 atgttttttt attttacacc ttggagcaca agaatttaaa tttattgatg cgaatattag
    17941 taaagaagat gaaggaattt atgctttagt tgaaaaatat gttgatctta acaatcaaat
    18001 taaagaattt aagaaaaaca atgatgaaaa ttcaagcact tttaatggta ttttaagtga
    18061 atttgaaaaa gacaaaaaga ctattttagc aaaaataccc gatatgatag taggacaaaa
    18121 gattaatgaa gaggcagtgg ctagattttt aaaagcaaaa gaaaaattac tagatgttca
    18181 aaaaaagaat attaataagc cttacattta tacagatgcc actcttaatc tagtttattt
    18241 taacattgtg gaaagttttt attcttcttt gtttgaagtg gaaaaacttt ttaaaaatac
    18301 agcaagcagt gaagatttga ttgctactgt tgataaggca atggaaaatt tacaaaattc
    18361 ttctaatgtt aatttagata gttttaaaag caaaattaca aatccagaag aattagaaaa
    18421 aattacccta aaagaaagat atatcagtaa tgccgtagat tcttattctg aaattcttaa
    18481 gtatttacgt tcaaatgcag atttgcttga aagtaattat attttttcat tactcgagct
    18541 tcaagtttgg atagatcgta taaatgaggc aattggggta agttttgtta atatcggaaa
    18601 aatagtaatt tctgctttgg ttttagtatt ttttatatct ttaagacgtt tttttgcaaa
    18661 tatagtatat tttttccttg ttcagctttt ttatagaaat aaaaatgatg tagatgatat
    18721 taaagtcatt tttattgaga atattaaaaa acccgtaggt ttcttgttga ttgtctatgc
    18781 tatttctctt tgtcttacta tagcaactta tcctgcacct ttgagtgtaa atttaagtaa
    18841 tttttttcat atagtttatg cagttttaat tgcatggctt attttaagaa tgcttgatgg
    18901 ttatggcgtg gtattggttt ctaaacttgc tcaaaaaagt ggaaaaaaag aagttgtaaa
    18961 tttaattatt aaaattttat attttgtcat tattatcata gctttattat atattcttgc
    19021 tcaacttggt tttaatattt cggctattat tgcatctttg ggaattggtg gtttagctgt
    19081 tgctttagcg gcgaaagata tcattgcaaa tttctttgct tctatactct tactttttga
    19141 taatagcttt aatcaaggag attgggtaga ggtttcaggc atagaaggaa ctgtggttga
    19201 aacaggactt agaaaaacta ctattagaac ttttgataat tgtcttgtat ttttaccaaa
    19261 ttcaactatt atgggagcta atatcaaaaa ttggagcaaa agacgcatgg gtcgccatgt
    19321 tagaatgtat ttgggtgttg gttatgatgc tactcctgaa aaactagaac aatgtgtaaa
    19381 agatctaaga gaatttttgc atacaagtga tttagtagct cacgatgagg atagcgcatt
    19441 aaaatatggc gatcatacaa caaaatatcg tcaaaatctt gtatctatta atgatttaga
    19501 aggctataaa aatgcttgtt atgtggcttt aagtgaattt gcagatagta gtattaatat
    19561 agagctttat ttttatatca aagaaatagg tggaaaagat tttagagaag ctagacaaag
    19621 tttaatgctt gagtttatgc gtataattga aaaaaatggt ttaacctttg ctttcccaag
    19681 tcgtagtatt tatatagaaa atttaccacc ccttgatttg caagcaaaag ctataaaata
    19741 gcaagatttt atcttgctat tttttaaacc ggcataacgc gtatatttgg acttaattct
    19801 tcttgtaaaa ttgtttcaat agcataaagt gttgcaccac ttccactaga acaaccacta
    19861 caagcaccaa gataacgaat ataaacatca attgctgcac cttcagcctt ttgtatatca
    19921 atcacttcca aatctccgcc atcattatga agcatagggc gaatttcagc atctaaaaca
    19981 ctttcaactg cttttaattg tcccactacg gtcatttcat caaaagctac atcacttttc
    20041 attgtatttt tgagtttttc tctatctatt tcagctctag tttcagctaa aatatctaca
    20101 aggtaataat ctcttttttc atgtccgcct ggtttgatac aggatttaca aaaagcaccc
    20161 gctttagtgt attgtgtgat ttcttctacg ctatgcaaat cattaagttt aatcacttct
    20221 ttaatagttc caagacttac cctagcgcat tcgcaaacta taatttgatc ttcaaaatct
    20281 tcaggactta tacctttata atgcgctgct gcttgtttga ttacatcata agccataacc
    20341 gaacagtgca ttttttgagg tggaacagct ggagtttctg gattatcacg catagcaaat
    20401 tccacatcta aatttgtgat ttttactgct tcatctacag tttttcctat acaaagatcc
    20461 accatagtat cactacttgc tatagctgta ccacaaccaa aacttttaaa ttttgcatcg
    20521 ataattttat cagttttttc atctacaagc caaaaaagtc ttactgcatc gccacaactt
    20581 tctgcaccaa aatcagctac gatcaatttt gcattgcgtg ctttagcatc ttcttcacta
    20641 aattctccca tatgttgagg attattcatt ctatcttgaa ctttttgtga atactcatcc
    20701 caaatggatc caccaattaa actatttttt cccatttttc atccttattt gtaattattt
    20761 ggattataag cataagtaca agaaattgct cttaatctct gtgttgcatt tttaatttgt
    20821 tttgctgcat aatcaatttc ttcttcagtg ttaaaacgtg acaaagaaag ccttaaagct
    20881 gtatgcgcta aatcatgctc cgcaccgata gcttccataa taggattgct ttctaaagct
    20941 tcacttgcac aggctgagcc cgtacttgca gctataccat ttttatttaa atcccaaagc
    21001 attgcttcgc cttcaacacc tttaatactt gctaagattg tattaggcac acggtgttcc
    21061 ctttttccaa ccactgttgt atcgggcaag gccaaaattt gatcttctag tttatctctt
    21121 aaacggcgta tatgagaatc ttcaaaatca agcatagtat ttgcaatacg caaagcctcg
    21181 cccatagcca ctatgtaagg cacatttaaa gttccgcttc tacgaccacc catgtgttct
    21241 ccaccgtgta aaagtggagt aagtttaagt ccttttttta taaaaagtcc acccacaccc
    21301 tttggtccat gaaatttatg tgccgaaaat gaagcaaaat caactcctac ttgagttaaa
    21361 ttaaccttta ttttacctac tgcttgagta gcatctgtat gaaaaagagc accaaattca
    21421 tgcgcaagtt ctgccatcgc tttaatatca aaaatcatac ctgtttcatt atttgcccac
    21481 ataacactta caagtgctgt tttatcgcta atcactttac gcaaatcttc tacagtagaa
    21541 accccttctt cgtttacagg aagttctata acttttactc caagactttt taaaaaataa
    21601 gcagcagcag taacagcagg gtgttctaca ctagaaataa tcacttcatt gcgttcttta
    21661 tctaaaatat gatcaaaata cacaccctta agcacccagt taatgctttc tgtcgcacag
    21721 gaggttacaa ctatgtcatc taggtcattt gctccaagtc ctgcataaag tttatccaaa
    21781 gcttctctta aggcaggatg tgttgcgcta ccatattgat gaaggctatt tggatttcca
    21841 tacatatcct ttaaaaaagg tagcatcaac tcataagcat taggatcaag cattgtcgtt
    21901 gcgttgttat ctaaatatac tttcacttta aaatccttaa tttatcctta attttaatta
    21961 ggatattttt tatctttatt taaaaacgga taataacaaa aatttataaa aattaggtta
    22021 aaaattataa caaaaataaa atgctaaagt aaaattttaa agtgaaatat tttgtgaatt
    22081 ttatatagca aaaatgagaa atactatttc ttaaattttt cttcgtaata ctttactatt
    22141 tttgaatctt ctttggctgt atgtttaaag ataaaatctt gaacaacgag atttaatttt
    22201 tcggtcatta tatttacaaa tttagcttca ctgatgataa tttcttcaat ttctaagata
    22261 atttttctgt gaattcttgt atgatggttg atataaggat attctatttc tctcataaag
    22321 gcttcttcat ctgaaaaatg tctattgatc attattaaca actctcttaa gacaattttt
    22381 aattcttttg ttccaacatg acgttggttc attaaagaga gttttttaga aatttcaaaa
    22441 agttctttat gttgatgatc taaaagatca ttattcattg aaataatttt ttcattataa
    22501 gtcatggttt tgagtacttt tatatttata ttttttgag
//
LOCUS       DAPIYB010000021        22176 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.021, whole genome shotgun sequence.
ACCESSION   DAPIYB010000021 DAPIYB010000000
VERSION     DAPIYB010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 22176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22176
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.021"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..497)
                     /locus_tag="RJ318_000618"
     CDS             complement(<1..497)
                     /locus_tag="RJ318_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430511.1"
                     /translation="MKILLLNENPVVSRLVSLSAKKMSYDFEELNAYSENLGNYDVIV
                     VDSDTPAPLKILKEKCDRLIFLAPRNQNVEDIDAQILQKPFLPTDFLNLLNNKDANKH
                     TSIDLPMLSNDENPYADISLDLDNLNLDDLPDENSLDINSEGMEDLSFDDDAQDDNAS
                     KTLET"
     gene            complement(554..1321)
                     /gene="fliR"
                     /locus_tag="RJ318_000619"
     CDS             complement(554..1321)
                     /gene="fliR"
                     /locus_tag="RJ318_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HDV7430512.1"
                     /translation="MEFVNYLGDKNVVTFMLLLARMSGLIVFFPFFSHNSIPMVIKST
                     IVLFLTMYLYPLARLESLHLDSFFVLQLISEVIFGMIAGLMLQIIFVIIMMAGEQIAF
                     TMGFTMASILDPSSGTSMPITSQILNLLALMFFLAFDGHHLMLLFLSHSLGYISLGGF
                     YPHENLMHYLNMGMFNIFIIGFTMSFPILGISLLADVIFGLLMKTMPQFNLLVIGYPI
                     KIALGFVVLIAILLVMMQYFKNLILELFTHMQTLFFF"
     gene            complement(1308..1943)
                     /locus_tag="RJ318_000620"
     CDS             complement(1308..1943)
                     /locus_tag="RJ318_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7430513.1"
                     /translation="MELLRAENLSHSFDYPLFEGLNLTLNTKDCIAIQGSSGCGKSTL
                     LHILSSLLIPKKGEVFFKGSSLYQIDENERLKIRRYDFGIIFQTHYLFKGFSALENIE
                     LASVLSGQDLDEKILKRLGIDTLLHQKIGKLSGGQQQRVSIARVLCKKPKIIFADEAT
                     GNLDFDNAKNVIELLISYVKENDAALFFVTHDSKLASFCDKTYTINANGIC"
     gene            complement(1956..3029)
                     /locus_tag="RJ318_000621"
     CDS             complement(1956..3029)
                     /locus_tag="RJ318_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDV7430514.1"
                     /translation="MAEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREK
                     GLGKAAKKADRLAAEGLVSVKVSDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHI
                     QSNSLQSVEELHSSTINGVKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHT
                     NGRVGVVIAAACDSTEVASKSRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALV
                     AELEKENEERRRLKDPNKPEHKIPQFASRKQLSDAILKEAEEKIKEELKAQGKPEKIW
                     DNIIPGKMNSFIADNSQLDSKLTLMGQFYVMDDKKTVEQVIAEKEKEFGGKIKIVEFI
                     CFEVGEGLEKKTEDFAAEVAAQL"
     gene            complement(3029..3820)
                     /gene="rpsB"
                     /locus_tag="RJ318_000622"
     CDS             complement(3029..3820)
                     /gene="rpsB"
                     /locus_tag="RJ318_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDV7430515.1"
                     /translation="MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKT
                     LRYFRYTYNIVRDAAAEGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNF
                     GTIRQSIRKLEVIEKMEEDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIF
                     VIDTVKEKIAVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEA
                     INEGKALREQDGEALANEEKEITDEEKKEVLDEAMSEEDFGEEQE"
     gene            complement(3936..5099)
                     /locus_tag="RJ318_000623"
     CDS             complement(3936..5099)
                     /locus_tag="RJ318_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV7430516.1"
                     /translation="MLEKQMIKFILSKWNYGNFRIVFWDQEEFHVGNQPAKFSLIFKE
                     KIPFLKLFSDTSLVFAKHYMESKLEIEGDYDEIAKVLYYFSNKRFLKNTEDILSKIAQ
                     KQESKNIKSHYDIGNDFYKLWLDDTMSYSCAYFKEPNNTLYEAQINKIEHTLKKLDLK
                     EGEKLLDIGCGWGWLSIMAAQKYGVKVVGITISEEQCKKAKERVKELGLEDKIEIRLQ
                     NYQDLEFENYFDKVVSVGMFEHVGKENLGLYFMKVKQVLKPGGSMLLHSILAMFEGKT
                     NAWIDKYIFPGGYLPSLREVVSAMSEWDFHLLLAESLRMHYAKTLDLWDENFNKVLDK
                     VREKYDEEFIRMWDLYLRSCASAFRVGSVDLFQFLITKEINNNLSLTKDYIYK"
     gene            complement(5227..6351)
                     /locus_tag="RJ318_000624"
     CDS             complement(5227..6351)
                     /locus_tag="RJ318_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDV7430517.1"
                     /translation="MREIKIFLVVVVFTALVYWGVEPYAHSVMKPHVAPANFDFAVED
                     TTFAKGIVEAKELALKDAQASGDAKRIESANKELEKAKEELSKVETLWADVAKIDFAK
                     GDAKKGKEFFENNCFACHGVKEDGIAANITDSSMGVIPPDLSAAGAIFDEKFLAALIM
                     HPALALKVDHKFGDAFIMTAYNKDTSGESEEATNANIANVIAYLKDVSVKFEANEDAT
                     IKKDVEAKYAKMENSAQKAALMEKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQND
                     LKTYLGSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVGLTEAAQAKVVSYID
                     QVGDSKKEERKTTGIYVMIFFVILSIFAIGWKRSVWSKLH"
     gene            complement(6348..7598)
                     /locus_tag="RJ318_000625"
     CDS             complement(6348..7598)
                     /locus_tag="RJ318_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HDV7430518.1"
                     /translation="MAQIRKANGLVDWLDQRLAVHKLLDVLMVKYWIPKQINFLWAMG
                     VILTTLFAVLFVTGLLLVMYYKPDTALAFDSVNKTIMQEVDYGWLWRHMHGVAASVVF
                     LIIYIHMLTGIYYGSYKKGREMIWVSGMLLFVVFSAEAFSGYMLPWGQMSYWAAQVIT
                     NLFGGIPFIGPELVIWIRGDYAVSDPTLTRFFMLHVCLLPIVIIAIIAFHFYSLRIPH
                     VNNEISEELDFDLEAEKYMAGDTKGSKVIPFWPGFLSKDFMYISFFMIFFFYLVCFKF
                     EFAMDPINFDPANALKTPAHIYPEWYFLWSYEVLRGFFFDIAGIKAFDIGLAAFGIAQ
                     VIFFLLPWLDRSDVVKPAHERPLFFIWFWILLIDLIVLTVYGKLPPTGVNAWVGFYAS
                     IVFLLLLIVVLPVITIMERKGAKQ"
     gene            complement(7600..8103)
                     /gene="petA"
                     /locus_tag="RJ318_000626"
     CDS             complement(7600..8103)
                     /gene="petA"
                     /locus_tag="RJ318_000626"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HDV7430519.1"
                     /translation="MATSESRRSFMGFAFGSVAAVGGVFSLVAMKKTWDPLPSVKAAG
                     FTTVDLSGMQDGELRTIEWRKKPIFILKKDASMPKDEKRDVVVDNAAYTVVIGLCTHL
                     GCIPAYQPSEQLFKCACHGGEFDTSGKNVFGPPPKPLEIPPFKIDGTKLVLGEEGPEY
                     KKMIAEA"
     gene            complement(8194..9480)
                     /locus_tag="RJ318_000627"
     CDS             complement(8194..9480)
                     /locus_tag="RJ318_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HDV7430520.1"
                     /translation="MLAFFIFLSTLVLLFWRPWNLPIWVFSSLGAFFVFIFQLVDFKD
                     ACFVFSLVWDSSLTLVGLIILSFSLEALGFFDFIASKILYFSREKNQEKIYISTKKMM
                     LFLLIFVFFLSAFFANDGAILIITPIIIALFSTLKDCKNHAFILSSFLLSLSFLCDAS
                     SNALVISNLTNIITANYFKIEFLEFAKNMFLPNFFVLLSTIVTVFVLYVRVLPKRLEF
                     KLIKKEQISLKLFFLCIVFLFLFVISFFIGEIFNIKISFFALLWAGIFWLIILKIQGK
                     KSIKILFEAPYGVLLFSFGLYMVVFALHKIGVSEILVKSYAFLMQDKSGIFGVALISA
                     FGSSVFNNLPMVLIGDLALKEYFENFSFDSLMIYAHLLGVNIGPKLTPIGSLATLLWL
                     GVLARKGINISFWQYCKFGFLITLPVLVFSLFALIV"
     gene            complement(9481..11340)
                     /gene="mnmG"
                     /locus_tag="RJ318_000628"
     CDS             complement(9481..11340)
                     /gene="mnmG"
                     /locus_tag="RJ318_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDV7430521.1"
                     /translation="MFDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNP
                     AIGGLAKGHLVKELDAMGGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRII
                     ARNKLLKLPNLEISQEQASVLIVENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHV
                     GENKLQAGRVGELASVNLGNYLQTLGLKMGRLKTGTCPRVDAKSIDFSVLEIQDGDVN
                     PKAFSFRSRNFNPTQLPCYIARTNTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIED
                     KINRFSDKESHHLFIEPQTIDATEYYINGFSTSLPYEVQTQMLRSVEGFENAKITRFG
                     YAIEYDYIEPTELKHTLELKKIKNLYCAGQINGTTGYEEAAAQGFMAGINASLSIDMK
                     EPLILRRDEAYIGVLIDDLVVKGTKEPYRMFTSRAEFRLLLREENAILRLGKYGYDLG
                     LLSEQDFTYIQNIANNLQKGLEFLLSKEFTPNNQNNAFLESLGEDKISSIVNLQKIVA
                     RASFDIEKLKKLDPIFETMDHYSLREILNEAKYYHYISMQKAQVEKMKNLSELKIPEN
                     FDFKSVSGLSNEVVEKLNHYKPPTIFAASQISGITPAALDILQIYIKMQKKKA"
     gene            complement(11428..11925)
                     /gene="cetB"
                     /locus_tag="RJ318_000629"
     CDS             complement(11428..11925)
                     /gene="cetB"
                     /locus_tag="RJ318_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetB"
                     /protein_id="HDV7430522.1"
                     /translation="MSREIFLQEDSLITSKTDLKGKIVYANDDFLKYAGYTMGEILNK
                     PHNIVRHEEMPKTVFKYLWDYMKEGKEIFAYVKNKTKDNNYYWVFANVTPSIDVNNNI
                     IGYYSVRRMPNKSAISTIESLYSDLLRAEQQQGLNKGVEMLKNFCKDADKTYNELIFS
                     LQEAK"
     gene            complement(11943..13322)
                     /gene="cetA"
                     /locus_tag="RJ318_000630"
     CDS             complement(11943..13322)
                     /gene="cetA"
                     /locus_tag="RJ318_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bipartate energy taxis response protein CetA"
                     /protein_id="HDV7430523.1"
                     /translation="MVKNGLLLTIFLSVIGVLGVIFIHIFVGAIIFVLIAVLMIYLLR
                     QHKDEQIMIDKLLVLCRELKEGNFDNRIIYVKTKSKKLAEIADNLNNTIDGLEAYLRE
                     INTSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEVTARSTFKNALSRTLMD
                     LSLGNQNKDMSQISSSLNQDISMMKNVYDTVDAISHTATENGSEVDSLQSAMGSLMDV
                     VNSSKETVQTFVANSQNITSVVEVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVAD
                     EVRKLAERTQRSTSEISIAIQTMQQDFVNIQSGSEQVFNIVSESEERINKFSQAFKRL
                     EENSSALGVNFGSFAKRLILSVVKIDHILYKSNIYLNLNGAQNFNLESVDPISNLCQD
                     ERAQGVINELSSETELNLAKEFIKDNAKKAIEESSQDYIDQKAYDAIVNDIKSLEQRS
                     AEILAKLKI"
     gene            complement(13427..13921)
                     /gene="cetC"
                     /locus_tag="RJ318_000631"
     CDS             complement(13427..13921)
                     /gene="cetC"
                     /locus_tag="RJ318_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetC"
                     /protein_id="HDV7430524.1"
                     /translation="MKEIVLSENALITSKTDLKGNIIYANNDFLKYAGYKVDELLYKS
                     HNIVRHEDMPRTVFKCLWDYIQKGDEIFAFVKNKAKDGNFYWVFANVSASFDTNGNII
                     NYYSVRRAPNRKSLSIIEEVYKILLEKEQKSGINAGVSALMDIVSSYKMTYNELIFNL
                     QENN"
     gene            14191..15566
                     /locus_tag="RJ318_000632"
                     /pseudo
     CDS             14191..15566
                     /locus_tag="RJ318_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344583.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
     gene            complement(15563..16369)
                     /locus_tag="RJ318_000633"
     CDS             complement(15563..16369)
                     /locus_tag="RJ318_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter beta-barrel
                     domain-containing protein"
                     /protein_id="HDV7430525.1"
                     /translation="MRGIFYIIALFSLLNADELTEALAKNNNQNSWEHFDYENTKEAP
                     KIQEENVDFKSTFDSLLSKTLENNNGIDKTDGNLDFQNENAQVKNLSSLYEGENNSLL
                     FQKELFVAQDNYNYSWGLINRYEKDDFLFGVNGFIDKQKEQKDTKSFGTEFGYSKFIK
                     AYSNYYIPNEAEKNLQLGMSFVIPTYTAFAFDISKDNDKTNYQVSYSPYSVFSLNLLR
                     RDYSARETIDDTVVQVGFSFNFNESFLKQFRKKDNTLEEVNRYDFLQRTH"
     gene            16511..18037
                     /locus_tag="RJ318_000634"
     CDS             16511..18037
                     /locus_tag="RJ318_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDV7430526.1"
                     /translation="MQKDNLIAFVIFIISTIAFVIWGFGYISQHQLILFILASIFGIF
                     MAFNIGGNDVANSFGTSVGAKTVTIKQALIIAAVFELSGAIFAGAEVTKTIRSGIVIF
                     PNSLDPMLFVIIMLAALLSSGVWIFIATKKGLPVSTTHSIVGGIVGASIMMGLLKFDG
                     IQTLSMIKWSEILRIAISWIASPLLGGIVAYIIYSYIDKKILKPSEKLNDDLKNIKKE
                     RKKFKEEYFLNLKTKSQEEQIKELSAIALDEEEQENNFYRNKMKEFKDQEKDIDIYSI
                     LKTHMPIIACIAAAIISAMFLFKGLNNVSTLDILQNFWIIGIIGTISYVVTFAIVKIV
                     KKTELNKTTDRIFSWFQIFTASSFAFSHGANDIANAIGPFAAILDVLKNGTINATSPV
                     PFAALAMFGVALVVGLWFLGKEVITTVGSKLATIRPTTGFSAELGASIVILLATQFGI
                     PVSSTHILIGAILGIGVYNKNANWIMMKPIGLAWIITLPAAGIMAALVFLGFKLSLGI
                     "
     gene            complement(18045..19223)
                     /locus_tag="RJ318_000635"
     CDS             complement(18045..19223)
                     /locus_tag="RJ318_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDV7430527.1"
                     /translation="MIIKNAKIYGDSLQDIEIKEGKITNIDSNLQGEEILDAKGMTLL
                     PSFVDLCVSLKNDKFSLANLELLENECLKGGISSIVLRDCMDFDEESFALFLQNLAQR
                     KMQIFSSVRVKDTNGKLKNLATLLNKGACALELDSSLDANTLKVSSQYAFMKDSPIFV
                     RCYDKDFDDNGVMNDCEMSFELGLIGMSKIAETSQIAKMKELAKFYKNKVIFDLLSLK
                     DSLVLLDEKDLKLVSIHHLIKDDSACEDFNTAAKLMPPLRSKEDVLALREALKEGKIS
                     FLTSLHSAKSISLKDLAFDEAAFGIHSVCEFISLCYTFLIKEGFLNWQELCRFTSKNP
                     SEFLGLNSGVIEVGKEANLVLFDENEEIFAPKSSLYSEDKLFGKIKMHIIKGKNILEK
                     "
     gene            complement(19233..20129)
                     /locus_tag="RJ318_000636"
     CDS             complement(19233..20129)
                     /locus_tag="RJ318_000636"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDV7430528.1"
                     /translation="MMRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKE
                     ALECEYLVFALSSQGMRAWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKEN
                     FCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGA
                     YKNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGTKEETFLGLSGAGDLFL
                     TATSVLSRNYRVGLKLAQNQKLDSILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNE
                     VVAIFKGKSVQEATQNLLKQND"
     gene            complement(20126..21544)
                     /gene="gatB"
                     /locus_tag="RJ318_000637"
     CDS             complement(20126..21544)
                     /gene="gatB"
                     /locus_tag="RJ318_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HDV7430529.1"
                     /translation="MFEVVIGLEVHAQLNTKTKIFCSCATSFGEAPNTNVCPTCLALP
                     GALPVLNEEAVKKAIAFGKAVNATINKKSVFNRKNYFYPDLPKAYQISQFDIPIVEKG
                     ELFINVKGENKRIGITRAHLEEDAGKNIHESNFSKVDLNRAGTPLLEIVSEPELRSSD
                     EAVAYLKKLHSIIRFLDISDANMQEGSFRCDANVSIRPKGDTKLYTRVEIKNLNSFRF
                     IQKAIEYEVKRQSEAWEDGTYEQEVVQETRLFDTTNLVTRSMRGKEEAAEYRYFPDPD
                     LLPVLLKDEFLDIKIPELPDEKKVRFIDKLGIKESDAEVLISSLEMSRFFESLISQNL
                     NPKLCVNWLNTELMGLLKGELTIENSPVDAQKLGVLIKRIEDGTISAKAAKDVLAFVF
                     ENTSVEIDEAIEKLGLKQVSDDSAIEAVIEQILNANADKVAEYKSGKDKLFGFFVGQT
                     MKEGKGAFNPAKVNEILKTKLG"
     gene            21659..22153
                     /gene="luxS"
                     /locus_tag="RJ318_000638"
     CDS             21659..22153
                     /gene="luxS"
                     /locus_tag="RJ318_000638"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDV7430530.1"
                     /translation="MPLLDSFKVDHTKMPAPAVRLAKVMKTPKGDDISVFDLRFCIPN
                     KDIMSEKGTHTLEHLFAGFMRDHLNSNSVEIIDISPMGCRTGFYMSLIGTPDEKSIAK
                     AWEAAMKDVLSVSDQSKIPELNIYQCGTCAMHSLDEAKQIAQKVLNLGISIINNKELK
                     LENA"
BASE COUNT         7660 a         4008 c         2859 g         7649 t
ORIGIN      
        1 tgagtttcta aagttttgct tgcattatca tcttgagcat catcatcaaa actcaaatct
       61 tccattccct ctgaatttat atctaaagaa ttttcatcag gcaaatcatc taaatttaaa
      121 ttatctaaat ccaagcttat atcagcataa ggattttcat cattgcttaa cattggcaaa
      181 tcaatagatg tatgcttgtt cgcatcttta ttattaagca aatttaaaaa atctgtaggt
      241 aaaaaaggtt tttgtaaaat ttgcgcatct atatcttcta cattttgatt tcgcggggct
      301 aaaaaaatca atctatcgca tttttcttta agaattttta aaggtgctgg agtatcacta
      361 tctacaacaa tcacatcata attacccaaa ttttcactat aagcattaag ttcttcaaaa
      421 tcataagaca tttttttagc actaaggctt acaagtcttg aaactacagg gttttcattt
      481 aaaagtaaaa ttttcatcac tttaatcctt aaaaaataat cgctatttta cgataatttc
      541 atttatcctt tccttagaag aaaaaaagag tttgcatatg agtaaaaagt tctaaaatta
      601 aatttttaaa atattgcatc ataactagta aaatagcaat caaaactaca aaacctagag
      661 ctatctttat aggatagcca ataactaaaa gattaaattg tggcattgtt ttcatcaaaa
      721 gtccaaaaat aacatcggct aaaagtgaaa ttccaagtat aggaaagctc atagtaaaac
      781 ctatgatgaa aatattaaac atacccatat ttaaataatg cattaaattc tcatgcggat
      841 aaaatccacc taaactaata taacccaaag aatgacttaa aaacaaaagc attaaatgat
      901 ggccatcaaa agcaagaaaa aacatcaaag caagtaaatt taaaatttga gatgtgatag
      961 gcatactcgt tccagaactt ggatctaata tacttgccat agtaaatccc atagtaaaag
     1021 caatctgctc acctgccatc ataataataa caaaaataat ttgaagcatt aatcctgcta
     1081 tcattccaaa aatcacttca ctaataagct gtaaaacaaa aaaactatct aaatgcaaag
     1141 attctaatct agccaaagga tataaataca tagtcaaaaa taaaactata gtacttttta
     1201 tcaccatagg aatagaatta tgtgaaaaaa aaggaaaaaa aactataaga ccactcattc
     1261 tagcaagaag caacataaaa gttacaacat ttttatcacc taaataatta acaaattcca
     1321 ttggcgttta tagtataagt tttatcacaa aaacttgcaa gcttgctatc gtgagttaca
     1381 aaaaataaag ctgcatcatt ttctttaaca taggaaatta aaagttcgat aacattttta
     1441 gcattatcaa aatccaaatt tccagttgct tcatcagcaa aaataatctt tggtttttta
     1501 caaagcacac gtgcgatact cacacgctgt tgttgtccgc cgctaagctt tcctattttt
     1561 tgatgtaaaa gcgtatcaat acctaacctt tttaaaattt tctcatctaa atcttgacct
     1621 gataaaacac tagcaagttc gatattttct aaagccgaaa aacctttaaa aagataatgt
     1681 gtctgaaaaa taataccaaa atcataacgg cgaattttta atctttcgtt ttcatctatc
     1741 tgataaagac tagaaccttt aaaaaaaact tcaccttttt ttggaatcaa taaagaagaa
     1801 agtatatgca aaagagtaga tttaccacaa ccgctactcc cttgaatagc aatgcaatct
     1861 ttggtattta aagtaagatt taaaccctca aaaagcggat aatcaaaact atggcttaaa
     1921 ttttccgctc ttaagagttc catttttaac cgtttttaaa gttgtgcagc aacttcagcc
     1981 gcaaaatctt cagttttctt ttctaaacct tcgccaactt caaagcaaat aaattcaaca
     2041 attttaattt ttccaccaaa ttctttttct ttttcagcga tcacttgttc tacagttttt
     2101 ttatcatcca ttacataaaa ctgacccatt aaagtaagtt tgctatcgag ttgagaatta
     2161 tcggctataa agctattcat tttgcccggg ataatattgt cccaaatttt ttcaggttta
     2221 ccttgagctt taagttcttc tttgattttt tcttcagctt cttttaaaat tgcatcactt
     2281 aattgtttgc gacttgcaaa ttgaggaatt ttatgttcag gtttatttgg atctttaagt
     2341 ctgcgtcttt cttcattttc tttttcaagt tcagcaacca aggctttgta ttcattttca
     2401 acaaaagtca tatccaaatc ttcataactt aaataacttg gtctcattgc tgcaatatgc
     2461 atacaaattt gtcttaacaa atctcttgat tttgaagcca cttcagtgct atcacaagct
     2521 gcagcgatca caacgcccac acggccattt gtatggatat aaccatttac aacgccgtta
     2581 gcacctgctt ttaaagttgc aaatcttctt acaactaggt tttctcctat agttgcaatt
     2641 tgacttttta aatattcttc aaattttaca ccattaatcg tacttgagtg aagttcttct
     2701 acactttgca agctattgct ttgaatatga gctgtagtat cttttgttaa agcgataaac
     2761 tgatcatttt ttgccacaaa atctgtttcg gaattaatct cacttacagt tgcgcttgta
     2821 aaatcatcac ttacttttac acttactaaa ccttctgcag caagtctatc tgctttttta
     2881 gcagccttac ctaaaccttt ttctcttaaa agttgtactg ctttatcaaa atctccatta
     2941 gtttcactca aagcattttt acaatccatc atccccgcgc ctgtactttc gcggagttct
     3001 tttaccattg cagcagtaat ttcagccatt attcttgctc ctcaccgaag tcttcttcgc
     3061 tcatcgcttc atctaaaact tcttttttct cttcatcggt gatttctttt tcttcatttg
     3121 ctaaagcttc gccatcttgt tctcttaaag cttttccttc attaatcgct tcagccattt
     3181 cttggcagaa aagttgcact gaacgaattg catcatcatt tcctggaata ggataagtta
     3241 ccaagtcagg atcacagttt gtatctagtg gagctacaac aggaattctt aatctatttg
     3301 cttcttgaac agcaattttt tcttttactg tgtcaataac aaaaatcata tcaggttgag
     3361 ttttcatata acgaattcca cctaaataag ctaataattt ttcttttttt cttgtaagca
     3421 ttaaagcttc ttttttagtt aaaagtttaa tacttccatc ttcttccatt ttttcaatta
     3481 cttctaattt tctaattgat tggcgaatgg taccaaaatt tgtcatcata ccgccaagcc
     3541 atctatgatt tacataaggc ataccgcatt tttcagcgta ttctttaatc gctccacctg
     3601 cttgtttttt tgtcccgaca aaaagtatag tttttccttc ggcagcagcg tcacgaacga
     3661 tattataggt atatctaaaa tatcttaaag ttttttgtaa atcaattaca taaatacctt
     3721 ttctctcgcc aaaaatgaat tttttcatct ttggattcca gcgtcttgtt tggtgtccaa
     3781 aatgcacacc gcattctaat aaatctctca tactaaccat gagtttctcc ttgtaaattt
     3841 agctttattc ctccacatcc cttaatttac acaagctaaa aaggattgat gcgtgtgaaa
     3901 tgaagctaat attttatcaa atttaagttt agtttttact tatatatgta gtccttggta
     3961 aggcttagat tattattgat ttcttttgtg attaaaaatt gaaacaaatc cacgcttcca
     4021 acacgaaaag cagaggcaca agaacgaagg tataaatccc acattcttat aaattcttca
     4081 tcatattttt cccttacctt gtccaatact ttgttaaaat tttcatccca taaatctaaa
     4141 gtttttgcat agtgcattct taaactttct gctaaaagaa gatgaaaatc ccactcactc
     4201 atagcactta caacctctct taaagaaggt aaatatcctc ctggaaaaat atatttatct
     4261 atccaagcat ttgtttttcc ttcaaacatg gctaaaatag aatgtaaaag catagaacct
     4321 ccaggtttta acacttgttt tactttcatg aaataaagtc ctaaattctc tttgcctaca
     4381 tgttcaaaca tacccacaga aacaacttta tcaaaataat tttcaaattc taaatcttga
     4441 taattttgaa gtcttatttc tattttatct tcaagaccaa gttcttttac tctttcctta
     4501 gcttttttac actgctcctc tgaaatagta attccaacaa ccttaactcc atacttttga
     4561 gccgccataa tagaaagcca accccagcca caacctatat ctaaaagctt ttctccttct
     4621 tttaaatcaa gttttttaag agtatgttct attttgttaa tttgagcttc ataaagagta
     4681 ttattaggct ctttaaaata agcgcaagaa tagctcatag tatcatcaag ccaaagctta
     4741 taaaaatcat tacctatatc ataatgactt ttgatatttt tactttcctg tttttgggct
     4801 attttactca agatatcctc tgtatttttt aaaaaacgct tatttgaaaa ataatacaaa
     4861 actttagcta tttcatcata atcaccttct atttctagtt tagactccat ataatgtttt
     4921 gcaaaaacta aactcgtatc actaaataat tttaaaaaag gtattttttc tttgaaaatt
     4981 aaagaaaatt tagcaggctg attacccaca tgaaattctt cttgatccca aaatacaatt
     5041 ctaaaatttc cataattcca ttttgaaaga ataaatttaa tcatttgttt ttcaagcatg
     5101 acatactcca actaataaaa attattattt gatagtatct cttaattatg tttaaaattt
     5161 gataaaattg aagaaaagat agaatttttg ccacagatat aaaatagtgg caaaaatttt
     5221 ataatactaa tgtaatttag accaaacaga acgcttccaa cctatagcaa aaatacttaa
     5281 aattacaaag aatatcatta cataaattcc tgtagttttt ctttcttctt ttttgctatc
     5341 acccacttga tcaatataag atacaacctt agcctgtgca gcttctgtta aacctactct
     5401 tggcatagcg gttcctggaa gaagtttttg agtattatta ataaaatcat gtaaatattg
     5461 ctcaccacga gatcttatca tcatagaaag atcaggtgga acagaaccta aataagtttt
     5521 taaatcattt tgatttgatg gagtaaaaaa gctatcgtat ttcatatcat gacaacgtcc
     5581 gcaagcctca ataaaagttg ctttatcttt agcaaatttt atatcttttt ccattaaagc
     5641 tgctttttga gcactatttt ccattttagc atattttgcc tcaacatctt tcttaatagt
     5701 agcatcttca ttggcttcaa atttaacact cacatcttta agataagcaa ttacattggc
     5761 tatatttgca tttgtagctt cttcactttc tcctgaagta tctttattgt aagctgtcat
     5821 aataaaagca tcaccaaatt tatgatctac ttttaaagca agcgcaggat gcataatcaa
     5881 agctgctaaa aatttttcat caaaaatagc accagctgca ctgagatcag gcggtattac
     5941 tcccatagaa gaatcagtaa tattagccgc tattccatct tcttttacac catgacatgc
     6001 aaaacagtta ttttcaaaaa attctttacc tttttttgca tcacccttag caaaatcgat
     6061 ctttgcaaca tctgcccaaa gtgtttcaac cttgcttaat tcttcttttg ctttttcaag
     6121 ttctttgttt gcactctcta ttcttttagc atctcctgaa gcttgtgcat cttttagagc
     6181 taattcttta gcttcaacta taccttttgc aaaagtagta tcttcaacag caaaatcaaa
     6241 atttgcagga gcaacatgag gcttcatcac tgaatgagca taaggctcta ccccccaata
     6301 tacaagtgca gtaaaaacta ctacaactaa aaatattttt atttctctca ttgtttagct
     6361 ccttttctct ccataatagt aataaccggt aaaactacaa taagtaaaag taaaaatact
     6421 atagaagcgt aaaatcctac ccaagcattt acacctgttg gaggtaattt tccataaact
     6481 gttaaaacaa ttaaatcgat aagcaatatc caaaaccaaa tgaaaaataa aggtctttca
     6541 tgagctggtt ttaccacatc acttctatca agccaaggaa gcaagaagaa aatcacttga
     6601 gcaataccaa atgcagccaa acctatatca aaagctttaa tacctgcaat atcaaagaaa
     6661 aatcctctta aaacttcata actccataag aaataccact caggataaat atgagctggt
     6721 gttttaagcg cattagctgg atcaaaatta attggatcca ttgcaaattc aaatttaaaa
     6781 cagaccaaat aaaagaagaa aatcataaaa aagcttatat acataaaatc ttttgataaa
     6841 aatcctggcc aaaaaggaat cactttagaa ccctttgtgt cacctgccat gtatttttca
     6901 gcctctaaat caaagtcaag ttcttcagaa atttcattat taacatgagg aattcttaaa
     6961 gaatagaagt gaaatgctat aatagcaatg ataactatag gaagcaagca cacatgaagc
     7021 ataaaaaatc ttgttaaagt tggatcagaa accgcataat ctccacgaat ccaaatcaca
     7081 agctcagggc caataaatgg tatccctcca aaaagattag tgattacttg agctgcccaa
     7141 taactcattt gtccccaagg aagcatatac ccactaaaag cttcagcaga aaatacaaca
     7201 aacaaaagca taccgctaac ccaaatcatc tcacgacctt ttttataaga accgtaataa
     7261 attcctgtta gcatatgtat gtatataatc aaaaatacaa cagaagcggc aacaccatgc
     7321 atgtgacgcc aaagccatcc atagtccacc tcttgcataa tagtcttatt cacactatca
     7381 aaagcaagtg cagtatctgg tttataatac atcacaagta aaagtcctgt aacaaaaagc
     7441 actgcaaaaa gagtggttaa aataaccccc attgcccaaa gaaagttaat ttgctttggt
     7501 atccaatact ttaccattaa aacatcaagc agtttatgta ccgcaagtct ttgatcaagc
     7561 caatctacaa gaccattagc ttttctaatt tgtgccatct taagcctccg ctatcatttt
     7621 tttatattca ggaccctctt cacctaaaac aagcttggtt ccatcaattt taaaaggagg
     7681 aatttcaaga ggctttggag gaggtccaaa gacatttttt ccacttgtgt caaattctcc
     7741 accatgacag gcgcatttaa acaattgctc acttggttgg taagcaggta tacaacccaa
     7801 atgcgtacaa agtcctataa ccacagtata agctgcgtta tctaccacaa catcacgttt
     7861 ttcatctttt ggcatactcg catctttttt taatataaaa ataggctttt tacgccattc
     7921 tatagttcta agctctccat cttgcattcc tgataaatct actgtagtaa aacctgcagc
     7981 tttaacactt ggaagcggat cccaagtttt tttcatcgca acaagtgaga aaacaccgcc
     8041 tacagcagct acgcttccaa atgcaaagcc cataaagctt cgtctactct cagatgtagc
     8101 cataacttgc tcctttcgat tttatttttt aaccaagtta aaagtttatc gaaattaaaa
     8161 taaatttttt ctttgtttaa caagttttga tatttagaca ataagagcaa aaagagaaaa
     8221 aacaagcaca ggtaaagtta tcaaaaagcc aaatttacaa tattgccaaa aagaaatatt
     8281 aatgcctttt ctagccaaaa ctccaagcca aagcaaagtt gctaaagaac ctattggcgt
     8341 aagttttgga cctatattta cacctaaaag atgtgcataa atcatcaaag aatcaaaaga
     8401 aaaattctca aaatattctt ttaatgccaa atctccgatt aaaaccatag gcaaattatt
     8461 aaacacagaa gatccaaaag ctgaaatcaa agccacacca aaaattccac tcttatcttg
     8521 catcaaaaaa gcatagcttt taaccaaaat ttcactcaca cctattttat gtaaagcaaa
     8581 aaccaccata taaagcccaa aactaaaaag caaaactcca taaggtgctt caaaaagaat
     8641 tttaatactt tttttacctt gaatttttaa aataataagc caaaaaattc ccgcccaaag
     8701 caaagcaaaa aaacttattt taatattaaa aatttcacct ataaaaaaac tgataacaaa
     8761 aagaaataaa aatactatgc aaagaaaaaa caatttcaat gaaatttgct cttttttgat
     8821 taatttaaat tcaagccttt taggtaaaac tctcacataa agcacaaaaa ccgtaactat
     8881 agtagaaagc aaaacaaaaa aatttggcaa aaacatattt ttagcaaatt ctaaaaattc
     8941 tatcttaaaa taatttgctg tgatgatatt ggttaaattt gaaataacca aagcgtttga
     9001 acttgcatca cataaaaaag aaaggctaag taaaaaagaa cttaaaataa aagcatgatt
     9061 tttacaatct ttaagagttg aaaataaagc tataataata ggtgtaatga ttaaaatcgc
     9121 tccatcgtta gcaaaaaatg cagaaagaaa aaatacaaaa atcaacaaaa ataacatcat
     9181 tttttttgta ctgatataaa ttttttcttg atttttctct ctagaaaaat acaaaatttt
     9241 actcgcaata aaatcaaaaa atcccaaagc ttccaagcta aaagaaagga taatcaaccc
     9301 aaccaaagtt aaagaactat cccaaaccaa agaaaaaaca aaacaagcat ctttaaaatc
     9361 taccaattga aaaataaaaa caaaaaaagc ccccaagcta gaaaataccc aaataggtaa
     9421 attccatgga cgccaaaaaa gtaaaactaa agtagataaa aaaataaaaa aagcaagcat
     9481 ttaagctttt ttcttttgca ttttgatata aatttgcaaa atatccaacg ctgcaggagt
     9541 gattccactg atttgacttg cagcaaaaat ggttggaggt ttataatgat taagcttttc
     9601 tacaacctca ttactcaaac cacttacact tttaaaatca aaattttcag gaattttaag
     9661 ctcactaaga tttttcattt tttctacttg agctttttgc atactaatgt aatgataata
     9721 ctttgcctca tttaaaatct ctcttaagga gtaatgatcc atggtttcaa atatagggtc
     9781 aagttttttt aatttttcta tatcaaaact tgctcttgca acaatttttt gaagattgac
     9841 tatagaagaa attttatctt ctcctaaact ctctaaaaaa gcattatttt ggttgttagg
     9901 cgtaaattct ttagaaagta aaaattcaag tcctttttga agattgtttg cgatattttg
     9961 tatataagta aaatcttgct cgcttaaaag ccctaaatca tagccatatt ttccaagtct
    10021 aagtatagca ttttcttccc ttaaaagcag tctaaattcc gctcttgaag taaacattct
    10081 ataaggttct tttgtgcctt ttactaccaa atcatcgatt aaaactccta tataagcttc
    10141 atcacgcctt aaaatcaaag gctctttcat atctatgctt aagcttgcat tgattcccgc
    10201 cataaagcct tgtgctgcag cctcttcata acctgtagtt ccattaatct gtcctgcaca
    10261 ataaagattt ttaatctttt taagttctaa agtatgctta agttcagttg gctctatata
    10321 gtcatattct atagcataac caaaacgggt tattttagca ttttcaaaac cctctacaga
    10381 acgcaacatt tgagtttgta cttcataagg taaagaagta gaaaaaccgt taatataata
    10441 ctccgtcgca tcgatagttt gaggctctat aaaaagatga tggctttctt tgtcgctaaa
    10501 acgattgatc ttatcttcta tagaaggaca ataccttggc cccacacctt caatctgtcc
    10561 tgtaaaaagc ggagcacgat aaaaattatt cttaataatc tcatgtgtag ttgtattagt
    10621 gcgtgcgata taacaaggaa gttgagtagg attgaaattt cttgaacgaa aactaaaagc
    10681 tttaggattt acatcaccat cttgaatttc aagcacgcta aaatcaatgc tttttgcatc
    10741 cactcttggg caagttcctg tttttaaacg tcccattttt aaacccaaag tttgcagata
    10801 atttcctaaa tttaccgaag caagctcccc tacccttcct gcttgaagtt tattttcacc
    10861 tacgtgaata agtccattta aaaaagttcc tgttgttagg atgacttttt tggcaaaata
    10921 tgtgttttct aaatttgttt tcacgccttt aacttcatca ttttctacga ttaaaacact
    10981 cgcttgttct tgagaaattt ctaaatttgg aagttttaaa agtttattac gtgcaatgat
    11041 acggtattta tccatatcaa tttgtgccct acttccttga acggctacac ccttactttc
    11101 atttaaaatg cgaaattgta tccctgcttc atcggtgatt tcacccataa gaccacccat
    11161 ggcatcaagt tcttttacca aatgcccttt agcaagtcca cctatggctg gattacaact
    11221 tgccgctcct atttgctcaa tcaatgtagt taaaagtaag gtttttttac ccattctagc
    11281 agcagcagca cttgcttcaa cacctgcatg tccaccacct ataacaatga catcaaacat
    11341 attttgcctt gaaaaatgtg aatttttaaa agaaagatta tataatattt agacttaaaa
    11401 caaactcgtt ttaagtctaa caaaaattta tttagcttct tgaagagaaa agattagctc
    11461 attataagtt ttatctgcat ctttgcagaa atttttaagc atctcaacac ccttatttaa
    11521 gccttgttgc tgttctgctc ttaaaagatc gctataaaga ctttctattg tagaaatagc
    11581 gcttttattt ggcatacgac gaacggaata atagcctatg atattattat taacatctat
    11641 tgatggggtt acatttgcaa aaacccaata gtaattgtta tctttggttt tattttttac
    11701 gtaagcaaaa atttctttgc cttctttcat ataatcccat aaatatttaa aaacagtttt
    11761 tggcatctct tcatgtctta ctatgttatg aggtttattt aaaatttcac ccatggtata
    11821 acctgcatac tttaaaaaat catcatttgc ataaactatt ttacctttta aatctgtttt
    11881 agaagtaatt aaactatctt cttgtaaaaa aatttctctt gacattttcc caccctctta
    11941 atttatattt ttaattttgc taagatttca gcacttcttt gctctagtga tttaatatca
    12001 tttacaatcg catcataagc tttttgatcg atataatctt gacttgattc ttctattgct
    12061 tttttagcgt tatcttttat aaattcttta gctaaattta actcagtttc agaactaagc
    12121 tcattaataa caccttgagc tctctcatct tgacaaagat tagaaattgg atctacactt
    12181 tcaagattga aattttgagc cccatttaaa tttaaatata tatttgattt ataaagaata
    12241 tgatcgattt taaccacaga caaaatcaat ctctttgcaa aggatccaaa attaacacca
    12301 agagcactac tattttcttc tagacgttta aaagcttgag aaaatttatt aattctttct
    12361 tcagattcac taacaatgtt aaaaacttgc tcactgccac tttggatatt tacaaaatct
    12421 tgttgcatag tctgaattgc aatagaaatt tcgcttgtag atctttgagt tctttctgct
    12481 aactttctaa cttcatcagc cacaaccgca aagcccctac catgctctcc tgcacgcgca
    12541 gcttcaatag cagcatttaa agctagaaga ttggtttgat cggctatatc gcgtattact
    12601 tcaaccactg aagtgatatt ttgtgaatta gccacaaaag tttgtactgt ctccttgctc
    12661 gaatttacaa catccattaa agaacccata gcactttgaa gagaatccac ctctgaacca
    12721 ttttctgtag ctgtatgaga aatggcatcc actgtatcat atacattttt catcatgcta
    12781 atatcttgat ttaatgagct agaaatttga gacatgtctt tattttgatt tccaaggctt
    12841 aaatccatta aagttcttga taaagcattt ttaaaagtag atcttgctgt cacttctatg
    12901 tttgctaaag ctttatttat aaattcgata ttatgagcaa aaattccttt taaaccttca
    12961 ggcaaagcct tacgataaaa ttcacctttt tgagaacatg aaatagaagt attaatttcc
    13021 cttaagtaag cttctagccc atcaatagta ttgttaagat tatctgctat ttcggctaat
    13081 tttttgcttt ttgtttttac atagatgatt ctattgtcga aattaccctc ctttaactct
    13141 ctacaaagaa ccaaaagttt atctatcatt atttgctcat ctttgtgttg tctaagcaaa
    13201 taaatcatta aaacagcgat taaaacaaaa attatcgctc caacaaaaat atgaataaaa
    13261 atgacaccta aaacaccgat aacacttaga aaaatagtta acaataatcc attttttacc
    13321 ataaatttac ccctttttat tgaaaatttt ttgaagtcat aaatcaaaac aatgttttaa
    13381 tttctaggtg aaaattatac aataaaaaag ataaaatata tcttatttaa ttattttctt
    13441 gtaagttaaa aataagttca ttataagtca ttttataaga acttacaata tccattaaag
    13501 ctgaaactcc agcattaatg cccgattttt gctctttttc aagtaaaatt ttataaactt
    13561 cttcaattat agaaagagat tttctattag gtgcacgacg aacagaataa taattgatga
    13621 tatttccatt agtatcaaat gaagcactta catttgcaaa aacccagtaa aaattaccat
    13681 ctttggcttt atttttcaca aatgcaaaaa tttcatctcc tttttgaata taatcccaaa
    13741 gacatttaaa tacagtgcgt ggcatatctt catgtcttac tatattatga gatttataca
    13801 aaagttcatc aactttataa cctgcgtatt ttaaaaagtc attattggca taaatgatat
    13861 tccccttaag atctgtttta gaagtaatta aagcattttc agacaaaact atttctttca
    13921 taatttaaaa catcccaata aaacaaataa atcaaaaata gaattattac caataacaaa
    13981 caacaaaaag caaactgaat tgcaaaatta taaaattttc aaaaatattt taaattttat
    14041 aatgcaaata atgagaaatt ttgtaacatt tatataaaaa attatcatat catataaaag
    14101 taaagtattt ctagatttgt ttttttgtta aaatttacaa tacgcattgt taaaattata
    14161 ttttacaaag atcaaaagga gtgaataaac ttggaaactt taagtcaaac tttagctgaa
    14221 agaaaaccgc ctttatataa acgtattatc aaaagtcttg gattttgggt gattataggc
    14281 attattgcag gtattgtact tggctatata gataaagaat tagccattgc tagcaaacca
    14341 ggagttgatt attttatagg tgctttaaag gttcttatag gtcctattat ttttgttact
    14401 ttggttttag gcatcattag tcttgaaagt ttaaaaaaag taggtagtat tggtgctaaa
    14461 gcggttattt actttgaagt tgtaagtact ttagcacttg ctataggtat ttttatggca
    14521 aatgttatgc aaccaggtca tggaatgaat cttaatccaa gtcaacttga tacaaaaagc
    14581 gttcaaaaat acatttctca aaccacagaa gtaagtgcga gctctgagat tatgcatatt
    14641 ttaaaagatg ctatgcctac tgatattatc acgcctttta cagaaggaaa aaccatacaa
    14701 gttttagtta ttgctataat tactgctttg attatttctt taatgagaac agaagataaa
    14761 caggcaattc aaagagtttt tgaagtagta caaaattttg tttttaaaat tctacaaatc
    14821 attatgtatt ttagtcctat tgccgccttt tcagcaatgg ctgtactcat agctcaatac
    14881 ggaattggct ctttgatcaa cttagcatat ttacttttag taatgctgat ttcatgtctt
    14941 gtttttatat ttggaatctt aggtctgatt tgttattttg caaaagtaaa tatcttcaaa
    15001 ttatgagatt tatctcaaga gaagtattga tcgtttttgc aactagctca agcgagtctg
    15061 cacttgctcc tttaatgaga aaactagaaa aagcaggact ttctaaagca acagtcggac
    15121 ttgttttacc aacgggatat agttttaatc ttgattgtac aaatatttat ctagctatga
    15181 gcttaatctt tctagcacaa gctttcaatg taaatttaag tttagcacac gaaatcagta
    15241 ttttaatagt attaatgata gcttcaaaag gtgcagtggg tgtaactggt tcaggtttta
    15301 tagtgcttgg aagtacgctt gcagctctag gaaatatgga aatttcagaa gcaaatgcaa
    15361 ccttagcaca agttctacca gtagctgcta taggtgttct tttaggtgtt gacaaattta
    15421 tgtctgaaat gagggcggtt ggaaatcttt gtggaaattc agtagcagcc ttaatcgttg
    15481 ccatctggga taaacaaatt gattgggaaa aattccgcta cgctatggac aatccagaaa
    15541 aatttcataa tgctggaatg aactaatgag ttctttggag gaaatcatat cgattaacct
    15601 cctctaaagt attatctttt ttcctaaatt gttttaaaaa actttcattg aaattaaaac
    15661 taaatccaac ttgaacaacg gtatcatcaa tagtctctct tgcactataa tcacgacgca
    15721 ataaatttaa actaaataca ctataaggag agtaagatac ttgataatta gttttatcat
    15781 tatccttact tatatcaaaa gcaaaagcgg tataagttgg aattacaaaa ctcattccaa
    15841 gctgtaaatt tttttctgct tcattgggta tataataatt actataagcc tttataaatt
    15901 tactataacc aaactctgta ccaaagcttt tagtatcttt ttgttctttt tgtttatcaa
    15961 taaaaccatt aactccaaat aaaaaatcat ctttttcata acgattgatt aaaccccatg
    16021 agtaattata attatcttga gccacaaaaa gttctttttg aaaaagcaaa gaattattct
    16081 ccccctcata aagagaactt aaatttttaa cctgcgcgtt ttcgttttga aaatccaaat
    16141 tcccatctgt tttatctata ccattattat tttctaaagt ttttgaaagt aagctatcaa
    16201 aagtgctttt aaaatccaca ttctcttctt gaatttttgg agcttctttg gtattttcat
    16261 aatcaaagtg ctcccaagaa ttttgattat tattttttgc taaagcctct gtaagttcat
    16321 cggcattgag taaagaaaac aatgctatta tataaaaaat acccctcatt attcttatat
    16381 tccttattat ttcttgtttg agtatttatt ataaaaaaat aatataaata aaaattccac
    16441 aaagactaaa aaataaaatt agcaaattta aagtaaataa gtgtataatt aaaataaaaa
    16501 agggttatta atgcaaaaag acaacctcat agcttttgtt atttttatta tcagtactat
    16561 cgcatttgtt atttggggat ttggttatat ttcgcaacat caattgattc tttttattct
    16621 tgcttctata tttggcattt ttatggcatt taatataggt ggaaatgatg tagccaattc
    16681 ttttggaaca agcgttggcg caaaaacagt aaccattaaa caagctttaa ttatagcagc
    16741 tgtttttgag ctaagcgggg caatcttcgc aggcgcagaa gttactaaaa ccatacgcag
    16801 cggtattgtt atttttccaa attctttaga tcctatgctt tttgttatca ttatgcttgc
    16861 tgcactttta agctctgggg tttggatttt tattgcaacc aagaaaggct tacctgtatc
    16921 aaccacacac agtatagttg gtggaattgt aggtgctagc attatgatgg ggcttttaaa
    16981 atttgatggg atccaaacac tctctatgat taaatggagt gaaattttaa gaatagctat
    17041 ttcttggata gcttctcctc ttttaggggg tattgtagct tatattattt attcatatat
    17101 tgataagaaa attttaaaac catcagaaaa actaaatgat gatttgaaaa atatcaaaaa
    17161 agaaagaaaa aaattcaaag aagaatactt tttaaattta aaaacaaaat cccaagaaga
    17221 acaaatcaaa gaactttccg ctatagcttt agatgaggaa gaacaagaaa ataatttcta
    17281 tagaaataaa atgaaggaat ttaaggatca agaaaaagat atagatattt actctatttt
    17341 aaaaactcat atgccaatca ttgcttgtat tgctgctgct atcatttcgg caatgttttt
    17401 atttaaaggt ttaaataatg ttagcacttt agatatttta caaaactttt ggattatcgg
    17461 aattatagga actataagtt atgttgtaac atttgctata gtcaaaatcg ttaaaaaaac
    17521 agaacttaat aaaactactg atagaatttt ctcatggttt caaatattta cagcctctag
    17581 ttttgcattt tcacacggag ccaatgatat agccaatgct ataggtcctt ttgcagcgat
    17641 tttagatgtc ttaaaaaacg gtacaattaa cgcgacttct cctgtacctt ttgctgcttt
    17701 agctatgttt ggagttgctc tagttgtagg actttggttt ttaggtaaag aagtgattac
    17761 tacagtgggt tcaaaacttg caaccatacg ccctactact ggattttctg cagaacttgg
    17821 tgcaagcata gttatactct tagctacaca atttggaatt cctgttagct ccacccatat
    17881 actcataggt gctatattgg gtataggagt gtataataaa aacgcaaatt ggattatgat
    17941 gaagcctata ggattggctt ggattatcac tttaccagcc gctggtatta tggcagcact
    18001 tgtattttta ggatttaaac tatctttagg aatttaagta aagcttattt ttctaaaata
    18061 ttttttcctt taattatatg cattttaatc tttccaaaaa gtttatcctc agaataaaga
    18121 gaactttttg gagcaaaaat ttcttcattc tcatcaaaaa gaactaaatt agcttctttg
    18181 ccaacttcta taactccact atttaaacct aaaaattcac taggattttt acttgtaaat
    18241 cgacaaagct cttgccaatt taaaaatcct tctttgatta aaaaagtata acaaagactt
    18301 ataaattcgc atacgctatg aattccaaaa gccgcttcat caaaagctaa atcttttaaa
    18361 gaaattgatt ttgcactatg cagggaagtt aaaaagctaa tctttccttc ttttaaagcc
    18421 tctcttaaag ccaaaacatc ttctttgctt cttaaaggtg gcataagttt cgcagccgta
    18481 ttaaaatctt cacaagcact atcatctttg ataagatgat gaatgcttac aagttttaaa
    18541 tccttttcat ctaataatac taaagaatct ttcaaactta aaagatcaaa aataacttta
    18601 tttttataaa atttagccaa ttctttcatt ttagctatct ggctagtttc agcgatttta
    18661 ctcatgccta taagccctag ctcaaaactc atttcacaat cattcatcac tccattatca
    18721 tcaaaatcct tatcataaca acgcacaaaa attggagagt ctttcataaa agcatattgt
    18781 gaacttactt ttaaagtatt tgcatctaaa gagctgtcaa gctctaaagc acaagcacct
    18841 ttatttaaaa gagtggctaa atttttaagc ttgccgtttg tatccttaac ccgcacactt
    18901 gaaaaaattt gcatctttct ttgagctaaa ttttgtaaaa ataaagcaaa actttcttca
    18961 tcaaaatcca tgcaatcacg caaaactata ctagaaattc ctccttttag acactcattt
    19021 tctaaaagct ctaaattagc taaagaaaat ttatcgtttt ttaaactcac acacaaatcc
    19081 acaaaagatg gaagtaaagt cataccttta gcatctaaaa tttcttcgcc ttgtaaatta
    19141 gaatcaatat tggtaatttt tccttcttta atctctatat cttgtaaaga atctccataa
    19201 atttttgcat ttttaattat catgattttt ccttaatcat tttgctttaa taaattctgc
    19261 gttgcttctt gcacgctttt acccttaaaa attgccacta cttcatttac aataggtgta
    19321 taaattcctt tcatttttgc tagtttttct atagcataag cagtttttac accttctgct
    19381 acttcattaa gttcggctaa aatactatct aatttttgat tttgcgccag ttttaaaccc
    19441 actctataat ttcttgataa aacactcgtt gcagttaaaa acaaatcccc tgccccactc
    19501 aatcctaaaa aagtttcttc tttagtgcca aaaaatttac caaaacgatg catttctata
    19561 agtcctcttg aaatcagtgc tgctcttgca ttattaccaa gttttaaccc atcactaatc
    19621 ccacttgcaa ttgctaaaac attcttataa gcaccacaaa tttcagcacc acgaacatca
    19681 ttatcaatat aagttttaat aaaatcaggg aaaaaacttg caaatttttt acaaagctct
    19741 tgatttatcc cgctaatcat caaagcagta ggaagttttt gcatcacttc agcagcaaaa
    19801 gaaggaccgc ttaaaacaca aaaattttct tttggtacaa aatctaaaaa aatttcatct
    19861 aaaaattgac aactttgatc ttctatacct tttgaagcaa ttaaaatttt ttgccccttg
    19921 ttgatgaaat tttctttaag ccaagcacgc atcccttgag aacttaaagc aaaaacaaga
    19981 tattcacatt ctaaagcttc ttttatgcta acaaaatctt ctaaatcacg ctgatgcaaa
    20041 gaactgataa aacaattgtg attttctttt aaggctagat gtaaagcact gccccatttt
    20101 cccgcaccaa taaccgctat acgcatcaac caagctttgt ttttaaaatt tcatttactt
    20161 ttgcaggatt aaaagctcct ttgccttctt tcattgtttg acccacaaaa aatccaaaaa
    20221 gcttgtcttt accactttta tactctgcaa ccttatcggc atttgcattt aaaatttgtt
    20281 caatcaccgc ttctatggct gaatcatcac ttacttgctt aagtcctagc ttttctatag
    20341 cttcatcaat ttccacgcta gtattttcaa atacaaaagc taagacatct ttagccgctt
    20401 ttgcactgat agtgccatct tctatgcgtt taattaaaac tccaagcttt tgagcatcta
    20461 caggagaatt ttctatagtc aattctcctt ttaaaagtcc cataagttca gtatttaacc
    20521 aatttacgca aagtttagga tttaaatttt gagaaataag actttcaaaa aaacgactca
    20581 tttctaaaga actgattaaa acctctgcat cactttcttt tataccaagc ttgtctataa
    20641 agcgtacttt cttctcatca ggaagctcag ggattttaat atccaaaaac tcatctttta
    20701 ataaaacagg caataaatca ggatcaggaa aatagcgata ttctgccgct tcttctttgc
    20761 cacgcatact tcttgtaact aaatttgtcg tatcaaaaag tctagtttct tgaactactt
    20821 cttgttcgta agttccatct tcccaagcct cactttgtct ttttacctca tattctatag
    20881 ctttttggat aaaacgaaaa gaattaagat ttttaatctc tactctagta taaagttttg
    20941 tatcgccctt aggtcttata ctaacatttg catcgcatct aaaacttcct tcttgcatat
    21001 ttgcatctga aatgtctaaa aagcgtataa tagaatgaag ttttttaaga taagctactg
    21061 cctcatcgct acttctaagc tcaggctcac tgacaatctc aagcaaagga gttcctgcac
    21121 gatttaaatc tactttagaa aaattacttt catggatatt tttacctgca tcttcttcca
    21181 agtgcgctct tgtaatacct atgcgtttat tttcaccctt tacattgata aaaagctcac
    21241 ccttttctac tatagggata tcaaattgtg aaatttgata agccttaggt aaatctggat
    21301 aaaaataatt cttacgatta aaaacacttt ttttattaat tgttgcattg acagcttttc
    21361 caaaagctat agcttttttt acagcctctt catttaaaac aggcaaagct cctggtaagg
    21421 ccaaacaagt gggacaaaca ttggtatttg gagcttctcc aaaagaagtt gcacatgagc
    21481 aaaagatttt tgtttttgta tttaactgag catgaacttc aagacctata actacttcaa
    21541 acataaaatt tccttgaatt tttaaatgtt ttattttatc tttttttctt ttagaaaggc
    21601 tttaaatatt aactttaaat gctataattc ttagacaatt tatatttaag gagttaaaat
    21661 gccattatta gacagcttta aagttgacca tactaaaatg ccagctcctg ctgtgcgttt
    21721 agctaaagtt atgaaaacac ctaagggtga tgatattagc gtatttgatt tgcgtttttg
    21781 cataccaaat aaagacatta tgagcgaaaa aggtactcat accttagaac atttattcgc
    21841 aggatttatg agagatcatc ttaattcaaa ttcagttgaa attattgata tttcacctat
    21901 gggttgtcgc acgggttttt atatgagttt aattggaaca cctgatgaga aaagtattgc
    21961 aaaagcttgg gaagcagcca tgaaagatgt tttaagcgta agcgatcaaa gcaaaattcc
    22021 tgaacttaat atctaccaat gcggaacttg cgcaatgcat tctttagatg aagccaaaca
    22081 aattgcccaa aaagttttaa atctaggtat tagcataata aataacaaag aattaaaact
    22141 cgagaatgct taaaaagaat ctttattttt taaatg
//
LOCUS       DAPIYB010000022        21746 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.022, whole genome shotgun sequence.
ACCESSION   DAPIYB010000022 DAPIYB010000000
VERSION     DAPIYB010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21746
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.022"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..947
                     /locus_tag="RJ318_000639"
     CDS             <1..947
                     /locus_tag="RJ318_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7430531.1"
                     /translation="DNYKNSLYKPLIFIDEIHRLSKTQQEMLLIPMENYRLILIGAST
                     ENPYFVLSSGIRSRSMLFEFKSLGAKELETLLLRVQEKMKFSIDKEAKDFLLKSADAR
                     AMLNLLEFVLVLDEKHISLENLKKLRNTINSEGVSSKDTHYILASAMIKSLRGSDVDA
                     AIYYLARLIDAGESADFIARRLVIFSSEDVGNADPNALNLAVSTLDAVKNIGYPEARI
                     ILAQCVVYLASTIKSNASYKAINEALNYVKNNEALEIPNYLNNNHQEKQNYLYPHDFG
                     GWVEQKYLGKNLKFYHSKGLGEEAKLLDNLYKLKNHKA"
     gene            1010..1738
                     /locus_tag="RJ318_000640"
     CDS             1010..1738
                     /locus_tag="RJ318_000640"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDV7430532.1"
                     /translation="MIKIGIYGAKGRMGKQIEECLKSETQARISILYDKGGNLGELFE
                     KSDVIIDFSSPSGTHELLNYARTMPKPLVIGTTGLDEKILHLMQSASEVMPIFYATNM
                     SLGVAVLNYLASKASQMLRNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEK
                     VRVSGRDGIIGERSKDEIAVMSLRGGDIVGRHTVGFYEDGEFLELNHTATSRATFAKG
                     AIKIAIWLSKQEAKMYSINDFLGI"
     gene            1740..3077
                     /locus_tag="RJ318_000641"
     CDS             1740..3077
                     /locus_tag="RJ318_000641"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDV7430533.1"
                     /translation="MCAVVGVINSKNASTYAYYALFAMQHRGQEASGISVSNGKNIKT
                     IKAKGEVSQIFNPDNLKTLEGEIAIGHNRYSTAGNSSLNDAQPIAATSVLGDIALAHN
                     GNLVNKEEVRSRLIQDGAIFQTNMDTENVVHLIARSKQESLKDRFIESLKECIGAYCF
                     VLASKDKLYVVRDPHGVRPLSLGRLKDGGYIVASETCAFDLIEAEFIRDVKPGEMLIF
                     TQGNDKFESIELFSQTPRICAFEYIYFARPDSIVEGKSVYEVRKKMGEALAKKFAYKA
                     DFVVPVPDSGVSAAIGFAQYLQIPLEMAIVRNHYVGRTFIEPTQELRNLKVKLKLNPM
                     RKVLEGKEIVVIDDSLVRGTTSKKIISLLRAAGASKIHLAIACPEIKFPDTYGIDTPT
                     FEELISANKNAEEVREYVEADTLSFLSIEELTQSIGDERKYSLISFDGDYFIK"
     gene            complement(3080..4465)
                     /gene="fliI"
                     /locus_tag="RJ318_000642"
     CDS             complement(3080..4465)
                     /gene="fliI"
                     /locus_tag="RJ318_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HDV7430534.1"
                     /translation="MNLEKLRSKLGKENLSAIFGEITKISATSIEIRGLKTGVGDIVK
                     LVSNENENLNTLAMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGR
                     VVDPFMRPKDGKGAIEATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQK
                     LGIFAGSGVGKSTLMGMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIV
                     ATSDDSALMRKYGAFCAMSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTT
                     KGYPPSVLSLLPQLMERTGKEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVL
                     SRELTDFGIYPPINIQNSASRVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQ
                     KGSDKELDEAISKKEFMQKFLGQNPEESFEFNQTLELLSQIDTPNTPLPPTQNINVGS
                     ASATLPNPNLK"
     gene            complement(4465..5037)
                     /gene="folE"
                     /locus_tag="RJ318_000643"
     CDS             complement(4465..5037)
                     /gene="folE"
                     /locus_tag="RJ318_000643"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDV7430535.1"
                     /translation="MQKKFEDCVKTMLEIIGENPNREGLIKTPNRVFKAYEFLTSGYT
                     QNVKEILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKI
                     PRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGVQKANSTTT
                     TSALRGIFLKNEKTREEFFSLINSAKQVRF"
     gene            5180..6514
                     /locus_tag="RJ318_000644"
     CDS             5180..6514
                     /locus_tag="RJ318_000644"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDV7430536.1"
                     /translation="MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGF
                     RPGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALQELKKENKELVGEPYFEKFDRKD
                     GEIIAELILSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKR
                     ALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIK
                     VTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKL
                     KEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEI
                     EELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRY
                     GMNPKEHLENYKKQGALPAVKMALIEEKLFNDIFIPKTEKSEKVSKKEKEDK"
     gene            6514..7098
                     /gene="clpP"
                     /locus_tag="RJ318_000645"
     CDS             6514..7098
                     /gene="clpP"
                     /locus_tag="RJ318_000645"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDV7430537.1"
                     /translation="MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIV
                     AQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFL
                     LSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQK
                     VAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK"
     gene            7134..7661
                     /locus_tag="RJ318_000646"
     CDS             7134..7661
                     /locus_tag="RJ318_000646"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDV7430538.1"
                     /translation="MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGV
                     GLAAIQVDIPLRVLLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDF
                     FEEVKRYNHILLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKF
                     DKEFKKKKKNHKKEK"
     gene            7658..9163
                     /locus_tag="RJ318_000647"
     CDS             7658..9163
                     /locus_tag="RJ318_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDV7430539.1"
                     /translation="MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASTAIKESVE
                     RIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGEL
                     GLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEF
                     FKEKNYENFRFSHNHPLFANPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALG
                     MHNILFEGSPGSGKSMCAKRLVYIMPPQSLSEILMQNAYMSLDSKDCEFTKIRAFRHP
                     HHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHIS
                     RVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLY
                     VAMDEISKDDKTSISSKEMSEKILQAFIFSKKRGQKEFNGKLKDEDLSRFCVLEKDAK
                     DTLDLAISRYNLSLRSLNKILKVSRSIADLEQSLNISKTHILEALSFRARN"
     gene            9165..9863
                     /locus_tag="RJ318_000648"
     CDS             9165..9863
                     /locus_tag="RJ318_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HDV7430540.1"
                     /translation="MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQ
                     KNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSD
                     YTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALIN
                     ITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREK
                     NIYFLVKKDYESYY"
     gene            9847..11217
                     /locus_tag="RJ318_000649"
     CDS             9847..11217
                     /locus_tag="RJ318_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HDV7430541.1"
                     /translation="MKAIIDNIKILEQNAINKGLDELILMENAGLNLAKLIKKEAKKI
                     RIQRKIRKVKILFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYA
                     FKFCKKEPNFKKFHIIIDCILGTGSNRCLDEKTSLIIQKVNQSKALKIACDIPTNLGF
                     YPCFKADITFCMGALKEILLEDFAKEFVGRIKIANLGIRSKKFYPNSQAFLLEKKDLK
                     TIDRKINANKGNFGHIYIVANASAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKI
                     ENNASAIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDVVITPHPKE
                     FIKLYKMCFDENLDIETLQKNRFFYARKFSQNYDCVLVLKGANPIIVQKEKLFVVNLG
                     NQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLI
                     KGLKCL"
     gene            11208..11774
                     /gene="purN"
                     /locus_tag="RJ318_000650"
     CDS             11208..11774
                     /gene="purN"
                     /locus_tag="RJ318_000650"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDV7430542.1"
                     /translation="MLVKLAVLFSGNGSNLENILEKLHKKTIGENTYEVVLCICNKKD
                     AFGVQRAKKFGLDTVIVDHKAYNTREEFDTILVQKIKESGANLTVLAGFMRILSPVFT
                     KNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDGGMIIAQKAFEKR
                     NLSFEEFEEKIHSLEHEILPLSVIEIFS"
     gene            11846..12565
                     /locus_tag="RJ318_000651"
     CDS             11846..12565
                     /locus_tag="RJ318_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDV7430543.1"
                     /translation="MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHR
                     DKGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKS
                     IKEIKEQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMII
                     AVIIAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTA
                     MAFALVVQILNILDQRKEKNG"
     gene            12558..12767
                     /locus_tag="RJ318_000652"
     CDS             12558..12767
                     /locus_tag="RJ318_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HDV7430544.1"
                     /translation="MAKDANGIELNTGDSVSVIKDLKVKGVSTTLKRGTTIKNIKLTS
                     KEGEIEARVDKFGVIVLKTEFLKKI"
     gene            12777..13961
                     /locus_tag="RJ318_000653"
     CDS             12777..13961
                     /locus_tag="RJ318_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HDV7430545.1"
                     /translation="MRILLVLRGNYYAGQEEFIKNNKLQNYTLDLNALRLLSGSVKNI
                     VSEYKILNVKNDEDLSKILLKLLEMRMQKGEFSIINAYNETLKIYKDLAKQYRYKIYV
                     IVFDSSLKQCQEKNLLEAKKNGYIIPYALLEKTQDLLKKNPKKYPILDSRDWKKCLYQ
                     MPNLSKYKKIHHIGDLQGCYSVLKEYIKTIKEDEFYIFLGDYINRGIENGKVIKFLLK
                     ICEKENVCLLEGNHERHLIKWANGELSNSKEFNENTLKDFRKEKLTPRDARKLYPHLK
                     ECLYYKFQNKFIFCSHGGVNFIPSKPEKISFIPSHDFIYGVGGYEDSQKVANQFCNFT
                     SDNLYQIFGHRNKEKLPMKIAKRVFLCEGKIDDGGYLRVVTLDEKGFECIEIKNQIYK
                     KK"
     gene            complement(13974..15332)
                     /locus_tag="RJ318_000654"
     CDS             complement(13974..15332)
                     /locus_tag="RJ318_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDV7430546.1"
                     /translation="MDPSQVLDLNQTSTASFDAGYSILMVVVALALVFLNGFFVLSEF
                     SIVKVRRSKLEEMVKEKKAGAKKALEVTSRLDTYLSACQLGITLSSLALGWIGEPAIA
                     KMLEIPLINLGFSTVIIHTMAFIIAFSIITLLHVVLGELVPKSIAIAVADKAVLFIAR
                     PLHWFWMLFLPCIKIFDFLAAISLKLFGIKPAKESELTHSEEEIKIIASESQKGGVLD
                     EFETEIIRNAVDFSDTVAKEIMTPRKDMICLNKQKSYEENMQIICEHKHTRFPYIDGS
                     KDTILGMIHIRDIIQNELNHKSQNLDTFVKPLILVPENISISKVLVMMNKERSHTALV
                     VDEYGGTAGILTMEDIMEEIIGEIKSEHEEDSYKKLAENIYEFQGRCDIETVEEMLVI
                     NYDEDLEQVTIGGYVFNLLGRLPMVGDRIEDELCYYEVKKMDGNSIERVKVVKKTNKD
                     EE"
     gene            complement(15431..16636)
                     /locus_tag="RJ318_000655"
     CDS             complement(15431..16636)
                     /locus_tag="RJ318_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HDV7430547.1"
                     /translation="MIMFSSFFKSKKWALWAYLGLFLLLFFLYIQTSLNVAINSWYSD
                     FYNVLQKPKIELLDSNSTQKIEENLENNATLIQEANQRAEQNFQKANFINKGALYYYQ
                     NLLEYFFNSRAMIEKPNYSASDFYALILVFLAIAIPYVLIATINIYFASVYAFKWREA
                     MTFSYLKFWKNKDDNIEGSSQRIQEDTYNFSKIVESLGLSFIKALMTLVAFIPILWSL
                     SDVVSKALFANLSENSFFYFLKNIDGLLVYIALLISLGGLVVSWFVGIKLPGLEYNNQ
                     KAEAAFRKELVYAEDNRKEYAKNETMIELFTGLKFNYKRLFLHYGYFNIWLILFEQMI
                     VIVPFLIMAPGLFAGAIGLGIVMQINNAFDQVRSSFSIFITNWTTITQLRSIYKRLKE
                     FEKNISYKS"
     gene            complement(16682..17428)
                     /locus_tag="RJ318_000656"
     CDS             complement(16682..17428)
                     /locus_tag="RJ318_000656"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDV7430548.1"
                     /translation="MKSSVIFGFVLSLILHTLVLMFFLFSFYTQEKSSGVDFKQGAEF
                     TSIMMVSEFPIGELKEVSIDQKKSNSQDKNKKQDERISFNSQDKNAVLKVQKKIEKQD
                     ENQAQKEIANASENSKFKNESLSAPLQSNKDKTQTIVSGNAKEQVKSYQALLMAHLTK
                     FKKYPQEAIMQKQEGVVRIRVSIDESGNVLSKELKKSCPYAALNDEALSLFKRASPLP
                     KPPKEMLKNGDKISFVMPIDYNIKDYLGKK"
     gene            complement(17430..17840)
                     /locus_tag="RJ318_000657"
     CDS             complement(17430..17840)
                     /locus_tag="RJ318_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HDV7430549.1"
                     /translation="MIKTEMAHKEEELSEINITPFIDIMLVLLIVFMAVTPLITSSIK
                     IELPKSSQQAEDKLKNPIILYLNTDNTLAINDDKLSLENLSSALDIKTKGNKEEIIYF
                     HIDKSVKYEDIMQVMQKLKENGYGKIALSSKKMD"
     gene            complement(17827..18588)
                     /locus_tag="RJ318_000658"
     CDS             complement(17827..18588)
                     /locus_tag="RJ318_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDV7430550.1"
                     /translation="MLKKCFYFVFLLLNLNAEANATDTNLSFDSSKIETEAPKIELSL
                     SSLYQNADEVVKGVIYILVLFSILAWAVFISKLMQFYFMKKNLDLSIQKIKELKNLNE
                     LDQTKDFAGVLSLEIQDELEKSEYKNDHIKERIELRLQNTISKQITASKNGLSLLASI
                     GASAPFIGLFGTVWGIMNAFIGIANLGNASLAVVAPGIAEALFATAFGLIAAIPAVLF
                     YNYLTRKNLKLMHHLDELANFVYILFHRSYFNDKN"
     gene            complement(18600..20867)
                     /locus_tag="RJ318_000659"
     CDS             complement(18600..20867)
                     /locus_tag="RJ318_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDV7430551.1"
                     /translation="MKKLSLFCAVGLCFASFAFSEELEFDSLEISGSKIKNDEKPFVT
                     PGATSTREGIGSDTQSIDSIVRSIPGTYTNTDQAQGTVQVNIRGMSGFGRVNTMIDGV
                     TQTFYGSASDDPARFHSQTGTSAFGAVIDTNFLIGVDVTRGTFEGVGGANALMGSANF
                     KTIGINDIVHDGNIFGFLGRFSYGSNGIGPSYMSAVAGKTELENNGYVGALFGYSAKR
                     ITQNYTVGGGGKIGSSMVDTDGDGIADTNIAPFDPDFLTQKPNSQLFKLEYVPNSFTN
                     TIFSYRRYQNELAGRKIHNDNYQLDFWHNPNEWLNVNTLIAYNQGIQTYGSKSTFAAN
                     DAIANTKAKNTATTFDISDTLEGEWHRFNLNIRFGANILLNDYKNTLNTSIQGVNSIP
                     FQPRGKQNLFTYYLDNSLNYGIFTLDTNVNLLDWNIKGHRPACDEVNFMCFPKAATDI
                     DKNGLRLNASVMLSAAIHELFTPFVSFARTNRAPNVQEMFFSNNEGNGINSFLKPEQA
                     NTWQIGFNSFKHGLLKDDDRFGFKAVYYHTKIKDYIYNEQFYLEDPSKDPPSSQFYMH
                     LNSADDTIFKGVELELSYDLGFAYAKAMYSRQDTSSTISQTSGPLLGSFSASKIMELP
                     KDYANVELGFRLNDKISFGGIAKYTGKAKRVNPNTDDWNKDPNNPYYPKPTTQDLPKI
                     PIIVDLYWNIEWFKNLTMRAEVQNLFDKNYMDALNAYNSLDNQLQYNGAGDPIYLFSN
                     SARGRTFIVSFEYKY"
     gene            complement(20864..21715)
                     /locus_tag="RJ318_000660"
     CDS             complement(20864..21715)
                     /locus_tag="RJ318_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HDV7430552.1"
                     /translation="MKFYTILSILFISFMLSACAVLQKSSPLQENKDFYILDTHTQKK
                     ISFEDMILELLKADVILLGEKHDEVKHKISQVMIFNALEGNLSSQNINFDVALEMLAS
                     TEQNHLDKAFKNKKTIKANELTNALNWDKVWKWKDYEQFVNVVFYSKSKILGANLSRS
                     EITSIYNGAQPLKGYVSTTNEVKKQLFDIISLSHKLNPEENKELLDKLVEIQQFKDRR
                     MADVLVHHVNKVLLLAGSYHTSKKIGIPLHIQDFKSSKKIVVVNLSYGEIDLKDSDYV
                     LIYKGEE"
BASE COUNT         7725 a         3256 c         3487 g         7278 t
ORIGIN      
        1 tagataatta taaaaatagt ctttataagc ctttaatttt tattgatgaa attcaccgcc
       61 ttagcaaaac ccaacaagaa atgcttttaa ttcctatgga aaattaccgt ttaattttaa
      121 ttggtgcaag cactgaaaat ccctattttg ttttaagttc tggtataaga agtcgttcca
      181 tgctttttga atttaaatct ttaggggcaa aggaacttga aactttactc ttacgcgtac
      241 aggaaaaaat gaaatttagt attgataaag aagctaaaga ttttctactt aaaagtgctg
      301 atgcaagagc tatgctaaat ttgcttgaat ttgtcttggt tttagatgaa aaacatatca
      361 gtcttgaaaa tcttaaaaaa cttcgcaaca ccataaatag tgaaggtgtt agctcaaaag
      421 atacacatta tattttagca agtgcaatga taaaaagttt acgcggaagt gacgttgatg
      481 cagctattta ttatcttgca agacttattg atgcaggaga aagtgcggat tttatcgcta
      541 ggcgtttggt gattttttca agtgaagatg tcggaaatgc cgatccaaat gctttaaatt
      601 tagcagtttc gactctagat gctgttaaaa atataggtta tcctgaagca agaattatcc
      661 tagcccaatg cgtagtttat ttagcaagca caatcaaatc caatgcaagc tacaaagcta
      721 tcaatgaagc tttaaactat gtaaaaaata atgaagcttt agaaatacct aattatctta
      781 acaacaatca tcaagaaaaa caaaactatc tttatccaca tgattttggt ggctgggtag
      841 agcaaaaata tcttggtaaa aatttaaaat tttatcatag caagggctta ggagaagaag
      901 caaaattgtt agataattta tataaattaa aaaaccataa agcttaattt tattatttaa
      961 aatttacaaa ataaatgcta aaatcaatat tttattttca aggaaaaaga tgattaaaat
     1021 aggaatttat ggcgctaaag gacgaatggg aaaacagatt gaagaatgtt taaaaagcga
     1081 aacacaagca cgaatttcga tactttatga taagggtgga aatttaggag agctttttga
     1141 aaaaagcgat gtgattattg atttttcttc cccaagtgga actcatgagc ttttaaatta
     1201 tgcaagaact atgcctaaac ctttggtaat aggtacaaca gggcttgatg agaaaatttt
     1261 acatttgatg caaagtgcta gtgaagtgat gccgattttt tatgcgacca atatgtcttt
     1321 aggtgttgcg gttttaaact atcttgctag taaagccagt caaatgctaa gaaattttga
     1381 tatagaaatt ttagaaatgc atcatcgcca taaaaaagat gccccaagtg gtacagctat
     1441 gactttagct caaagtgtag caaaagctag aaatttagaa cttgaaaaag taagagtaag
     1501 tggaagagat ggcattatag gtgaaagaag taaagatgag attgccgtga tgagtttaag
     1561 gggtggcgat atagtaggac gccatacggt aggtttttac gaagatggtg agtttttaga
     1621 acttaatcat accgctactt caagggcgac ttttgctaaa ggtgcgatta aaatcgctat
     1681 ttggcttagc aagcaagaag caaaaatgta ttcaatcaat gattttttag gaatttaaaa
     1741 tgtgtgcagt tgtaggagtt atcaattcaa aaaatgctag cacttatgcg tattatgcgc
     1801 tttttgctat gcaacaccgt gggcaagaag caagtggcat tagtgtgagt aatggtaaaa
     1861 atattaagac tattaaagct aaaggtgaag tgagtcaaat ttttaatcct gataatctaa
     1921 aaactttaga aggtgaaatc gctatagggc ataatcgcta ttctacagca ggaaattcaa
     1981 gtttaaatga cgctcagccc atagcagcta cttcggtttt aggtgatatt gctttagcgc
     2041 ataatggaaa tttagtcaat aaagaagagg taagatcaag acttattcaa gatggagcta
     2101 tttttcaaac caatatggat acagaaaatg ttgtccatct tatcgcaaga agtaagcaag
     2161 aaagtctaaa agatagattt attgagagtt taaaagaatg tataggagct tattgttttg
     2221 ttttagcaag caaagataaa ctttatgttg taagagatcc tcatggggtg cgtcctttgt
     2281 ctttagggcg tttaaaagat ggaggctata tagttgctag tgaaacttgt gcttttgatc
     2341 ttatagaggc tgaatttatt cgtgatgtta aaccagggga aatgcttatt tttactcagg
     2401 gaaatgataa atttgaaagc atagaacttt tttctcaaac tcctagaatt tgcgcttttg
     2461 aatacattta ttttgctaga cctgatagta tagtagaagg caaaagcgtg tatgaagtgc
     2521 gtaaaaaaat gggcgaagct ttagctaaaa aatttgctta taaagcagac tttgtcgtgc
     2581 ctgtgccaga tagtggagta agtgcagcta taggttttgc gcaatattta caaatccctc
     2641 ttgaaatggc aatagtaaga aatcattatg taggaagaac ttttatagag ccaactcaag
     2701 agcttagaaa tttaaaagta aaattaaaac ttaatcctat gcgtaaagtt ttagaaggca
     2761 aagaaatcgt agtcattgat gatagcttgg tgcgtggcac tacttctaaa aaaataattt
     2821 ctttgcttcg tgctgcagga gcgagcaaaa tccatcttgc catagcttgt cctgagatca
     2881 aatttcctga tacttatggc atagatactc caacttttga agaacttatc agtgcaaata
     2941 aaaatgctga agaagtgcgt gaatatgtag aagctgatac gctaagtttt ttaagcatag
     3001 aagagctaac tcaaagcata ggcgatgaaa ggaaatattc tttaatcagt tttgatggag
     3061 attattttat taaataattt tattttaaat taggattagg caaagttgca cttgcacttc
     3121 ctacatttat attttgagtt ggtggcaaag gagtatttgg tgtatcaatt tgacttaaaa
     3181 gctctaaagt ttgattaaat tcgaagcttt cttcaggatt ttgtcctaag aatttttgca
     3241 taaattcttt tttagaaata gcttcatcaa gttctttatc acttcctttc tgataagcac
     3301 cgatgcgaag caatacttca ttttctttta aaagcgagtt taaacgctta aattttcttg
     3361 cccaaagttt atgttcagga cttataatgt cactcatcac ccttgaagca gagttttgta
     3421 tattaatagg aggataaatt ccaaagtctg ttaattcacg gcttaaaaca atgtgtccat
     3481 ctaagataga acgactttga tcggcgattg gatcgctcat atcatcacca tccactaaaa
     3541 cggtaaaaaa ggctgttata gtgcctttac cttcttcttt accggttctt tccatgagtt
     3601 gaggcaaaag acttaaaaca cttggtggat aacctttggt tgtaggaggc tctccaagag
     3661 ctagtccaat ttctctttgt gccatagcaa aacgcgttac actatccatg ataaaaagta
     3721 catctttgcc ctgttcttta aagtattctg ccacactcat tgcgcaaaaa gcaccgtatt
     3781 tacgcatcaa agcactatca tcacttgtag caacaataat cactgtatca tcgagctttc
     3841 cgcctaaatt tttttgtata aattcaggaa tttcacgccc cctttctcct atgagtgcca
     3901 ctacttttat aggagctttg gaatttttaa ctatcattcc cataagagtg gattttccta
     3961 ccccacttcc tgcaaaaata ccaagttttt gtcctacacc acaagttaaa agcgcgtcta
     4021 tggttttaac acccacggga aaaacttctt ctataagccc tcttttcatt gcatcaatag
     4081 gtgcacgcat tataggcata tatttggttg cttctatagc tcctttacca tcttttggac
     4141 gcataaaagg atctactacc ctgcctaaaa gttcatcgct aacgcctatt tgcatacctg
     4201 catcacttat aaaagcacga tcgcctattt taaaaccttc tataaaagaa aatgggctta
     4261 aatagctaaa ttgttctttg atttctacaa ccatagctag agtgtttaaa ttttcatttt
     4321 cattagaaac taacttcact atatctccaa cccctgtttt aagcccacga atttctatac
     4381 ttgtagcaga aatttttgta atctctccaa aaatagcact taaattttct ttgccaagtt
     4441 tggagcgtag tttttcaaga ttcattaaaa tcttacctgt ttagcagagt ttatgagaga
     4501 aaaaaattcc tctctggttt tttcattttt taagaaaatt ccacgtaaag ctgaagttgt
     4561 agtggtggaa ttagcttttt gcactccacg catttcaaca cacatatgtc ttgcttctat
     4621 gactacaccc acaccttttg catcgacatt ttccattaaa gcttgtgcga tttgttcagt
     4681 aagttgttct tgaatttgaa gtcttcttgc aaacacttct acaaggcgtg gaattttgct
     4741 taaacctact acttttttat tagggatata ggctacatga gcacgcccaa aaaaaggcaa
     4801 aagatgatgt tcgcaaagac tgtaaaattc tatatcacgc actaaaacca tttcattatt
     4861 agaactttca aataaagcgt catttaaaat ttctttgaca ttttgcgtat aaccactagt
     4921 aagaaattca taagctttaa aaacacgatt tggcgtttta ataagccctt cacgatttgg
     4981 attttctcct ataatttcaa gcatggtttt aacacaatct tcaaattttt tttgcacatt
     5041 tttctccaaa aatatttttt atattttaat aataatgtaa tattgcaatt ttatcataaa
     5101 ttactttaaa attttatgca agtaataagg aaaaatttgc tatcattgaa ggcaaatttt
     5161 attttataag gaaaaaacta tggaagtaaa ggcaaagcaa ctagattctg ttaatgcgac
     5221 tgctagtgta aaaattcctt caggaatgat caaaagtgaa gtagaaaatt tagcaaaaaa
     5281 agcttctaaa agtgtaaaaa tggatgggtt tagaccagga aaagttcctg taagtgccgt
     5341 acttaaaaga tatgaaagag agctcactca agatgcagaa caaaatcttt ttaaatccgc
     5401 tgtaaatagc gctttacaag aacttaaaaa agaaaataaa gagcttgtag gtgagccata
     5461 ttttgaaaaa tttgatcgta aagatggaga aattattgct gaattaatac tttcttttaa
     5521 acctgaaatc aaacttgagg gttatgaaaa actcatccct gaatatcaaa ctccaaaagt
     5581 aagtaaaaaa gaaattgatg agaaaaaaga tgagctttta aagcgttttg ctactcctga
     5641 agctataaaa acaaaaagag ctttaaaaga aggtgatttt gcaaaatttg attttgaagg
     5701 ttttgtagat gataaagctt ttgaaggtgg taaagctgaa aattatgttt tagaaattgg
     5761 ttctaagcaa tttattccag gttttgaaga tggtatggtg ggaatgaaaa taggtgaaga
     5821 aaaagatatc aaagtaactt tccctaaaga atacggcgca gcgcatttag cgggtaaaga
     5881 tgcagtattt aaagtaaaac tacatgaaat tcaagagctt aaaattccag aacttgatga
     5941 tgaaatgctt aaaaaacttt taccaggaga agaaaaagct agtgttgaag ttttagatga
     6001 aaaattaaaa gagcaaatca aaaatgaaaa acttttcaaa cttgtaaatg atgaattaaa
     6061 aggcaaattt gcagatgctt tgattgaaaa atataatttt gatttaccta aaggcatagt
     6121 agaacaagaa actgatatgc agatgcgtgc ggcttttaat acttttagcg aaaaagaaat
     6181 tgaagagctt aaagcaagta aagaaaaata tcaagaaaaa cgtgattctt ttaaagaaga
     6241 agcacaaaaa agtgtaaaac ttacttttat cattgatgaa cttgcaaaat tgcgtaagat
     6301 tgaagtaaat gatcaagaat tgattcaagc gatttatttt gaagcatatc gctatggtat
     6361 gaatccaaaa gagcatttag aaaactataa aaaacaagga gctttgcctg ctgtgaaaat
     6421 ggctttaatt gaagaaaaac tttttaatga tatttttata ccaaaaacag aaaaatcaga
     6481 aaaagtgagc aaaaaagaga aagaagataa ataatgttta ttccttatgt tattgaaaaa
     6541 tctagtcgtg gtgaaagaag ttatgacatt tattcacgcc ttttaaaaga tagaattatt
     6601 atgctaagtg gtgaaattca tgatgaactt gccgcttcta tcgtagcaca acttcttttt
     6661 ttagaagctg aagatcctac aaaagatatt tatctttata tcaattctcc aggtggtgta
     6721 attacaagtg gttttagtat ttatgatact atgaactata tcaaacctga tgtttgtacg
     6781 atttgtatag gacaagctgc ttctatggga gcatttttgc ttagttgtgg cgcagaagga
     6841 aaacgttttg ctttgcctaa ttcacgtatt atgattcatc aacctttagg tggagctaga
     6901 ggtcaagcca cagatattga aattcaagcc aaagaaattt taagactcaa aactatactt
     6961 aatgatattt tggcaaaaaa tactaagcaa aaagttgcaa aaatagcaaa agatacagaa
     7021 agagattttt tcatgtcagc acaagaagct aaagaatatg ggctgattga taaggttttg
     7081 gaaaaaagtt ttaaatgatt tctttggaga tcatttaaaa caaaggtttt ttaatggtta
     7141 gaaaaattat cacctatccc aatcctagac tttttttaaa ctctgaaatt gtaaataaat
     7201 ttgatacaga acttcacacc ttgcttgatg atatgtatga aactatgata gcaagtaatg
     7261 gagtaggttt agcagctatt caagtggata ttcctttgcg tgttttactt gtaaatattt
     7321 ttgatgaaaa cgatgaacaa aaaaaagaag atttgctaga gattatcaat cctgaaatta
     7381 ttcctttaga tgaagaaatg attacttgca cagaagggtg tttgagtgtg ccagattttt
     7441 ttgaagaagt gaaacgctat aatcatatct tgcttaaata tcaagatcgc tttggagaat
     7501 ttaaagaact tgaagcaaaa ggttttttag ctgtggctat tcaacacgaa aatgatcatt
     7561 taaatggaca tttatttata gaaaaaattt cctttgctaa gcgtcaaaaa ttcgataaag
     7621 aatttaagaa aaagaagaaa aatcataaaa aagagaaatg aaaaaactaa agtgcataag
     7681 ctttcatgaa ggcttagaca ttatagaggt agaatccact tttacaagag gtttgccaaa
     7741 tttaagcata gtagggcttg caagtacagc gattaaggaa agtgtcgaac gcatcaaagc
     7801 cacactttta agttgtgatt ttgcttttcc tgctaaaaaa atcactatca atcttagtcc
     7861 ttcaggcatc ccaaaaaagg gatcgcattt tgatttggct atcgctttat taatcctttt
     7921 gcaaaatgaa gaattagatg acttttttgt agtaggagaa ttaggacttg atggaagtat
     7981 taaaagcaca aatgagcttt tttctttgct tttgtttctc tctgctaaaa ttaaaaaagc
     8041 taagatcgtt gttccaaaaa gtatagcaca aaaagcttcc atgataccaa atttagaggt
     8101 ttatggactt gaaaatttaa atgaagcaat agagtttttt aaagaaaaaa attatgaaaa
     8161 ttttcgcttt tctcacaatc atcctttatt tgcaaaccct ttacaaatag aaaatgaaat
     8221 ttttttacaa aatatggatt ttaaacttga ttttaaagat atcaaagggc aggaaaaagc
     8281 caaaagagct tgtatgatag ctgctttagg tatgcataat atcttatttg aaggaagtcc
     8341 aggaagtggt aaaagcatgt gtgctaaacg ccttgtttat atcatgcccc ctcaaagttt
     8401 aagtgaaatt ttaatgcaaa atgcttatat gtctttagat tcaaaagatt gtgaatttac
     8461 taaaattcgt gcttttcgtc atcctcatca tacttctaca agagcaagta tttttggcgg
     8521 aggaacaaaa aatgccagaa ttggagaagt agcacttgca aatggtggag tattgttttt
     8581 tgatgaattt ccacatttta acaagcaaat catagagagt ttaagagaac ctttagagga
     8641 tcataaaatt catatttcaa gagtaaattc taaaatcact tatgaaacaa aatttagctt
     8701 tatagctgcc caaaatcctt gtccttgtgg aaatttattc tccaaaaatc tttcttgtgt
     8761 ttgtagtgaa aatgagatta aaaaatacaa aaatcacatt tcagctccta ttatggatag
     8821 gattgatctt tatgtagcta tggatgagat cagcaaggat gataaaacga gtataagttc
     8881 taaagaaatg agtgaaaaaa ttttacaagc ttttattttt agtaaaaaac gggggcaaaa
     8941 agaatttaat gggaaattaa aagatgaaga tttaagtcgt ttttgtgtat tggaaaaaga
     9001 tgccaaagat acgctagatt tagcaatttc acgttataat ctttctttgc gatcgcttaa
     9061 taaaatttta aaagtttcaa gaagtatagc ggatttagaa caaagtctta atattagcaa
     9121 aacccatatt ttagaagctt taagctttag agcaaggaat taaaatggaa aataaaagta
     9181 tagctatctt tatagatgca gaaaatatcc ctgcaaaata cgctaaaagt atttttgata
     9241 tcgcttcaga ttacggagag gttatcatta aacgcattta tggggattgg actcaaaaaa
     9301 atatacaagg ttggagagag caaattgctg aatattcttt aatcgctatg caacaattta
     9361 attttgcagc caacaaaaac tcaagcgata tgtatttaat cactgaaatt atgtccatat
     9421 tttatgaaaa aaatatagat atttttgtta ttgtttcaag cgatagtgat tatacttcac
     9481 tcattcaaaa attaagagaa aataaaaaac aagttatagg aatggggctt gaaaagtcta
     9541 taaaatctta tgtaaatgcc tttagtgaat ttttttattt agataaagat gagagtaaaa
     9601 aagaagatat tttaagtaag gattatttaa gagctttaat caatatcacc gaacaactta
     9661 tcgatgaaaa agggcgtgcc gaatacgcac aaatccgtac taatatgaac cgcaaatact
     9721 cggattttca tccgcaaaat tatggtttta agaattttcg tgctttgatc cagaaatttt
     9781 tacccaaaat gaaaaaattt gaagaagaaa gagaaaaaaa tatatatttt ttggtgaaaa
     9841 aagattatga aagctattat tgataatata aaaattttag aacaaaatgc tataaataaa
     9901 ggcttagatg agcttatttt aatggaaaat gcgggattaa atttagccaa gctaattaaa
     9961 aaagaagcta aaaaaattcg cattcaacgc aagattagaa aagtaaaaat acttttttta
    10021 ttaggcgggg gtaacaacgc ttcagatggc ttggtggctt taagaaattt aaaacacgct
    10081 aaagcttata aaataggctt taaagaaaat acgcttttta aaaaacaaga gcaaatttta
    10141 caaaattatg cttttaaatt ttgtaaaaaa gaacccaatt ttaaaaaatt tcatattatc
    10201 attgattgta ttttaggtac aggttcaaat cgttgtttag atgaaaaaac aagtttaatt
    10261 attcaaaaag ttaatcaaag taaggcttta aaaatagctt gtgatatacc tacaaatttg
    10321 ggattttatc cttgttttaa agctgatatt acattttgta tgggagcttt aaaggaaatt
    10381 ttacttgaag attttgctaa ggaatttgta ggaaggatta aaatagccaa tttaggcatt
    10441 agatctaaga aattttaccc taattctcaa gcttttttgc ttgaaaaaaa agatttaaaa
    10501 actatagata gaaaaatcaa cgccaataaa ggaaattttg gccatattta tatagttgcc
    10561 aatgcaagtg ctggaacttt agcaggactt ggagccttaa attttggagc aggtcttgtt
    10621 tctttagtag cacaaaaaag tttctcgcct cttttgatgt taaaagaaaa aattgaaaat
    10681 aatgcaagtg ctattgcttt aggtatgggg cttgaaaatt tggattttct aaaagatgaa
    10741 attttgcaaa acactccttt gatcttggat gcaaactgct ttttaagtga agctttgctt
    10801 tggtatttaa acagaaaaga tgttgttata acccctcatc caaaagaatt tataaaactt
    10861 tataaaatgt gctttgatga gaatttagat atagaaacat tgcaaaaaaa tcgctttttc
    10921 tatgctagaa aattttcaca aaattatgat tgtgttcttg ttttaaaagg agcaaatcct
    10981 attattgtgc aaaaagaaaa attatttgtt gtaaatttag gaaatcaagc cttagctaaa
    11041 ggtgggagtg gagatgtttt aagtggaatg attgctgcac atttaggttt tggttttagc
    11101 gctttagaag cagcaaaaaa tgctacttta gctcatggac ttgttgcaaa aaaatataaa
    11161 tttaataaaa atagctttga cgctttaaaa cttatcaaag gattaaaatg cttgtaaaat
    11221 tagctgtact ttttagtgga aatggaagta atttagaaaa tattttagaa aaacttcata
    11281 aaaaaaccat aggggaaaat acctatgaag tagtactttg catttgtaat aaaaaagatg
    11341 cttttggtgt acaaagagca aaaaaatttg gtcttgatac tgtcattgtt gatcataagg
    11401 cttataatac tcgtgaagaa tttgatacga ttttggtaca aaaaatcaaa gaaagtggag
    11461 caaatcttac tgtattagca ggttttatga gaattttaag tcctgttttt acaaaaaata
    11521 ttaaggcaat taaccttcat ccttctttat tacccctttt taaaggagca catgcgatta
    11581 aagaaagtta tgaaagtgat atgaaagtag ctggtgtgag tgtgcattgg gtcagtgaag
    11641 aacttgatgg tggaatgatt atagctcaaa aagcttttga aaaaagaaat ttgagttttg
    11701 aagaatttga agaaaaaatt catagtctag aacatgaaat tttaccctta agtgtgattg
    11761 aaattttttc ttaaagaatt aaaggtattt gctttaaaac tataaaatat cgctttaaaa
    11821 aattttaaaa ttttcaagga aatttatgtt tgaatggata tttagtattg atgcttggat
    11881 tactttagct actttaagtg ctcttgaaat tgtactaggg atagataata tcattttttt
    11941 agctatttta gtaagcaaac taccccctga acatcgtgat aaaggacgta tcttaggttt
    12001 agcttttgca atgattacaa gaattttact tcttttatct cttttttggg taatgaaact
    12061 tgtaacacct ttgtttagtg tattgggcaa tgaaatttca ggaagagatc tagttctttt
    12121 actaggtggg cttttcttga ttgtaaagtc tattaaagaa attaaagagc aaatttctca
    12181 tcaagaagaa agtcaaagtc attttaaagc aagcaataaa ctttggatag ttgtagctga
    12241 aattgctgtg attgacatag tgttttcgct tgatagtgtt attaccgcag taggaattgc
    12301 tcaagatgta accatcatga ttatcgctgt tattatcgca gtagctgtga tgctttttgc
    12361 ttctaaacct atagcagatt ttgttgaaaa atatccaagc attaaaattt tagccttagc
    12421 ttttttggtg ctaataggcg tagttttagt tgctgaaagt tttgatattc atattgataa
    12481 ggcatatatt tataccgcta tggcttttgc tttagtggtg caaattttaa atattttaga
    12541 tcaaagaaag gaaaaaaatg gctaaagacg ctaatggaat agaacttaac acaggtgata
    12601 gcgtgagtgt aataaaagat cttaaggtta aaggtgtaag tacaacttta aaacgtggaa
    12661 ctactataaa aaatattaag ctcacttcta aagaaggtga aattgaggct agagtagata
    12721 aatttggcgt tattgtttta aaaactgaat ttttaaagaa aatctaggca aagaatgtgc
    12781 gaatcttact tgttttaaga gggaattatt acgcaggaca agaagaattt atcaaaaata
    12841 ataaacttca aaattataca cttgatttaa atgctttgcg tcttttatca ggaagcgtta
    12901 aaaatatagt cagtgaatat aaaattttaa atgttaaaaa tgatgaagat ttgagtaaaa
    12961 ttttactcaa acttctagaa atgcgtatgc aaaaaggtga gtttagcatc ataaacgctt
    13021 acaacgaaac attaaaaatt tataaagact tagctaaaca atatcgctat aaaatatatg
    13081 ttattgtttt tgatagctct ttaaaacaat gtcaagaaaa aaatctttta gaagctaaaa
    13141 aaaatggata tatcattcct tatgctcttt tggaaaaaac tcaagatttg ctcaaaaaaa
    13201 atccaaaaaa atacccaatt ttagactcaa gagactggaa aaaatgtctt taccaaatgc
    13261 caaatttaag caaatacaaa aaaattcatc atataggaga tttacaaggt tgctatagtg
    13321 ttttaaaaga atacattaaa acaatcaaag aagatgaatt ttatatattt ttgggagatt
    13381 atatcaacag aggtatagaa aatggcaaag taataaaatt tcttttaaaa atttgcgaaa
    13441 aagaaaacgt atgcttatta gaaggaaatc acgaaagaca tcttataaaa tgggctaatg
    13501 gagaattgtc aaattccaaa gaatttaatg aaaatacttt aaaggatttt agaaaagaaa
    13561 aacttactcc aagagatgct agaaaactct atcctcatct aaaagaatgt ttatactaca
    13621 aattccaaaa taaattcata ttttgttcac atggaggagt aaattttata ccctccaaac
    13681 ctgaaaaaat aagttttata ccaagccatg actttattta tggtgtaggt ggatatgaag
    13741 acagtcaaaa agtagcaaat caattttgta atttcacctc ggacaatctt tatcaaatct
    13801 ttggacacag aaataaagaa aaacttccta tgaaaatagc caaaagagta tttttatgcg
    13861 agggtaaaat agatgatggt ggatatttac gcgtagttac actagatgaa aaaggttttg
    13921 agtgtataga aattaaaaac caaatttaca aaaagaaata agcctaaaga ggcttattct
    13981 tcatctttat ttgttttttt aaccacctta acacgctcta tagaattccc atccattttt
    14041 ttaacttcat agtaacaaag ttcatcttca atgcgatctc ctaccatagg caagcgtcct
    14101 aaaagattaa atacataacc acctatagta acttgttcta aatcctcatc atagtttatt
    14161 acaagcattt cttcaacagt ttctatatcg catcgtcctt gaaattcata gatattttca
    14221 gcaagttttt tatagctgtc ttcttcatgc tcgcttttaa tttcgccaat aatttcttcc
    14281 atgatatctt ccatggttaa aattccagca gttccaccat actcatcaac tactaatgca
    14341 gtatgagagc gttctttatt catcattaca agtacttttg aaatgctgat attttcagga
    14401 accaaaatca aaggtttaac aaaagtatct aaattttgac ttttatggtt taattcattt
    14461 tgtattatat ctcgtatgtg tatcatacct aaaatagtat ctttagagcc atcaatataa
    14521 ggaaagcgag tatgtttatg ctcacaaatg atttgcatat tttcttcgta acttttttgt
    14581 ttatttagac aaatcatatc ttttctagga gtcataatct ctttagcaac agtatctgaa
    14641 aaatcaacag cattgcgtat gatctctgtt tcaaattcat ctaaaactcc acctttttga
    14701 ctctcacttg ctatgatttt aatttcttct tcgctatgag ttagctcgct ttctttagca
    14761 ggttttattc caaaaagttt caaacttata gctgctaaaa aatcgaaaat tttaatacaa
    14821 ggcaaaaaga gcatccaaaa ccaatgaagc ggtctagcta taaataaaac cgctttatct
    14881 gcaactgcaa tagctatact ttttggcaca agttctccta aaaccacatg taaaagagta
    14941 ataatgctaa aagcaataat gaaagccata gtatggataa taacagtgct aaaaccaaga
    15001 ttaataagcg gaatttctag catttttgca atagcaggct cacctatcca accaagagct
    15061 agagaactta aagtgattcc taattgacaa gcactaagat aagtatcaag tcttgaagta
    15121 acctccaaag ctttcttggc accagctttt ttttctttta ccatctcttc aagcttggaa
    15181 cgacgtactt taacaatact aaattcagac aaaacaaaaa aaccatttaa aaacactaga
    15241 gcaagtgcaa caacaaccat aagtatagaa tatcctgcat caaaagatgc tgtagaagtt
    15301 tggtttaaat ccaaaacctg actggggtcc aatgaagctc cttaagaaat aaaatattat
    15361 taaaccttat tatacacaat taaaagtaaa tttaatattt gaattttttc ttgtatttta
    15421 taagaaaaaa ctaagactta taagaaatat ttttctcaaa ttcttttaaa cgcttatata
    15481 tacttctaag ttgagtgata gttgtccagt ttgtgataaa aatactaaaa gagcttcgca
    15541 cttgatcaaa tgcattatta atctgcatta caataccaag tcctatagct ccagcaaaaa
    15601 gccctggtgc catgattaaa aatggcacta taactatcat ttgctcaaat aaaatgagcc
    15661 aaatattaaa atatccataa tgtaaaaaaa gtcttttata gttaaattta agccctgtaa
    15721 aaagctctat catagtctca tttttagcgt attctttgcg attatcctca gcataaacaa
    15781 gctcttttct aaaagctgct tcagcttttt gattgttata ttcaagtcca ggaagcttaa
    15841 tacctacaaa ccatgacaca accaagcctc ctaaagaaat caaaagtgca atataaacaa
    15901 gcaaaccatc aatgtttttt aaaaaataaa aaaaagaatt ttcgcttaaa tttgcaaata
    15961 aagctttact cacaacatca cttaaactcc ataaaatcgg aataaatgct acaagggtca
    16021 tcaaagcttt tataaaacta agtcctaaac tctctacgat tttagaaaaa ttataagtat
    16081 cttcttgaat tctttgcgaa cttccttcta tattatcatc tttatttttc caaaatttta
    16141 aataagaaaa agtcatagcc tcacgccact taaaagcata gacgctagca aaatagatat
    16201 taattgtagc gattaaaaca taaggaatag caatagccaa aaaaactaaa atcaaagcat
    16261 aaaaatcact tgctgaataa tttggctttt caatcatagc cctagagttg aaaaaatatt
    16321 ctaataaatt ttgataataa tacaatgcgc ctttattgat aaaattagct ttttggaaat
    16381 tttgctcagc tctttgatta gcctcttgga ttaaagtggc attattttca agattttctt
    16441 ctattttttg cgtagaatta gaatccaaaa gttctatttt tggcttttgt aaaacattgt
    16501 aaaaatcact ataccatgaa ttgatcgcaa catttaagct tgtttgtata tataagaaaa
    16561 ataacagtaa aaaaagtccc aaataagccc ataaagccca ttttttactt ttaaaaaacg
    16621 aagagaacat aatcatcacc tttaaaataa aaattctaat aaactttttt taatgaaaag
    16681 tttatttttt acctaaatag tctttaatat tgtaatcaat aggcataaca aaactgattt
    16741 tatcaccatt ttttaacatt tctttaggcg gttttggcaa tggagaagct cttttaaata
    16801 aacttaaagc ttcatcattg agcgctgcat aagggcaaga ttttttaagc tctttgctta
    16861 agacatttcc gctttcatca atgcttacgc gaattcttac aacgccttct tgtttttgca
    16921 ttatcgcttc ttgaggatat tttttaaatt tagtcaaatg agccataagc aaagcttgat
    16981 agcttttaac ttgttctttg gcattgccac ttactatagt ttgtgtttta tctttattac
    17041 tttgtagcgg agcactgagc gattcatttt taaattttga attttcactt gcattagcta
    17101 tttctttttg agcttggttt tcatcttgct tttcaatctt tttttgaact tttaatacag
    17161 catttttatc ttgagaatta aaacttattc tttcgtcttg ttttttgttt ttatcttgag
    17221 aattactctt tttttgatca atcgaaactt cttttaattc cccgatagga aactctgata
    17281 ccatcataat ggaagtaaat tccgctcctt gtttaaaatc aacaccactt gatttttctt
    17341 gagtataaaa agaaaaaagg aaaaacatta atactaaagt atgcaatatc aaacttaaca
    17401 caaacccaaa aatcacacta gacttcatac taatccatct ttttacttga aagagctatt
    17461 tttccatagc cattctcttt taatttttgc attacttgca taatatcttc atactttaca
    17521 cttttatcga tatgaaaata aataatttct tctttattgc ctttggtttt tatatctaaa
    17581 gcacttgaaa gattttctag gcttaattta tcatcattaa tagccaaagt attatcagta
    17641 tttaaataaa gtatgatggg atttttaagc ttatcctctg cttgctgcga actcttgggt
    17701 aattctattt tgatagaact tgtgataaga ggagtaacag ccataaaaac aatcaataat
    17761 acaagcataa tatctataaa aggagttata ttgatctcac ttaactcctc ttctttgtga
    17821 gccatttcag tttttatcat taaaataact cctatgaaaa agtatataga caaaatttgc
    17881 aagctcatct aaatggtgca taagttttaa attttttctt gtaagataat tataaaaaag
    17941 caccgcaggg atagcagcta tcaagccaaa agctgtagca aacaaggctt cagctatacc
    18001 aggcgcaacg actgccaaag aagcattgcc aagatttgct atacctataa atgcattcat
    18061 aattccccaa actgttccaa aaagccctat aaaaggtgcg ctagcaccta tgctcgcaag
    18121 caaactcaag ccatttttgc ttgctgtgat ttgctttgag atggtatttt gcaaacgcaa
    18181 ttctatacgc tcttttatgt gatcattttt atattcactt ttttcaagct catcttgaat
    18241 ttctaaagat aaaacacctg caaaatcttt tgtctgatct aattcattga gattttttaa
    18301 ttcttttatc ttttgtatag acaagtctag attttttttc ataaaataaa attgcataag
    18361 cttagaaata aaaactgccc atgctaaaat ggaaaataaa accaatatat aaataacacc
    18421 ttttaccacc tcatcagcat tttgataaag actagaaaga gaaagctcta ttttaggtgc
    18481 ttcggtttct atcttagaag aatcaaaaga taaatttgta tctgttgcat ttgcttctgc
    18541 atttaaattt aacaataaaa aaacaaaata aaaacatttt tttaacattt gtatattcct
    18601 taatatttat attcaaaact tactataaaa gtacgaccgc gagcagaatt gctaaaaaga
    18661 tagataggat cacctgctcc attatattga agctgattat ctaaggaatt ataagcattt
    18721 aaggcatcca tgtagttttt atcaaataaa ttttgcacct ctgctctcat tgtgaggttt
    18781 ttaaaccatt ctatattcca atataaatct actataatag gaatttttgg taagtcttgt
    18841 gtggttggtt taggataata aggattgttt ggatccttat tccaatcatc tgtatttgga
    18901 tttacccttt ttgctttgcc tgtgtatttt gctataccac caaagcttat tttatcattt
    18961 aacctaaagc caagctctac atttgcataa tcttttggaa gctccatgat tttacttgcc
    19021 gaaaaagagc caagaagagg tcctgaagtt tgagaaatag tcgaacttgt atcttgtctt
    19081 gaatacatag ctttagcata agcaaaaccc aagtcatagc ttaattctaa ctccacaccc
    19141 ttaaatatgg tatcatcagc tgaatttaag tgcatataaa attgcgagct tggaggatct
    19201 ttacttggat cttcaagata aaattgttca ttataaatat aatcttttat ttttgtatga
    19261 taatacacgg ctttaaaacc aaagcgatca tcatctttta aaagtccatg tttaaaagaa
    19321 ttaaaaccta tttgccaagt attggcttgt tctggtttta agaaagaatt gataccattg
    19381 ccttcgttat ttgagaaaaa catttcttgc acattagggg ctctatttgt tctcgcaaaa
    19441 cttacaaagg gtgtaaaaag ctcgtgtatg gcagctgaaa gcatgacaga agcattcagg
    19501 cgaagtccat ttttatctat atctgtcgcc gcttttggaa aacacataaa atttacttca
    19561 tcgcaagcag gtctgtgtcc tttgatattc caatctaaaa gattcacatt ggtatcaagt
    19621 gtaaagatac cataatttag actattatca agataataag taaaaagatt ttgttttcca
    19681 cgaggctgaa aaggtataga atttactcct tgaattgatg tatttaaggt atttttataa
    19741 tcattaagca aaatatttgc tccaaagcgt atgtttagat taaatctatg ccattcaccc
    19801 tctaaagtat cacttatatc aaaagtagtg gcagtatttt ttgcctttgt gttagctatg
    19861 gcatcgtttg ccgcaaaagt agattttgat ccataggttt gtatgccttg attgtaggca
    19921 ataagcgtat ttacattaag ccactcatta gggttgtgcc aaaaatcaag ttgataattg
    19981 tcattgtgta tttttctacc ggcaagttcg ttttgatatc tacgataaga aaatatagtg
    20041 tttgtaaaag aatttgggac atattcgagt ttaaaaagtt gagagtttgg tttttgggtt
    20101 aaaaaatctg gatcaaaagg agcgatattg gtatcagcta taccatctcc atcagtatca
    20161 accatactac tacctatctt gccacccccg cctacagtgt aattttgagt aattctcttt
    20221 gcgctataac caaaaagcgc gcccacatat ccattatttt caagttcagt ctttccagcc
    20281 actgcactca tataacttgg tccgattcca ttgcttccat aagaaaatcg tcctaaaaat
    20341 ccaaagatat tgccatcatg tacaatatca tttataccta tggtcttaaa atttgctgat
    20401 cccatcaagg catttgctcc acctactcct tcaaaagttc cccttgtaac atcaactccg
    20461 attaagaaat ttgtatcaat aacagctcca aaagctgaag ttcccgtttg tgaatgaaat
    20521 ctagctggat catctgatgc actaccataa aaagtttgag taacaccgtc aatcatggta
    20581 ttaacacgcc caaaaccact cataccacga atatttactt gaactgtgcc ttgagcttga
    20641 tctgtgtttg tgtaggttcc aggtatacta cgcactatag aatctatact ttgtgtatct
    20701 gaacctatac cctctcttgt gcttgttgcc ccaggagtta caaaaggttt ttcatcgttt
    20761 ttgatttttg aacctgaaat ttcaagacta tcaaattcta attcttcaga aaaagcaaaa
    20821 ctagcaaaac ataaacctac agcacaaaat aaacttaatt ttttcattcc tcccccttat
    20881 aaatcaaaac ataatcactg tcttttaaat ctatttctcc atagcttaaa ttcactacaa
    20941 ctattttttt actgctttta aaatcttgta tatgtaaagg aattcctatt tttttacttg
    21001 tatgatagct tccagctagc aataaaactt tatttacatg atgaaccaat acatcagcca
    21061 tacgcctgtc tttgaattgt tgaatttcca ccaatttatc tagtaattct ttattttctt
    21121 caggatttag cttatggctt aaggatataa tgtcaaaaag ttgttttttt acttcatttg
    21181 tggttgaaac ataacccttt aagggctgag ccccattata aatgcttgta atttctgagc
    21241 gtgaaagatt tgcacctaat atttttgact ttgaataaaa aaccacattg acaaattgct
    21301 cataatcttt ccatttccag accttatccc aatttaatgc attagtaagt tcattggctt
    21361 taatggtttt tttattttta aaagctttat ctaagtgatt ttgctctgtg cttgctaaca
    21421 tttctaaagc tacatcaaag tttatatttt gagaacttaa atttccttct aaggcattaa
    21481 aaatcataac ttgacttatc ttatgtttaa cctcatcgtg tttttcgcca agcagtatca
    21541 catctgcttt tagcaattct aaaatcatat cttcaaaaga aatctttttt tgagtatgcg
    21601 tatcaagtat ataaaaatct ttattttctt gaagtggaga tgatttttgc aaaacagcac
    21661 aagcgctcaa cataaagctt ataaatagaa tgcttaaaat agtataaaat ttcattatta
    21721 ttgttacttt cttagtggtt tatttt
//
LOCUS       DAPIYB010000023        20976 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.023, whole genome shotgun sequence.
ACCESSION   DAPIYB010000023 DAPIYB010000000
VERSION     DAPIYB010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20976)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20976)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20976
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.023"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            241..525
                     /gene="gatC"
                     /locus_tag="RJ318_000661"
     CDS             241..525
                     /gene="gatC"
                     /locus_tag="RJ318_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HDV7430553.1"
                     /translation="MQIDEKLLSKLEKLSALQITKNRNETIAQLSEIVNFVEKLNELD
                     LDSQEITVSTIKGGAPLRIDEIRNSNVIDEVLDCAPKKQEHFFVVPKIIE"
     gene            593..1156
                     /locus_tag="RJ318_000662"
     CDS             593..1156
                     /locus_tag="RJ318_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDV7430554.1"
                     /translation="MNFYWFDAFILGFTLLLGLKGIINGLIKEIFGLLGIIGGVFIAS
                     KYATQAAEFIQSTFYKIENQSLAGFAGFLAILIIFWIACLLAGNFLSKLIKLSGLGFL
                     DRIGGFIFGGAKIFLIFAILVFCVARIDFLNDKLDNFAKNSYTLNLLKETGSFIMNQP
                     LTENSLDHASEKLQDIVSDLNNTQKGE"
     gene            1158..1631
                     /locus_tag="RJ318_000663"
     CDS             1158..1631
                     /locus_tag="RJ318_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDV7430555.1"
                     /translation="MLIENVEYDVLLERFKKILRQGGLKYTKQREVLLKTLYHSDTHY
                     TPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTSISFGSAGKKYELANKPHHDH
                     MICKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCGDCNNQKAKVKI"
     gene            1632..3137
                     /gene="lysS"
                     /locus_tag="RJ318_000664"
     CDS             1632..3137
                     /gene="lysS"
                     /locus_tag="RJ318_000664"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDV7430556.1"
                     /translation="MFDNILEQQRIEKAKELKNLGINPYPHFLEKEMSLKTFKDKFSY
                     ILEQVEKRDESVNAVVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYTIL
                     KKNLEVGDIVLVKGFPFVTKTGEFSLHASEVKLATKAIVPLPEKYHGLTDIEQRYRKR
                     YVDMIMNVEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHN
                     SLGVERFLRIAPELYLKRLIVGGFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHN
                     YKDLMDLTEELFALLLDKLNLGKTIEFDGKMINFSKPFERITYKDALCKYGGLDRDLI
                     EDKEKILTKLKADGFEANEKLELGHLQAELFDNYVEEKLINPTFVIDFPISISPLSRR
                     SDEDSQIAERFELFICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDF
                     VNALGYGMPPTAGQGIGIDRLVMLLTNKKSIRDVILFPAMRPLKSELKEKE"
     gene            3134..4378
                     /locus_tag="RJ318_000665"
     CDS             3134..4378
                     /locus_tag="RJ318_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDV7430557.1"
                     /translation="MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGS
                     ILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSGSQANQGVYA
                     ALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE
                     KPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVV
                     SSTTHKTLRGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDE
                     WKVYAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAG
                     ITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDVNNEKLQ
                     ENIKQELKKLASNFIIYERAMF"
     gene            4375..4920
                     /locus_tag="RJ318_000666"
     CDS             4375..4920
                     /locus_tag="RJ318_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1882 domain-containing protein"
                     /protein_id="HDV7430558.1"
                     /translation="MISPMDMSLIKIIGDHYYIRRDKIVNKITHRGRLFFDKFERVDA
                     PLNLNVMREHAAKKIVVAHDLITKDNKVENIVFDYNGFNAERFYHRAQLILREEGFIN
                     FTAYKTKTPGHLHLYIHKGHTALNEGYSLASKLSMMFASKMPVEWKVFPSMDVPREFN
                     ILILPYEVYQKERGSSWSKHM"
     gene            4934..5770
                     /locus_tag="RJ318_000667"
     CDS             4934..5770
                     /locus_tag="RJ318_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HDV7430559.1"
                     /translation="MENQKNEFDDIILEKSNKSEKVKKILLRVIALVILFLAIMIVMK
                     LINGSGDENTQNQSVLPSEPIATQDNNNDTSFESMPITDNTSAEDQFEALRKQFQDEQ
                     NTTQNTTTSSSNNNDTTNFAMPDQEVPAEPTATTSANTTPQASTPKQEVTQTAKSKEE
                     AKKQTAVKKEKESAKQTPKKEQNANDLFKNVDAKPVHPSGLASGIYVQIFSVSNLDQK
                     SKELASVKQKGYDYKLYKTTVGSKEITKVLIGPFEKADIAAELAKIRKDIAKDAFSFT
                     LK"
     gene            5767..6555
                     /locus_tag="RJ318_000668"
     CDS             5767..6555
                     /locus_tag="RJ318_000668"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDV7430560.1"
                     /translation="MKFLAVIGDPISHSKSPRMHNNAIKALGLDSIYTRYHLRNANCL
                     REDFFKLGLSGANITLPFKEKALDIADVKDDFARNIGSANTLCLKEDKIYAYNTDALG
                     FLEAIKDFDNIKKALILGAGGTALALAYALKQKGVEVYIANRSKERFKDFLAYPTYLY
                     KNLQDFDFDLVINSTSAGLKDENLPCDRELLDRILPKAKFAFEVIYGRETPFYRLCKE
                     YHLKIKDGLDMLLWQGVFAFELFFEIQDKREMIKNAMQQALILK"
     gene            complement(6630..7529)
                     /locus_tag="RJ318_000669"
     CDS             complement(6630..7529)
                     /locus_tag="RJ318_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7430561.1"
                     /translation="MKKYILLASSMLILAACGGTSSNFVNVSMPNFKPQVPTKVEPID
                     SGVSIALVPINIEQNNNYSDYFENSVLKIRIEKEIDLLKQNLEEQIKTIAQLKGYKIV
                     TTNPDYTLKSSISIYTEEKNVQKTSNFMSGDYVKSNLGINFKGKIDFIDAHNPQNSTN
                     LSSSTKLDSLVALNYPIKNDDGVNMFKTTISTVPTQLNKGLEQPAFEIDKSFLAFYKN
                     TLNTLYNNLPKATDIGKTIPNTNSGFNSFDGDATFEESLPQTNSNQNNTIENAPTQNI
                     PTNPSSTNQNNQSKNQDGVEIFE"
     gene            7619..8434
                     /locus_tag="RJ318_000670"
     CDS             7619..8434
                     /locus_tag="RJ318_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDV7430562.1"
                     /translation="MEFWQHIYSNFNVIAFSIFGLKVHWYGIMYVIALLLALLLAKFF
                     VRKFQLDINEKHLDSYFIWVEIGVILGARLGYILIYDANTMYYITHPWQIFNPYINGE
                     FVGIRGMSYHGAIIGFLIATLLFCKKYKTNPWIFLDLVALSVPLAYVFGRIGNFLNQE
                     LFGRITNVPWGIYVDGVLRHPSQLYEAFLEGIVVFIIVYLARFKQSFQGELILVYAGA
                     YSLARFICEFYREPDFGIGFVLWGMSMGQILSFIMFITALLVYICIKFKKVNI"
     gene            8504..9286
                     /locus_tag="RJ318_000671"
     CDS             8504..9286
                     /locus_tag="RJ318_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase cytochrome b subunit"
                     /protein_id="HDV7430563.1"
                     /translation="MRELIEGYLGKSIEGKKSKMPAKLDFIQSASGLFLGLFMWVHML
                     FVSTILVSEDFFNSVVHFLELKFVYDNPVMSYLTSFLAACVLVVFFVHALLAMRKFPI
                     NYRQYQILRTHSKKMNHSDTSLWWVQAFTGFIMFFLGSAHLIFIVTNADKISGDMSGD
                     RVVSHFMWLFYAVLLVCVELHGSIGLYRLCVKWGWFEGKNVKESRKKLKTAKWIISIF
                     FLVLGVLSLAAFIKIGYENYQNQTQTTAMIKNYNGANYEYTI"
     gene            9270..11261
                     /locus_tag="RJ318_000672"
     CDS             9270..11261
                     /locus_tag="RJ318_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase flavoprotein subunit"
                     /protein_id="HDV7430564.1"
                     /translation="MNIQYSDALVIGGGLAGLRAAIEVAKSGQSVTLLSICPVKRSHS
                     AAVQGGMQASLANGAKGEGDNEDLHFADTVKGSDWGCDQEVARMFAQTAPKAVRELAA
                     WGVPWTRVTKGPRTVVINAQKTVIEEKEEAHGLINARDFGGTKKWRTCYIADATGHCM
                     LYGVANEAIKHQVKIIDRMEAVRIIHDGKKCLGVIARDLTNGQLIAYIARGTMIATGG
                     YGRIYKQTTNAVICEGTGAAIALETGLCRLSNMEAVQFHPTPIVPSGILLTEGCRGDG
                     GILRDVDGYRFMPDYEPEKKELASRDVVSRRMMEHIRKGKGVKSPYGDHLWLDISILG
                     RAHVEKNLRDVQDICKTFNGIDPADEGPKGWAPVLPMQHYSMGGIRTKPTGESQWLNG
                     LFACGEAACWDMHGFNRLGGNSCAETVVAGMIVGDYFADYCKNNGEVIDTNVVKDFLT
                     KEYQYLKSLVDKEGKHNVFEIKNRMKEIMWDKVAIFRTGEGLKEAVDELEKLYKDSQD
                     VKVHCKELDCANPELEEAYRVPRMLKIALCVAYGALLRTESRGAHYREDYPKRDDLNW
                     MKRTNTFWVEGETLPRIEYEELDIMKMEIPPAFRGYGAKGNIIENPLSEKRQAEVDAI
                     REKMEAEGKGRYEIQNALMPYELQAKYKAPNQRIGVDYE"
     gene            11254..11979
                     /locus_tag="RJ318_000673"
     CDS             11254..11979
                     /locus_tag="RJ318_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur subunit"
                     /protein_id="HDV7430565.1"
                     /translation="MSRKLTIKAFKYNPLSKISKPHFVTYELEETPFMTVFVCLTLIR
                     EKMDADLSFDFVCRAGICGSCAMMINGVPKLACKTLTKDYPDGVIELMPMPAFRHIKD
                     LSVNTGEWFEDMCKRVESWVHNEKETDISKLEERIEPEVADETFELDRCIECGICVAS
                     CATKLMRPNFIAATGLLRTARYLQDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNC
                     PKELPLQSKIAYMRRQLVAQRNK"
     gene            12007..14193
                     /locus_tag="RJ318_000674"
     CDS             12007..14193
                     /locus_tag="RJ318_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDV7430566.1"
                     /translation="MKELFQKIWQNELQFLNFDAKFQDKSKLDTAECAIILSVNKDNY
                     ERYFLLKEFQELCKKIDLRVDIFSMQNAQICILNLFKSGFISKQDLLKALKILEKISK
                     NTEIFDFILQEKVQSIDQKALFQNDFKELNTINLELQKLSFDENLKSRLQKTLEKFQN
                     LEFNIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLSYGKSEEAKIYFWDKK
                     EWQNILESSHFNADLKEFIDKLDKSVNIEDFIKDKPLIQNIALCELKNFSSAKNKISA
                     LIKKIEIKSHLEFLKNNISIVDTPGLDDVVVQREIVTNEYLRESDFLIHLMNASQSLT
                     QKDADFLVHCLLNSRLSKFLIVLTKADLLSKKDLEEVIVYTKESLKSRLVDLDENLVE
                     KIDFLCVSAKMASDFYKGLASKESLQKSGMQEFENYLFNELYAGEKSKIALRAYKKEL
                     HLELKNILSEYEMQNRLIKENKQGVSEENQKLLLELQKQNTLLKEAQDEISNSIAKLK
                     NIDSGIDNLVLLLAKKLKERLIDEFKYLKNNAQKLNLSRILNIVDITTKDGINDILRE
                     IKFENIKKIEELKTNLSLKYDFLKDDFDNGFEGFKDGISKNIDSIFQSEKFALLRLKI
                     EKLSNLKSDLYELETNLDTVIFDTFKEFKMSEILNSLNINGAFFEFLNDKLKHYEKNQ
                     KSKLESLEKVLQSLKNQDANILNSFEENLEKIEKLKQLEMGLLNAD"
     gene            14183..16012
                     /locus_tag="RJ318_000675"
     CDS             14183..16012
                     /locus_tag="RJ318_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDV7430567.1"
                     /translation="MQINLLNDFIKAYENTYSVSFDDSFKGRIQELCKELNEPFMHAS
                     YALENELKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGRDCLPTGVVPVTFKPTFLR
                     YAKEYFLRVEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTP
                     GLNANENDTLTTLDELKNIHGAIWLSLIDNAGKKSEEDAIKANLELLGENSICVLNQK
                     DKLSAEELDNVLNYAKSVFLKYFNELIAISCKEAKDEQSYEKSNFQSLLDFLTQLDTT
                     VLKEKFVKRKILNLCEILEDENQLFVGIFDRLLNQFQSYEKHLLLAYENFLKEIEILN
                     HQILEQLKSISERISSEIFASVKEKDAYFYKESKGFLKKDLYTRYDYKAPYISSDDAF
                     LAMFYNSDVMSKEFKKIKNELYKSFEEIKMKLKDFINILEREILLFKAEFSNIQKDHI
                     FQSDKNFSELRAFCNASDEYFLKDFKELLFKSILELDLFFEKLNLKAFTNYENATKLS
                     LAFFSRKINESRVLYELDSSEFVLFYPKKSEIYERVLNELNVYEFETLLINKPILTKI
                     AKNFLEQSQNLIQEKNKFLDLKKAELQKRRAQILNVRESIKED"
     gene            16012..16716
                     /locus_tag="RJ318_000676"
     CDS             16012..16716
                     /locus_tag="RJ318_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDV7430568.1"
                     /translation="MRIFLTLFLFFNSLFALSELEEGLKLYEANKFDKAYEIFKSLCE
                     KDISKACFSLAFMHESARGVSKDLNQAYKFYDKACKLGLANACSNMALLLQNQGYENE
                     ALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDK
                     GELVKASVKSALAFYSKSCTLGFGEACYLLGRYNQLEKQDLTKAKRYFGMACDQKHQE
                     ACAAYKELNSKDIELY"
     gene            16852..17580
                     /locus_tag="RJ318_000677"
     CDS             16852..17580
                     /locus_tag="RJ318_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HDV7430569.1"
                     /translation="MQDNIIDRRSFFKLGLLGGSVVAASTIGGGAVLKAAELTHSHQA
                     SQGKSNKIRGRMFFQTQTEFDTLSAACERIYPKDEQGEGAIGLGVPYFIDNQLASAYG
                     YNDREYMQGPFMEGKAEQGYQTPMQRKDIFLEGVHALEENAQKRYKKSFSLLKGGDQD
                     KILSDFEKGKIQTTGFKSSYFFTLLRDMTVAGVLADPIYGGNDNKNGWRMMQYPGAQM
                     SYVDKIASDEFFNIEPMGLADMES"
     gene            17582..19303
                     /locus_tag="RJ318_000678"
     CDS             17582..19303
                     /locus_tag="RJ318_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HDV7430570.1"
                     /translation="MAEVLKKVDVVTVGAGWTGGIVAAELTKAGLNVLSLERGHMQST
                     ENFNYIHDEWRYGINYGLMQDCSKDTVTFRHDPSGLALPYRKMGSFLLGNNVGGAGVH
                     WNGWTFRFMPYDFEIQTLSKQRYGNKLGNDYTLQDWGVTYKDMEPYYDRFEKTCGVSG
                     EPNPLAEKMGAFRSSPYPQEPLENTKMLKRFESAAKSSNLHTYRLPASNSKGGYTNPD
                     GQDLAPCQYCAYCERFGCEYGAKASPLNTVIPKAMSTGKYTIRTYSNVTQILKKDGKV
                     TGVKFVDTRTMKEYIQPADIVVLTSYMFNNAKLLMVSNIGEQYDPKTGKGTLGRNYCY
                     QMNMGTTAFFDEQFNTFMGSGALGTTSDDFNGDNFDHSKEKFLHGAMIYSVQLGTRPI
                     QSAPLPAGAPTWGAEFKKALNYNFTRAITVGGQGASLPHKNNYLSLDPTYKDAFGMPL
                     LRLTYNFTDQDRALHKFITDKTAEVAKRMQGVKSIKKGAYLKDYSVVPYQSTHNTGGT
                     TMGADRETSVVNTYLQHWDADNLFVVGAGNFQHNSGYNPTDTVGALAYRCAEGILKYH
                     KSGKSLA"
     gene            19592..19784
                     /locus_tag="RJ318_000679"
                     /pseudo
     CDS             19592..19784
                     /locus_tag="RJ318_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857465.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(19862..20566)
                     /locus_tag="RJ318_000680"
     CDS             complement(19862..20566)
                     /locus_tag="RJ318_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430571.1"
                     /translation="MQISSSYNSYDYYSSKPSFDKTNQSDSTQKDEKNLSENKDDKEK
                     NGEQTQMVNGVELSQKEVAQVRELQSIDRNVKAHEAAHQAAGGGLAGAASFTYTRGPD
                     NQMYATAGEVPISMQKGNTPEETIANARQIAAAAMAPADPSPQDYKVAANATKMEFEA
                     RAEAMKLKAEEAKEKEEENKEKDDKNSENSLEKTDKDSKNNDKNSNFDKDFKNLVTRT
                     YQQNSQNNDIKFSIAS"
     gene            20674..>20976
                     /locus_tag="RJ318_000681"
     CDS             20674..>20976
                     /locus_tag="RJ318_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HDV7430572.1"
                     /translation="MIYENDLIYIEKEEAQVPWLKIFTKEIYKEFSDCPLELQKELFE
                     KILFCEKAMIEFYKPEKINIASFANYVPRVHFHVMARFKEDAFFPECMWGKQQRETI"
BASE COUNT         7398 a         2525 c         3933 g         7120 t
ORIGIN      
        1 tgcgtataaa tctctctcct ttgataaaat tttctataaa ttgttcttct gtgttaagtt
       61 catttttaac agcttttaaa ttatctttta gtcccaaaat ttatccttga aaaaatattt
      121 ttatttttgt atagaaaaat tatagtattg tatcatataa attgcaaaat atcctaaaca
      181 atttaaagct ttttatgata taattttcaa aattttaact tttttattaa ggtttaagaa
      241 atgcaaatag atgagaaatt attaagcaag cttgaaaaat taagtgcttt acaaataaca
      301 aaaaacagaa atgaaaccat tgcacagtta agtgaaattg tgaattttgt tgaaaaatta
      361 aacgaacttg atctagattc ccaagagatt actgtgagta ctataaaagg tggagctcct
      421 ttgaggattg atgagataag aaatagcaat gttattgatg aggttttgga ttgtgctcca
      481 aaaaaacaag aacatttttt tgttgttcct aaaatcatag aatgattaac ttagcattta
      541 gtgcttattt gtagaataaa tttaaaacaa aaaaaatcag agagtgattg aaatgaattt
      601 ttattggttt gatgctttta ttttaggatt taccttgctt ttagggctta agggtattat
      661 caatggtttg ataaaagaaa tttttgggct tttgggtatt attggtggtg tttttattgc
      721 ttcaaaatat gcaactcaag cagctgaatt tatacaaagt actttttata agatagaaaa
      781 tcaaagctta gctggatttg ctggattttt ggccatatta attatttttt ggatagcttg
      841 tttgttggca ggtaattttc tttctaagtt gattaaatta agtggcctag gttttttaga
      901 tcgtattggt ggctttatat ttggcggggc aaaaatcttt ttaatttttg caattttagt
      961 tttttgtgta gcaagaatcg attttttaaa tgataaatta gataattttg ctaaaaatag
     1021 ctatactttg aatttgctta aagaaactgg atcttttatt atgaatcaac ctttaacaga
     1081 aaatagtcta gatcatgcta gtgaaaagtt gcaagatatt gtaagtgatt taaacaatac
     1141 tcaaaaaggg gagtgatatg ctgatagaaa atgtggaata tgatgtttta cttgagagat
     1201 ttaaaaaaat attaagacaa ggcggactta aatatactaa gcaaagagaa gtgcttttaa
     1261 aaactcttta tcacagtgat actcattaca cacccgaaag tttatatatg gaaatcaaac
     1321 aagctgaacc tgatttaaat gtaggaattg caactgttta tcgtacttta aatttgcttg
     1381 aagaagcaga aatggtaact tccatttctt ttggttcagc aggtaaaaaa tacgagcttg
     1441 ccaataaacc tcaccatgat catatgatat gtaaaaattg cggaaaaatt atagaatttg
     1501 aaaatcctat tatagaaaga cagcaagcct tgattgcaaa agaacatggt tttaaactta
     1561 cagggcattt gatgcagctt tatggtgttt gtggtgattg taataatcaa aaagcaaagg
     1621 taaaaatata aatgtttgat aatattttag agcagcaaag aatagaaaaa gctaaggaat
     1681 taaaaaattt agggatcaat ccttatcctc attttttaga aaaagaaatg tctttaaaga
     1741 cttttaagga taaattttct tatattttag agcaagttga aaaaagagat gaaagtgtca
     1801 atgctgttgt tgcaggacgt ttgaaacttt tgcgtatagc tgggaaatcg atttttgcaa
     1861 acattgaaga tgaggataca aatttacaaa tttattttag taaagatagc gtaggcgaag
     1921 agctttatac gattttaaaa aagaatttag aggtgggtga tattgttttg gttaaaggtt
     1981 ttccttttgt aactaaaaca ggtgagttta gtttacatgc aagtgaagta aaactcgcta
     2041 caaaagctat tgttccttta cctgaaaaat atcatggatt aacagatatt gagcaaagat
     2101 atcgtaaacg ttatgttgat atgataatga atgtcgaagt tagaaaagat tttttagtgc
     2161 gttctaaagt ggtgagttta atccgtcatt tttttgaaaa taaaggcttt ttagaagtag
     2221 aaactcctat gatgcatccg attgcaggtg gagcaaacgc taagcctttt gtaacttttc
     2281 ataattcttt aggcgtagaa agatttttaa gaattgctcc agaactttat cttaaaagac
     2341 ttatagtagg tggttttgag gcggtttttg aaatcaatcg ttgttttaga aacgaaggta
     2401 tggatttaac tcataatccc gaatttacaa ctatagaatt ttattgggcc tatcataatt
     2461 ataaagattt aatggattta accgaagaac tttttgcttt acttttggat aaacttaatt
     2521 taggaaaaac aatagaattt gatggaaaaa tgataaattt ttctaaacct tttgaaagaa
     2581 taacctataa agacgcactt tgtaagtatg gtggtttaga tagggattta atcgaagata
     2641 aggaaaaaat tcttactaaa ttaaaagcag atggttttga agcgaatgaa aagcttgaac
     2701 ttggacattt gcaagctgaa ctttttgaca attatgtgga agaaaaattg atcaatccta
     2761 cttttgtgat tgattttcct atttccataa gtcctttatc aagacgtagc gatgaggatt
     2821 ctcagattgc tgagagattt gagttgttta tttgcggaag agaattggca aatggtttta
     2881 atgagcttaa tgatcctctt gatcaatatg agagattttt aaaacaaatt gaagctaaaa
     2941 atgcaggcga tgaagaggct tgtgaaatgg atgaagattt tgtaaatgct ttgggttatg
     3001 gaatgcctcc aacggcaggg cagggcatag gtatagatag acttgttatg cttttgacaa
     3061 ataaaaaatc cattcgtgat gtgatattgt ttcctgcaat gcgtccatta aaatcagaac
     3121 taaaggagaa agaatgagtt tagaaatgtt tgataaagaa atttttgatt taacaaacaa
     3181 agagttagag cgtcaatgtg aaggtcttga aatgatagcg agtgaaaatt tcactttacc
     3241 tgaagtaatg gaagttatgg gaagtatctt gacaaacaaa tacgcagaag gttatccggg
     3301 taaaagatat tatggtggtt gtgaatttgt tgatgagatt gaaactctag ctattgaaag
     3361 atgtaaaaaa ctttttaatt gtaaatttgc taatgttcag cctaattcag gttctcaagc
     3421 taatcaaggt gtttatgcgg ctttgattaa tccaggtgat aaaattttag gaatggattt
     3481 aagtcatggc ggacatttaa ctcatggtgc aaaagtaagt tcttcgggca aaatgtatga
     3541 aagctgtttt tacggcgtag aacttgatgg aagaattgat tatgaaaaag taagagaaat
     3601 tgctaaaaaa gaaaaaccaa aacttatagt ttgtggagct agtgcttatg caagagtgat
     3661 tgattttgct aaatttagag aaattgctga tgaaataggt gcctatcttt ttgctgatat
     3721 agcacatatt gcaggtcttg ttgtggcagg tgagcatcca agtccttttc catacgctca
     3781 tgtagtaagc tcaactacac ataaaacttt gcgtggccca agaggtggta ttattatgac
     3841 aaatgatgaa gagcttgcta aaaaaattaa ttctgccatt tttccaggta ttcaaggtgg
     3901 tcctttgatg catgtaattg ctgcaaaagc agtaggattt aaatttaatc ttagcgatga
     3961 gtggaaagtt tatgcaaaac aagtaagaac taatgctcaa gttttagcta atgttttaat
     4021 ggatagaaaa tttaaacttg ttagcgatgg aacggataat caccttgttt taatgagttt
     4081 tttagatcgt gaatttagtg gaaaagatgc agatttagct cttggaaatg caggtattac
     4141 tgcaaataaa aataccgttc caggagagat tagaagtcct tttatcacaa gtggattaag
     4201 acttggaact ccagccctta ctgccagagg ttttaaagaa aaagaaatgg aaattgtgtc
     4261 aaattatatt gcagatattt tagatgatgt taataatgaa aaattacaag agaatattaa
     4321 acaagaatta aaaaaacttg caagtaattt tattatttat gaaagggcta tgttttgatt
     4381 tcaccaatgg atatgtcgct aattaaaata attggcgatc attattatat aagacgtgat
     4441 aaaattgtaa ataaaattac acatagaggt cgcttatttt ttgataaatt tgaaagagtt
     4501 gatgctcctt taaatttaaa tgtcatgaga gaacacgctg ctaaaaaaat tgttgtcgct
     4561 catgatttaa taacaaaaga taataaagta gaaaatattg tctttgatta taatggtttt
     4621 aatgctgaaa gattttatca ccgtgcacaa cttattttaa gagaagaagg ttttataaat
     4681 ttcacagcct ataagactaa aactccagga catttacatc tttatattca caaaggacac
     4741 acggcgttaa acgaaggtta ttctttagcg tctaaacttt caatgatgtt tgcaagtaaa
     4801 atgccagtag aatggaaggt gtttcctagc atggatgtac ctagggaatt taatatttta
     4861 atattgcctt atgaggttta tcaaaaagaa cgaggaagtt cttggtctaa gcatatgtaa
     4921 gaaaggacaa attatggaaa atcaaaaaaa tgaatttgat gatattattt tagaaaaaag
     4981 taataaaagt gaaaaagtaa aaaaaattct tttacgagtt attgctttag ttattttgtt
     5041 tttagctatc atgatagtta tgaagcttat taatggtagt ggtgatgaaa atacgcaaaa
     5101 tcaaagtgta ttgccaagtg aacctatagc aactcaagac aataacaatg atacttcttt
     5161 tgaaagtatg ccaattacag ataatacttc agcagaagat caatttgagg cattaagaaa
     5221 acaatttcaa gatgaacaaa atacaactca aaatacaaca acctctagtt caaataacaa
     5281 tgatactaca aattttgcta tgcctgatca agaagttcca gcagaaccaa cagcaactac
     5341 ttcagcaaat accactccac aagcaagtac tcctaaacaa gaagtaacac aaactgcaaa
     5401 atctaaagaa gaagcaaaaa aacaaacagc tgtaaaaaaa gaaaaagaaa gtgcaaaaca
     5461 aacccctaaa aaagaacaaa atgcaaatga tttatttaaa aatgttgatg ctaaacctgt
     5521 acatccaagt ggtttagcat cgggtattta tgtgcaaatt ttctcagtaa gtaatttgga
     5581 tcaaaaatca aaagaacttg cttctgtaaa gcaaaaaggt tatgattata aactttataa
     5641 aactacagtt ggaagtaaag aaattaccaa ggttttaata ggaccatttg aaaaggcaga
     5701 tattgcagca gaacttgcta aaatccgtaa ggatattgca aaagatgctt tttcttttac
     5761 tttaaaatga aatttttagc agttataggc gatcctattt ctcactctaa atcgcctaga
     5821 atgcataata atgctattaa agccttaggg cttgatagca tttatacacg ctatcattta
     5881 agaaatgcta actgtttaag agaagatttt tttaaattag gacttagtgg agctaatatt
     5941 actttgcctt ttaaggaaaa agctttagat attgctgatg tgaaggatga ttttgctaga
     6001 aatattggct ctgcaaatac tttatgctta aaagaagata aaatttacgc ttataatact
     6061 gatgctttag gttttttaga agctattaag gattttgata atataaaaaa agctttgatt
     6121 ttgggtgctg gaggtacagc tttggcgctt gcttatgcat taaaacaaaa aggcgtagaa
     6181 gtgtatatag ctaatcgtag taaagaaaga tttaaagatt ttttagctta tccaacttat
     6241 ctttataaaa acttgcaaga ttttgacttt gatttggtta taaattcaac ttctgctgga
     6301 ttaaaagatg aaaatttacc ttgtgatagg gagcttttag atagaatttt acctaaagct
     6361 aaatttgctt ttgaggtaat ttatggcaga gaaacacctt tttatagatt gtgtaaagag
     6421 tatcatttaa aaattaaaga tggacttgat atgcttttat ggcaaggagt ttttgctttt
     6481 gaactttttt ttgaaataca agataaaaga gagatgataa aaaatgcaat gcaacaggca
     6541 ttgattttaa agtagaatga tagttatttt tcttgtataa gaaaatctta ttttttgtgt
     6601 gagaaagttt aattttccca caagttttat cattcaaata tttctacccc atcttgattt
     6661 ttactttgat tattttgatt tgttgaagat ggatttgtag gaatattttg tgtaggcgcg
     6721 ttttcaattg tattattttg attagaattt gtttgaggta agctttcttc aaaggtagca
     6781 tcgccatcaa aactattaaa accactgttt gtattaggta tagttttgcc tatgtctgtt
     6841 gcttttggta gattgttata aagtgtattt aatgtatttt tataaaaagc taaaaaactt
     6901 ttatcaattt caaaagcagg ttgctctaaa cctttattga gttgagttgg tacggtagag
     6961 atagtagttt taaacatatt aaccccatca tcatttttaa taggatagtt aagcgcaact
     7021 aaagaatcta gtttagtgct acttgaaaga ttggttgaat tttgtggatt gtgtgcatct
     7081 ataaaatcta ttttaccttt aaaatttata cctaaattgg attttacata atctccactc
     7141 ataaaattgc ttgttttttg tacatttttt tcttccgtat aaatactgat tgaactttta
     7201 agagtgtagt ctggattagt agtaactatt ttatagcctt ttagttgagc gatggttttg
     7261 atctgctctt ctaaattttg ttttaaaaga tcaatttctt tttctatgcg aattttaagc
     7321 actgaatttt caaaataatc agaataattg ttattttgtt ctatattaat aggcacaaga
     7381 gcaatgctta ctccagaatc aataggttca acctttgttg gaacttgggg tttaaaattt
     7441 ggcatagaaa cattgacaaa attactactt gtacccccac aagctgctaa aattaacata
     7501 ctactagcaa gtaaaatata ttttttcatt ttttaccttt atttaatgtg tttgtgttaa
     7561 ttatagcaag ttaaagtttt tttgttatat ttttataaaa gaaaattagg aaagatatat
     7621 ggaattttgg cagcatattt attcaaattt taatgttata gcttttagca tctttggttt
     7681 aaaggtgcat tggtatggca ttatgtatgt tatagctttg cttttggctt tgcttttggc
     7741 taaatttttt gtaagaaaat ttcaactaga cattaatgaa aaacatttgg atagttattt
     7801 tatatgggtt gaaatagggg ttattttagg tgcaagactt ggatatattt tgatttatga
     7861 tgcaaatact atgtattata ttactcatcc ttggcaaatt tttaatcctt atattaatgg
     7921 tgaatttgta ggtattcgag gtatgagtta tcatggagca attataggat ttttgatagc
     7981 tactttattg ttttgtaaaa aatataaaac aaatccttgg atttttcttg atttggttgc
     8041 tttaagtgtt ccattggctt atgtttttgg tcgtatagga aattttttaa atcaagagct
     8101 ttttggtcgc attacaaatg tgccttgggg aatttatgtt gatggagtat tgcgccatcc
     8161 atcgcaactt tatgaagcat ttttagaagg tattgttgtt tttattatag tttatttagc
     8221 aagatttaag caaagctttc aaggggaatt gattcttgtg tatgctggtg cttattcatt
     8281 ggcaagattt atatgtgaat tttatcgcga gcctgatttt ggtataggtt ttgttttatg
     8341 gggtatgagt atggggcaaa ttttaagttt tataatgttt ataacagctt tgttagttta
     8401 tatttgtata aagtttaaaa aagtaaatat ttaatctatc ttaaagactt ttgtaatata
     8461 atgaaatgga ttttttttaa tttcttttta caaaggagta aagatgcgtg agcttatcga
     8521 aggttatttg ggtaagagca ttgagggcaa aaaaagtaaa atgcctgcga aattagactt
     8581 tatccaaagt gcttcagggc tttttttagg tctttttatg tgggtgcata tgctttttgt
     8641 ttctacaatt ttagtcagtg aggatttttt taattctgta gtgcattttt tagaattaaa
     8701 atttgtttac gataatcctg ttatgagtta tcttacttca tttttagccg cctgtgtttt
     8761 agtggttttt ttcgttcatg ctttacttgc aatgagaaaa tttcctatta attaccgtca
     8821 gtatcaaata ctaagaacac acagtaaaaa aatgaatcac agcgatactt cgttatggtg
     8881 ggttcaagct tttacaggtt ttattatgtt tttcttaggt tctgctcatc ttatttttat
     8941 tgtaaccaat gcagataaaa tcagcggcga tatgtcagga gatagggttg taagtcattt
     9001 tatgtggctt ttttatgctg ttcttttagt ctgtgttgaa cttcatggaa gtatagggct
     9061 ttatagactt tgtgttaaat ggggttggtt tgaaggaaaa aatgtaaaag aaagtcgcaa
     9121 aaagcttaaa actgctaaat ggataatcag tattttcttc ctagttttag gtgtgttaag
     9181 tcttgcagca tttataaaaa taggttatga aaactaccaa aatcaaaccc aaactactgc
     9241 gatgataaaa aactacaatg gagcaaatta tgaatataca atatagtgat gctttagtaa
     9301 taggcggagg attagcaggt cttagagcgg ctattgaagt agcaaagagt ggccaaagtg
     9361 taacactttt aagtatttgt ccagtgaagc gttctcactc tgcagcggtg caaggaggta
     9421 tgcaggcaag tttagcaaat ggggcaaaag gtgagggtga taatgaagat cttcactttg
     9481 cagatacagt aaaaggaagt gattggggct gtgatcaaga agtagcaaga atgtttgctc
     9541 aaactgcgcc aaaagcagtg cgtgagcttg cggcttgggg tgtgccttgg actagagtta
     9601 ctaaaggtcc aagaactgtt gtaatcaatg cacaaaaaac tgtgattgaa gaaaaagaag
     9661 aagcgcacgg gcttattaat gctagagatt ttggtggaac taaaaaatgg agaacttgct
     9721 atatcgcaga tgcaacaggg cattgtatgc tttatggtgt agcaaatgaa gctattaaac
     9781 atcaagtaaa aattattgat agaatggaag cagtaagaat tatccatgat ggtaaaaaat
     9841 gcttaggtgt gatcgctaga gatttaacta atggacaact cattgcttat attgcaagag
     9901 gaaccatgat agcaacaggg ggctatggta gaatttataa acaaactaca aatgcggtaa
     9961 tttgtgaagg aacaggtgca gccatcgctc ttgaaacagg gctttgcaga ctttcaaata
    10021 tggaagcagt gcaatttcat ccaactccta ttgtgccaag cggtattttg cttactgagg
    10081 gctgtcgtgg tgatggtgga attttacgcg atgtggatgg atatcgtttt atgcctgatt
    10141 atgaaccaga gaaaaaagaa cttgcaagcc gtgatgtggt aagtcgtaga atgatggaac
    10201 atattcgtaa aggcaaaggt gtaaaaagcc cttatgggga tcatttatgg cttgatattt
    10261 ctatacttgg aagagctcat gtggaaaaaa atctccgcga tgtacaagat atttgtaaaa
    10321 cttttaatgg tattgatcca gcagatgagg gtccaaaagg ttgggcgcca gttcttccaa
    10381 tgcagcatta ttctatgggt ggaattagaa ctaaaccaac gggtgaaagt caatggttaa
    10441 acggactttt tgcttgtgga gaagcagctt gctgggatat gcacggattt aatcgtttag
    10501 gtgggaattc atgtgctgaa actgttgtag caggtatgat agtgggagat tattttgcag
    10561 attattgtaa aaataatggt gaagtaattg acacaaatgt agtaaaagac ttcttaacta
    10621 aagagtatca atatttaaaa tctttagtag ataaagaagg taaacataat gtttttgaaa
    10681 tcaaaaacag aatgaaagaa atcatgtggg ataaggtggc catctttaga acaggtgaag
    10741 gtttgaaaga agcagtagat gaacttgaaa aactttataa agattctcaa gacgttaaag
    10801 tacattgtaa agaacttgat tgtgcaaatc cagagcttga agaagcgtat agagtgccaa
    10861 gaatgttaaa aatagcactt tgcgtagctt atggagcgct tttaagaaca gaaagtcgtg
    10921 gggcgcatta tagggaagat tatccaaaaa gagatgattt aaattggatg aaaagaacca
    10981 atactttttg ggtagaaggc gaaaccttac cacgcataga atacgaagag cttgatatta
    11041 tgaaaatgga aattccacca gcattccgtg gatacggtgc taaaggaaat attatagaaa
    11101 atcctttaag tgaaaaacgc caagctgaag tggatgctat ccgtgaaaaa atggaagctg
    11161 aaggcaaagg tcgttatgaa attcaaaacg ccttaatgcc ttatgaattg caagctaaat
    11221 ataaagcacc aaaccaaaga ataggagttg attatgagta gaaaattgac aataaaggca
    11281 tttaaataca atcctttaag caaaatttct aaaccacatt ttgtgactta tgagcttgaa
    11341 gaaactcctt ttatgacggt ttttgtatgt ttgactttga tccgtgaaaa aatggatgca
    11401 gatctgagtt ttgactttgt ttgtcgtgca gggatttgcg gatcttgtgc aatgatgatt
    11461 aatggagtgc caaaacttgc ttgtaaaact ttgactaaag attatcctga tggagtgata
    11521 gagcttatgc ctatgcctgc atttaggcat attaaagatt taagcgtgaa tacaggcgag
    11581 tggtttgaag acatgtgtaa gcgtgttgaa agctgggtgc ataatgaaaa agaaactgat
    11641 atttctaaac ttgaagaacg cattgagcca gaagttgcgg atgaaacttt tgaacttgat
    11701 cgttgtatag agtgtggaat ttgtgtagct tcttgtgcaa ctaaacttat gcgcccaaat
    11761 ttcatagctg ctacagggct tttaagaaca gctagatatt tacaagatcc gcatgaccat
    11821 agaagtgtgg aagattttta tgaattagta ggcgatgatg atggtgtttt tggttgtatg
    11881 tcattgcttg cttgtgaaga taattgccct aaagaattac ctttacaaag taaaatcgct
    11941 tatatgagaa gacaacttgt cgctcaaaga aataaataaa tctttcccct ttttaagggg
    12001 aagattgtga aagaattatt ccaaaaaatt tggcaaaatg aactccaatt tttaaatttt
    12061 gatgctaaat ttcaagataa aagcaaactt gatacagccg agtgtgcgat tattttaagt
    12121 gtcaataaag acaattatga aagatatttt ctcttaaaag aatttcaaga gctttgcaaa
    12181 aaaattgatt taagagtgga tatttttagt atgcaaaatg ctcaaatttg tattttaaat
    12241 ctttttaaat caggttttat ttcaaagcaa gatttactta aggctctaaa aattttagaa
    12301 aaaatttcga aaaataccga aatatttgat tttattttac aagaaaaagt tcaaagtata
    12361 gatcaaaaag ctttatttca aaatgatttt aaagaattaa acaccattaa tttagagctt
    12421 caaaagctaa gttttgatga aaatttaaaa tcaagacttc aaaaaacttt ggaaaaattt
    12481 caaaatttag agtttaatat agccatcact ggcgtgatga atgcaggaaa atcaagtctt
    12541 ttaaatgctc ttttaaaaga agatttttta ggggtttcaa acatacctga aacagctaat
    12601 ttaacagtat taagctatgg taagagtgaa gaagcaaaga tatatttttg ggataaaaaa
    12661 gaatggcaaa atatacttga aagttcgcac tttaatgcag atttaaaaga atttattgat
    12721 aagctggata agagtgtaaa tatagaagat tttattaaag ataaaccttt gatacaaaat
    12781 atcgcacttt gtgagcttaa aaatttcagt tctgctaaaa ataaaatttc agctttaatt
    12841 aaaaaaatag aaattaaaag tcatttagaa tttttaaaaa ataatatttc tatagttgat
    12901 actccagggc ttgatgatgt tgtagttcaa agagaaattg ttacaaatga gtatcttaga
    12961 gaaagtgatt ttttaattca tttaatgaat gcttctcaaa gcttgactca aaaagatgca
    13021 gactttttgg tgcattgtct tttaaattca aggctgagta agtttttaat tgttttaact
    13081 aaagcggatt tgttaagcaa aaaggattta gaagaagtca ttgtttatac caaggaaagc
    13141 ttaaaatcaa gacttgtgga tttagatgaa aatttagtgg aaaagattga ttttttatgt
    13201 gtgagcgcta aaatggcaag tgatttttat aaaggtttag cgtccaagga aagcttgcaa
    13261 aaaagtggta tgcaagaatt tgaaaactat ctttttaacg agctttatgc aggagaaaaa
    13321 agtaagattg ccttaagagc ttacaaaaaa gaattgcatt tagagcttaa aaatattcta
    13381 agcgaatatg aaatgcaaaa tcgtcttatt aaggagaata aacaaggtgt aagtgaagaa
    13441 aatcaaaagc ttttacttga acttcaaaag caaaacacct tattaaaaga agcacaagat
    13501 gaaatttcaa attccattgc aaaacttaaa aatatagata gtggcataga taatcttgtt
    13561 ttacttttgg ctaaaaaatt aaaagaacgc ttgatagatg agtttaaata tttgaaaaat
    13621 aatgcacaaa agcttaatct ttctcgtatt ttaaatatag ttgatattac cacaaaagat
    13681 gggattaatg atattttaag agaaattaaa tttgaaaata ttaaaaaaat cgaggagctt
    13741 aaaacaaatt tatctttaaa atatgatttt ttaaaagatg attttgataa tggttttgaa
    13801 ggttttaaag atggaatttc aaaaaatata gatagtattt ttcaaagcga aaaatttgca
    13861 cttttaagat tgaaaattga aaaattaagc aatctaaaat cagatttata tgagcttgaa
    13921 acgaatttag atacggttat ttttgatact tttaaagaat ttaaaatgag cgaaatttta
    13981 aactctttaa atatcaatgg agcatttttt gagtttttaa atgataaatt aaaacattat
    14041 gaaaaaaatc aaaaatcaaa attagaaagt cttgaaaaag ttttacagag tctgaaaaat
    14101 caagatgcta atattttaaa ttcttttgaa gaaaatttag aaaaaattga aaaattaaaa
    14161 caacttgaaa tggggctttt aaatgcagat taatctttta aatgatttta taaaagccta
    14221 tgaaaatacc tatagcgtga gttttgatga tagttttaaa gggcgtattc aagagctttg
    14281 caaggaactt aacgagcctt ttatgcacgc aagttatgct ttagaaaatg aattaaaaga
    14341 gcttgtgttt tctttggata agaatgttaa tatcgctatt atagggcagt tttcaagtgg
    14401 taaatcaagt ttgctaaatt tgatcttagg gcgtgattgt ttgcctacgg gtgttgttcc
    14461 tgttactttt aaacctactt ttttacgcta tgcaaaagaa tattttttaa gagtagaatt
    14521 tgaagatgga agtgatatta tcacaaatat agaaaaatta gccttttata cggatcaaag
    14581 aaatgaagta aaacaagcaa aaagtttgca tatttttgca cccattcctt tacttgaaaa
    14641 aatcactctt gtagatactc caggtttaaa tgcaaatgaa aatgatactt taacaactct
    14701 tgatgaactt aaaaatattc atggggcgat ttggttaagt ttaattgata atgcaggtaa
    14761 aaaaagtgaa gaagatgcca taaaagcaaa tttagaactt ttaggagaaa atagcatttg
    14821 tgtattaaat caaaaagata aattaagcgc agaagagcta gataatgttt taaattatgc
    14881 aaaaagtgtg tttttaaaat attttaatga gcttattgct atttcttgca aagaagctaa
    14941 agatgagcaa agctatgaaa aatctaattt tcaatctttg cttgattttt taactcagct
    15001 agatacaaca gttttaaaag aaaaatttgt taaaagaaaa attttaaatt tatgcgaaat
    15061 tttagaagat gaaaaccaac tttttgtagg tatttttgat cgtttattaa atcaatttca
    15121 aagttatgaa aagcatttac ttttagcgta tgaaaatttt ttaaaagaga ttgaaatttt
    15181 aaatcatcag attttagaac agcttaaaag cattagcgaa agaatttcta gtgaaatttt
    15241 tgcaagtgtt aaggaaaaag atgcttattt ttacaaagaa agcaaaggat ttttaaagaa
    15301 agatttatac acaagatatg attataaagc gccttatatt tcaagcgacg atgctttttt
    15361 ggcgatgttt tataatagtg atgtgatgag taaagagttt aaaaaaatca aaaatgaact
    15421 ttataaatct tttgaagaaa tcaagatgaa attaaaagat tttataaaca tacttgaaag
    15481 agaaattttg ctttttaaag cagaattttc aaacatacaa aaagatcaca ttttccaaag
    15541 tgataaaaat tttagtgaat taagagcttt ttgcaatgca agtgatgagt actttttgaa
    15601 agattttaag gagcttttat ttaaaagtat tttagagctt gatttatttt ttgaaaaatt
    15661 aaatcttaag gcttttacaa attatgaaaa tgctacgaaa ctaagccttg cattttttag
    15721 tcgtaaaatc aatgaaagtc gtgttcttta tgagcttgat agttctgaat ttgtactttt
    15781 ttatcctaaa aaaagtgaaa tttatgaaag agttttaaat gaattaaatg tttatgagtt
    15841 tgaaactttg cttattaata agcctatttt gacaaaaatt gcaaaaaatt ttttagaaca
    15901 aagtcaaaat ttaatccaag aaaaaaataa atttttagat cttaaaaaag cagagcttca
    15961 aaaaagaaga gcacagattt taaatgttag agaaagtata aaggaagatt aatgagaata
    16021 tttttaactt tatttttatt ttttaattca ttatttgcat taagtgaact agaagagggt
    16081 ttaaaacttt acgaggcaaa taaatttgat aaagcttatg aaatttttaa aagtctttgt
    16141 gaaaaagata tttctaaagc ttgtttttct ttagctttta tgcatgaaag tgctaggggt
    16201 gtgagtaagg atttaaatca agcttataaa ttttatgata aagcttgtaa attgggttta
    16261 gcaaatgcgt gttctaatat ggctttgctt ttgcaaaatc aaggttatga aaatgaagct
    16321 cttttggctt ttaataaagc ttgcacttta ggagaatcat taagttgtaa taatatagct
    16381 ttattttatg aaaaagaaaa agatggacaa atggcctcaa gtttttataa aagatcttgt
    16441 gatttaaaaa atgcaagagc ttgttatcag ttaggatctt tatatgataa aggagagctt
    16501 gttaaagcaa gtgtaaaatc tgctcttgct ttttattcta aatcttgcac tttaggtttt
    16561 ggtgaggctt gttatttgtt aggacgctat aatcaactag aaaaacaaga tctaacaaag
    16621 gcaaaaagat attttggtat ggcttgtgat caaaaacatc aagaagcttg tgcagcttat
    16681 aaagaactta attctaaaga tatagagctt tattaaaagt tctattttca ttactttcaa
    16741 agatatactt aaataaaatt aagaataaca caaaatttat cgctttttaa agttaaattt
    16801 atattaatag gactaatata gtcttgttta aattattatc aaggagaagt aatgcaagac
    16861 aatattattg atcgcagaag cttttttaaa ctagggcttc taggtggttc tgtagtagca
    16921 gctagcacta taggtggcgg tgctgtttta aaggcagcag aacttacgca ttcgcatcaa
    16981 gcttcacaag gaaaatcaaa taaaattaga ggtagaatgt tttttcaaac tcaaactgaa
    17041 tttgatacct taagtgcagc ctgtgaaaga atttatccta aagatgagca aggagaagga
    17101 gctataggtt taggcgtgcc ttattttatc gataatcagc tagctagtgc ttatggttat
    17161 aatgatagag aatatatgca agggcctttc atggagggca aagccgaaca aggctatcaa
    17221 actcctatgc aacgcaaaga tattttttta gaaggcgtgc atgctcttga agaaaatgct
    17281 caaaagcgtt ataaaaaatc tttttctttg cttaaaggtg gagatcagga taaaatttta
    17341 agcgattttg aaaaaggaaa aattcaaact acaggtttta aatcttctta ttttttcaca
    17401 cttttaagag atatgacagt agctggagtt ttagctgatc caatttatgg cggaaatgat
    17461 aataaaaatg gttggagaat gatgcaatat ccaggcgcac aaatgagcta tgtggataaa
    17521 attgcaagtg atgaattttt taacattgaa cctatgggtt tagcagatat ggagagttaa
    17581 aatggctgaa gtattaaaaa aagtagatgt agtaacagtt ggagcaggat ggactggagg
    17641 tatagtggct gcagagctta ctaaagcagg tttgaatgta cttagtttag aacgcggaca
    17701 tatgcaaagt actgaaaatt ttaattatat ccatgatgag tggagatatg ggattaatta
    17761 tggtttgatg caagattgct caaaagacac tgtgactttt cgccatgatc ctagtggttt
    17821 agccttacct tatcgtaaaa tgggttcgtt tttattgggt aataatgttg gcggtgcagg
    17881 ggtgcattgg aatggttgga cttttaggtt tatgccttat gactttgaaa ttcaaaccct
    17941 aagcaaacaa agatatggta ataaattagg taatgattat accttgcaag attggggcgt
    18001 gacttataag gatatggagc cttattatga tagatttgaa aaaacctgtg gggtatcagg
    18061 tgaaccaaat cctttagcgg aaaaaatggg agcttttaga tccagtcctt atccacaaga
    18121 acctcttgaa aatactaaaa tgcttaaacg atttgaaagt gcagcaaaaa gttcaaattt
    18181 acacacttat cgtttgccag cttcaaattc taaaggtggc tatacaaacc ctgatggtca
    18241 agatttagct ccttgtcaat actgtgcgta ttgtgagcgt tttggttgtg agtatggtgc
    18301 aaaagcaagt cctttaaaca cagtaattcc aaaggctatg agcacaggta aatacaccat
    18361 acgcacttat agtaatgtaa cgcaaattct taaaaaagac ggaaaagtaa cgggggtaaa
    18421 atttgtcgat actagaacga tgaaagagta tatccagcct gctgatatag ttgtacttac
    18481 aagttatatg tttaacaatg ctaagctttt aatggtaagc aacataggtg agcaatacga
    18541 tccaaaaaca ggtaaaggaa ctttaggtag aaattattgt taccaaatga acatgggcac
    18601 aacagctttc tttgatgagc aatttaacac ctttatgggt tcaggtgctt taggaactac
    18661 gagtgatgat tttaacggag ataattttga tcattctaag gaaaaattcc ttcatggagc
    18721 tatgatttat agcgttcagc ttggaactcg ccctatacaa tcagccccac ttccagcagg
    18781 agctccaact tggggtgccg aatttaaaaa agcattaaac tataatttca caagagctat
    18841 taccgtagga gggcaaggtg cttctttgcc tcataagaat aattatttaa gtcttgatcc
    18901 aacttataaa gatgcttttg gtatgccact tttacgctta acttataatt tcactgatca
    18961 agatagagct ttgcataaat ttatcacaga taaaacagct gaggtagcaa aaagaatgca
    19021 aggagtaaaa tcaatcaaaa aaggtgctta tcttaaggat tatagcgttg tgccttatca
    19081 atctactcat aacacaggtg gaacaaccat gggcgcagat agagaaacta gtgtggttaa
    19141 tacttattta caacactggg atgcggataa tctttttgtt gtaggagcag gaaatttcca
    19201 acataatagt ggatataatc caactgatac tgtgggagct ttggcttatc gctgtgctga
    19261 aggtatttta aaatatcata aaagtggaaa aagcttagct tgataataac ttgagagttt
    19321 ttgaaaactc tcaagattat aaatttttaa ttttcttccg atatagtata taatatcaag
    19381 gaaggcaaaa atgattaatg gtataaattc ttattcaaac tacaattata caaaaaggca
    19441 aatgtagtct gctcttggag ggtggtatgc aagatgatta ctttaagttc ttttaataga
    19501 tattttggaa ataatcctct gcagacactt actaaaatta gagatgaaag tattgaaaat
    19561 gcaaaaattt aaattataaa aaggataaaa aatgttaaat attttacatg caaattcaag
    19621 tcatcgtttc cataaatgta tgcctaagga agttcatcaa atatatgata ctttaaagct
    19681 tatggaacag caagaaggta caaaaaaaag tagaagccaa aaaagaagag caaagtaatt
    19741 ctacaaatac agataaagca gataataaaa aaataaattt ttagacatgt ccgtttagtt
    19801 ttaaaacaaa gctttattta taaggaagat tggcataatt tttttattta aattaagaat
    19861 tttaagatgc gatgctgaat ttaatgtcgt tattttgtga attttgttga taagttctag
    19921 tgacaagatt tttaaagtct ttatcaaaat ttgaattttt atcgttgttt tttgaatctt
    19981 tatctgtttt ttctaagcta ttttctgaat ttttgtcatc tttttcttta ttttcttctt
    20041 ctttttcttt ggcttcttcg gctttaagtt tcattgcttc agctcttgct tcaaattcca
    20101 tttttgtagc atttgctgca actttatagt cttgtgggct aggatcagca ggagccatag
    20161 ctgctgctgc gatttgtctt gcattggcta tagtttcttc tggtgtgttt cctttttgca
    20221 tgctgatagg aacttcgccc gctgtagcat acatttgatt atcagggcct cttgtgtaag
    20281 taaaacttgc agcacctgct aagccgccac ccgctgcttg atgtgcagct tcatgagcct
    20341 ttacatttct atcgatactt tggagttcgc gaacttgagc tacttctttt tggcttagct
    20401 ctacgccatt aaccatttgg gtttgttcgc catttttttc tttatcatct ttattttcac
    20461 taagattttt ttcatctttt tgagtggaat cagattgatt tgttttatca aaagaaggtt
    20521 tgctagagta gtaatcataa gagttataac ttgaactaat ttgcatttat ccttcttttt
    20581 gttttttaaa tttttaggaa ttttaacgca ttttgactta aaaatttgat aaattttgta
    20641 aaataatcat aaatacaatt tcaaaggaat gtaatgattt atgaaaatga tttgatttat
    20701 atagagaaag aggaggctca agtgccttgg cttaaaattt ttactaaaga aatttataaa
    20761 gaatttagcg attgtccttt agagttgcaa aaggaacttt ttgaaaaaat tttattttgt
    20821 gaaaaggcta tgatagaatt ttacaaacct gaaaaaatca atatcgcctc ttttgcaaat
    20881 tatgtgccaa gggtgcattt tcatgttatg gcaagattta aagaagatgc gttttttcca
    20941 gagtgtatgt ggggaaaaca gcaaagagaa acaata
//
LOCUS       DAPIYB010000024        20290 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.024, whole genome shotgun sequence.
ACCESSION   DAPIYB010000024 DAPIYB010000000
VERSION     DAPIYB010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20290
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.024"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(3..722)
                     /gene="kdsB"
                     /locus_tag="RJ318_000682"
     CDS             complement(3..722)
                     /gene="kdsB"
                     /locus_tag="RJ318_000682"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDV7430573.1"
                     /translation="MIIIPARLKSSRFHEKILCDIGGVPMFVATARRVSSVDEVCIAL
                     DDEKVLSIAKEYGLNAVLTSKDHESGTDRINEACKKLALKDDEIIINVQADEPFIECE
                     NLLKFKEFASFCLDKKAFMASCYKKITQEEAMDPNLVKVLCDKEGYALYFSRAKIPYE
                     RENYEESFKGHLGIYAYSVKALREFCSLSSSALERAEKLEQLRAIENGKKIKMLEIST
                     TSMGIDTKEDYERALKIYLEK"
     gene            complement(719..2131)
                     /locus_tag="RJ318_000683"
     CDS             complement(719..2131)
                     /locus_tag="RJ318_000683"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDV7430574.1"
                     /translation="MKLVESRNVNNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYA
                     NLSYKDFALKLIESFGFGEEELFKKALKSYESFDDKNTPISLQKISEKTYINELWHGP
                     TRAFKDMALQPFGVLLSEFSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKG
                     GTSGVQELQMRALDKDNLKVFAIDEDFDAAQRTLKELLFSKDFQNEIKALNYELCAAN
                     SVNFGRILFQIIYHYYASLKLFNEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIK
                     IASNANNILSEFFNQGVYDLREKSLKKTISPAMDILISSNIERLLFAKFKDKRTKELM
                     NLLKNERYFKLEKEELQSLQEDFEADFCTDEECMQFIKQSKILIDPHTATCFKMLDPL
                     KPSIITSTAEWTKFTPSMIKALYDRDSKNEKEDLKFIAKEFNVQVKDEILALFDLKNS
                     DEKVFEARNIKKEILDWMQK"
     gene            complement(2128..3054)
                     /locus_tag="RJ318_000684"
     CDS             complement(2128..3054)
                     /locus_tag="RJ318_000684"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDV7430575.1"
                     /translation="MNEEKNYELWLDNYFFKPNFWQKCLAFILLPLSVLYAFFAILNT
                     FFRKKIVFKKPVISVGNLSFGGNGKTPLCKAIAREFDGVFIVLRGYKRKSKGLFVVKN
                     QNEILCTLTQSGDEAMEYAFEENIKGVIVSEDRVKGIEKAFELGAKIVVLDDAFSKFH
                     IKKFDILLESKIKPYFNFTLPSGAYRLPKFYEKRADFIALEGRDFVRYSFVKENPKAV
                     LVTAIAKPFRLYEHFIKARACYFFKDHYEFKKEELENLLKKHNCDTLMLTFKDFVKVK
                     DFGFKCQIIELNIELKDSLREKIKTYIKEFEQ"
     gene            complement(3058..3798)
                     /locus_tag="RJ318_000685"
     CDS             complement(3058..3798)
                     /locus_tag="RJ318_000685"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HDV7430576.1"
                     /translation="MDWQKITEKMCDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCK
                     RALKENVFALLMPTQISNKANLEDALRLCADLNLEYKIIEIQSILDAFIKQSENTTLV
                     SLGNFAARIRMSLLYDYSALKNSLVIGTSNKSELLLGYGTIYGDLACAFNPIGSLYKS
                     EIYALAKYLNLHENFIKKAPSADLWENQSDEADLGFSYTKIDEGLKALETNDEKLLRT
                     LDPSLIAMLKNRMQKNAFKGKMPEILEI"
     gene            3872..4468
                     /locus_tag="RJ318_000686"
     CDS             3872..4468
                     /locus_tag="RJ318_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDV7430577.1"
                     /translation="MQIIKQACGVYETNCYILFTPKGEFIIDPGTDALLFIKKHVKNP
                     LAILNTHGHYDHIWDNAKVKKEYNIPIYIHKNDAFMLHDDFNQGYDSSDADFLVDNED
                     ILNICGVDFKFHFLPGHTPGCTMIEIVGKNIMFSGDFLFYRSIGRWDFPYSDANLMKQ
                     SLEKVMTYKEDFKLLPGHGQETTLKEEQVHLPSWLRYF"
     gene            4480..4785
                     /locus_tag="RJ318_000687"
     CDS             4480..4785
                     /locus_tag="RJ318_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430578.1"
                     /translation="MELDQILLYAFIFLNLFALFGLFLGNKKKNQFNDKKFYKICPCK
                     KMAENGSLSTICIYSAVGGFFYSVLSIGFVGFGNWTLNFIFLLALLSVFLGWKLKLD"
     gene            complement(4826..5605)
                     /locus_tag="RJ318_000688"
     CDS             complement(4826..5605)
                     /locus_tag="RJ318_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HDV7430579.1"
                     /translation="MNTEFQGKTLVISGGTRGIGKAIVYEFAKVGANIAFTYNSNAQI
                     ADEMVQDLEKNYKIKARAYEFNILEPETYKELFEKIDVDFDRVDYFISNAIISGRAVV
                     GGYTKFMKLKPKGINNIFTATVNAFVVGAQEAAKRMEKVGGGSIISISSTGNLVYIEN
                     YSGHGTAKAAVEAMARYAATELGEKNIRVNVVSGGPIETDALRAFTNYEEVKQATINL
                     SSLNRMGQPEDLAGACLFLCSSKASWVTGHTFIVDGGTTFK"
     gene            complement(5605..6501)
                     /locus_tag="RJ318_000689"
     CDS             complement(5605..6501)
                     /locus_tag="RJ318_000689"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDV7430580.1"
                     /translation="MDKNIIIGAMTALITPFKNGKVDEQSYARLIKRQIENGIDAVVP
                     VGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGAD
                     GILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCE
                     NIYGVKEASGNIDKCVDLLAHEPRMMLISGEDAINYPILSNGGKGVISVTSNLLPDMI
                     SALTHFALDENYKEAKKINDELYNINKILFCESNPIPIKTAMYLAGLIESLEFRLPLC
                     SPSKENFAKIEEVMKKYKIKGF"
     gene            complement(6494..7744)
                     /locus_tag="RJ318_000690"
     CDS             complement(6494..7744)
                     /locus_tag="RJ318_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDV7430581.1"
                     /translation="MIAYEKIQLKNKLEVYALPVNKNSDVISVDIFYKVGSRNEIMGK
                     SGIAHMLEHLNFKSTKNLKAGEFDEIVKGFGGVDNASTGFDYTHYYIKCAKKNLDKAL
                     ELFAELMANLNLKDEEFQPERAVVLEERRWRTDNNPLGYLYFRLFNHAFMYHPYHWTP
                     IGFFKDIENWSIEDIKEFHSIYYQPKNAILLVSGDIESKEVFELSKKHFEKIKNTKTI
                     PKIHTKEPKQDGVKRIYLHKNSDTELLALAYKIPNFKHKDIPALNALSELLGSGKSSL
                     MSEILIDKLNLINDYYAYVNDCIDENLFIFICNCNPNVNAEKVEKELLKIIDKLKMGK
                     ISQKDLQRVKNNVKSDFIFSLNNASAVANIYGSYLARGDINPLLNYEKDIQNLELKDL
                     ISCAKKYFIQENSTTVILRKDSNG"
     gene            complement(7741..8799)
                     /locus_tag="RJ318_000691"
     CDS             complement(7741..8799)
                     /locus_tag="RJ318_000691"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDV7430582.1"
                     /translation="MAYEMIKLLLFKLNPEHAHALVEYSLRALSASFPGALSFLAHKY
                     IVDDESLRQNLLGLDFNNPVGLAGGFDKNATMIRPLSALGFGFLEVGTFTPKPQEGNE
                     KPRLFRLVKQESIQNAMGFNNEGAEKIALRLAKTYPFVLPLGVNIGKNKITPNDKALE
                     DYFTLFRDFKDLCDYFIVNISSPNTKNLRELQNDDFLNTLLEEAKKITSKPILIKIAP
                     DMKIDDALNLCENAIKKGADGFILANTSVDYSLLDNNRTFGGISGRLITEKSGIFFKE
                     VTKILFGKTLLIASGGIDSADIAYERIKNGANLVQVYTALIFKGPSLVKNINQNLIEL
                     LRKDGFLHISEAVGVNLK"
     gene            complement(8831..10573)
                     /locus_tag="RJ318_000692"
     CDS             complement(8831..10573)
                     /locus_tag="RJ318_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7430583.1"
                     /translation="MHNEMNLKEVLIRFKPFYKRYWKQFAIAIFGMILASGGTAGSFY
                     ALEPILNYIFVEKNEALLYTVPFLLVLMYFFKNLGTYLQSFYVSFIGTDMLRVLRARV
                     LKNVLRLDMDFFKRYRSGELVSRCTNDINALQSIVSNIIPDFFRELLTAIGLLAVVLY
                     QSPTLAFFALVILPLAIFPLVWFAKKLKKYARNIQETNSDLLSYLGEIFSNIELIKAN
                     DNEKKESDKFAKHNDTLCKLNLKSARIDALTSPLMDMMGSVGVAVVIIVGGREVINGS
                     MSVGSFISFVSALFAIYTPLKRLSSLYGKLQGAVAASERTFYLLDLEPQIKGGSKELK
                     NIEKISFENVEFAYENPHKSVLKGVNFDFVKGQMLALVGTSGGGKSSIINLLMYFYEK
                     QKGKILLNQEDISTFTIESLHAKIGLVTQNIYLFNDSFAANIAYSEELEEEKVIQALK
                     LANAYEFVKEMGGIWAEVKEHGKNLSGGQKQRIAIARALYKNPDVLIFDEATSALDNE
                     SEKAIVKTIENLKQDRLILVVAHRLSTIENADKIVVLDKGKVLAIGKDEELLQTCSLY
                     QKFKSKEKTKPSFS"
     gene            complement(10566..11954)
                     /locus_tag="RJ318_000693"
     CDS             complement(10566..11954)
                     /locus_tag="RJ318_000693"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDV7430584.1"
                     /translation="MRLLDSVTKEKIKLDKKDISIYLCGPTVYDDAHLGHARSSVCFD
                     LLRRVLLAQGNRVKFARNYTDIDDKILKKMAQSGQTLEEITEFYIKSYEEDMRVLNVL
                     DPDFKPRATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS
                     RLSNEVQKRNESDFVLWKFDENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGI
                     DLLFPHHENEAAQCRCGCKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDALKEFMG
                     EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIGIKS
                     EIAKQILEILNDDLNVSKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIF
                     GFGFMDATLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLD
                     TPNGTIWEKINA"
     gene            complement(11954..13405)
                     /gene="murJ"
                     /locus_tag="RJ318_000694"
     CDS             complement(11954..13405)
                     /gene="murJ"
                     /locus_tag="RJ318_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDV7430585.1"
                     /translation="MKSLVFKNFIINALGILFSRILGLARDVLIALFLGAGLYSDIFF
                     VALKMPAFFRRIFAEGAFGQSFLPNFVKAKKKGAFCVSVMMQFSLIVFLFCLLVSFFS
                     SFFTKLFAFGFNADTIALAAPLVAINFWYLFFIFLVTFLGAILNYRQKFFITSFSAAL
                     FNLSIVIAAFFVDKNAPQNTLYYFSYATVLSGVAQLILHLLVLKNNPVIRAMTLSIKF
                     KKTKAKLQGFYGNFFHGVLGSSATQFSSLLDTTIASFLMSGSISYLYYANRVFQLPLA
                     LFAIALTQVSFPKILKHLKSDQENLALKFMQRALALLSILLIASSIVGSVFALEISKL
                     LFERGNFTHEDSVITAYVLIAYLIGLLPFGLQKLFSLWLYAKFKQKTAAWIAVKSLII
                     SALCSMAFIFLIKDESLKVIAVALSSSISAFYLLGANIKEFGFKKFFALISIKICLLV
                     IVALIVFTILLILIKPYILSFFIGIFTSFKGVF"
     gene            13509..15368
                     /locus_tag="RJ318_000695"
     CDS             13509..15368
                     /locus_tag="RJ318_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HDV7430586.1"
                     /translation="MALDEKIIAYTENPARELLSVASRTNLSLNELDFSLLAFSTQYR
                     FGDLEWEKISEKELTLFDKDEIFLKNDLQIKQEYKIEIFHGINQSKASQAVKLVANKN
                     LTKIVAQIDFTNLDFHEKLALELLQNIYKKMLKLKFLIGIRIFDFKKKLMSFCNQYKN
                     TPLNKTIQITVAQGIDPIESQDESLILTYKEKTKNYTIDEKRSGIIVVDENEVVLKHV
                     KFKQGKEGKDLNLHTLKVLAANENKVKFSCSSAFKQVEQDGYTEYIALKKGYVVQDGE
                     KFDIANELDFNGVDFKNIGIIRAGLDKNVKINIKFLSEVKDAVNSGVGIECEELNVVG
                     SVGSNTQLNATKMKIEGTTHSKAKIQAKQAYIKTHRGFAEAEILNIDLLEGGTIKAKE
                     VRIKKSLGGNIQADKIYIENLESNNSCVFFENTTIERINGDNNKFHAKIKTLDKNYDE
                     EFAILGEQISKLNHKINKIRQYILSSKNGILSVEKKITELKNQGQNVPVQYEKALKDF
                     SLQNLELNKLQNEEKELLERKKSLQLELINLQKMLFEATFINKSGKWTDMNEIKFSLL
                     EPKEDIFCSSFVNESAKFIGIKKVIQNNQESIEIHKKLDYEEKDIAWLSASKE"
     gene            15344..15895
                     /gene="ruvA"
                     /locus_tag="RJ318_000696"
     CDS             15344..15895
                     /gene="ruvA"
                     /locus_tag="RJ318_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDV7430587.1"
                     /translation="MVVGIEGIITKKEPTFIIVKCASGLSYGIFISLFCSAKIQTQEK
                     HEFFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNGVGANTAMAVCSSLDVNSFYKAL
                     SLGDESVLKKVPGIGPKSAKRIIVELSDTKTKLENVSDDKSEALAALLTLGFKQEKII
                     SVLVSAQATGTSELIKEALKKLG"
     gene            15905..16945
                     /locus_tag="RJ318_000697"
     CDS             15905..16945
                     /locus_tag="RJ318_000697"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDV7430588.1"
                     /translation="MKFAILFGGNSYEHEISIVSAVVLKKVINQNLEFIFCDEERRFY
                     HIPSEKMNSKTFSTKAYKKEKELFIKQGGFFSKGFLKENKLECECVINLIHGRDGEDG
                     KIAALFEFYSIKFIGPRLEASVLSFNKELTKLYAKSVGVKTLDYTILRKNQNSKEKLS
                     FPCIIKPARLGSSIGISIVKDEKDLEYAKDVGFEFDNDLVVEEFKNNIKEYNLAGCMI
                     NDEFVFSIIEEPKKKEFLDFEQKYLSFSGHNELIEADLSEELKEKLKDSFKKIYNPLF
                     KGALIRCDFFILDNEIYLNEINPNPGSLANYLFKDFNTTLNALADQISLEKMIKINYN
                     FLHSINGQKGKL"
     gene            17005..17220
                     /locus_tag="RJ318_000698"
     CDS             17005..17220
                     /locus_tag="RJ318_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HDV7430589.1"
                     /translation="MLSFKQDEIYTATEVVRNFSPIMEKLKKSESGKIVILKNNKFEA
                     VMLSMKEFERLQNAMQLLENIYKNQKA"
     gene            17222..17941
                     /locus_tag="RJ318_000699"
     CDS             17222..17941
                     /locus_tag="RJ318_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV7430590.1"
                     /translation="MAQTQLSYKNKTYQISYEILGDLSLPQILILHGWGADKKLMKQS
                     FCPFLKDFCQIYMDLAGFGNSSVEEILNTQDYANITELFLKQKKLNVCFFMGHSFGGK
                     VSTLLAKEKDTLILLSSAGILAKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGANL
                     SPIMYETFKKVVDEDFSEIFAKQKAKSLIFWGKSDEATPLYCGEKMHQFLKNSTFYPL
                     EGDHFFFLKHSAFIAQKIKEI"
     gene            17942..19369
                     /locus_tag="RJ318_000700"
     CDS             17942..19369
                     /locus_tag="RJ318_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDV7430591.1"
                     /translation="MLINTLYFINSLFFNFCIAFYLMSALQWYSYKFKRVFFHYHKPL
                     WHLYFLFIPYFLFLAFPLYSLVYFALIHTPILYFWNKGIDKKLVFTSKVKWFFVFVFV
                     YNAIFTILALRFSFLFNLFSLPFALLSLKIYEFFTNLYYKKQAKAKLRANENLKIILI
                     TASFGKTSIKNFLYELLKDDFKSYKTPRSVNTLLGIVADINANLSQDTQIYIAEAGAR
                     LKGDIDEITHFLQPQISIVGEIGNAHLEYFKSVENIRSTKLEALNSERLEKAFLHSST
                     QKEEDKLISLYDDKLSLIHSSLEGLEFKVDIENKSYDFKSQILGDFNAQNLCVCILCA
                     HYLGIKLEKIQKQVLNINSVEHRLQVLSREPKFIIDDGFNGNFKGMSTSYKLCKSYKG
                     RKVLVSPGIVEVSEEENIKLAKIINECFDLAIISAQINAEIFKKELKIKTIILKEKSQ
                     LVQTLAKETKHGDLILFSNDAPSFM"
     gene            complement(19427..>20290)
                     /locus_tag="RJ318_000701"
     CDS             complement(19427..>20290)
                     /locus_tag="RJ318_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430592.1"
                     /translation="ERKAENNSYTSDIKKYLGIDKYYTNIDMAETIKQYYNQFNQIVN
                     YAFNDTNKTSFTEADINSMPKGISELSSDKTIGIMPKNYDKLTITNYYNTQEQYNEAE
                     QLGMFGHINIGLQPLNFTPQSMQTQNLDKDTAIDTFNPDMSVYPQNEDGSYSKEALFM
                     SFLKSTGVSPREGSATLNPIAKSYAEAMAKESFDGSLASLDDIMTGKVDFASLLKGYA
                     QEGWLDADIYAMDKGVAWQNTSIGYGGAWFDREFNQVKANGWKASSESINSYVGSIMD
                     RLNNLMGQTRV"
BASE COUNT         7253 a         3448 c         2607 g         6982 t
ORIGIN      
        1 agttattttt ctaaataaat ttttaaagcc ctttcatagt cttctttagt atcaatcccc
       61 atgcttgttg ttgaaatttc aagcattttg atttttttac cattttctat agctcttaac
      121 tgctctaatt tttccgctct ttcaagtgca gaacttgata aagaacaaaa ctcccttaaa
      181 gctttgacac tataagcgta aatgcctaaa tgccctttaa aactttcctc gtaattttct
      241 ctttcataag ggattttagc tcttgaaaaa tacaaggcat acccttcttt atcgcaaagc
      301 actttaacca gattaggatc catagcttct tcttgagtga tttttttata acaactcgcc
      361 ataaaagctt ttttatccaa gcaaaaactt gcaaattctt taaattttaa taaattttca
      421 cattctataa aaggctcatc agcttggaca ttgataataa tctcatcatc ttttaaagct
      481 agtttcttac aagcttcatt aatcctatcc gtaccgcttt catgatcttt gcttgttaaa
      541 accgcattta gaccatattc tttagcgata cttaaaacct tttcatcgtc taaagctata
      601 caaacttcat ccacgctact tactcttctt gcagtagcca caaacatagg cactccacct
      661 atatcacata aaattttctc atgaaaacga cttgatttta atcttgcagg aataataatc
      721 atttttgcat ccaatctaaa atttcttttt ttatatttct ggcttcaaat accttttcat
      781 cgctattttt caaatcaaat aaagccaaaa tttcatcttt aacttggaca ttaaactctt
      841 tagctataaa ttttaaatct tctttttcat tcttagaatc cctatcatat aaagctttta
      901 tcatacttgg agtaaatttt gtccattctg ctgtagaagt gataatgcta ggttttaaag
      961 gatcaagcat tttaaaacaa gttgcggtat gcggatcgat taaaatcttg ctttgtttga
     1021 taaattgcat acattcttca tcggtgcaaa aatccgcctc aaaatcttct tgcaaacttt
     1081 gtaattcttc tttttcaagt ttaaaatatc tttcattttt taacaaattc atcagttctt
     1141 tagttctttt atctttaaat ttcgcaaaca aaagtctttc gatattagat gaaataagta
     1201 tatccatagc tggagaaata gtcttcttaa gacttttttc acgcaaatca taaacgcctt
     1261 gattaaaaaa ttcactcaaa atattatttg cgtttgaagc gattttgatt tttgaaattt
     1321 tagctcccat ttttttagca taaaaagctc ctaaagcatt gccaaaattt ccacttggaa
     1381 cgatgatttg tacttcttct aaaaactcat taaaaagttt taaactcgca taataatgat
     1441 aaataatctg aaataaaata cgcccaaaat ttacagaatt agctgcgcaa agctcataat
     1501 ttaaagcttt aatttcattt tgaaaatctt ttgaaaaaag caattctttt aaagtgcgtt
     1561 gcgctgcgtc aaaatcctca tctatggcaa aaactttcaa gttatcctta tctaaagctc
     1621 gcatttgcaa ctcttgaact ccacttgtgc caccttttgg atacatacaa gctactttaa
     1681 cattttttgc attttcaaaa ctttttaggg ttgcaggccc tgtatcgccg cttgtagcac
     1741 agataattaa aatattttta tcctttgaaa attcgcttaa aagcacgcca aaaggctgta
     1801 aagccatatc tttaaaagct cttgtaggcc catgccaaag ctcgttaata taggtttttt
     1861 cagagatttt ttgcaaagaa ataggtgtat ttttatcatc aaagctttcg taacttttca
     1921 aagccttttt aaaaagctct tcttcgccaa aaccaaaact ttctataagc tttaaagcaa
     1981 aatctttata agacaaattg gcatattttt ctccttcaaa aataggcaaa tttaaaggtg
     2041 agtaaagccc tccttctgga gcgtttgggt taatcaaagc ttccttaaaa cttgatacat
     2101 tatttacatt tctactctcg accaatttca ctgttcaaac tccttgatat aagtttttat
     2161 tttttctctt aatgaatctt ttaattctat atttaattct ataatttgac atttaaaacc
     2221 aaaatcttta actttaacaa aatccttaaa agtaagcatt agtgtatcgc aattatgttt
     2281 ttttagcaaa ttttctaatt cttctttttt aaactcataa tgatctttaa aaaaataaca
     2341 agcccttgcc ttgataaaat gctcatacaa tctaaaaggt ttagcaatag cagttaccaa
     2401 aacagccttt ggattttctt ttacaaaaga ataacgcaca aaatccctgc cttctaatgc
     2461 aataaaatca gccctttttt cataaaattt cggcaaacga taagctccac ttggtaaggt
     2521 aaaattaaaa taaggtttga ttttactttc aagtaaaata tcaaattttt taatatgaaa
     2581 tttagaaaaa gcatcatcaa gcacaacgat tttagctccc aattcaaaag ctttttcaat
     2641 accttttact ctatcttcgc tcacaatcac acctttgata ttttcttcaa aagcatactc
     2701 catagcttca tcgccacttt gtgttaaggt gcataaaatt tcattttgat ttttaacaac
     2761 aaacaaacct ttagactttc ttttatagcc cctaagtact ataaaaacac catcaaattc
     2821 ccttgctata gctttacaaa gcggggtttt tccattacct ccaaaactta aattaccaac
     2881 gctaataaca ggctttttaa aaactatttt tttacgaaaa aaagtattta aaatcgcaaa
     2941 aaaagcataa agcacactta aaggtaaaag tataaaagca aggcattttt gccaaaaatt
     3001 gggcttaaaa aaataattat caagccaaag ttcataattt ttttcttcat tcattgttta
     3061 aatttccaaa atttcaggca tttttccctt aaaagcattt ttttgcatgc gattttttaa
     3121 catagcaatc aaagaaggat caagtgttct taaaagtttt tcatcattag tttctaaagc
     3181 ttttaaacct tcatcgattt ttgtataaga aaaacctaaa tccgcctcat cactttgatt
     3241 ttcccaaaga tccgcacttg gagctttttt gatgaaattt tcatgcaagt taaggtattt
     3301 tgctaaggca taaatttcac ttttataaag cgatcctata ggattaaaag cacaagctaa
     3361 atccccataa atcgtaccat aacctaaaag caattcgctt ttattagaag tgcctatgac
     3421 taaagaattt ttcaaagcag aataatcata aagcaaactc attctaatac gcgctgcaaa
     3481 atttcccaaa gatactagag tggtattttc actttgcttt ataaaagcat ctaaaatgct
     3541 ttgaatttct atgattttat attcaagatt taaatccgca caaagcctta aagcatcttc
     3601 aagattggct ttgtttgaaa tttgagttgg cattaaaaga gcaaaaacat tctcttttaa
     3661 agctctttta caaagcgttg ctactaaagc agaatcaatc ccgccactaa gccccaaaac
     3721 cacaccttga ctttgagaat ttttcacttt ttcttgtata aaatcacaca ttttttccgt
     3781 aatcttttgc caatccataa agcttgcctt ttaaaaattt aatgtataat tatatttatt
     3841 taaggcaaat tttttattaa agaggcaaaa aatgcaaatt atcaaacaag cttgtggagt
     3901 ttatgaaact aattgctata ttttatttac cccaaagggt gaatttatca ttgatccagg
     3961 aactgatgca cttttattta tcaaaaaaca tgtaaaaaat cctttggcga ttttaaatac
     4021 tcacgggcat tatgatcata tttgggataa tgccaaggtt aaaaaagaat acaacatccc
     4081 tatttatatt cataaaaatg atgcttttat gctacatgat gattttaatc aaggctatga
     4141 ttctagcgat gcggattttt tagtagataa tgaagatatt ttaaatattt gcggagttga
     4201 ttttaaattt cactttttac caggacacac accaggttgc actatgatag aaattgtagg
     4261 taaaaatatc atgtttagtg gagatttttt attttataga agcataggaa gatgggattt
     4321 tccttattca gatgcaaatt taatgaaaca aagcttagaa aaagttatga cttacaaaga
     4381 agattttaaa cttttaccag gacatggaca agagactact ttaaaagaag agcaagtcca
     4441 tctaccctct tggcttagat acttttaagg tatattaaaa tggaattaga tcaaatttta
     4501 ttatatgctt ttattttttt aaatcttttt gccctttttg gtttattttt aggaaataaa
     4561 aagaaaaatc aatttaacga taaaaaattt tataaaatct gcccatgtaa aaaaatggca
     4621 gaaaatggat ctttaagtac gatttgtatt tattcagctg tgggaggatt tttttacagc
     4681 gtattatcta taggttttgt aggttttggt aattggactt taaattttat ttttttactt
     4741 gcattattaa gtgttttttt agggtggaaa ttaaaacttg attgaaaaat atttttaaga
     4801 aaaatccatt gatttttctt aatttttatt taaaagttgt accaccatca acgatgaaag
     4861 tatgtcctgt aacccaactt gccttacttg aacaaagaaa aagacatgct ccagccaaat
     4921 cttcaggctg ccccatgcga tttaaagagc ttaaatttat agtagcctgt tttacttctt
     4981 cataatttgt aaaagctctt aaagcatcag tttcaatagg cccaccactt acgacattta
     5041 cacggatatt tttttctcca agttcagtag ccgcatatct tgccatagct tctacagcgg
     5101 cttttgctgt accgtgacct gaataatttt ctatatacac taaatttcct gtagatgaga
     5161 tagaaataat gcttccaccc cctacttttt ccatcctttt agctgcttct tgtgcgccca
     5221 caacaaaagc atttactgtg gctgtaaaaa tgttattaat tccctttggt tttaacttca
     5281 taaatttggt atagccacct acaaccgcac gtcctgaaat gatagcattt gagataaaat
     5341 aatccactct atcaaaatcc acatcaattt tttcaaaaag ttctttatag gtttcaggtt
     5401 ctaagatatt aaattcataa gctctagctt tgattttata atttttctcc aaatcttgaa
     5461 ccatttcatc agcaatttgc gcattagaat tataagtaaa agctatattt gcacccactt
     5521 tagcaaattc ataaactata gctttgccta tcccgcgagt tccaccgcta atcactaaag
     5581 tttttccttg aaattctgta ttcattaaaa tcctttgatc ttatattttt tcatcacttc
     5641 ttcaatttta gcaaaatttt ccttacttgg agaacaaaga ggaagtctaa attccaaact
     5701 ttctatcaat ccagctaaat acatagccgt tttaatagga ataggattac tttcgcaaaa
     5761 taaaatttta ttgatattat aaagctcatc attgattttt ttagcttctt tataattttc
     5821 atctaaagca aaatgagtta aagcgctaat catatcgggt aataaatttg aagttactga
     5881 aatcactccc tttccaccat ttgaaagtat aggataattg atcgcatctt cccctgaaat
     5941 aagcatcatt ctaggttcgt gtgcaagcaa atccacacac ttatcgatat ttccactcgc
     6001 ttcttttact ccataaatat tttcacaatc tctaaaaagc ttgataatag tatccgttga
     6061 aatttcacaa cctgttcttc ctggaacatt atataaaagc acaggaatat ctacactttg
     6121 cgcaatagcc ttataatgct cgtaaagtcc ttgttgcgta ggtttattat aatacggtgc
     6181 cacacttaaa atcccatcag caccatgctc tttagcaaat ttagccaaac ccactgcctc
     6241 atgagttgca ttacttcccg cacctgctaa aaccttaact ttagttcctt tacaagtctc
     6301 aacggctatt tctatgcaag ttctatgttc ttcatgggtt aaagttgcac tttctcctgt
     6361 tgttcctact ggaactactg catcgatgcc attttctatt tgtcttttaa tcaatcttgc
     6421 ataactttgc tcatcaactt ttccattttt aaatggtgta ataagagccg tcatcgcccc
     6481 aatgataata tttttatcca tttgaatcct ttcttagaat taccgtagtt gaattttctt
     6541 gaataaaata ttttttagca caagaaatca aatcttttaa ttccaaattt tgtatatctt
     6601 tctcataatt taacaaagga ttgatatctc ctcttgctag atatgaacca taaatatttg
     6661 ccactgcact agcattgtta agtgagaaaa taaaatcact tttgacatta tttttcactc
     6721 tttgcaaatc tttttgagaa attttaccca ttttaagttt atcaatgatt tttaaaagct
     6781 ctttttctac tttttctgca ttaacattgg ggttacaatt acaaataaaa ataaataaat
     6841 tttcatctat acaatcatta acataagcat aataatcatt gattaaattt aatttatcaa
     6901 tcaaaatttc actcattaaa gaacttttcc cacttcctaa aagctcggat aaagcattta
     6961 aagcaggtat atctttgtgc ttgaaatttg gaattttata agcaagggct aatagttcag
     7021 tatctgagtt tttatgtaaa tatattcttt ttactccatc ttgcttaggc tcttttgtgt
     7081 gaattttagg tatagtctta gtatttttaa tcttttcaaa atgttttttt gaaagctcaa
     7141 aaacttcctt actttctata tcgccactta caagtaaaat cgcattttta ggttgataat
     7201 aaatactgtg aaattcttta atatcttcaa tactccaatt ttctatatcc ttaaaaaaac
     7261 ctataggagt ccaatgataa ggatgataca taaatgcatg attaaaaagc ctaaaataaa
     7321 gatatcctaa agggttatta tctgttctcc atctacgctc ttctaaaacc actgctcttt
     7381 caggctgaaa ttcttcatct tttaaattta aattcgccat aagttctgca aaaagctcta
     7441 aagctttatc taaatttttc ttcgcacatt taatataata atgagtatag tcaaaacctg
     7501 tgcttgcatt atccacacca ccaaaaccct taacaatctc atcaaattcg ccagctttta
     7561 aatttttagt acttttaaaa tttaaatgtt ctaacatatg agctatgcca ctttttccca
     7621 tgatctcatt tcttgaaccc actttataaa aaatatcaac gctaatcaca tcgctatttt
     7681 tatttacagg caaagcataa acttcaagct tgttttttaa ttgaattttt tcataagcaa
     7741 tcattttaaa tttaccccaa cagcttcgct aatgtgtaaa aaaccatctt ttcttaaaag
     7801 ctctataaga ttttgattga tattttttac caaagaagga cctttaaaaa tcaaagctgt
     7861 ataaacttgc accaaattag ccccattttt aatacgctca taagcaatat cagcactatc
     7921 aatccctcca cttgcaataa gcaaggtttt gccaaaaaga attttagtta cttctttgaa
     7981 aaaaatacca cttttttccg taatcagtct tccactaata ccaccaaaag tacgattatt
     8041 atctaataaa ctataatcaa cactagtatt ggctaatata aacccatctg cacctttttt
     8101 aatggcattt tcacataaat ttaaagcatc atctattttc atatcaggag caatttttat
     8161 caaaataggc ttagaagtga tttttttggc ttcttcaagc aaggtattta aaaaatcatc
     8221 attttgcaac tctcttaaat ttttagtatt aggagatgag atattaacga taaaataatc
     8281 acacaaatcc ttaaaatctc taaacaaagt aaaataatcc tccaaggctt tatcatttgg
     8341 agtgatttta tttttcccta tatttacccc taaaggcaaa acaaaaggat aggtttttgc
     8401 aagtcttaaa gcaatctttt cagcaccttc gttgttaaaa cccatagcat tttgtatact
     8461 ttcttgtttt acaagtctaa atagacgtgg cttttcattg ccttcttgag gttttggagt
     8521 aaaagttccc acttctaaaa agccaaatcc taaagcactc aaaggtctta tcatagtggc
     8581 atttttatca aagcctcctg ctaaacctac aggattatta aaatcaagtc caagtaaatt
     8641 ttgccttaaa ctctcatcat caactatata tttgtgtgct aaaaaactta aagctcctgg
     8701 aaaactggca cttaaagccc ttaagctata ttcaaccaaa gcatgtgcat gctcagggtt
     8761 taacttaaaa agtaaaagtt ttatcatttc ataagccatt ttttaatcct ttttgaaatt
     8821 ctaactaaaa ttaactaaag ctgggctttg ttttttcttt gcttttaaat ttttgataca
     8881 aagaacaagt ttgcaaaagc tcttcatctt tacctattgc caatacctta cccttatcca
     8941 atactactat tttatccgca ttttctatag tgcttaaacg atgtgcaacc actaaaatca
     9001 atctatcttg ttttaaattt tctatagttt taactattgc tttttcactt tcattatcca
     9061 aagctgaagt tgcttcatca aaaataagca catcaggatt tttatataaa gctctagcga
     9121 ttgctattct ttgtttttgc cctccactta agttcttacc atgttctttc acttcagccc
     9181 aaatcccgcc catttcttta acaaattcat aagcattggc caattttaaa gcttggatga
     9241 ctttttcttc ttctaactct tcgctataag caatatttgc agcaaaacta tcattaaaaa
     9301 gataaatatt ttgcgttaca agtcctattt tagcatgtaa gctttctatg gtaaaagtgc
     9361 taatatcttc ttgattgagt aaaattttac ctttttgctt ttcataaaaa tacatcaaaa
     9421 gattaataat agaagattta ccacccccac ttgtccctac aagagcaagc atttgccctt
     9481 taacaaaatc aaaatttacg ccttttaaaa cacttttatg cgggttttca taagcaaatt
     9541 caacattttc aaagctaatt ttttcaatgt tttttaattc tttgcttcca cctttaattt
     9601 gaggttctaa atccaataaa taaaaagttc tttcacttgc cgcaacagca ccttgaagtt
     9661 ttccatataa agacgaaaga cgctttaaag gagtatatat cgcaaaaagt gccgaaacaa
     9721 aactgataaa acttcccaca ctcatagaac cattgataac ctctctaccc cctacaataa
     9781 tcaccacagc aaccccaaca gaacccatca tatccattaa aggacttgta agtgcatcaa
     9841 tacgtgcgga ttttaggttt aatttacata aagtatcatt atgcttagca aatttatcac
     9901 tttctttttt ttcattatca ttagctttga tcaattcaat atttgaaaaa atttcaccca
     9961 aataagaaag taaatccgaa tttgtttctt gtatatttct tgcatatttt ttaagttttt
    10021 tagcaaacca taccaaagga aaaatagcta aaggcaaaat cactaaagca aaaaaagcca
    10081 aagtaggact ttgatacaag actaccgcaa gcagtcctat agcagttaaa agctctctaa
    10141 aaaaatcagg aataatgttt gatactatgc tttgaagtgc attaatatca ttagtacaac
    10201 gacttacaag ctctccgctt ctatagcgtt taaaaaaatc catatccaag cgtaaaacat
    10261 tttttaaaac cctagcacgc aatactctta acatatctgt tcctataaag gaaacataaa
    10321 aactttgtaa ataagttcca agatttttaa aaaaatacat caatactagc aaaaaaggta
    10381 ctgtataaag taaagcttca tttttttcaa cgaaaatata atttaaaata ggctctaaag
    10441 cataaaaact tccagcagtt cctccgcttg ctaaaatcat accaaaaata gctatagcaa
    10501 attgtttcca atatctttta taaaagggct taaagcgtat taaaacctct tttaaattca
    10561 tctcattatg catttatttt ctcccaaatt gttccatttg gagtatctaa aagagtgatt
    10621 tttttactat ttaattgctc tcttattgca tcagctgtgt taaaatcttt gtttttctta
    10681 gcctcagttc tttctaaaat taacttttca atctcttctc gttcttcttt gcttacaccc
    10741 cattgaaaat ataaagttgc atccataaaa ccaaagccaa aaattttagc tagctcactt
    10801 aaagcttctt tgatattttg ttttaaaatt ttatttttgc tttctttatc caactctaaa
    10861 tttgcactac tgataaaatc atccaaaaga gctaaggctt tagaaacatt taaatcatca
    10921 tttaaaatct ctaaaatttg cttagcaatt tcgcttttta ttccaatatc atttaaaaca
    10981 tcaaaatcag aaatttcacc taaatccaat ctttttttaa ggcgataaaa tttatctaaa
    11041 cgttttttag cattttctaa atccgataaa gaataattaa aatgagatct ataatgagaa
    11101 ctcaaaagat aaaatcttaa agcctcgccc ataaattctt ttaaagcatc ttttataaaa
    11161 aaactattat ttaaactttt actcattttt tcgccatcga tttttacaaa accattgtga
    11221 agccaaatat ttgctaattt tctcttacat ccacaacgac attgcgcagc ttcattttca
    11281 tgatgaggaa aaagcaaatc tatccctcca gcatgtatat caagggtatt ttcaaaaata
    11341 gaatcaatca tagcaacaca ttcagtatgc caacctggac gccctttgcc aaattcactt
    11401 tcgtaaaaat tttcatcaaa tttccaaagc acaaaatcgc tttcatttct tttttgcact
    11461 tcattactta gacgagagat attttcttct aaattgcgat ttgataggct taaatatttt
    11521 tcatctttac ttgtatcaaa ataaattcca tcttctagag tataaacaaa cccatcctta
    11581 gcaagctttt taatcaaatc aagcatagct gttatataat gcgttgcacg aggtttaaaa
    11641 tcaggatcta atacatttaa aaccctcata tcctcttcat aacttttgat ataaaattcc
    11701 gtaatttcct ctaaagtttg accactttga gccatttttt tcaaaatctt atcatcaata
    11761 tctgtataat ttctagcaaa ttttacccta ttgccttgag caagtaaaac cctacgcaaa
    11821 agatcaaaac aaacactact tcttgcatgt cctaaatgtg catcatcata aaccgtaggt
    11881 ccgcataaat aaatactaat atctttttta tcaagtttta ttttctcttt tgttacacta
    11941 tctaataatc tcattaaaaa actcctttaa aacttgtaaa aattcctata aaaaaactta
    12001 aaatataagg tttaatcaaa ataagtaaga tcgtaaaaac aatcaaagca actataacca
    12061 ataagcaaat tttaatagat attaaagcaa aaaatttctt aaaaccaaat tctttgatat
    12121 tagctccaag caaataaaaa gcactaatag agcttgaaag tgctactgca ataaccttta
    12181 aactttcatc tttaatcaaa aatataaaag ccatagaaca taaagcactg ataattaaag
    12241 attttaccgc gatccaagct gctgtttttt gtttaaattt tgcataaagc cacaaagaaa
    12301 aaagcttttg caaaccaaaa ggtaaaagcc ctataagata agcaatcaaa acataagccg
    12361 taatcacact atcttcgtga gtgaaatttc ctctttcaaa taaaagcttt gaaatttcca
    12421 aagcaaacac agaacctaca atactagaag caataagcaa aatgcttaaa agcgctaatg
    12481 ctctttgcat aaattttaag gctaaatttt cttgatcact ttttaaatgt tttaaaattt
    12541 ttggaaaaga aacttgagtt aaagcaatag caaaaagtgc cagggggagt tggaagacac
    12601 gatttgcata ataaagataa gaaatactcc cgctcattaa aaaactagct atagttgtat
    12661 caagcaatga gctaaattga gtcgcagaag aacctaaaac tccatgaaaa aaattgccat
    12721 aaaaaccttg taatttcgcc ttggtttttt taaattttat acttaaagtc atagcacgta
    12781 ttacaggatt gttttttaaa acaagcaaat gtaaaataag ctgtgccacc ccacttaaaa
    12841 ccgttgcata agaaaaataa taaagtgtat tttgcggtgc atttttatcc acaaaaaagg
    12901 cagctataac aatacttaag ttaaataatg ccgcagaaaa agaggtaatg aaaaattttt
    12961 gtctataatt taaaatagct cctaaaaaag taactaaaaa aataaaaaac aaataccaaa
    13021 aattaatcgc caccaaagga gccgctaaag ctatagtatc tgcgttaaac ccaaaagcaa
    13081 aaagcttagt aaaaaaagag gaaaaaaaac ttaccaaaag acaaaataaa aaaactataa
    13141 ggctaaattg catcattaca ctaacgcaaa aagctccctt ttttttcgct tttacaaaat
    13201 taggcaaaaa actttgtcca aaagcccctt ctgcaaaaat tcttctaaaa aaagcaggca
    13261 tttttaaagc cacaaaaaaa atatcactat aaagccctgc tcctaaaaaa agcgctatta
    13321 aaacatctct agcaagccct aaaattcttg aaaataaaat tcctaaagca ttgataataa
    13381 aatttttaaa tactaaactc ttcattaaat tttttcataa atttcaaaat ataaagagaa
    13441 ctattttaac taaaattgat taaaaattga ctataattac attcttaatt ttttacaagg
    13501 ggaaagtttt ggctttggat gaaaaaatta ttgcctatac agaaaatcca gctcgagagc
    13561 ttttaagcgt agcttcacga acaaacctta gcttaaatga gcttgatttt agtttattgg
    13621 cattttctac acaatatcgt tttggagatt tagaatggga aaaaatctct gaaaaagaat
    13681 taactctttt tgataaagat gaaatttttt taaaaaatga tcttcaaatc aagcaagaat
    13741 acaaaataga aattttccac ggtataaacc aaagcaaagc atctcaagca gtcaaactag
    13801 ttgcaaataa aaatttaacc aaaatagttg ctcaaattga ttttacaaat ttagactttc
    13861 atgaaaaact agcactagaa cttttgcaaa atatttataa aaagatgttg aaacttaaat
    13921 ttttaatagg tatccgcatt tttgatttta agaaaaaatt aatgtctttt tgcaaccaat
    13981 ataaaaacac ccctttaaat aaaactatac aaatcaccgt tgcacaaggt attgatccta
    14041 tagaaagtca agatgaatct ctgatcttga cttataaaga aaaaaccaaa aactacacta
    14101 tcgatgaaaa acgctcaggt attattgttg ttgatgaaaa tgaagttgtt ttaaaacacg
    14161 tcaaatttaa acaaggtaaa gaaggaaaag acttaaattt acacacctta aaagttttag
    14221 ctgcaaatga aaataaagtt aaattttctt gttcttcggc ttttaaacaa gtagagcaag
    14281 atggatacac agaatatata gccttaaaaa aaggttatgt agtacaagat ggtgaaaaat
    14341 ttgatatcgc caatgaacta gattttaatg gggtagattt taaaaatata gggattataa
    14401 gagctggact agacaaaaat gtcaaaatca atataaaatt tctttcagaa gtaaaagatg
    14461 ctgtaaattc tggcgttggg atagaatgtg aagaattaaa tgtagtcgga agcgtaggaa
    14521 gcaacactca acttaatgcc accaaaatga aaattgaagg cactacgcac tctaaagcca
    14581 aaattcaagc caaacaagcc tatataaaaa ctcatagagg atttgcggaa gccgaaattt
    14641 taaatataga tttgctcgaa ggtggaacaa tcaaagccaa agaagtgaga attaaaaaaa
    14701 gtttaggcgg aaatatacaa gctgataaaa tctatataga aaatttagaa agtaataatt
    14761 cttgtgtgtt ttttgaaaac accacaatag aacgcattaa cggggataac aataaatttc
    14821 atgctaaaat taaaactctt gataaaaatt atgatgaaga atttgcgatt ttaggagagc
    14881 aaatttctaa gttaaatcat aaaataaata aaataagaca atacatttta tcaagcaaaa
    14941 atggaatttt aagcgttgaa aaaaagataa cagaacttaa aaatcaaggt caaaatgttc
    15001 ctgtacaata cgaaaaagcc ctaaaagatt tctctttaca aaatcttgaa ttaaataaac
    15061 tacaaaatga agaaaaagaa cttcttgaac gcaaaaaatc tttgcaatta gaattaatca
    15121 atttgcaaaa aatgcttttt gaagcaactt ttataaataa aagcggcaaa tggactgata
    15181 tgaatgaaat caaattttca cttctagagc ctaaagaaga tattttttgc tcttcatttg
    15241 ttaatgaaag tgctaaattt ataggcatta aaaaagtcat acaaaacaac caagaaagta
    15301 tagaaataca taaaaaatta gattatgaag aaaaggatat agcatggttg tcggcatcga
    15361 aggaataatc acaaaaaaag aacctacttt tatcattgtt aaatgtgcta gtggtttaag
    15421 ctatgggata tttatttctc ttttttgttc tgctaaaatt caaactcaag aaaagcatga
    15481 gttttttatc actcaaatca tcaaagaaga ttctaataaa ttttatggct tcttggataa
    15541 agatgaacaa aaaatgtttg aaatgctttt aaaagtcaat ggagtgggtg caaatactgc
    15601 tatggcggta tgctctagtc ttgatgtaaa ttctttttac aaagcgttaa gtttgggcga
    15661 tgaaagcgtg cttaaaaaag tacctggcat aggtccaaaa agtgcaaaac gcattatagt
    15721 agaactttct gacacaaaaa ccaaacttga aaatgtaagc gatgataaaa gcgaagcctt
    15781 agccgcactt cttactctag gctttaaaca agaaaaaatc ataagtgttt tagtaagtgc
    15841 tcaagcaaca ggcacaagcg aactcatcaa agaagctctt aaaaaactag gataaaggaa
    15901 taaaatgaaa tttgcaatac tttttggcgg aaattcttat gaacatgaga ttagtatagt
    15961 aagtgctgta gtgcttaaaa aagttatcaa tcaaaattta gaatttattt tttgtgatga
    16021 agaaagaaga ttttatcata tcccaagtga aaaaatgaat tctaaaactt ttagcaccaa
    16081 agcttataaa aaagaaaaag aactcttcat caaacaagga ggttttttta gcaaaggctt
    16141 tttaaaagaa aataaactag agtgcgaatg cgtgatcaat cttatccatg gtagagatgg
    16201 agaagatgga aaaattgcgg ctttatttga gttttattct attaaattta taggacctag
    16261 gcttgaagct agtgtattat cttttaacaa agaacttacc aaactttatg ccaaaagcgt
    16321 tggagtaaaa acacttgatt ataccatact aagaaaaaat caaaactcta aagaaaagct
    16381 tagttttcct tgcattatca aacctgcaag acttggaagt agtataggta ttagtatagt
    16441 aaaagatgaa aaagatttag aatacgccaa agatgtaggt tttgaatttg acaatgatct
    16501 tgtagtagaa gaatttaaaa acaatatcaa agaatacaat cttgcaggat gtatgatcaa
    16561 tgatgagttt gttttttcca ttatagaaga gccaaagaaa aaagaatttt tagactttga
    16621 acaaaaatat cttagctttt caggacacaa tgaacttata gaagcagatt taagcgaaga
    16681 attaaaagaa aaactcaaag atagctttaa aaagatctac aatcctttgt ttaaaggtgc
    16741 tttaatacgc tgtgattttt ttatactgga taatgaaata tatttaaatg aaatcaaccc
    16801 aaaccctggt tctttggcta attatctttt taaagatttt aataccactt taaacgcttt
    16861 agctgatcaa atttcacttg aaaaaatgat aaaaatcaat tacaacttcc ttcactccat
    16921 taacggacaa aaaggaaaat tataagcttt taagtcaaaa tgcgctaaat tatacataaa
    16981 atttagcgta ttttaggaag aaaaatgctc tcttttaaac aagatgaaat ttacactgcc
    17041 accgaagtgg taagaaattt tagccccatt atggaaaaac tcaaaaaaag cgaaagtgga
    17101 aaaatagtta ttttaaaaaa taacaaattt gaagctgtaa tgcttagtat gaaagaattt
    17161 gaacgcttac aaaatgccat gcaactttta gaaaatatct acaaaaatca aaaggcttaa
    17221 aatggctcaa actcaacttt cttataaaaa caaaacttat caaatttctt atgaaatttt
    17281 aggtgatctt tccttaccgc aaatacttat cttacacggc tggggagctg ataaaaaact
    17341 tatgaaacaa agtttttgtc cttttttgaa agatttttgt caaatttata tggatttagc
    17401 aggttttgga aattcaagcg tggaagaaat tttaaacact caagattatg ccaatatcac
    17461 agaacttttt ttaaaacaaa aaaaactcaa tgtctgtttt ttcatggggc attcttttgg
    17521 tggaaaagta agtaccctac tcgcaaaaga aaaagacacc ctaatcttac tttcaagtgc
    17581 aggaattttg gctaaaaaat ccctaaaagt gcgttttaaa atccgtattt ttaaaatttt
    17641 aaaactcttt ggtttgggaa aattttatcg ctattttgct agtaaagatg gagcaaatct
    17701 tagtcctata atgtatgaaa cctttaaaaa ggttgttgat gaggatttta gtgaaatttt
    17761 tgccaagcaa aaggctaaaa gcttgatttt ttggggaaaa agcgatgaag ctacgccttt
    17821 gtattgtggt gaaaaaatgc atcaattttt aaaaaatagt actttttatc ctttagaggg
    17881 ggatcatttt ttctttttaa aacactctgc tttcatagct caaaaaatca aggaaattta
    17941 aatgcttatc aatactcttt attttatcaa ttctttattt tttaattttt gtatagcttt
    18001 ttatcttatg agtgctttac aatggtattc ttataaattt aaacgcgtgt tttttcatta
    18061 tcataaacct ttgtggcatt tgtatttttt atttattcct tattttttat tcttagcttt
    18121 tcctttatac tctttggtat attttgcatt gatccatact ccgattttgt atttttggaa
    18181 taaaggcata gataaaaagc ttgtttttac aagtaaggtt aaatggtttt ttgtttttgt
    18241 ttttgtttat aatgctattt ttaccatcct tgctttgcgt ttttcttttc tttttaatct
    18301 ttttagtctt ccttttgctt tattgagtct taaaatttat gagtttttta caaatttata
    18361 ttataaaaaa caagccaaag ccaaactaag agccaatgaa aatttaaaaa tcatactcat
    18421 taccgcaagt tttggaaaaa caagtattaa aaatttttta tacgaacttt taaaagatga
    18481 ctttaaaagc tacaaaacac cacgctctgt caatacctta ctaggtatag ttgctgatat
    18541 caatgctaat ttaagtcaag atactcaaat ttacatagct gaagcaggcg ctagacttaa
    18601 aggcgatatc gatgaaatca cgcatttttt acaacctcaa atcagcatag taggagagat
    18661 aggcaatgca catttagagt attttaaaag tgttgaaaat atccgctcaa ccaaacttga
    18721 agccttaaat tccgaaagac tagaaaaggc ttttttacac tctagcaccc aaaaagaaga
    18781 agataaactc atcagccttt atgatgataa attaagtctt attcattcaa gtcttgaagg
    18841 tttagaattt aaagtcgata tagaaaataa atcctatgat tttaaaagtc aaattttagg
    18901 ggattttaat gcgcaaaatc tttgtgtttg tatactttgt gctcattatc ttggcataaa
    18961 actagaaaaa attcaaaagc aagttttaaa tataaattcc gtagaacatc gcttgcaagt
    19021 gctttcaaga gagcctaaat ttatcataga tgatggtttt aatggaaatt ttaaaggtat
    19081 gagcacaagc tataaacttt gtaaaagcta taaaggacgc aaagttttag taagtcctgg
    19141 tatagtagaa gtaagcgaag aagaaaatat aaaacttgcc aaaatcatca atgagtgttt
    19201 tgatcttgct atcattagtg cacaaatcaa tgctgaaatt ttcaaaaaag agttaaaaat
    19261 aaaaaccatt atacttaaag aaaagagtca actagttcaa actctagcta aagaaacaaa
    19321 acacggagat ttgatactct tttcaaacga tgcacctagc tttatgtgat tcgcataagt
    19381 atttgcaaat gtcatcattt ttaatttgac ttcgtgcaaa tacttcctaa accctagttt
    19441 gccccataag attatttaat ctatccatta tagatccaac ataagaattg atactttcac
    19501 tgcttgcttt ccaaccatta gcttttactt gattaaattc tctatcaaac caagctccac
    19561 cataacctat gcttgtattt tgccaagcaa cccctttatc cattgcatat atatctgcat
    19621 caagccaacc ctcttgtgca tagcctttta acaaacttgc aaaatcaact ttacctgtca
    19681 taatgtcatc taaagaagct aaagagccat caaagctttc tttagccata gcttcagcat
    19741 aagacttagc tataggattt aatgttgcac taccttctct tggcgataca cccgttgatt
    19801 ttaaaaaact cataaacaaa gcttctttag aataacttcc atcttcattt tgtggataaa
    19861 ctgacatatc aggattaaaa gtatctattg cagtgtcttt atctaaattt tgagtttgca
    19921 tactttgcgg agtgaaattt aatggttgta agcctatatt aatatgtcca aacattccta
    19981 attgttctgc ttcattatat tgctcttgtg tattataata gtttgttatt gttagcttgt
    20041 cataattttt cggcataata cctatagttt tatcagatga taattcacta attcccttag
    20101 gcatagaatt tatatctgct tcagtgaaac ttgttttatt ggtatcatta aaagcataat
    20161 taacaatttg attaaattga ttataatatt gttttatggt ttcagccata tctatgtttg
    20221 tataatattt atctatacct aaatattttt ttatatctga agtataagag ttattttcag
    20281 ccttcctctc
//
LOCUS       DAPIYB010000025        19310 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.025, whole genome shotgun sequence.
ACCESSION   DAPIYB010000025 DAPIYB010000000
VERSION     DAPIYB010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19310
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.025"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            6..761
                     /locus_tag="RJ318_000702"
     CDS             6..761
                     /locus_tag="RJ318_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7430593.1"
                     /translation="MKKILSIALVALVGLFLGACSDSKNKESNASVELKVGTAPNYKP
                     FNYKENSKLTGFDTDLVEEIAKKNGIKIVWVETNFDGLIPALKAGKIDMIASAMSATD
                     ERRQSVDFTKPYYMSKNLYLKLKNNDSLQTKNDLEGKKIGVQLGTLQENTAKAIKNAQ
                     VQSNKDLNIAVLALKNNKIDAIVADQDTAKGFLAENPELVSFYQETDGGEGFSFAFDK
                     NKQKNIIEIFNKGIDEAKTDGFYDTLIKKYELE"
     gene            complement(785..1423)
                     /locus_tag="RJ318_000703"
     CDS             complement(785..1423)
                     /locus_tag="RJ318_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDV7430594.1"
                     /translation="MKLVLFDLDDTLIQGDSAKLWLKFCVEKGFLPQEYLEKIVFYQK
                     QYQEKKFDMDEFMTFFLQSVKGKNEDGISSLVDEFIKIYIKPYEKAKELIIKYQDQRC
                     IIISATAEFLVRKIASFLGVRESIAIKCERVGDKFSGKAYGIYSFKEGKVLRLKEYLG
                     KDYEKWMKDSYFFSDSINDLPLLESVSKAFVCNGDEKILKIAKERKYEILTF"
     gene            complement(1420..2409)
                     /locus_tag="RJ318_000704"
     CDS             complement(1420..2409)
                     /locus_tag="RJ318_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7430595.1"
                     /translation="MAYLKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKST
                     LLRCIAGLSQINGGKISLNDKDLTKLSPQKRNIGMVFQNYALFPNLNVFENVAFGLKI
                     KKMDKKDIEKRVKKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVIKPDLLLLDEP
                     LSALDAKIRKYLRVQIKEIQKELELTTIFVTHDQEEALELSDTIILMNEGKIIQNSNA
                     NNLYLLPESHFVASFIGNYNILSPKELDSLGLKHDFKKDIALRPETIEISNEGLEAKI
                     KEKSLLGNIIRYRVRVQEIEFKVDTLNFSTHSTYEAGDKIALKFNLSLAKELK"
     gene            complement(2413..3192)
                     /locus_tag="RJ318_000705"
     CDS             complement(2413..3192)
                     /locus_tag="RJ318_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7430596.1"
                     /translation="MNENLSLKAKIYHYAVLFLVFLFLALPLMATFLYSISTSWGVSV
                     LPDDLTLKWYQELFHDERFLLALWHSLLVCVGSILLSVILVFPLVFVLNYYFLKLKAF
                     VNILIIMPFAVPPIVSCVGLLQLYADNIGGTAWILIFTYFTIALPFIYRALDNAISNV
                     NLNELITSNAMLGGSLMGAIFKLILPNLRNGILVAVFLSFSFLIGEFLYANILVGSAY
                     ETLQVYLYNIKNQSGHYSSALVIVYFVLIFITTFIASLIKE"
     gene            complement(3193..4032)
                     /locus_tag="RJ318_000706"
     CDS             complement(3193..4032)
                     /locus_tag="RJ318_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7430597.1"
                     /translation="MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSL
                     ANFIHIFESKFYLQSIINSLQISFISSIFGLLIGLLASYSLFVLAPSKICKFLFSLNT
                     MISNFSGVPLAFAFIIVLGSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAI
                     LLLLPAFKSLENSHLNACKMLGGGNFLYWLKIALPLLAPALFGVFVILFANAFGAYAT
                     IYALSSGNFNVAPVRIAALIAGDINLDPYMASALSIIITIIMLVVTFIANFLSKKYNF
                     KVL"
     gene            complement(4029..4838)
                     /locus_tag="RJ318_000707"
     CDS             complement(4029..4838)
                     /locus_tag="RJ318_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HDV7430598.1"
                     /translation="MMSKAILVVLDGLNCKSASINMGYLNALCKENLGKFYSLECELP
                     SMSRPLYECLLTGVKPVLSGIINNKLSFSKQTSIFDLCKEQGLKAGGAAYHWVFELYN
                     KKEFIPSLHRHIEDENLTLPYGHFYYEDDYLDSHLFADGEHLRNKYNLDFTLIHSMNI
                     DDAGHKFGSHSIEYANKTKKVDILISEYLPTWLEQGINVIITSDHGMTEGKSHGGLSE
                     DEILVPFFTFGSAFSYENAKIKQDEICGSICEILGLKHDKRYNDEILKAKK"
     gene            complement(4835..6160)
                     /locus_tag="RJ318_000708"
     CDS             complement(4835..6160)
                     /locus_tag="RJ318_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HDV7430599.1"
                     /translation="MKKVILTSAMLCSVLFGVQEYEANLAGHIIIDSKSTVKPPKDAP
                     DFFKTYGKFANIAREEKIGTFKSKGNRETDFYLPFKNQPIQGHSGIKYIPKKDVFWVI
                     SDNGLGKKYNSYDAMLYAHEFKFDFKNSKYELLKTVFFKDSDKKYPYPITTETTKERY
                     LSGVDFDTESIQVINDEFYIGDEFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPSL
                     KFSDKPDGENEKFNIKRSKGFEAMASSKDGSKLYLLLEGSIYNNNAYENEKGKEYLRI
                     IEFNVKNKKFTGKTYKYFLEDKSHSIGDFNMIDDKYGIIIERDQKEGTKDKACKEGED
                     TKHCFNNVAQFKRIYKVKLDDKTHEAQKISYIDLLNIKDRNKISKKPLVNDKFVFPFE
                     TIEGVDIVDDSHIVVENDNNFPYSSSREPNKTDDNEFILLEVKDFLKSK"
     gene            complement(6171..7217)
                     /locus_tag="RJ318_000709"
     CDS             complement(6171..7217)
                     /locus_tag="RJ318_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDV7430600.1"
                     /translation="MSKKFFLSLGLVALLFSNSQAIDENLIKAAQAEGRVNSLAMPDT
                     WANWKDTWADLKNLYDIEHSDTDMSSAQEIAKFKTEKKNASGDIGDVGASFGEIAVKQ
                     GVAQPFKTSYWDQIPTWAKDKDGNWLLAYTGTIAFIVNKDVVKDIPKTWQDLLKGNYK
                     ITVGDVSVAAQAVSAVLAANYALGGDEKDLSPALAFFNTLAKQGRLVNNDVSIANLEK
                     GEVEVGLVWDFNGLGYRDKVGKDRYEVLIPADGSVISGYTTIINKYAKHPNAAKLARE
                     FILSDKGQINLAKGYARPIRIDHITLPDDIKAKLLPSEQYKNARAIKDQKAWEKSAKE
                     LPQLWQEKVIVDMK"
     gene            7334..8317
                     /gene="corA"
                     /locus_tag="RJ318_000710"
     CDS             7334..8317
                     /gene="corA"
                     /locus_tag="RJ318_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDV7430601.1"
                     /translation="MLYIYIKTQNALVQRINFNLDSQELPQNILWIDLLHPSAAEIAF
                     ISSEFNLEFPTKEEREEIELSAKYWEDNATITINAHFLVRDLKSDEEDRNLIKLRTEI
                     VTFATAKNILFTIRYNEFSTFEEIQARILASPKNFEDGFDIIDKMFEVRVEKDADLLE
                     WIDKEARRLRTSVLEKKDEYSYDEMLKDISSLQELNMRVRDSLFDKRRAMTSLLKSDK
                     IDKDIKQNLTIVLKDLNSLVEFSVSQLNILDNIQTILASQINIEQNKVIKIFTVATVA
                     MMPPTLIGTVYGMNFKFMPELELHYAYPIVLGVMVISIILPLVVFKKKGWL"
     gene            8338..8880
                     /gene="mog"
                     /locus_tag="RJ318_000711"
     CDS             8338..8880
                     /gene="mog"
                     /locus_tag="RJ318_000711"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HDV7430602.1"
                     /translation="MDTINIGILTLSDRASSGIYEDKATAEIERVLNSYIKNDIIYHK
                     ELIPDDYDLIIKKLLYLADEKKCDLIVTSGGTGPALRDVTPEATEAVCDKMMPGFGEL
                     MRLESLKYVPTAILSRQSAGIRNKSFIINLPGNPKAIKECLEPVFPAIPYCIDLIEGA
                     YIEANDEVIKVFRPKKKCQN"
     gene            complement(8877..9062)
                     /locus_tag="RJ318_000712"
     CDS             complement(8877..9062)
                     /locus_tag="RJ318_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein"
                     /protein_id="HDV7430603.1"
                     /translation="MFFKKKISQKQKEKPKIPINDVILDDRLCKFKNKVQKISKDEAS
                     ASLLARQLSRLIRANKF"
     gene            9189..10376
                     /locus_tag="RJ318_000713"
     CDS             9189..10376
                     /locus_tag="RJ318_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDV7430604.1"
                     /translation="MTLIAILCLYTALLSWISYAQIRFLEREKDKQAQILSEKDYQNA
                     ADIAIENEKFKLFSNFYNLIISIAWIGFGFLYLKELLILNNTRFENTLFLLSFLIITS
                     ILNLPLSIYESFIKDKAHGFSNMTVKLFIKDTMKSLILTLIFGFLILYTLLFCYDFFG
                     TFWWIAAFIFAFCIIVIINLIYPTLIAPIFNKMKKLDDENLLKKISSLMKQCGFSANG
                     VYVIDASKRDKRLNAYFGGLFKSKRVVLFDTLLKALNERELLAVLGHELGHFVHKDII
                     KALFNGAITMFLLFFVFANLPEFVYLESHLEGVNGGVFALLFILANIFSFLISPMLNA
                     LSRKNEFAADQHGAKVTSKEDMKNALIALARENKAFIKTSKIYTFFYLSHPSISDRIK
                     ALS"
     gene            10373..11188
                     /locus_tag="RJ318_000714"
     CDS             10373..11188
                     /locus_tag="RJ318_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDV7430605.1"
                     /translation="MTIKNALMEAKSSLKGYENEAVFILCEYLKKDKAWLFLNQDIKI
                     DHEPYFELIKRFKSGEPFEYIFEKVDFWGLEFKIKKGILIPRYDSEILLFQILNLCKK
                     NTFNGILEIGFGSGILSIVLAKELGLKITACDINPKALELALENAQLHKVDHLIDFKL
                     CNFKQIKENYDFIFSNPPYIKNSYPIDIWVQKEPKEALFGGEKGYEILEEIIHFSLDK
                     KVKFLACEFGYDQKEILEKILYQNNFIVDFFKDEQGYNRAFIAKFTNMRYDKK"
     gene            11201..11671
                     /locus_tag="RJ318_000715"
     CDS             11201..11671
                     /locus_tag="RJ318_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HDV7430606.1"
                     /translation="MKAVNLFLLASIIGVELILGIVVAPTIFFPQNLIGEGVLSHFQS
                     GLMMTQIFIKMGYLLIFVSVVNFLYEIYSLIKDEMKFQIKFSKFMLSLLILILSLIFV
                     FYFTNTIIELQNLGENATKTQEFISIHNASEVVIKIILIMQVFLYFLSFKIAKK"
     gene            11710..12459
                     /gene="flaC"
                     /locus_tag="RJ318_000716"
     CDS             11710..12459
                     /gene="flaC"
                     /locus_tag="RJ318_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin C"
                     /protein_id="HDV7430607.1"
                     /translation="MMISDATMMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLA
                     IADSLRSQSSTIDQGVANAYDAIGVLQIADASLTNISQSADRLNELSVKMNNAALNDS
                     QKGMLRTEATRIQESINDSFNNATYNGKNVFQTMNFVVGSGTETTNLNPLATDGLSID
                     SQDSITNFMDQLGSLRSEIGSGINAITSNINASVQNSINSKAAENNLLNNDMAKNVND
                     FNANYLKENAAAFVAAQSNMQLQSKIANLLQ"
     gene            12494..13126
                     /locus_tag="RJ318_000717"
     CDS             12494..13126
                     /locus_tag="RJ318_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDV7430608.1"
                     /translation="MTLEQILEKTKNVRLVAASKYVDASIIEKLFDQGIVEFGENQVQ
                     ALAQKKENLDEKKLDIKWHFIGTLQSNKINLLIKQKPILWHSCNGIKIAKAMDKRLDY
                     KLNTLLEINSANENSKSGLDPNQAVEEYLQIQEECSNLNLCGVMSIGSHSQDKENIIK
                     SFETTFKIYEILQKHGAKICSMGMSNDFEIAIKCGSNLVRLGSILFKNLK"
     gene            complement(13138..16740)
                     /gene="dnaE"
                     /locus_tag="RJ318_000718"
     CDS             complement(13138..16740)
                     /gene="dnaE"
                     /locus_tag="RJ318_000718"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDV7430609.1"
                     /translation="MSQFTHLHLHTEYSLLDGANKLKELALTLKEQGATSVAMTDHGN
                     MFGAIDFYQTMKAQGLKPIIGIEAYLHNHDELDDKSSRQRFHLCLYAKNEIGYQNLMY
                     LSSQSYIKGLYYYPRINKKLLEDYSEGLICSSACLQGEVNWHLNTYSERNVRFGAKGY
                     EAAKEAALWYKKVFKDDFYFEIMRHGIGDQRMIDDDIIRLSKELNIKIIATNDTHYTF
                     KERAAAHEVFMCIAMGKKLNDPDRMRHSVHEFYVKSPEQMSELFADIPEAIENTQEIA
                     QKCNLELNLGNPTPPNFKFTREYAKDHNIILPEETKEFSFDNDDMVFEELCKKGLEER
                     LKFIDESKHEEYKQRLEVEINIIKNMKFSGYMLIVHDFIKVAKDKGIPVGPGRGSAAG
                     SLVSYCLRITDLDPIPYSLLFERFLNPERVSMPDIDVDFCQDRRAEVIDYVIDKYGAD
                     KVAQVITFGKLLAKGVIRDVARVCDMSIQDADELAKLVPEELKITLDAAYEKEPKIKE
                     FIDRHPKGLEVWEYARALEGLNRNAGMHAAGVVISNESLWKKTPLFRQSKNDERHLVT
                     QYSKDHLEDVDLIKFDFLGLKTLTVINNAIKLIKKRYNKDIIWETIDVNDSKVYKTIQ
                     SGNTLGIFQIESGGMQSLNARLKPERFEDIIAVLALYRPGPMESGMLDDFIDRKHGLK
                     SIEYPFDSLEKVLEPTYGVIVYQEQVMQIVQIIGGFSLGGADVVRRAMGKKDPEKMKK
                     LKTDFADGAEKQGYDRAKAEDLWELIVKFAGYGFNKSHSAAYALITFQTAYLKTYYPS
                     EFMAALLTSEENNVDKIAVYIDEMKKMNIKLLPPSINKAIREFSALEQDGKDAIIYGL
                     GAIKSVGIPAVENLLEARQDGEFKDINDFLGKIDPTKINRRTLESLIKAGAFDEFGFT
                     RKALFDNMENLSEASRKMAEVRKNAASSLFGEEELTSGVQVNFTPKNEEFEVMEKLGY
                     EKEILGIYVSGHPLDRFYEQINAIDYVKSLDFESLKNNGEILSIGKIEDFKSMMSKNN
                     KRYGRIEILDYYSSFDATVFESNVEEIENIIKDENLKNNAYGFVLGFKAEGGEKPSFF
                     LKAIKDLQSLEDGEIKAIKKFGAKKDFKNKEENHFTAEPKEFEKNIIELDLTRLNREL
                     IYEIHEIARNAHNPNEKNNKKLVLKVISAGSCLLYHTDFIISDSIVEEISNKYA"
     gene            16969..17175
                     /locus_tag="RJ318_000719"
                     /pseudo
     CDS             16969..17175
                     /locus_tag="RJ318_000719"
                     /inference="COORDINATES: protein motif:HMM:TIGR02174.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SelT/SelW/SelH family protein"
     gene            complement(17188..17517)
                     /locus_tag="RJ318_000720"
     CDS             complement(17188..17517)
                     /locus_tag="RJ318_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family transcriptional regulator"
                     /protein_id="HDV7430610.1"
                     /translation="MKLYGIKNCNSVKKAMDALTQKGIVFDFMDIKKINQDILYTWLK
                     QKSFEELINTAGLTSKKLGLNKEKVKNLNEKELEKIVLENPSCIKRPIIEYEQNIYIG
                     KEYEKML"
     gene            complement(17514..18854)
                     /locus_tag="RJ318_000721"
     CDS             complement(17514..18854)
                     /locus_tag="RJ318_000721"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HDV7430611.1"
                     /translation="MWAKNSWKNYPIKQQPIYPDQEEMNRVLARLEKLPPLVFAGEVR
                     NLQKSLARVCKKEAFLLQGGDCAESFENFGAVNIRDMFKILLQMAIVLTFAGGCPVIK
                     IGRIAGQFAKPRSSDFEELDGISLPSYRGDIINGFEFSEQARIPDPHRMLEAYYQSAI
                     TLNLLRGFAKGGLADLHEVHRWNLGFLKKSELHKQYTDISEKISQALAFMEACGINTS
                     NTPSLREVSVYTSHEALLLPYEEALTRVDSLSGEIYDCSAHMLWIGERTRALDEAHVH
                     FLSGVKNPLGVKIGPSASADDIIALANVLNPNNEEGRLNIIIRMGADKIINNLPKIFS
                     KLKSEGLNLVYSIDPMHGNTVKAGNFKTREFDKIMQEVRSFFEIAISEGVYPGGVHLE
                     MTGKDVTECTGGASNVTAQSLEDRYETQCDPRLNADQALELAFLIADLVKKTRK"
     gene            complement(18878..19291)
                     /gene="uraH"
                     /locus_tag="RJ318_000722"
     CDS             complement(18878..19291)
                     /gene="uraH"
                     /locus_tag="RJ318_000722"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HDV7430612.1"
                     /translation="MFSIKKTLLILASVPMFLSATEYQLSTHVLDITSGQPAPKVKVE
                     LYKLEANQQWKKVSEEFTEENGRIGDLLPYEKAENRAFGIYKLKFFTKDYYTSHKINT
                     FYPFVEVSFELSKDQKHYHVPITLSPFGYSTYRGS"
BASE COUNT         6795 a         3268 c         2602 g         6645 t
ORIGIN      
        1 aaaaaatgaa aaaaatatta agcattgctc tagttgcttt agttggttta tttttaggtg
       61 cttgtagtga ttctaaaaat aaagaatcaa atgcaagtgt agaattaaag gttggaactg
      121 ctccaaatta taaacctttt aattataaag aaaactcaaa acttacaggt tttgatactg
      181 atttggttga agagattgcc aaaaaaaatg gtattaaaat tgtttgggtt gaaaccaatt
      241 tcgatggatt gattcctgct ttaaaagctg gcaaaatcga tatgattgcc tcagctatga
      301 gcgcaactga cgaaagaaga caaagtgttg attttaccaa accttactat atgagtaaaa
      361 atctttatct taagctaaaa aacaacgact ctcttcaaac gaaaaatgat ttagaaggta
      421 aaaaaatagg agttcaacta ggaactttac aagaaaatac tgcaaaagct atcaaaaatg
      481 cacaagtaca aagcaataaa gatttaaaca tagctgtttt agcactaaaa aacaacaaaa
      541 tcgatgctat tgtagctgat caagatactg ctaaaggttt tttagctgaa aatccagaat
      601 tggtaagctt ctaccaagaa acagatggag gggaaggctt tagttttgct tttgataaaa
      661 ataaacaaaa aaatattatt gaaatattta acaaaggcat agatgaagca aaaactgatg
      721 gattttatga tactttaatt aaaaaatatg aattagaata agcgtgaatt ttcacgctta
      781 tagcttaaaa agttaaaatt tcatattttc tctcttttgc aatttttaaa attttttcat
      841 caccattaca tacaaaggct ttgctaacag actctagtaa aggtaaatca ttgatagaat
      901 cactaaaaaa ataagaatct ttcatccatt tttcataatc tttacccaaa tattccttaa
      961 gtcttaaaac cttgccttcc ttaaagctat aaatcccata agcttttcca ctaaatttat
     1021 cacccacacg ctcgcatttt atggctatgc tttctctcac tcccaaaaaa gaggcgattt
     1081 ttctaactaa aaattcagcc gtagctgaaa ttataataca cctttgatct tgatatttga
     1141 ttataagttc tttagctttt tcataaggtt ttatataaat ttttataaat tcatctacca
     1201 aagatgaaat tccatcttca tttttaccct taacactttg aagaaaaaaa gtcataaatt
     1261 catccatatc aaactttttt tcttgatatt gtttttgata aaaaacgatt ttttctaaat
     1321 attcttgagg taaaaaacct ttttcaacac aaaatttaag ccaaagttta gcactatcgc
     1381 cttgtattaa agtatcatct aaatcaaata aaacaagctt cattttaact cttttgctaa
     1441 agaaagattg aattttaaag cgattttatc acctgcttca taagtactat gagtgctaaa
     1501 atttaaagta tctaccttaa attcaatttc ttgcactcta accctatagc gtatgatatt
     1561 gcctagcaat gatttttctt tgattttagc ctctaagcct tcgttagaaa tttctatggt
     1621 ttcaggacgc aaggctatat cttttttaaa atcgtgtttt aaacccaagc tatcaagctc
     1681 tttagggctt aaaatattgt aatttcctat aaagctagcc acaaaatgag attctggcaa
     1741 aagataaaga ttatttgcgt tggaattttg tatgatttta ccctcattca ttaaaataat
     1801 cgtatcggat aactctaaag cttcttcttg atcgtgcgtt acaaaaatag tggtgagttc
     1861 aagttctttt tgaatttctt taatttgcac ccttaaatac ttacgaattt tagcatcaag
     1921 tgccgataaa ggctcatcaa gtaaaagtaa atcaggttta atcaccaaag atcttgctaa
     1981 agccactctt tgcatttgtc cgcctgaaag cttatgtgga taagttttag cgtattcttc
     2041 aagctcgacg agttttaaca tttttttcac tcttttttct atgtcctttt tatccatttt
     2101 tttgatcttt aaaccaaaag ctacattttc aaaaacgtta agatttggaa aaagagcgta
     2161 attttgaaaa accataccta tatttctttt ttgaggactt aatttggtaa gatctttatc
     2221 atttaaagaa atttttcctc cattaatttg gctaagccct gctatacacc ttaaaagagt
     2281 ggattttcca cagccacttg ggcctaaaag ggttataaac tcaccctttt tagcactaaa
     2341 attaatatct tcaaaaataa ttttatcccc ataagctttt ttaaaatttt taatctttaa
     2401 ataagccatt tttcactcct taatcaaact agctataaaa gttgttataa aaattaatac
     2461 aaaataaact attaccaaag cactagaata atgcccactt tgatttttga tattataaag
     2521 ataaacttgt aaagtctcat aagcacttcc tacaagaata tttgcgtata aaaattcacc
     2581 tattaaaaaa gaaaaactta aaaaaactgc caccaaaatt ccatttctta agttaggcaa
     2641 gataagttta aaaatcgctc ccattaaaga acctccaagc atagcattag atgtgatgag
     2701 ttcatttaaa ttgacattag atatagcatt atctaaagcc ctatatataa aaggtaaagc
     2761 tatagtaaaa taagtaaaaa tgagtatcca agctgtgcct cctatattgt cagcataaag
     2821 ttgcaaaagc cccacacagc taactatagg aggtacagca aaaggcatga taataagtat
     2881 atttacaaag gcttttaatt ttaaaaaata ataatttagc acaaaaacca aagggaaaac
     2941 aagaatcaca gaaagtaaaa tactgcccac acaaacaagc aaagaatgcc aaagagcaag
     3001 taaaaatctt tcgtcatgaa aaagttcttg ataccattta agcgtaagat catcaggcaa
     3061 aacacttaca ccccaagaag tggaaataga atataaaaaa gtagccatta aaggcaaagc
     3121 taaaaataaa aaaaccaaaa acaaaactgc ataatgataa attttagctt ttaaactcaa
     3181 attttcattc atttaaagca ccttaaaatt atatttttta gaaaggaaat tggctataaa
     3241 ggtaacaaca agcatgataa tagttataat gatgcttaaa gcactagcca tataaggatc
     3301 aagattgata tcgcctgcga ttaaagcagc gattcttaca ggagcgacat taaaatttcc
     3361 cgaacttaaa gcataaatag tcgcataagc tccaaaagca ttggcaaata aaatcacaaa
     3421 aacaccaaac aaagcaggag cgagcaaagg caaagctatt tttaaccaat ataaaaaatt
     3481 gcctccacct aacattttac aagcatttaa atgtgaattt tcaagacttt taaaagctgg
     3541 aagcaaaagc aagattgcca aaggaatttg aaaatacaca taaacaatat ttaccccgaa
     3601 attagcataa acactaacaa aaggctctat gcctaaattt ttcaaaaaca cattaactac
     3661 accattgctt ccaagaacta taatgaaagc aaaagctaaa ggaactcctg aaaaattact
     3721 tatcatagta tttaaagaaa aaagaaattt acatattttt gatggagcta aaacaaataa
     3781 agaataactc gccaaaagcc ctattaaaag tccaaaaata ctagaaataa aactgatttg
     3841 taaagaattt ataatgcttt gtagatagaa tttggactca aaaatatgta taaaattggc
     3901 taaagaataa atttcatcct cttctacata aaaagcatta aaaacaatcc aaatcaaagg
     3961 cgctatcata aaaaaagtaa aaactataaa aaaaggtaaa atacttaaaa aggctagaaa
     4021 tttttctttc attttttggc ctttaaaatt tcatcattat atctcttatc gtgtttaagt
     4081 cctaaaattt cacagatact gccacaaatt tcatcctgtt ttatcttggc attttcatac
     4141 gaaaaagcac taccaaaagt gaaaaaaggc actaaaattt catcttcact taagcctcca
     4201 tgacttttac cctctgtcat accatgatcg cttgtgatga ttacattaat accttgttct
     4261 aaccaagtag gcaaatactc agaaatcaaa atatcaactt ttttggtttt attagcatac
     4321 tcaatagagt gtgagccaaa tttatgtcct gcatcatcta tattcataga atgtataaga
     4381 gtaaaatcta gattatattt gtttcttaaa tgctccccat ctgcaaataa atgagaatct
     4441 aaataatcat cttcataata aaaatgtcca taaggcaaag ttaaattttc atcttctatg
     4501 tggcgatgta aagaaggaat aaattctttt ttattataaa gctcaaaaac ccaatgataa
     4561 gctgcgcctc cagcttttaa gccttgttct ttgcaaaggt caaaaatgct tgtttgtttt
     4621 gaaaaactca atttattatt aattatccca cttaaaacag gctttacgcc tgttaataag
     4681 cactcgtata aaggacgaga catactagga agttcgcatt ctaaagaata aaatttgcct
     4741 aaattctctt tgcaaagcgc atttaaatat cccatattta tactagcact tttacaattt
     4801 aagccatcaa gcacaactaa aatagctttg gacatcattt actctttaaa aaatctttta
     4861 cttcaagtaa aataaattca ttatcatcag ttttattagg ttctctactt gaagaataag
     4921 gaaagttatt gtcattttct acgactatat gagagtcatc tactatatcc acaccttcta
     4981 tggtttcaaa aggaaaaaca aatttatcat ttaccaaagg ctttttagaa attttatttc
     5041 tatccttaat atttaaaaga tctatataag aaattttttg agcttcatga gttttatcat
     5101 ctaatttaac cttataaatt cttttaaatt gagctacatt attaaaacaa tgcttagtat
     5161 cttcaccttc tttgcaagcc ttatctttag tgccttcttt ttgatctctt tctatgatga
     5221 tgccgtattt atcatctatc atattaaaat cacctatgga atggctttta tcttctaaga
     5281 aatatttata agtttttcca gtgaattttt tattttttac attaaattct atgattctta
     5341 gatattcttt acctttttca ttctcataag cgttgttatt ataaatgctt ccttctaaaa
     5401 gcaaataaag tttagaacca tctttagagc ttgccatagc ttcaaagcct ttagaacgct
     5461 tgatattaaa tttctcattt tctccatcag gcttatcgct aaattttaaa cttggattat
     5521 caggagaaat aagtttttta ccctccacat acacatcaaa aacttctttt aaattcccat
     5581 tcttatcaaa atgaagcaaa taaggaccaa attcatcacc tatataaaat tcatcattga
     5641 taacctgtat actctcagta tcaaaatcaa ccccacttaa atacctttct ttggttgttt
     5701 cggtggttat aggatagggg tattttttat cactatcttt aaaaaaaact gtttttaaaa
     5761 gttcgtattt tgagttttta aaatcaaatt taaactcgtg agcataaagc atggcatcat
     5821 aagaattata ctttttaccc aagccattat cgctaattac ccaaaaaaca tctttttttg
     5881 gaatatattt tatcccacta tgtccttgta taggttgatt tttaaaaggt aaataaaaat
     5941 ctgtttccct gtttccctta gatttaaaag ttccaatttt ttcttctcta gcgatatttg
     6001 caaatttccc ataagtttta aaaaaatcag gagcatcctt aggaggtttt actgtacttt
     6061 tagaatctat gataatatgc cctgctaaat tggcctcata ctcttgaact ccaaataaaa
     6121 cactgcaaag catagcactt gttaaaataa cctttttcat ccaatctcct ttatttcata
     6181 tccactataa ctttttcttg ccaaagttgt ggcaattctt tagcgctttt ttcccaagct
     6241 ttttgatctt tgattgctct tgcatttttg tattgctcac ttggtaaaag tttagctttt
     6301 atatcatctg gcaaggtaat atgatcaatt cttattggcc ttgcataacc ttttgctaga
     6361 ttgatttgtc ctttatcaga aagtataaac tcacgggcta atttagccgc atttggatgt
     6421 tttgcgtatt tattgataat agttgtataa cccgaaataa cactaccatc agcagggatt
     6481 aaaacttcat aacgatcttt gcccacttta tctctatagc ctaaaccatt aaaatcccaa
     6541 actaaaccca cttcaacttc acctttttca agattggcta tacttacatc attatttaca
     6601 agtcttcctt gtttggctaa agtattaaaa aaagctaaag caggacttaa atctttttca
     6661 tccccaccta aggcataatt agctgccaaa actgcactca cagcttgagc tgctacactt
     6721 acatcgccca cggtaatttt ataatttccc ttaagcaaat cttgccaagt tttaggtata
     6781 tcttttacta catctttatt gactataaaa gctatggttc ctgtataagc taaaagccaa
     6841 tttccatctt tatctttagc ccaagttgga atttgatccc agtaacttgt cttaaaaggc
     6901 tgagctactc cttgtttaac cgctatctct ccaaaagacg cccctacatc ccctatatca
     6961 ccgcttgcat ttttcttttc ggttttaaat ttagcaattt cttgagctga actcatatct
     7021 gtatcactat gttctatgtc ataaagattt ttaagatctg cccaagtatc cttccagttt
     7081 gcccaagtat caggcatagc taaagaattt accctacctt ctgcttgcgc agctttaatc
     7141 aaattctcat caatagcttg tgaatttgaa aacaataaag caacaagacc taaacttaag
     7201 aaaaatttct tactcatttt tttcctttca aaaaatattt tggaaattta atgagtttta
     7261 gaaacatttt agaaacaagt taatttttaa gcaaacaagg ttataatttt aaagtcataa
     7321 acaaggagcg atcatgcttt atatttatat caaaactcaa aatgctttag ttcaaagaat
     7381 caattttaat ctcgatagtc aagaactacc gcaaaatatt ttatggattg atttacttca
     7441 tccaagtgca gcagaaattg cttttatatc aagtgaattt aatcttgagt ttcctacaaa
     7501 agaagaaagg gaagaaatag agcttagcgc aaaatattgg gaagataatg caacaataac
     7561 catcaatgct cattttttag taagagatct taaaagtgat gaagaagata gaaatttaat
     7621 caagcttcgc acagaaattg ttacttttgc taccgctaaa aatatcttat ttactataag
     7681 atataacgaa tttagcactt ttgaagaaat tcaagcaagg attttagcta gtccgaagaa
     7741 ttttgaagat ggttttgata ttattgataa aatgtttgaa gtacgcgttg aaaaagatgc
     7801 ggatttacta gaatggatag ataaagaagc aagacgctta agaacaagtg ttttagaaaa
     7861 aaaagatgaa tatagttatg atgaaatgct aaaggatatt tcaagtttgc aagagcttaa
     7921 tatgcgcgta agagattctt tatttgataa gcgtcgcgct atgacttctt tgttaaaaag
     7981 cgataaaatc gataaagaca taaaacaaaa tctcactata gttttaaaag acttaaattc
     8041 tttggttgaa tttagcgttt cgcaacttaa tatcttagat aatatccaaa ccattttagc
     8101 cagtcaaatc aacatagaac aaaacaaagt cattaaaatt ttcaccgttg caactgttgc
     8161 catgatgcca cctactttaa taggaactgt ttatggtatg aattttaaat tcatgcccga
     8221 acttgaactt cactatgctt atcccatagt gcttggcgtg atggtaattt ctatcatttt
     8281 acctttggtt gttttcaaga aaaaaggatg gttataaaaa tttattaagg agaaacaatg
     8341 gatacaataa acataggaat tttaacccta agcgatagag caagtagtgg tatatacgaa
     8401 gataaagcca ctgctgaaat tgaaagagtg ttaaattcat atataaaaaa tgatattatt
     8461 tatcataaag aattaatccc tgatgattat gatttgatca ttaaaaaatt actttatcta
     8521 gcagatgaaa aaaaatgcga tttgattgtt acaagcggag gtacaggtcc agcacttcgt
     8581 gatgtaaccc cagaagccac ggaagccgtg tgtgataaaa tgatgccagg ttttggagaa
     8641 cttatgcgct tagaaagttt aaaatatgtc ccaacagcta tactttcaag acagagtgca
     8701 ggaattcgca ataaatcttt tatcattaat ttaccaggaa atcctaaggc tataaaagaa
     8761 tgcctagagc ctgtttttcc ggctatacct tactgtatcg atttgataga aggtgcttat
     8821 atagaagcaa atgatgaagt tattaaggtt tttcgcccta agaaaaaatg tcaaaattaa
     8881 aatttattag ctctgataag tctgcttaat tgtctagcaa gcagacttgc cgaagcttca
     8941 tctttgctta tcttttgcac tttattttta aacttacaaa gtctgtcatc taaaatcaca
     9001 tcattgattg gaattttagg cttttctttt tgtttttgtg aaatcttttt cttaaaaaac
     9061 attctttaat ccttttttat aaatatatac caacttagtt gaaaagaata ttattttaga
     9121 ttttaaacta ttaactttat ttcattattt taagctagaa ttcgcaaaaa actaatcaag
     9181 gaaaaataat gactttaatt gcaattttat gtctttacac agcactttta tcttggattt
     9241 cctatgctca aattcgtttc ttagaaagag aaaaagacaa acaagctcaa attttaagcg
     9301 aaaaagacta tcaaaatgca gcagatattg ccatcgaaaa tgaaaaattt aaactatttt
     9361 ccaattttta taatttaatc atcagtattg catggatagg ttttggattt ttatacctta
     9421 aagaattact tatcttaaac aacactcgtt ttgaaaatac tttattttta ttatcttttt
     9481 taataatcac aagtatttta aatctacctt taagtattta tgaaagtttt atcaaagata
     9541 aagcccatgg tttttcaaat atgactgtaa aactttttat caaagatact atgaaaagtc
     9601 ttattttaac tttaatattt ggatttttaa tcctttatac tttgcttttt tgctatgatt
     9661 tttttggaac tttttggtgg attgcggcct ttatttttgc cttttgtatt atagtgatta
     9721 taaatctcat ctaccctacc ttaatagcac ctatttttaa taaaatgaaa aaactagacg
     9781 atgaaaattt gctgaaaaaa atcagctctt tgatgaaaca atgtgggttt agtgcaaatg
     9841 gggtttatgt tattgatgca agcaaaagag ataagcgttt aaatgcttat tttggtggac
     9901 tttttaaaag caaaagagtg gtgctttttg atacattatt aaaagcctta aatgaaagag
     9961 aacttttagc tgttttagga catgagcttg gacattttgt tcataaggat attatcaaag
    10021 ctttatttaa cggcgctata actatgtttt tacttttttt tgtttttgca aatttacctg
    10081 aatttgttta cttagaaagt catctagaag gagtaaatgg tggcgtgttt gctcttttgt
    10141 ttatcttggc gaatattttt agctttttaa tctctcctat gcttaatgcc ttaagtagaa
    10201 aaaatgaatt tgcagctgat caacacggag ctaaagttac aagcaaagaa gatatgaaaa
    10261 atgcattgat agctctagca agagaaaata aagcttttat caaaacaagt aaaatatata
    10321 cattttttta tctcagtcat ccaagtatta gtgatagaat caaggctctt tcttgactat
    10381 aaaaaatgct cttatggaag ctaaatctag cttaaaaggt tatgaaaatg aagcggtatt
    10441 tatactttgc gaatatctaa aaaaagataa agcttggtta tttttaaacc aagatataaa
    10501 aatagatcat gaaccttatt ttgagcttat aaagcgtttt aaatctggag aaccttttga
    10561 atatatattt gaaaaagtgg atttttgggg cttagaattt aagataaaaa aaggcattct
    10621 aatccctcgc tacgatagtg aaattttact ttttcaaatt ttaaatttat gcaaaaaaaa
    10681 tacttttaat gggattttag aaataggatt tggaagcgga attttaagca ttgttttagc
    10741 caaagaactt gggttaaaaa tcacagcctg tgatatcaat cccaaagcct tagaattagc
    10801 tttagagaat gcccaattac acaaagtcga tcacttgatt gactttaaac tttgtaattt
    10861 taagcaaatt aaagaaaatt atgattttat tttttcaaat ccaccttata ttaaaaattc
    10921 atatcctata gatatttggg tgcaaaaaga acccaaagag gctttatttg gcggagaaaa
    10981 aggatatgaa attctagaag aaatcataca tttttccctt gataaaaaag ttaaattttt
    11041 agcttgcgaa tttggctatg atcaaaaaga aattttggaa aaaattttat atcaaaataa
    11101 tttcattgtt gattttttca aagatgaaca aggttataat cgtgctttta tagctaaatt
    11161 tacaaatatg cgttatgata aaaaataaaa ggagaaactc ttgaaagctg ttaatttatt
    11221 tttacttgcc tccatcatag gggttgaact catactagga atagttgttg caccaacaat
    11281 tttttttcct caaaatctta taggagaagg agtgttgagc cattttcaaa gtggcttaat
    11341 gatgacgcaa atttttatta agatgggata tttgctgatt tttgtttcag tggttaattt
    11401 tttatatgaa atttattctc ttataaaaga tgaaatgaaa tttcaaataa aattttcaaa
    11461 atttatgctg agtttgctta ttttgatttt aagcttaata tttgtttttt attttactaa
    11521 taccataatt gaactccaaa acttaggcga aaacgctaca aaaactcaag aatttatcag
    11581 tatccataat gcaagtgaag tggtgattaa aatcatcttg ataatgcaag tttttttata
    11641 tttcttaagc tttaaaatag caaaaaaatg ataaaatatt aaataaatcc aaaagagaag
    11701 gagtaggcca tgatgatctc tgatgcaact atgatgcaac aaaattatta tttaaataat
    11761 gcacaaaaag ctagcgataa agctttagaa aatattgcag ctgttcgcgc aataagtgga
    11821 gttgatagtg ctaatttagc tattgctgat tctttaagat ctcaatcaag cactatagat
    11881 caaggtgtcg caaatgctta tgatgctata ggggttttac aaattgcaga tgctagcctt
    11941 accaatatct ctcaaagcgc agatagactt aatgaacttt cagtaaaaat gaacaatgct
    12001 gcacttaatg attctcaaaa aggaatgcta agaacagaag caacacgcat acaagaatcc
    12061 atcaatgatt cttttaataa tgcaacttat aatggaaaaa atgtctttca aactatgaat
    12121 tttgtagtag gtagcggaac tgaaactaca aatttaaatc cattagcaac agatggatta
    12181 agcatagata gtcaagatag tattacaaat tttatggatc aacttggaag tttaagaagt
    12241 gaaataggct caggtatcaa tgccatcaca tcaaatatta atgcaagtgt tcaaaatagc
    12301 atcaactcaa aagcagctga aaataattta ctaaataatg acatggcaaa aaatgttaat
    12361 gattttaatg ccaattatct aaaagaaaat gctgctgctt ttgttgctgc gcaatccaac
    12421 atgcagcttc aaagcaaaat tgctaattta ttacaataaa ataagcccta aatagggctt
    12481 attttttatc aaaatgactt tagagcaaat tttagaaaaa accaaaaacg ttcgtcttgt
    12541 agccgcaagc aagtatgtcg atgcaagtat aattgaaaag ctttttgatc aaggtatagt
    12601 agaatttgga gaaaatcaag tccaagctct agcacaaaaa aaagaaaatc ttgatgaaaa
    12661 aaaactagac ataaagtggc attttatagg aacgctacaa agcaacaaaa tcaatctctt
    12721 aatcaaacaa aaacctatat tatggcactc ttgcaatggt attaaaatag ctaaagctat
    12781 ggacaaaaga cttgattata aattaaatac tttattagaa atcaatagtg caaatgaaaa
    12841 tagcaaaagc ggtctagatc caaatcaagc cgtagaagaa tatttacaaa tacaagaaga
    12901 atgctctaat ttaaatcttt gtggcgtaat gagcatagga tcacacagcc aagataaaga
    12961 aaatattata aaaagctttg aaactacatt taaaatttat gaaattcttc aaaaacatgg
    13021 ggctaagatt tgctctatgg ggatgagtaa tgattttgaa attgctataa aatgcggatc
    13081 caacttggta agactcggaa gcattttatt taaaaatctt aagtaaaaca atcttactta
    13141 agcatattta ttagaaattt cctctactat actatcagag ataataaaat ctgtatgata
    13201 aagcaagcaa gatcccgcac taataacttt taaaacaagt tttttattat ttttttcatt
    13261 aggattatgt gcatttctag caatttcatg aatttcatag attaattctc tattcaatct
    13321 tgtcaaatct agctctatga tatttttttc aaattcctta ggttctgcgg taaaatgatt
    13381 ttcttcttta tttttaaaat ctttttttgc tccaaatttt tttatagctt taatctcgcc
    13441 atcttcaaga ctttgcaaat ctttaattgc ttttaaaaaa aagctaggct tctcccctcc
    13501 ttcagcttta aatcccaata caaaaccata ggcattattt tttaaatttt catctttgat
    13561 gatgttttct atttcttcta cattgctttc aaatacagta gcatcaaacg aagaataata
    13621 atccaaaatt tcaattctac cataacgctt attattttta ctcatcatgg atttgaaatc
    13681 ttcaatttta cctatactta aaatttctcc attgtttttt aaactttcaa aatctaaact
    13741 tttaacataa tctatggcat taatttgttc ataaaatcga tctaaaggat ggcctgaaac
    13801 ataaattcct aaaatttctt tttcatatcc taatttttcc atcacttcaa attcttcatt
    13861 tttgggagta aaatttactt gaacacctga agttaattcc tcttcaccaa aaagagaact
    13921 tgcagcattt tttcttactt cagccatttt acgcgatgct tcgctaagat tttccatatt
    13981 atcaaacaaa gcttttctag taaaaccaaa ctcatcaaaa gcccctgcct taataagact
    14041 ttctaatgtt ctacggttta ttttggtggg atctatctta cctaagaaat cattaatatc
    14101 cttaaattct ccatcttgtc ttgcttcaag taaattttca actgcaggaa tacccacact
    14161 ttttatagcc ccaagtccgt atataatagc atccttgcca tcttgctcta aagcactaaa
    14221 ttcacggatc gctttgttaa tcgatggagg taaaagttta atattcattt ttttcatctc
    14281 atcaatataa acagcaattt tatccacatt gttttcttcg cttgttaaaa gcgctgccat
    14341 aaattcacta ggataataag tttttaaata agctgtttga aaagtaatca atgcataagc
    14401 cgcagagtga gatttattaa aaccatatcc tgcaaatttt acgataagct cccataaatc
    14461 ctcagctttt gctctatcat atccttgttt ttctgctcca tctgcaaaat cagttttaag
    14521 ctttttcatc ttctcaggat cttttttacc catagcacga cgcactacat cagcacctcc
    14581 taaagaaaag ccacctataa tttgaacaat ttgcataacc tgttcttgat aaacaataac
    14641 cccataagta ggctctaaaa ccttttctaa actgtcaaaa ggatattcta tactttttaa
    14701 accatgcttt ctgtcgataa aatcatcaag cattcctgat tccatagggc ctggacgata
    14761 aagcgcaaga accgcaatga tatcttcaaa acgctctggt tttaagcgtg catttaagct
    14821 ttgcataccg cctgattcga tttgaaaaat tcccaaagta tttccacttt gtatggtttt
    14881 ataaactttg ctatcattta catctatagt ttcccaaata atgtctttat tgtaacgctt
    14941 tttaataagc ttgatcgcat tattgattac tgttaaggtt ttaagaccta aaaagtcaaa
    15001 ttttatcaaa tccacatctt ctaaatgatc tttagaatac tgcgttacca aatgtctttc
    15061 atcattttta ctttgtctaa aaagcggagt tttcttccat aaactttcat tagaaattac
    15121 aacacctgct gcgtgcatac ccgcattgcg atttaatcct tctaaagctc ttgcatactc
    15181 ccaaacttca agacctttag gatgacgatc gataaattct ttgattttag gttctttttc
    15241 ataagcagca tcaagagtga ttttaagctc ttcaggcaca agtttagcaa gctcatcagc
    15301 atcttgaata ctcatatcac aaactctagc cacatcacga atcacccctt tagccaaaag
    15361 tttaccaaag gtaatcacct gtgcaacctt atccgctcca tatttatcaa tcacataatc
    15421 aatcacttca gcacgtctgt cttgacaaaa atccacatca atatcaggca tgctcacacg
    15481 ctcaggattt aaaaaacgct caaaaagtag actataagga ataggatcta aatccgtaat
    15541 ccttaaacaa taagaaacca aacttcctgc agctgatcct cttccagggc ctactggaat
    15601 acctttatcc ttagccactt taataaaatc atgaacaata agcatataac ctgaaaattt
    15661 catattttta atgatgttaa tttctacttc aagcctttgt ttgtattctt catgcttact
    15721 ttcatcgata aattttaatc tctcttcaag tccctttttg caaagttctt caaaaaccat
    15781 gtcatcatta tcaaagctaa attcttttgt ttcttcaggt aagataatat tatgatcttt
    15841 agcatattct cttgtaaatt taaaattcgg tggagtggga ttgccaagat taagctctaa
    15901 attacatttt tgtgcgattt cttgtgtatt ttctatagct tctggaatat ctgcaaaaag
    15961 ctcactcatc tgctcaggac ttttaacata aaattcatgc acactatgac gcattctatc
    16021 aggatcgtta agtttttttc ccatggctat acacataaaa acctcatggg cagccgctct
    16081 ttctttaaaa gtataatgcg tatcatttgt agcaatgatt tttatattta attctttaga
    16141 aagtctgata atatcatcat ctatcattct ttgatcgcct ataccatgac gcatgatttc
    16201 aaaataaaaa tcatctttaa aaactttttt ataccacaat gccgcttctt ttgctgcttc
    16261 atagcctttt gcaccaaaac gcacatttct ttcactataa gtatttaagt gccaatttac
    16321 ttcaccttgc aagcaagcag aagagcaaat aagaccttcg ctataatctt ccaaaagctt
    16381 tttattgata cgcggataat aatacaaacc tttaatataa ctttgagaac ttaaatacat
    16441 taaattttga tatccaatct cattttttgc atacaaacaa aggtgaaaac gctgacgaga
    16501 acttttatca tctaactcat catgattatg caaatacgct tctataccaa tgataggttt
    16561 taaaccttgt gctttcattg tttgataaaa atcaattgcc ccaaacatat ttccatgatc
    16621 tgtcatagcc acacttgtag caccctgctc ttttaaagtc aaagctaatt ctttaagctt
    16681 attggctcca tcaagcaaag aatattctgt atgtaaatgc aagtgtgtaa attgactcat
    16741 tttcttcctt tagtttttta aggcttattt taattttgat aaaaattata aatttttctc
    16801 gctgaatttg aaagaaattg accctaaatt tcaacttaaa ttttacaaaa aggcaaaaat
    16861 tcagccaaaa taaactataa taaaatctaa gattttaatc ttaataaaaa gaacttctca
    16921 aaggatgaaa tgatgaaagt aaaaattgct tattgcaatc tttgaaatta tcgcccacaa
    16981 gctgcaaggg ttgcagaaga actacaaagc gatttcaaag atgttgaagt agaatttgaa
    17041 attggcggca gaggtgattt tatcgttgaa gtagacggaa aagttatctt ctctaaaaca
    17101 caacttatta attgcgaaag tgaaagattt ccatatcaaa atgaaattaa tcaattaata
    17161 aaaaatagag tgtaatcaaa cactctatca taacattttc tcatattcct taccaatata
    17221 tatgttttgc tcatactcga taataggacg cttaatacaa cttggatttt ccaatacaat
    17281 tttttcaagt tctttttcat ttaaattttt aactttttct ttgtttaagc caagtttttt
    17341 agaagttaat ccagcagtat tgataagttc ttcaaaagat ttttgtttta accatgtgta
    17401 taaaatatct tgattaatct ttttaatatc cataaaatca aacacaatac ctttttgtgt
    17461 taaagcatcc atagctttct ttacagaatt gcaattttta ataccataaa gtttcatttt
    17521 ctagtctttt ttaccaaatc tgcgattaaa aaagcaagtt ctaatgcttg atccgcatta
    17581 agtcttggat cgcattgagt ctcataacga tcttccaagc tttgagcagt aacattgctt
    17641 gcaccacctg tgcattctgt tacatctttc ccagtcattt caagatgcac tccacctgga
    17701 taaacccctt cgcttattgc aatctcaaaa aaagatctca cttcttgcat aattttatca
    17761 aactcacgtg ttttaaaatt gcctgctttt accgtatttc catgcatagg atctatgcta
    17821 tatactaaat ttaaaccttc acttttaagt ttagagaaaa tttttggcaa attattgata
    17881 attttatctg cacccatgcg gataataata tttaatcttc cttcttcatt gtttggattt
    17941 aaaacatttg ctaaagctat gatatcatca gcacttgcac taggtcctat tttaacccct
    18001 aaaggatttt ttactccact taaaaaatgc acatgagctt catcaagcgc ccttgttctt
    18061 tcacctatcc aaagcatgtg agctgaacaa tcgtaaattt ctccacttaa actatccact
    18121 ctagttaaag cttcttcata aggcaaaagt aaagcttcat gtgaagtata aacactaact
    18181 tctcttagac ttggagtatt acttgtatta attccacaag cttccataaa agctaaagct
    18241 tgtgaaattt tttcactgat atcagtatat tgcttatgga gttcactctt ttttaaaaag
    18301 cccaaattcc aacgatgtac ttcatgtaaa tctgctaaac cacccttagc aaatccacgc
    18361 aacaaattta gcgttattgc gctttgataa taagcttcaa gcattctatg tggatcagga
    18421 atgcgtgctt gttcactaaa ttcaaaacca ttaataatat caccacgata actaggaaga
    18481 cttataccat ctaactcttc aaaatcacta cttcttggct tggcaaactg ccctgcaata
    18541 cgaccaattt ttataacagg acatccacca gcaaatgtaa gtactatagc catttgaagt
    18601 aaaattttaa acatatcacg gatatttaca gcgccaaaat tttcaaaact ttcagcgcaa
    18661 tctccacctt gaagtaaaaa agcttctttt ttacaaactc ttgctaaaga cttttgaaga
    18721 tttctcactt ctccagcaaa aaccaaagga ggaagtttct caagtcttgc taaaactcta
    18781 ttcatttcct cttgatctgg atagataggt tgctgtttta taggatagtt tttccaagaa
    18841 ttcttagccc acatggtttt ttctttcgtt ttatttatca gcttcctcta taagttgaat
    18901 aaccaaaagg agaaagggtt attggaacat gataatgttt ctgatcttta gaaagctcaa
    18961 aacttacctc tacaaaagga taaaaagtat ttattttgtg tgatgtgtaa tagtcttttg
    19021 taaaaaattt aagcttataa attccaaaag ccctattttc agctttttca tatggtaata
    19081 aatctcctat tctaccattt tcttcggtaa attcttcact tacttttttc cactgttgat
    19141 ttgcttccaa cttataaagc tcaactttta ctttaggagc aggttgtcca gaagtaatat
    19201 ccaagacatg agtacttaat tgatattcag tagcactcaa aaacattggc acgcttgcta
    19261 gtattaataa agttttttta atagaaaaca ttttctctcc ttgtataata
//
LOCUS       DAPIYB010000026        18922 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.026, whole genome shotgun sequence.
ACCESSION   DAPIYB010000026 DAPIYB010000000
VERSION     DAPIYB010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18922
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.026"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            110..745
                     /locus_tag="RJ318_000723"
     CDS             110..745
                     /locus_tag="RJ318_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDV7430613.1"
                     /translation="MKIAILCASGKVGKEISKEALKRNLEPVCFVRNSSKMNEFLPQA
                     KIVQRDLFELDSKDLIDFDIIIDAFGEWENLSLHKKHIECLSVILQGSKAKLFVVGGA
                     GSLYMDENHTTRLMDMPDFPKEYLDIAKASAEVLEFLRNEKGFKWVYVSPSAIFSPDL
                     PKSNHYKIIGEKFEVNANNESKISYSDYASAMIDIVLNSCYENTRIGVISL"
     gene            complement(757..1060)
                     /locus_tag="RJ318_000724"
                     /pseudo
     CDS             complement(757..1060)
                     /locus_tag="RJ318_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002809523.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
     gene            1115..2617
                     /locus_tag="RJ318_000725"
     CDS             1115..2617
                     /locus_tag="RJ318_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HDV7430614.1"
                     /translation="MAKKKEIKLEDALWKSADKLRKNIDAAEYKHIVLGLIFLRYISD
                     SFMQKYEELLKEQDDGADPEDADEYLADNIFFVPEKSRYNYIRDNAKNPKIGKMLDEA
                     MDEIEKHNDTLKGVLPKVYAKDNLDSKCLGELIDLIGNIAFDTGKSTDVLGHVFEYFL
                     GEFALAEGKQGGQFYTPKCVVELLVTMLEPYKGRVFDPCCGSGGMFVQSEEFVKSHQG
                     RLDDISIYGQESNQTTYKLAKMNLAIRKIESSQVIWNNEGSFLNDAHKDLKADFIIAN
                     PPFNDSDWSGELLENDGRWKYGVPPASNANYAWIQHFLYHLSPNGGVAGFVLAKGALT
                     SNTTNEAAIRKALIEDDLIDCIVNLPAKLFLNTGIPASLWFIRRQKLPKTVKKTLFID
                     ARDLGTRINRRNKTLNKDDINQIANIYKAWKNGTDYEDIKGFCKSVSIDEIRELSYVL
                     TPGRYVGLADSDDEFDFDTRFNELLAKLKSQIKTEQELSEIILKNLEKIK"
     gene            2614..4080
                     /locus_tag="RJ318_000726"
     CDS             2614..4080
                     /locus_tag="RJ318_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDV7430615.1"
                     /translation="MIRTVMDFKFVLRLLEANQFENEVVEYKKNNKDFIVLGKNISAL
                     SNTAALLGIDKAYIIFGIEDGTLNIVGTNFKPKQEKKGNEELESWLHKVLKPNIEFKI
                     HEITEKEIRLVVFEIEATKISPIKFEEKAYIRIGSNRKELDKYPEKEKKLWQVLSGFS
                     FENEIAKSNLNIQDIYDLLDYSKCFDMLDISYDNYSSDEYIIEKLIEHGLVKNLNDSF
                     AITNLGAILFAKDLTKFKGLNRKRIRFIRYQGKNKIHTLEELEGRKGYAIGFQGLISY
                     IMQYVPKNEVIENAIRKDTTLYPEIAIRELVANAIIHQDFTINGRNPMIEMYSDRIEI
                     TNNGKSLIDIKRLIDMPSKSRNDKLANLMRIMGICEERGSGVDKVIDSVEAYQLPAPD
                     FINNEDYFQAILFSHMPLEDMTKQDRIRATYQHCCLKWASREAMTNASLRARFKIGDK
                     QHSKASKIISDTLEAGLIKQQDPENKSTKHVKYVPFFV"
     gene            4299..5441
                     /locus_tag="RJ318_000727"
     CDS             4299..5441
                     /locus_tag="RJ318_000727"
                     /inference="COORDINATES: protein motif:HMM:NF013579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDV7430616.1"
                     /translation="MNNWKKCKLGDIAEITMGQSPKSEFYNFDNIGMPFLQGNRTFGR
                     KYPYFDTYCTEYKKIAKKGEILFSVRAPVGDINFANNDICIGRGLCSMNAKNGENEFL
                     YYLLHNLRSVIINNESGSVFGSVNKNDLQTIEILLPLLEEQRQIATILSSIDDKIELL
                     HEQNKTLEELAQTLFLNWFKDREFNSTISDFISMQNGFAFKSKDFIDYGNNGVIKIKN
                     ISNGIVDIVNTDKISQNTINEVNNKFNINSGDILFAMTGAEIGKMGIVPSTNKKLWLN
                     QRVGMVKERFLGARFLAYIHLTSEFGYDYVINSATGSAQENISATDIENCPFVKLTSE
                     EIVSYSKQLNDFFEKIIFNLGEIQTLENMRDILIPKLLNGEIKITN"
     gene            5452..7218
                     /locus_tag="RJ318_000728"
     CDS             5452..7218
                     /locus_tag="RJ318_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7430617.1"
                     /translation="MNKYKFVKFQVKNFRSLLDITLNIDNNNINTICGENNIGKTNFL
                     RALNLFFNHNNGVEYNQNEDRPYHIQKGSTGGRKTELIGYFTKNNVTHILKVEFHKDK
                     IVYILNGKMVEWKVARDIVESFKLLFIEASNVNMPSVISAILENDALLALDNKRKKQS
                     EPLRTLKLFIEQSKKAIEDIEKDINIYLKQMLDFDNTLKDKEIKIRFAEFEKLRDVVK
                     TMTSVTLDDGNDHLMDHKGSGAQRIVLLSLMQYITDKITTDIIWAIDEPEAFLQPKLQ
                     KKIMEIFKNIVREKKQPIIMTTHSQYFVDFNNLVNTHLFKLTKEEKIYARKKGRVFQE
                     INTKPIYIGTAFEKLSVIKKHLGIETNDNWDIMPYNILVEGEEDKKYLQMLIEILNLS
                     MPNIIHSGGATKIAGFLEYFNNQCSYTSFKPYFICIFDNDEEGRKQYNKISKDNLYPN
                     IKLDAKKLKRYGESIQENNRDIWEIEDFMPIKIIVDAVNIILKYKQYNTITNSQISDR
                     KKLAFKNMSILDYLEKCIADRNEEKERFILNTESRKKEICQNAFRAREKYTKNDLEDY
                     HVDFMNELIDSFNKVDLIKKDN"
     gene            7221..10316
                     /locus_tag="RJ318_000729"
     CDS             7221..10316
                     /locus_tag="RJ318_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDV7430618.1"
                     /translation="MSKAKTSEFDLEQFVISSLLEHGWCYEKPVRATDEVLLETSLVN
                     ALCRLNPQLDLSKANEIYKELKSKNHLSLLDSNENFHYKLVNGVNINTTKDGESRADI
                     INLIDFNNASNNEFIATNQLSITEAKENKIPDVVLYINGIPLVLMELKSPSDENATIN
                     SAYNQINTYKQTIPSIFTYNAFCVISDGYFARAGSISADFSRFMAWKSSDGINYAPNK
                     SLEIKTLIDGMLNPKTLLDIICNFIVFEKEQIRDLNGILSIKTTKKIACYHQYYAVNK
                     AISRTITASSKDGDKKGGVVWHTQGSGKSLSMVFYSAKAIKALNNPTILLITDRNDLD
                     DQLFGTFASCANLLRQEPKQANDKEHLKELLRVASGGVVFTTIQKFSPENDNVFECLS
                     LRDNIIVIADEAHRTQYGFDAKVVEEKSKSGDVLGQKIVYGFAKYLRDALPNATYIGF
                     TGTPIESHDINTPAVFGNYIDIYDISRAVEDGATVSIYYESRLAKIELSEEGKRLVNE
                     LDEKLENQDSQKAKATKLEALVGSTSRLKQIAKDIVKHFETRSSKLGGKGMIVSISRS
                     VAIKLYDEIIKIRPSWHSDELSSGAIKVVMTSSSSDGVEFSKHHTSKIQKQFLANRMR
                     NIDDELKLVIVVDMWLTGFDVPSLHTLYIDKPMKGHNLMQAIARVNRVYKDKPSGLVV
                     DYLGIASDLKKALSFYSESGGKGDIITTQEDAVKVMIEKLEIVEQMLPNDYEKYFELD
                     TGAKLEYILDVEEHILSNEDGKNRFIKEFAALDKAYTIAMPHEKALSIKNKIAFMYAI
                     KARFLKFAKENENENLLNQALIKQVVDKAIVSSKVVDIFDASGIKKPDISILSDEFLL
                     EVKNMKRKNLAFEMLKKILNDEIKAREKLSLTKAKKLAQMLSDAIKKYNNKLISSSEA
                     LDELINMSKSIVSMEDEAKKLGLKDYEYAFYSALACNDEYEKILGNEKLLALVSEILQ
                     IIKNNVSIDWMIKENVRARLRVAVKRVLNKYGYPPDMQQLAIDGVLAQAEILAKELAN
                     E"
     gene            10544..11620
                     /locus_tag="RJ318_000730"
     CDS             10544..11620
                     /locus_tag="RJ318_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HDV7430619.1"
                     /translation="MQYKILENNRIASKGYAMLSKDAKFTPFEFSRHAIGDNDILIKI
                     LYAGICHSDIHTARSEWGEATYPCVPGHEIAGEVIAVGKNVSKFKVGDYAGVGCMVNS
                     CGECDACKRSQEQFCENGKTIFTYNSCDVFHGNENTYGGYSNNIVVSEKFAVCVPKDA
                     PMEKVAPLLCAGITTYSPLKFSNIKEGSSVAVAGFGGLGMMAVKYAVKMGAKVSVFAR
                     NENKKADALAMGVSSFYTSCDKNAVKERFDLIISTIPTPYNPAIYLDLLKFGGEMAIV
                     GLPPHEVAPSISVITFVHKAGKKVYGSLIGGIAETQEMLDFSLKHGIYPETELITPQE
                     IDKAYENLTSGKAKFRYVIDMTKE"
     gene            complement(11622..12071)
                     /locus_tag="RJ318_000731"
     CDS             complement(11622..12071)
                     /locus_tag="RJ318_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HDV7430620.1"
                     /translation="MLELIGELSLQNYMGEWLEIARKPAFFQKSCLNSKAKYELKYKN
                     GIPYVEIENFCSKKNEISSIKGKAKIVSNRQLAVRFNIFMNLFNKVNYEIIFVDSEYK
                     VAIVGSPDKKYLWILARNIIDEKNIKELLNIAKQRGFDISDVVFDKY"
     gene            complement(12059..12406)
                     /locus_tag="RJ318_000732"
     CDS             complement(12059..12406)
                     /locus_tag="RJ318_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDV7430621.1"
                     /translation="MTKENSPCNFEECGFNYTLALINGKYKMSILYCLFRYEIVRYNE
                     LKRFLSSISFKTLTNTLRELENDGLIIRKEYAQIPPKVEYSLSKRGQSLIPILQAMSK
                     WGKKDKKGKKCLN"
     gene            12506..13084
                     /locus_tag="RJ318_000733"
     CDS             12506..13084
                     /locus_tag="RJ318_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDV7430622.1"
                     /translation="MKNILLLNGAKEFGNSKGQLNLTLHNHALEILKTLGYEVDQTHI
                     DQGYDPKEEIQKFIKADAVIYQMPAWWMGEPWIVKKYIDEVFGLGAGVLFKNDGRTHE
                     NPSKNYGKGGLDHGKKYMFSLTWNAPLEAFNDKNEFFEGKGVDMVYWHLHKAHEFIGM
                     KALPTFMCNDVVKNPQVEKYLNEYELHLKKIF"
     gene            13117..14013
                     /locus_tag="RJ318_000734"
     CDS             13117..14013
                     /locus_tag="RJ318_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDV7430623.1"
                     /translation="MTRTKYLYILLVIAMFLWGSSWPTSKILANYTDTSIITFWRFFF
                     VVLGSFFVLNFLKIPLKIEKTALKWVLIAGVLNGLYAFVFFIAIKHGLAGKGGVLVTT
                     MIPIFSYLIFMIAIFFQKNKKSTHKITKSEILGLFLGLLSGFCLLNLGSLEDLFGKFN
                     ILFLTCSFIWALMAVFNHKAKGAHPLAINFYINLISILMFSWILFDVKSYEIFHFEFK
                     FWISMFVVAFLSTIIGTSIYYYGIHILGSVKANSFVLITPASALICSYFILDEVPNAL
                     TLLGCALAIGAIYFINIYGKKA"
     gene            complement(14010..14975)
                     /locus_tag="RJ318_000735"
     CDS             complement(14010..14975)
                     /locus_tag="RJ318_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDV7430624.1"
                     /translation="MSIKIIEASINSSLQDFGRKKFAKFGIARSGAMDEDALRMANIL
                     LGNKQDEAGIELCLKGGKYEFLDENYFVLSGAEFEAKLDNQKIKTCKVYQANKGDILE
                     LDLAKIGFRGYLCVAGGFEVKSFLNSKSSDAKMGAGVFEGRALQKDDILNTHNTFIPF
                     NLEARECENPLFKSPKEPIIRVILGTNEDAFTQKGIETFLNTTYKVGLKSDRMAIYAE
                     SSESIEHKNSADIISDPAVFGSIQVPKSGIPIILMAGRQSTGGYTKIATVIENDLSLL
                     AQAKLGSSFKFQSISMQEALELYKQREMKFKAMDQKINLDFENLI"
     gene            complement(14956..15696)
                     /gene="pxpB"
                     /locus_tag="RJ318_000736"
     CDS             complement(14956..15696)
                     /gene="pxpB"
                     /locus_tag="RJ318_000736"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HDV7430625.1"
                     /translation="MFSVHFSGSKALLLRFEQEISPQINAYVLSTEQRIQKALKEGEI
                     YGIDELVSAYASLLIYFNPCVLSLNSLLDFLEKIKKDIKLAEQNSSLCIEVPLCYDEE
                     FGLDLEFVCKHNQISKEELISLHTKPYYLVFMLGFMAGFPYLGGLDERLFTPRLSSPR
                     AKIEAGSVGIADKQTGVYPISSPGGWQIIARTPLEFFDKEDEKNPTLLKAGMFLKFKA
                     ISKDEFFDIQEQVAKKVYQKEIYEYKNH"
     gene            complement(15706..16473)
                     /locus_tag="RJ318_000737"
     CDS             complement(15706..16473)
                     /locus_tag="RJ318_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LamB/YcsF family protein"
                     /protein_id="HDV7430626.1"
                     /translation="MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPC
                     VMDETLNLAKQNGVCIGAHPSYPDLLGFGRRNMQISFEEAKNYALYQLGALFGFAKAK
                     GMKIQHFKAHGALYNMAAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLR
                     YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKA
                     DSICVHGDNAKALEFVKKIKENLKKEQIQICALENFI"
     gene            complement(16615..17424)
                     /locus_tag="RJ318_000738"
     CDS             complement(16615..17424)
                     /locus_tag="RJ318_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDV7430627.1"
                     /translation="MKKIISLALALALSASAAELKMATTTSTDNTGLLDALKPLYEKE
                     SGNTLKWVAVGTGAALKMGEDCNADVLFVHSPKAEKEFMKKGFGVDRTPVMYNDFIII
                     ADKSLASKFKGKNLKESLELIKNEKLTFISRGDKSGTDNKEKSLWKNLGGVPEKQSWY
                     QQSGQGMLASIKIAEEKKGVILTDRGTYIKYEANEKGKPNLVIVNEGDDSLKNFYSVI
                     ATNPKHCKNVNYTEASKFIKWVTSDKTLNFIADFKLLNKPLFVIDAKTRKD"
     gene            17503..18189
                     /locus_tag="RJ318_000739"
     CDS             17503..18189
                     /locus_tag="RJ318_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7430628.1"
                     /translation="MDYIFDGFKQALFLLFNADESVISAIKTTLLSSSISIVLALLIG
                     FPLGFILGFFEFKLKRFIKLIVDTSLSFPTVAVGLILYALISSRGPLGEFGLLFTIKA
                     LILGQFILALPIVIALFSNLIENMNKKHFLLIKSFHLSPLKLVLTMIYELRFALISVV
                     ALAYGRIVAEVGVAMIVGGNIKYDTRTITTAISLETNKGEFASGIALALVLILIAFCL
                     NFITHKLKRT"
     gene            18191..>18922
                     /locus_tag="RJ318_000740"
     CDS             18191..>18922
                     /locus_tag="RJ318_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7430629.1"
                     /translation="MIEISNLFFNYQNKEVLKIKNLKLDTSKISILMGANGSGKSTFL
                     RILKFLEGDFSKNISYFGNFKPNNKQKREIYLLFPEPILLNRSVRANFLFTLKTYGIK
                     EDIEERIKESLMFLNLDESFLSKHPNELSSGQSQKIAFAIALSVRAKYYLLDEPSAFL
                     DKNTTLLFKKTILKMHENFNTGFLIASHDKHFLDSLAQKKLYLHSGEILEFENTNVFE
                     LENQGVKFCNFIDFSNCKKYKDFKKP"
BASE COUNT         6805 a         2642 c         3215 g         6260 t
ORIGIN      
        1 aaaatagata ctatattata aaataatatc tacttgattt ttagtagtaa atatatttat
       61 aatttctaga ttgcattttt tatgtaaaaa tacttaaaaa ggagatatta tgaaaatagc
      121 aattttatgt gcaagcggta aagtaggcaa agaaatcagc aaagaagctt taaaaagaaa
      181 tttagagcca gtatgttttg tacgcaatag ctctaaaatg aatgaatttt tacctcaagc
      241 taaaatagta caaagagatc tttttgaact tgattctaaa gatctgatag attttgatat
      301 tattattgac gcttttggag aatgggaaaa tttaagctta cataaaaagc atatagaatg
      361 cttgagtgta attttacaag gaagtaaggc taaattattt gttgtagggg gtgctggaag
      421 tttgtatatg gatgagaatc atactacaag acttatggat atgcctgatt ttcctaaaga
      481 gtatttggat atagctaaag caagtgcgga agtattggaa tttttacgca atgaaaaagg
      541 ttttaaatgg gtatatgtga gcccatctgc tattttttca ccagatcttc caaaaagcaa
      601 tcattataaa atcataggcg aaaaatttga agtgaatgcc aacaatgaaa gtaaaatcag
      661 ctatagtgat tatgctagtg ctatgataga catagtgctt aattcttgct atgaaaacac
      721 acgcattggg gtaataagcc tataaataaa gatgccttat gcttttaagg catcttttat
      781 ttcttttaaa tacttatttt gaagttttaa attttcttct aaagaattta aaatctcttc
      841 gctagttctt aggatttttt cttcttttac atttggattt ttagcactta aatcataatt
      901 tctttcttca agttcttttt tgctaagcag ccaagaatta gcagtgattt ttcttttctt
      961 tgtagcattt tagaaattcc ttaaaatgtg cgtattctaa aggcttgttt ttagtaagct
     1021 tgtaaggtgg tataagctcg tagtaataca ccttatcatc atttgctttt aaaatactat
     1081 ttgttatact taataaaatt atttaaggat aaaaatggca aagaaaaaag aaataaaact
     1141 agaagatgcg ttatggaaaa gtgctgataa attacgcaaa aatatcgacg cagcagagta
     1201 taaacacata gttttaggac ttatattttt acgctacatt agcgatagct ttatgcaaaa
     1261 atacgaagag ttattaaaag aacaagatga tggagccgac ccagaagatg cagatgaata
     1321 cctagctgac aatatcttct tcgttccaga aaaatctcgc tacaactaca taagagataa
     1381 cgccaaaaat cccaaaatag gcaaaatgct agatgaagca atggacgaga tagaaaaaca
     1441 caacgatact ctaaaaggag ttttgccaaa agtctatgcc aaagataact tagatagtaa
     1501 atgcctaggc gaacttatag atcttatagg aaatatcgcc tttgacactg gtaaaagcac
     1561 cgatgtttta ggtcatgtat ttgagtattt tttaggtgaa tttgccctag ctgaaggcaa
     1621 acaaggcgga caattctaca ctccaaaatg cgtcgtagag ctcctagtaa ctatgcttga
     1681 gccatataaa ggcagagtgt ttgatccttg ctgtggaagt ggcggtatgt ttgttcaaag
     1741 cgaagagttt gtaaaatctc accaaggcag actagatgac atctcaatct atggtcaaga
     1801 gtcaaatcag actacctaca aactcgccaa aatgaaccta gccataagaa aaatcgaaag
     1861 ctcacaagtg atatggaaca acgaaggctc atttttaaac gacgctcata aagacttaaa
     1921 agccgatttt attatagcca atccaccatt taacgactcg gactggagcg gcgaactgtt
     1981 agaaaacgat ggcagatgga aatacggcgt cccaccagca agcaacgcca actacgcttg
     2041 gatacagcac tttttatatc atctatcacc aaacggcggt gtagcgggat ttgtcctagc
     2101 taaaggcgca cttacaagca acaccacaaa tgaagcagcc attagaaaag cacttattga
     2161 agatgatttg atagattgta tagtaaatct acccgcaaag ctgtttttaa atacaggtat
     2221 tcctgcatca ctttggttta taagacgcca aaagctacca aagacagtca aaaaaacgct
     2281 ttttatagat gcaagagatt taggaactag gataaataga cgcaacaaaa ccctaaacaa
     2341 agacgatata aaccaaatcg caaatattta taaagcatgg aaaaacggca ctgattatga
     2401 agacataaaa ggcttttgta aaagtgttag catagatgag ataagagagc tttcttatgt
     2461 gcttacccca gggcgttatg tggggcttgc tgatagtgat gatgagtttg attttgatac
     2521 tagatttaac gagcttttag caaagttaaa atcccaaatc aaaactgagc aagagctaag
     2581 tgaaattatc ttaaaaaact tagagaagat taaatgataa ggacggttat ggattttaaa
     2641 tttgtactaa gattgttaga agcaaaccaa tttgagaatg aagtggttga atataagaaa
     2701 aataataaag attttattgt attaggaaaa aatatttctg ctttgtcaaa tacagctgct
     2761 ttactgggta tagataaagc atatataatt tttggcattg aagatggtac gcttaatatt
     2821 gtcggtacaa attttaaacc aaaacaagaa aaaaagggaa atgaagagct tgaaagttgg
     2881 ttgcataaag ttttaaaacc taatatagaa tttaaaattc atgaaataac ggaaaaagaa
     2941 atcaggttgg tggtatttga aattgaggca actaagattt caccaataaa atttgaagaa
     3001 aaagcttata taaggatagg cagtaataga aaagaattgg ataaatatcc agaaaaagag
     3061 aaaaaattat ggcaagttct ttcaggcttt tcttttgaaa atgaaatagc taaatcaaat
     3121 ttaaatattc aagatatata tgatttattg gattacagta agtgttttga tatgttagat
     3181 atatcttacg ataattattc ttcagatgaa tatattattg aaaaattaat tgagcatggt
     3241 ttagttaaaa atttgaatga ttcttttgct attactaatt taggtgctat cttgtttgca
     3301 aaagatttaa caaaatttaa aggcttaaat agaaaaagaa ttagatttat aaggtatcaa
     3361 ggtaaaaaca aaattcatac attagaagaa ttagaaggta gaaaaggata tgctattggt
     3421 tttcaaggat tgatttcata tataatgcag tatgttccta aaaatgaagt gatagagaat
     3481 gcgataagaa aagatactac tttatatcca gaaatcgcaa taagggaact tgtagctaat
     3541 gcgataattc atcaagattt tacaataaat ggtagaaatc caatgattga aatgtatagc
     3601 gatagaatag aaataacaaa caatggaaaa tctcttatag atattaaacg attaatagac
     3661 atgccatcaa agtcacggaa tgataagttg gctaatttaa tgagaataat gggtatatgt
     3721 gaagaaaggg gttctggtgt ggataaggtt atagatagcg ttgaagctta tcaattgcca
     3781 gcaccagatt ttataaataa tgaagattat tttcaggcaa ttttattttc tcatatgccc
     3841 ttagaagata tgaccaaaca agatagaata agagctacat atcaacattg ttgtttaaaa
     3901 tgggcttcaa gagaagccat gacaaatgct agcttaagag ctagatttaa aataggtgat
     3961 aagcaacatt caaaagcttc aaaaataatt agcgatactt tagaggcagg tttgattaag
     4021 cagcaagatc cagaaaataa atctacaaaa catgttaaat atgttccatt ttttgtttag
     4081 gttttatgtc atgctttcgt caaaattatt taaaaatagc ttaaattata tatcacatag
     4141 ctttaaaata cgagctttta gcgttttttc ttctgtcatg ctttcgtcat tatcttttaa
     4201 accaagctta aacaaaggaa attccgaatt taaattctcg aatttatttc gtgtattttt
     4261 tggatttttt acgcaaataa attccaaggg attaagatat gaataattgg aaaaaatgta
     4321 agcttgggga tattgcagag ataacaatgg ggcaatctcc aaaatcagaa ttttataatt
     4381 ttgataatat aggtatgcca tttttacaag gcaataggac ttttggtagg aaatatcctt
     4441 attttgatac atattgcact gaatataaaa aaatagctaa aaagggtgag attttattta
     4501 gtgtgagagc tcctgtcgga gatattaatt tcgcaaacaa tgatatttgt atcggtaggg
     4561 gcttatgctc catgaatgca aaaaatggtg aaaatgaatt tttatattac ttattacaca
     4621 acttaagaag tgttattata aataatgagt ctggtagtgt ttttggctcg gtaaataaaa
     4681 atgatttaca aacaatagaa attttattac cgctattaga agagcaaagg caaattgcta
     4741 ctatcttaag tagtattgat gacaagatag aactactaca cgagcaaaac aaaaccctag
     4801 aagaactcgc ccaaactctt tttttaaatt ggtttaaaga tagagaattt aatagcacta
     4861 ttagtgattt tatatctatg caaaatggtt ttgcttttaa gagtaaagat tttatagatt
     4921 atggtaacaa tggagtaata aagataaaaa atatttcaaa tggaattgta gatattgtaa
     4981 atactgataa gataagccaa aatactataa atgaagttaa taacaaattt aatataaatt
     5041 ctggagatat tttatttgca atgactggtg ctgagatagg taaaatgggt atcgttccaa
     5101 gtacaaataa aaaattatgg ttaaatcagc gagtaggaat ggtaaaagaa aggtttttag
     5161 gagctaggtt tttagcatat atacatttaa cttctgaatt tggttatgac tatgttatca
     5221 attcagctac tggcagtgct caagaaaata taagtgcgac agatattgaa aattgtccat
     5281 ttgttaagct tacgagtgaa gagattgtga gttattctaa acaattaaat gatttttttg
     5341 aaaaaattat atttaatcta ggagaaattc aaaccctaga aaatatgcgt gatatactta
     5401 tcccaaaact cctaaatgga gaaataaaaa taactaacta aaggagaatg tgtgaataaa
     5461 tataagtttg taaaatttca ggttaaaaac tttcgttctt tattggatat tactttaaat
     5521 atagacaata ataatataaa tacaatttgc ggtgaaaata atattggaaa gactaatttt
     5581 ttgagagcct taaatttatt ttttaatcat aataatggtg tggagtataa tcaaaatgaa
     5641 gatagaccat atcatattca aaagggatca actggtggta gaaaaacaga attaataggc
     5701 tattttacaa aaaataatgt cacacatatt ttaaaagttg aatttcataa agataagatt
     5761 gtgtatatat taaatggaaa gatggttgaa tggaaagttg ctagagatat tgtagaaagt
     5821 tttaaacttt tatttataga agcaagtaat gtgaatatgc ctagcgtaat ttctgctatt
     5881 ttagaaaacg atgctttgtt agccttagat aataaacgaa aaaagcaaag tgagccttta
     5941 agaacattga aattattcat agaacaatca aagaaagcta tagaagatat agaaaaggat
     6001 attaatatat atttaaaaca aatgttagat tttgataaca ccttaaaaga caaggaaata
     6061 aaaattagat ttgccgaatt tgaaaaatta agagatgttg taaaaactat gacatctgtt
     6121 actttagacg atggaaatga ccacttaatg gatcataaag ggagtggtgc tcaaagaata
     6181 gtacttttat ctttaatgca atatattaca gataaaatta caacagatat aatatgggca
     6241 attgatgaac cagaagcatt tttgcagcca aaattacaaa aaaagattat ggaaatattt
     6301 aaaaatattg taagagagaa aaagcagcct ataattatga caacacattc tcaatacttt
     6361 gtagatttta ataatttagt caatactcat ttgtttaaat tgacaaaaga agaaaagatt
     6421 tatgctagaa aaaaaggtag agtatttcaa gaaattaaca caaaaccgat ttatataggc
     6481 actgcgtttg aaaagttatc tgttattaaa aaacatttag gtatagaaac caatgataat
     6541 tgggatatta tgccttataa tattttagtt gaaggagaag aagataagaa atatttgcaa
     6601 atgctaatag aaattttaaa tttatctatg ccaaatataa tacattctgg tggtgcaact
     6661 aaaatagcag gttttttaga atattttaat aatcagtgca gttatacttc ttttaaacca
     6721 tattttatat gtatttttga taacgatgaa gaaggtagaa aacaatacaa taaaatatca
     6781 aaagataatt tatatccaaa cataaagcta gatgcaaaaa aattaaaaag atatggagaa
     6841 tcgatacaag aaaataatag agatatttgg gagattgaag atttcatgcc tataaaaata
     6901 atagtagatg cagttaatat tatacttaag tataaacaat acaatacgat aacaaactct
     6961 cagataagtg atagaaaaaa actagcattt aaaaatatgt caattttgga ttatttagaa
     7021 aaatgtattg ctgatagaaa tgaagagaaa gaaagattta tattaaacac tgaatcaaga
     7081 aaaaaagaaa tttgccaaaa cgcatttagg gctcgtgaaa aatatacaaa aaatgattta
     7141 gaagattatc atgttgattt tatgaatgaa cttattgata gctttaacaa agtagatttg
     7201 ataaaaaagg ataactaaaa atgagcaagg cgaagactag tgagtttgat ttagagcagt
     7261 ttgttatatc atcactactt gagcatgggt ggtgctatga aaagcctgta agagccactg
     7321 atgaagtttt gctagaaact agccttgtaa atgcactttg taggctaaat ccacagcttg
     7381 atttatcaaa agctaatgaa atttataagg agctaaaaag caaaaatcat cttagccttt
     7441 tagatagcaa tgaaaacttt cattataagc ttgtaaatgg ggtaaatata aacactacaa
     7501 aagacggcga aagcagagct gatatcataa atctaattga ttttaataat gcaagcaaca
     7561 atgaatttat agcaacaaac cagctaagca tcacagaagc taaagaaaac aaaatccccg
     7621 atgtagtgct atatataaat ggaattccgc ttgttttaat ggagctaaaa agcccaagcg
     7681 atgaaaacgc cacgataaac tcagcttata atcaaataaa cacttataaa caaacaatcc
     7741 caagtatttt tacatataat gctttttgtg tgataagcga tgggtatttt gctagggcgg
     7801 ggagtatttc ggctgatttt tcaaggttta tggcgtggaa aagtagcgat gggataaact
     7861 acgctccaaa caagtcttta gaaattaaaa ccttaataga tggtatgcta aatccaaaaa
     7921 ccttgctaga tatcatttgc aatttcatag tttttgaaaa agagcaaata agagatttaa
     7981 atggtatttt aagtataaaa actaccaaaa aaatcgcttg ctatcatcaa tactacgcag
     8041 taaataaagc cattagtaga acaatcacag caagtagcaa agacggagat aaaaaaggtg
     8101 gcgtggtgtg gcatacgcaa ggtagtggga agtctttgtc tatggtgttt tatagtgcta
     8161 aagcgataaa ggctttaaat aatcctacga ttttgcttat cacggataga aatgatctag
     8221 atgatcagct ttttggtact tttgcaagtt gtgcgaacct tttaagacaa gagccaaaac
     8281 aagcaaacga taaagagcat ttaaaagagc ttttaagggt agctagtggt ggagtggtat
     8341 ttactactat tcaaaaattt agtccagaaa atgataatgt atttgagtgc ttatcgctta
     8401 gagataatat catcgtaatt gcagatgaag cacacagaac ccaatacggc tttgatgcaa
     8461 aagtagtaga agaaaagtca aaaagtggcg atgtgctagg gcaaaagata gtttatggtt
     8521 tcgcaaaata tctgcgtgat gctttgccaa atgctactta tataggattt acaggaacgc
     8581 caattgaaag ccatgatata aacacccctg cagtttttgg aaactacata gatatatatg
     8641 atatatcaag agctgttgaa gatggtgcta ctgtgagtat atattatgaa agcagacttg
     8701 ccaaaataga gctaagcgaa gaaggaaaaa ggcttgtaaa tgaattagat gaaaagcttg
     8761 aaaaccaaga tagccaaaaa gcaaaagcta ctaagctaga agctttagta ggtagcacaa
     8821 gcagactaaa acaaatcgct aaagatatag taaaacactt tgaaacaagg tctagtaagc
     8881 tcggcggaaa aggtatgata gtaagtataa gccgaagcgt agctataaaa ctatatgatg
     8941 aaatcataaa aataagacca agttggcata gcgatgagct aagtagcggg gctataaaag
     9001 tagtgatgac ttcaagctct agcgatgggg tagagtttag taaacatcat acaagtaaga
     9061 ttcaaaagca gtttttggca aatcgtatga gaaatataga cgatgaatta aaactagtta
     9121 tagtggtgga tatgtggcta actggctttg atgtgccatc gcttcatact ctttatatag
     9181 ataagcctat gaaagggcat aatctaatgc aagctatagc tagagtaaat agggtttata
     9241 aggataaacc tagtgggctt gtggtggatt atcttgggat tgcaagtgat ttgaaaaaag
     9301 ctttatcatt ttatagtgaa agtggtggca agggcgatat aatcactact caagaagacg
     9361 ctgtaaaagt gatgatagaa aagcttgaaa tcgtagaaca aatgctgcca aatgactatg
     9421 aaaaatactt tgaacttgat acgggggcta aacttgaata tatacttgat gtagaagagc
     9481 atatattatc aaatgaagat ggtaagaaca gatttataaa agaatttgca gcacttgata
     9541 aagcctacac gatagctatg ccacacgaaa aagctttgag cataaagaat aaaatcgctt
     9601 ttatgtatgc gataaaggct aggtttttaa agtttgctaa agaaaatgag aatgaaaatt
     9661 tgcttaatca agctttgata aagcaagtag tagataaagc tattgtatca tctaaagtgg
     9721 tggatatttt tgatgctagt ggtataaaaa agcctgatat atctatactt tctgatgagt
     9781 ttttactaga agtaaagaat atgaagcgta aaaatttagc ctttgaaatg ctaaaaaaga
     9841 tactaaatga tgagataaaa gcaagagaaa agctaagcct aacaaaggct aaaaaattag
     9901 cacaaatgct tagtgatgct atcaaaaaat ataacaataa gctaatctca tcaagcgagg
     9961 cactagatga gctaataaat atgagtaaaa gcatagtaag tatggaagat gaggctaaga
    10021 agttaggttt aaaagactat gaatacgcct tttactcagc acttgcttgt aatgatgagt
    10081 atgaaaagat tttaggcaat gaaaaactat tagcactcgt tagtgaaata ctgcaaatta
    10141 tcaaaaacaa tgtaagtata gactggatga taaaagaaaa tgtaagagca agattaagag
    10201 tagctgtaaa aagagtgtta aataagtatg gttatccacc tgatatgcaa caacttgcaa
    10261 ttgatggagt tttagctcaa gctgaaattt tggctaagga attagctaac gagtagaatt
    10321 taagcgatac tgaaattaaa tttgtttgta ttattttctt ttatctttat tatagatagc
    10381 ttgatttgtc gttgcaacta tgtctttgtt ataaaatttg cttaatttta tacaatttca
    10441 ctagtatcca gtatttatac taatttttaa aaaattattt tcactcttga cttatagcta
    10501 ctctaatgtt ttataattat aaaaaatcaa aaaaggagca aaaatgcaat acaaaatttt
    10561 agaaaacaat cgcatcgcaa gtaaaggcta tgcaatgctt agcaaggatg cgaaatttac
    10621 accctttgaa tttagccgcc atgctattgg cgataatgat attttgatta aaatcctata
    10681 tgcaggcatt tgtcatagcg atattcacac cgcaagaagc gagtggggag aagctactta
    10741 tccttgcgtg cctgggcatg agatagcagg agaagttatc gctgtgggta aaaatgtgag
    10801 taaatttaaa gtaggagatt acgcaggggt tggttgtatg gtaaattcat gcggtgagtg
    10861 cgatgcttgc aaacgctcac aagagcagtt ttgcgaaaat ggcaaaacca tctttactta
    10921 caatagttgt gatgtatttc atggcaatga aaacacttat gggggctact caaacaacat
    10981 agttgtaagt gaaaaatttg ccgtttgtgt gccaaaagat gcaccgatgg aaaaagtcgc
    11041 gcctttgctt tgtgcaggaa ttaccactta ttctccgctt aaattttcaa atatcaaaga
    11101 aggctcaagc gtagcagtag cgggatttgg cggacttggt atgatggcgg ttaaatatgc
    11161 tgtgaaaatg ggtgcaaagg ttagcgtttt tgctagaaat gaaaacaaaa aagccgatgc
    11221 tttggctatg ggtgtaagct cattttacac aagctgcgat aaaaacgctg taaaagaacg
    11281 ttttgattta atcatctcaa ccattccaac gccttataat cctgctattt atttggattt
    11341 gcttaaattt ggcggtgaaa tggcgatagt gggtttgcca cctcacgaag ttgctccaag
    11401 tatcagcgtg ataacctttg tacataaggc aggtaaaaag gtttatggct cgttaattgg
    11461 tggtattgct gaaactcaag aaatgcttga tttttcttta aaacacggaa tttatccaga
    11521 aaccgagctt attaccccac aagaaatcga taaagcttat gaaaatctaa cctcaggaaa
    11581 ggctaaattt cgctatgtca ttgatatgac aaaagaataa tttaatactt atcaaaaacc
    11641 acatcgctaa tgtcaaatcc cctttgctta gcgatgttta aaagctcttt tatatttttt
    11701 tcatctatta tatttcttgc taaaatccaa agatattttt tatcaggact acccacaatg
    11761 gcaactttat actcgctatc aacaaaaatg atttcataat ttactttatt aaaaaggttc
    11821 ataaagatgt taaatctcac tgctaattgc ctatttgaaa cgatttttgc cttacccttt
    11881 atacttgaaa tttcattttt tttactgcaa aaattctcaa tttctacata aggaatgcca
    11941 tttttgtatt taagctcgta ttttgccttt gaatttaggc aagatttttg aaaaaaggcc
    12001 ggttttctag ctatttcaag ccattctccc atataatttt gcaaagaaag ttcgccaatt
    12061 aattcaagca ttttttccct tttttgtctt tcttgcccca tttgctcata gcttgtaaaa
    12121 tgggaattaa actttgtcca cgtttggata agctatattc taccttgggt ggaatttgag
    12181 cgtattcttt tctgataatt aaaccatcgt tttctagttc tcttaaggta ttggttaaag
    12241 ttttaaaaga tatggagctt aaaaagcgtt tgagttcatt ataacgcacg atttcatagc
    12301 gaaataagca gtataaaata ctcattttat attttccatt aattaatgct agagtatagt
    12361 taaatccaca ttcttcgaaa ttgcacggag aattctcttt agtcatttaa cattccttta
    12421 gtatagtata ttactttatt ttctgtattg aaaatgatat tatgctaagt tataattgta
    12481 tcataaaatt taaaaaagga taaaaatgaa aaatatactc ttgcttaatg gtgctaaaga
    12541 atttggaaat tcaaaaggac aacttaattt gacattgcat aatcatgctt tagaaatttt
    12601 aaaaacacta ggatacgagg tagatcaaac tcacatagat caaggatatg atcctaaaga
    12661 agagatacaa aaatttataa aagctgatgc tgtgatctat caaatgccag cttggtggat
    12721 gggggagcct tggatagtta aaaaatatat cgatgaagtg tttggtttgg gtgctggagt
    12781 gctttttaaa aatgatggaa gaactcatga aaatcctagt aaaaactacg gaaaaggtgg
    12841 tttagatcat ggtaaaaaat acatgttttc tctcacttgg aatgcacctc ttgaagcctt
    12901 taatgataaa aatgaatttt ttgaaggaaa gggtgtagat atggtgtatt ggcatttgca
    12961 taaggctcat gaatttatag gtatgaaagc tttaccaact tttatgtgta atgatgtggt
    13021 aaaaaatcct caagtggaaa aatatctaaa cgagtatgaa ctacacttga aaaaaatttt
    13081 ttaaaaaatt tgacttaaaa atttcaaggt gtaacattga ctcgaacaaa gtatttgtat
    13141 atcttgcttg ttattgctat gtttttatgg ggctcatctt ggccaacatc taagatttta
    13201 gcaaattata cggatacttc tattattacc ttttggcgtt ttttctttgt tgtattgggt
    13261 tcattttttg ttttaaactt cttaaaaatt cctcttaaaa tcgaaaaaac tgccttaaaa
    13321 tgggtattga tagcaggagt tttaaatggg ctttatgcct ttgtattttt tattgctata
    13381 aagcacggct tggcaggcaa aggaggagtt ttagtaacca ctatgattcc tattttttct
    13441 tatttgatat ttatgatagc gatatttttt caaaaaaaca aaaaatcaac tcacaagatc
    13501 acaaagagtg aaattctagg cttattttta ggtttattat ctggattttg tttgctaaat
    13561 ttagggagtt tagaagattt atttggtaaa tttaatattt tatttttaac ttgttctttt
    13621 atttgggctt tgatggcagt gtttaatcat aaagccaaag gagctcaccc tttggcgatt
    13681 aacttttata ttaatctcat ttctatttta atgttttctt ggatattgtt tgatgtaaaa
    13741 agttatgaaa tttttcattt tgaatttaaa ttttggatca gtatgtttgt cgtggctttt
    13801 ttatcaacta ttataggaac tagtatttat tattatggga ttcacatttt aggaagcgtt
    13861 aaggcaaatt cttttgtttt aatcactcct gctagtgctt taatttgtag ttattttata
    13921 ctagatgagg tgccaaatgc acttaccttg ttaggttgtg ccttggctat aggtgctata
    13981 tattttatca atatttatgg caaaaaagct tagattaaat tttcaaaatc aagattgatt
    14041 ttttgatcca tagctttaaa tttcatttct ctttgtttat aaagttctaa ggcttcttgc
    14101 atgctaatgc tttgaaattt aaagctagaa cctaacttag cttgtgcgag taagcttaga
    14161 tcattttcta taaccgtggc tatttttgta tagcctcctg tgctttgtct tcctgccatt
    14221 aaaatgatag gaataccact ttttggcact tgtatacttc caaaaaccgc aggatctgag
    14281 atgatatctg ctgagttttt atgctctata ctttcactag attctgcata aattgccatt
    14341 ctatcgcttt ttaaacctac tttataagta gtatttaaaa aggtttctat gcctttttgg
    14401 gtaaaagcat cttcatttgt tcctaaaata acgcgtataa taggctcttt agggctttta
    14461 aaaagaggat tttcacattc tctagcttct aaattaaaag gtataaaagt attatgagta
    14521 tttaaaatat catctttttg caaagctctt ccttcaaaaa ctccagctcc cattttagca
    14581 tcactggatt tagagtttaa aaaacttttt acttcaaagc cacccgctac gcataaatac
    14641 ccacgaaaac ctatttttgc taaatcaagt tctaaaatat cgcctttatt tgcttgatat
    14701 actttgcaag ttttgatttt ttgattatca agctttgcct caaattcagc tccacttaaa
    14761 acaaaataat tctcatctaa aaattcgtat tttccaccct ttaaacaaag ctcaattcct
    14821 gcttcatctt gtttgtttcc aagcaagata tttgccattc ttaaagcatc ttcatccata
    14881 gctccacttc ttgctatgcc aaatttagca aatttttttc taccaaagtc ttgcaaactt
    14941 gaatttatag atgcttcaat gatttttata ctcataaatt tccttttgat agactttttt
    15001 agcaacttgc tcttggatat cgaaaaattc atcttttgaa atggctttaa attttaaaaa
    15061 catacccgct tttaaaagag tgggattttt ttcatcttct ttatcaaaaa attccaaagg
    15121 tgttctagca atgatttgcc aaccccctgg acttgatatg ggataaactc ctgtttgttt
    15181 atcggctata cctacacttc cagcttctat ttttgctcta gggcttgaaa ggcgtggggt
    15241 aaaaagtctt tcatctaaac ctccaagata aggaaaacct gccataaaac ctagcataaa
    15301 aacaagataa taaggtttag tgtgaagaga tataagctct tcttttgaaa tttgattgtg
    15361 tttgcacaca aattctaaat ccagcccaaa ttcttcatca taacaaagtg gaacttctat
    15421 acaaagactt gagttttgtt ctgcaagttt aatatccttt ttaatttttt ccaaaaaatc
    15481 aagcaaggaa tttaaagaaa gcacgcaagg attaaaatat ataagcaagc ttgcataagc
    15541 acttaccaac tcatcaatcc cataaatttc accttctttt agggcttttt gtatcctttg
    15601 ttctgtgctt aaaacatagg cattgatttg aggtgaaatt tcttgctcaa aacgcaaaag
    15661 caaagcttta cttccactaa aatgcacact aaacattgct aaaacttata taaaattttc
    15721 caaagcacaa atttgaattt gctctttttt taaattttct ttgatttttt taacaaattc
    15781 taaagctttt gcattatccc catgaacaca aatactatcg gcttttaaat caatttcttt
    15841 gccatttatg cttgtaactt tgctttcttt tatcattttt atcacgcgtt tgatagctaa
    15901 attttcatcg tgtattaacg ccccttctaa ttttcttgaa actaaagtgc catcatcatt
    15961 ataggcacga tctgcaaaaa cttcattagc atatcttaaa ccctttttct tagctgcttc
    16021 attcatagca gaattactaa gccctagaaa aataatattt tcatcaaaac tcgccactgc
    16081 ctcacaaagt gctaaggcta aattttcatc aatagctgcc atattataaa gcgccccatg
    16141 ggctttaaaa tgctgtattt tcataccttt tgccttagca aagccaaata aagctcctag
    16201 ttgatacaag gcatagtttt tagcctcttc aaagcttatt tgcatattgc gtcttccaaa
    16261 acccaaaaga tcaggataag atggatgtgc tcctatgcaa acaccatttt gcttggctaa
    16321 atttaaggtt tcatccatca cacaaggatc acccgcatga aagccacaag cgacatttac
    16381 tgaacttaca aattttaaaa tttcttcatc cattcccatt ttataggcgc caaaactttc
    16441 ccctaaatca ctatttaaat ccactttgaa cattatttga ccttgtatat ttaattattg
    16501 attttattat atctaaagaa gaattttaaa taagctaaaa gttttgaaaa ataaataaaa
    16561 aagttacaat aagtaaaaaa tgatatttta agcaggttaa aacctgctta atttttagtc
    16621 ttttcttgtt tttgcatcaa ttacaaataa aggtttatta agaagtttaa aatcagcaat
    16681 gaaatttaaa gtcttatcac ttgttaccca tttgataaat ttactagctt ctgtataatt
    16741 tacattttta caatgcttag gatttgtcgc tataacagaa taaaaatttt taagactatc
    16801 atcgccttca tttacaatga ctaagtttgg tttgcctttt tcattggctt catatttgat
    16861 ataagtacca cgatcggtta aaatcacacc ttttttttct tcagcgattt taatgcttgc
    16921 taacatacct tgtccgcttt gttgatacca gctttgcttt tcaggaacac cgccaagatt
    16981 tttccaaagg cttttttctt tattgtcagt gcctgattta tcgcctcttg agatgaaagt
    17041 aagcttttca tttttgataa gttctaagct ttcttttaaa tttttacctt taaatttaga
    17101 agctaaagat ttatctgcga tgatgataaa atcattatac atcacaggag ttctatctac
    17161 accaaagcct tttttcataa attctttttc agcctttgga gaatgcacaa aaagcacatc
    17221 agcattgcaa tcttcaccca tttttaaagc cgcacctgtt cctacggcaa cccattttaa
    17281 ggtattgcca ctttcttttt cataaagagg ttttagagca tctaaaagtc ctgtattgtc
    17341 agtgcttgtt gtagttgcca ttttaagttc tgctgcactt gcacttaaag ctaaagcaag
    17401 ggctaaagaa atgatttttt tcattttttt tccttataaa tttatataaa aaaatatttt
    17461 agcataatta tgctaaaatt acttatttta aaaaggatat ttttggatta tatttttgat
    17521 ggttttaaac aggctttatt tttacttttc aatgctgatg aaagcgtaat ttcagctata
    17581 aaaactacac ttttaagctc aagtatttct atagttttag ctttgcttat aggttttcct
    17641 ttgggattta tcttaggttt ttttgaattt aaattgaagc gttttataaa acttatagtt
    17701 gatactagcc tttcttttcc aacagttgca gtaggactta tactttatgc actgatttca
    17761 agtcgaggac ctttgggaga atttggattg ctttttacta taaaggcttt aattttaggg
    17821 cagtttatct tagcgcttcc tatagtgatc gcactttttt caaatttgat agaaaatatg
    17881 aataaaaaac attttttact tataaaatct tttcacctaa gtcctttaaa acttgtttta
    17941 acgatgattt atgaattacg ctttgctttg attagcgtcg ttgcactagc ttatggacgc
    18001 attgtagcag aagtaggagt agcgatgata gtaggtggaa atatcaaata cgatactaga
    18061 accataacca cagctatttc tcttgaaaca aacaaaggcg aatttgctag cggtatagct
    18121 ttggctttgg ttttaattct cattgccttt tgtttaaatt tcatcacgca caaactcaaa
    18181 agaacataaa atgatagaaa tttctaatct ttttttcaac tatcaaaaca aagaagtttt
    18241 aaaaatcaaa aatttaaaac ttgatacaag taaaattagc atcttaatgg gagcgaatgg
    18301 aagtggaaaa tctacatttt taagaatatt aaaattttta gaaggagatt tttcaaaaaa
    18361 tatttcttat tttggaaatt ttaaacctaa taataagcaa aagcgtgaaa tttatttgct
    18421 ttttccagag cctattttgt taaatcgtag tgtaagggca aattttttat ttaccttaaa
    18481 aacttatggg attaaagaag atattgaaga acgcataaaa gaaagtttga tgtttttaaa
    18541 tttagatgaa agttttttaa gtaaacatcc taatgaactt tcatcaggac aaagtcaaaa
    18601 aatagctttt gctatagctt taagcgtaag agcgaagtat tatttacttg atgaaccaag
    18661 tgcttttttg gataaaaata ctacactttt atttaaaaaa actattctta aaatgcatga
    18721 aaatttcaat acaggttttt taatcgcaag tcatgataaa cattttttag attctttggc
    18781 gcaaaaaaaa ctttatttgc acagtggaga aattttagaa tttgaaaata ctaatgtttt
    18841 tgaactagaa aatcaaggtg tgaaattttg taattttata gattttagta attgtaaaaa
    18901 atataaagat tttaaaaaac ct
//
LOCUS       DAPIYB010000027        18343 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.027, whole genome shotgun sequence.
ACCESSION   DAPIYB010000027 DAPIYB010000000
VERSION     DAPIYB010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18343
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.027"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            38..1406
                     /locus_tag="RJ318_000741"
                     /pseudo
     CDS             38..1406
                     /locus_tag="RJ318_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012006639.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            1548..2300
                     /gene="peb3"
                     /locus_tag="RJ318_000742"
     CDS             1548..2300
                     /gene="peb3"
                     /locus_tag="RJ318_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family glycoprotein adhesin PEB3"
                     /protein_id="HDV7430630.1"
                     /translation="MKKIITLFGACALAFSMANADVNLYGPGGPHTALKDIANKYSEK
                     TGVKVNVNFGPQATWFEKAKKDADILFGASDQSALAIASDFGKDFNVSKIKPLYFREA
                     IILTQKGNPLKIKGLKDLANKKVRIVVPEGAGKSNTSGTGVWEDMIGRTQDIKTIQNF
                     RNNIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVI
                     AKEGASKETQDFIAYLSSKEAKEIFKKYGWRE"
     gene            2397..3491
                     /locus_tag="RJ318_000743"
     CDS             2397..3491
                     /locus_tag="RJ318_000743"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDV7430631.1"
                     /translation="MKTFLVCALEPSANLHLKEVLKAYKKDFGEFELHGIYDESLCKE
                     FDLNSKPLYSSHEFSAMGFIEVLPLIFKAKKAIKELANLSFTQKINGILCIDSPAFNI
                     PFAKALKKAGSKIPRIYYILPQVWAWKKGRIPIIESHFDILASILPFDNQFFNKSTYI
                     GHPLLDEIKEFKNQEDINHTFSKKDDEKTIAFLPGSRRSEIRRLMPIFKELSQKFKGK
                     KILCVPSFNLEKLEVYGDISEFKIESNTPKVLKKADFAFICSGTATLEAALVGTPFVL
                     AYKAKAIDIFIAKLFVKLKHIGLANIFCDFAGKEALNPEFLQDKVNVLNLYEAYNKYD
                     YKAFFAKVDFLKEYLQFGSAKNLAKILNEI"
     gene            3503..3988
                     /gene="greA"
                     /locus_tag="RJ318_000744"
     CDS             3503..3988
                     /gene="greA"
                     /locus_tag="RJ318_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDV7430632.1"
                     /translation="MQKEPMSQFGYDKLAAELKDLKDNQRPAVVIEIDTARSHGDLKE
                     NAEYHAAREKQALIESRIAELSDLLARAQVIDPSSYEHDSVKFGSSVVIMDLDTEKES
                     KYTLVGICEGNLDKGYISIASPIAKAMLGKKEGDDFKVRLPKGESEFEILSINYEPLK
                     F"
     gene            4139..4756
                     /locus_tag="RJ318_000745"
     CDS             4139..4756
                     /locus_tag="RJ318_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDV7430633.1"
                     /translation="MLIGEISATHEFAKPYIELLEELALKIEIIYLEGNHDFNLSCFF
                     KRVKIFNLQEQPIKLNLHTSKGNNLVLNSAFIKLAHGDIFLPPLLQFTLKTLRNHYLL
                     VFLNFLNIITRNFISNKILQNQNKKNLFYQIKDFENLAKKRYEKYENLGFWVCEGHYH
                     QNHQINKENIKYLNLASFAYERSFFVVEYQQEIKFREQKLRGQNV"
     gene            4749..5705
                     /locus_tag="RJ318_000746"
     CDS             4749..5705
                     /locus_tag="RJ318_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HDV7430634.1"
                     /translation="MFDENIVKTGSNEMELVDFRIFKQGHDKVYEGIYGVNVSKVREI
                     IKIPSLTELPGVPDYIEGIFDLRGVVIPVVNLAKWMQITEPESTMLKPRVIITEFSNI
                     LIGFIVHEAKRIRRINWKDIEPATFSTGSGALDKGKITGVTRIENDEVLLILDLESVV
                     EDLGIYAPKTDIDFGKIEKFTGTALILDDSMTARKRVKEMMQQMGFQVVEAKDGVEGI
                     NKLEELSQIYGESLNDTLKIIVSDVEMPQMDGFHFAARIKEDPRFKDIPIVFNSSLSN
                     EFMNEKGVQEAGGEGYLVKFNASDFFNEIAKVIKKHQSQEQG"
     gene            5709..8018
                     /locus_tag="RJ318_000747"
     CDS             5709..8018
                     /locus_tag="RJ318_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDV7430635.1"
                     /translation="MEDMQEILEDFLVEAFELVEQIDHDLVELESNPEDLELLNRIFR
                     VAHTVKGSSSFLNFDVLTKLTHHMEDVLNKARHGELKITPDIMDVVLESIDRMKTLLN
                     SIRDNGNDTAIGMDIEPICARLTAISEGESPVVATDSNEKSTPQAELEAPKQEIATPE
                     PEVDVNQLSDSEVEAEIERLLKVRKAEDQARRAQKKQTTNAAPKPTNNTANKPTESGE
                     KKVPASGSNASSMDQTIRVEVKRLDHLMNLIGELVLGKNRLLKIYDDVEERYEGEKFL
                     EELNQVVSQLSIITTDVQLAVMKTRMQPIAKVFNKFPRVVRDLSRELGKQIELEITGE
                     ETELDKSIVEEIGDPIMHMIRNSCDHGVEDPATRAANGKPEKGIVQLKAYNEGNHIVV
                     EITDDGKGLDPNGLKAKAIEKNLITEREADQMTDKEAFALIFKPGFSTAAKVTNVSGR
                     GVGMDVVKTNIEKLNGVIEIDSELGKGSSFKLKIPLTLAIIQSLLVGTQEEFYAIPLA
                     SVLETVRVPIDDIYTIEGKNVLRLRDEVLSLVRLSDVFGVKQVLESGDQTYVVVIGVA
                     ESKLGIIVDTLVGQEEIVIKSMGDYLQNIQGIAGATIRGDGRVTLIIDVGAMMDMAKE
                     IKVDIKAQLESSAKKPKEQPSDYKVLIVDDSKMDRTLMQKALEPLGVSLIEATNGVEA
                     LNIIKSGEHDIDAMLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRG
                     VEVGMTEYITKPYSPEYLENVVRKNLKLG"
     gene            8023..8544
                     /locus_tag="RJ318_000748"
     CDS             8023..8544
                     /locus_tag="RJ318_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-binding chemotaxis protein CheW"
                     /protein_id="HDV7430636.1"
                     /translation="MSNEKLEQILQKQQTQMAGPDVDQREDDIIQLVGFVVGDEEYAI
                     PILNIQEIIKPIEYTRVPSVPDYVLGVFNMRGNVMPLIDLAQRFHLGSSKMTPQTRYI
                     VLRGETNGTGVGGNAGFVIDRLTEAIKIHRNRIDPPPETLVKDKGMIYGIGKRDENIL
                     TILKVEALLKREF"
     gene            8544..9167
                     /gene="serB"
                     /locus_tag="RJ318_000749"
     CDS             8544..9167
                     /gene="serB"
                     /locus_tag="RJ318_000749"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HDV7430637.1"
                     /translation="MIKLCVFDFDATLMDGETIDILATAHGKGNQTSEITRHAMTGEL
                     DFFESLQKRVSFLKGMSYKKVLELSSTLPLMRGAHELIQYLKSKNIQIVIFSGGFHEG
                     INPAMQKLGINLGFANYLHHKNDILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVM
                     CVGDGANDLAMFNESGLKIAFCAKEILRSQADICIDIKDLKEIIKVI"
     gene            9167..10144
                     /locus_tag="RJ318_000750"
     CDS             9167..10144
                     /locus_tag="RJ318_000750"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDV7430638.1"
                     /translation="MKNFSLWCDFIENSFLDNEFLNLLSHGINGATSNPAIFKNAILN
                     SPIYKDKILKLKEKKTKDIYEELAISDIQKAADKLAPLFYQKNDGFISIEIDPRLHDN
                     TTLSLGEAKRLYSAIGKENIMIKIPATKASYEVMYELMKNGISVNATLIFSLEQSQKC
                     FEALNAGLVEFRKNNIALKEQNTRTPQAVISIFVSRFDRLLNPKAKEQNRIGILNANL
                     AYNNIYSKNEPNIRALFASTGVKGDDLPKDYYIKELLFENSVNTAPLDAIEAFKGKMH
                     FKKPLMNFEIYTELNQIISQSEREKACNDLLSDGLEQFCIAFEDILKAL"
     gene            complement(10145..10567)
                     /locus_tag="RJ318_000751"
     CDS             complement(10145..10567)
                     /locus_tag="RJ318_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5 YciO YrdC YwlC family protein"
                     /protein_id="HDV7430639.1"
                     /translation="MIYLAQTDTTVGFLSKNLEEINALKGRDKNQPCLITSAKFCELK
                     SLARIPKSFKNLVRRSKKTTFIYPNNQAIRIVKECKHANFLSKNGYFYSSSANKHGKE
                     FDEEWARSVADIILDEKFFENIPSKILKLSKNKMIKIR"
     gene            complement(10564..13833)
                     /gene="carB"
                     /locus_tag="RJ318_000752"
     CDS             complement(10564..13833)
                     /gene="carB"
                     /locus_tag="RJ318_000752"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDV7430640.1"
                     /translation="MPKRTDIKSILLIGSGPIVIGQACEFDYSGTQAAKTLKELGYRV
                     VLINSNPATIMTDPEFADATYIEPITKESILSIIKKEKIDAILPTMGGQVALNVAMEV
                     YESGLLGDVKFLGANPEAIKKGEDRQVFKECMKKIGMDLPKSMYAYNYDEALKAVDEI
                     GFPLMIRASYTLGGAGSGVVYNMDEFKELTNTALALSPIHEILIEESLLGWKEYEMEV
                     IRDRADNCIIVCSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFAILREIGVD
                     TGGSNVQFAINPKNGRMIVIEMNPRVSRSSALASKATGYPIAKVATLLAVGFSLDEIK
                     NDITGTPASFEPVIDYIVTKIPRFTFEKFPGANTTLGTAMKSVGEVMAIGRTFKESIQ
                     KALCSLERSLSGFDRVKFEDRNDLVFKIRNANEKRLLYVAQAFREGFSVEELYELCKI
                     DPWFLTQIKEIVDFEEQIDMDILNNKALLRKAKTMGFSDKMIALLVNLKDNLELSQND
                     IYYVRMKQKIIAEFSEVDTCAGEFEALTPYLYSSINVSELTQSKNDAKDKKEKKVMII
                     GGGPNRIGQGIEFDYACVHASFALKDMGIKTIMYNCNPETVSTDYDTSDILYFEPIDF
                     EHLRAVIEREKPDGVIVHFGGQTPLKFAKRLSAFGAKIIGTSARVIDMAEDRKKFAEF
                     ITKLGINQPKNSTATSVEEAVLKASDIGYPVLVRPSYVLGGRAMRVVNDEAELRLYMQ
                     EAVDVSDKSPVLIDQFLDNATEIDVDAICDGKDVYVAGIMEHIEEAGIHSGDSACSLP
                     PCNIDEKMQEFIAQKTADIALNLGVVGLLNIQFALHNNELYMIEVNPRASRTIPFVSK
                     ATGIPLAKVATRVMWQGNLKEALKFYDTFKVVNFDTKILRPKTPKYMSVKEAVFPFAK
                     LSGSDLELGPEMRSTGEVMGISKDFANSYAKSQIASFNHLPEQGVVFISLKDKDKKYT
                     KKIAAEYVKLGFKLMATGGTCKEILESGFECELVHKISEGRPNVEDKLKNGEIHLVIN
                     TSDSHSFKGDTKKIRENIIRFKIPYFTNLRSALAGAKSIKAIQSKSCLDVKSLQEWLK
                     S"
     gene            complement(14094..14843)
                     /gene="mreC"
                     /locus_tag="RJ318_000753"
     CDS             complement(14094..14843)
                     /gene="mreC"
                     /locus_tag="RJ318_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDV7430641.1"
                     /translation="MKNKIFYVLVLAFLVFISFYYGGLIKQNVLRVNDFVIGNFYNIK
                     DYLGEKISEHFNQANQIQQLKARNKELEDIAVKVTSFANQLNRILEDQNSTKYLPQVS
                     LTRVISYVQLNDYKKLWLDWSKIPVGKNRGLIYQGYTAGIAINKNGRAMALLQGDDQC
                     VFSVYIGKSKAPGLIQGEDGRIVVKFIPKWAKINTGDEILTSGLDNIFFSDIPVGIVN
                     RVNDEDMYQSVEVKPYVKISIPAYLYVVDNL"
     gene            complement(14833..15873)
                     /locus_tag="RJ318_000754"
     CDS             complement(14833..15873)
                     /locus_tag="RJ318_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HDV7430642.1"
                     /translation="MILDQLIGFFSSDMGIDLGTANTLVLVKDKGIVINEPSVVAVER
                     ERYGSKAKILAVGKEAKDMVGKTPGNIEAIRPMKDGVIADFDMTEKMIRYFIEKTHRR
                     KSFLRPRIIISVPYGLTQVERKAVRESALSAGAREVFLIEEPMAAAIGASLPIQEPKG
                     NLVVDIGGGTTEIGVISLGGLVISKSIRTAGDKLDMSIVNYVKEKYNLIIGERTGEEI
                     KITIGSAIQLPKELSMVVKGRDQVSGLLSRIELTSEDVREAMREYLKEIADALKMVLE
                     MMPPDLASDIVENGVVLTGGGALIRGLDKYLSEIVRLPVYIADEPLLAVAKGTGKALE
                     EISLLQQLTNEE"
     gene            complement(15884..17107)
                     /gene="clpX"
                     /locus_tag="RJ318_000755"
     CDS             complement(15884..17107)
                     /gene="clpX"
                     /locus_tag="RJ318_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002936863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HDV7430643.1"
                     /translation="MPRKCSFCNEVENPQRRILANENDDAFICEYCVEGAYSIIYGEE
                     KEFKEPKQSHNTEFKDITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLFKAELQD
                     DDTELFKSNILLVGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILT
                     RLLQAADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVN
                     IPPKGGRKHPNQEFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDDAKEENKA
                     LLEKIEPDDLVHFGLIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAI
                     DGVNLKFEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYKNYDIVITKEV
                     VKDNAKALLIKRKIS"
     gene            complement(17100..17891)
                     /gene="lpxA"
                     /locus_tag="RJ318_000756"
     CDS             complement(17100..17891)
                     /gene="lpxA"
                     /locus_tag="RJ318_000756"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDV7430644.1"
                     /translation="MKKIHPSAVIEESAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGA
                     RILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKG
                     DGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFV
                     KVGEGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSRAFKTL
                     FRQGDLKENAKNLLENQESENVKKMCHFILETKRGIPVYRGKNNA"
     gene            complement(17891..18331)
                     /gene="fabZ"
                     /locus_tag="RJ318_000757"
     CDS             complement(17891..18331)
                     /gene="fabZ"
                     /locus_tag="RJ318_000757"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDV7430645.1"
                     /translation="MIDVMQIQEILPHRYPFLLVDKITELKVKEVVLGYKNISISDHV
                     FMGHFPGHPIYPGVLILEGMAQTGGVLAFESMEDKVDPKSKVVYFTGIDGAKFRNPVR
                     PGDRLDYEMSVVKNRGNMWIFKGQAFVDGNLVAEAELKAMIVDK"
BASE COUNT         6274 a         3088 c         2870 g         6111 t
ORIGIN      
        1 actataaaaa tataaagtta gtaaggatgg tttaaatatg tttgattttt tcaaacctaa
       61 ggcaaaagct attaaatttc ctctttagga aattttacct agatattaca aaatgagaac
      121 ttggagttta agtggggttt ttataggata tatgggatat tatcttgtgc gaaataatat
      181 cactctttca actccattta tacaaaatca acttaatctc agtaaatcag acatcggaac
      241 aatcacaggc tcaatgctta tagcttacgg gattagcaag ggtgcaatga gcgttataag
      301 cgacaaagct gatcctaaaa aatcatggct ttaggtctta ttttatgtgc tcttgtaaat
      361 gttttacttg gtttttcaaa ttctttttac gcttatgtag gttttgttat cgcgcttggg
      421 gtttttcaag gtatgggggt aggtccttct tttatcactc ttgcaaactg gtatcctaaa
      481 aaagagcggg gaatttacac ggccgtttgg aatatctcac ataatatagg aggcgggata
      541 gttgctccta tagtttcgct ttcaggtttt gctttggcag cattattggg tgtgagtatg
      601 gcaaatttta acgaaacata ttggcacatg aatcattttt atactcctgc tgcttgtgca
      661 gttatcatta gtctttatgc gctttatgca gttaaaggaa atcctaaaaa tgaaggtttg
      721 gttgatatta ctgaaatcaa tgaaatgcga gggattaaaa cagaagaaat caaagctata
      781 gaaactccaa atttaagcag ttttgaaatt ttttatcatt atgtacttaa aaacaaaaat
      841 gcttggtatg tggcttggat ggatactttt gtttatatgg tgcgttttgg gcttatttct
      901 tggcttccta tttacttgct agaaacaaaa ggctttaata aagaacaaat aggtattgcc
      961 ttttggcttt ttgaatgggc tgctatacct tctactttac ttgcaggata tatttcagat
     1021 aaaattttta aaggctatag aatgcctcct gctataggcg ccatggtgat tattttcttt
     1081 atgattattg gatattttac ttcaaataat ctttatatgg ttattttctt tgcagctatg
     1141 gcggggtgtt tagtctatat accacaattt ttagcaagta tgcaaactat ggaagtcgtt
     1201 cctgcttttg cagtaggatc ttgtgtagga cttcatggct ttatgagtta tgtagtcggc
     1261 gcttcacttg gaacaaaagc ataggttggg ctgtggatta ctatggtagt tggaatgctg
     1321 gtcttatcat gctccttagt gcttgtattc tttgtatact ttgttctact ttatgtcatt
     1381 ttagcgctaa aaagaagcat caataacaat tttaactttt gcttgcaaaa ataccaagca
     1441 aaagttagat tttaataata tttttgttac attataacta tttattaaca tacaatttct
     1501 aaaatcttac cttcaatcaa taaaaattta tcataaaagg aaatactatg aaaaaaatta
     1561 ttactttatt tggtgcatgt gccttagctt ttagtatggc aaatgcagat gtaaaccttt
     1621 acggaccagg tggcccacac acggccttaa aagatatagc aaacaaatat agcgaaaaaa
     1681 caggcgttaa agtaaatgta aattttggcc ctcaagcgac ttggtttgaa aaggctaaaa
     1741 aagatgcaga tattttattt ggcgcttcag atcaatcggc tttagctata gcgagtgatt
     1801 ttggaaaaga ttttaatgtg agtaaaatca agcctttata ttttagagaa gccatcatac
     1861 ttactcaaaa aggcaatcct ttaaaaatca aaggtttaaa agatttggct aataaaaaag
     1921 taagaatcgt tgtgcctgaa ggtgctggaa agagcaatac ttctggaact ggagtttggg
     1981 aagatatgat aggtagaact caagatataa aaaccataca aaattttaga aacaatatcg
     2041 tggcctttgt tccaaatagt ggaagtgcaa gaaagctttt cgcacaagat caagccgatg
     2101 cttggatcac ttggattgac tggtcaaaaa gcaatcctga cataggaact gccgtagcta
     2161 tagaaaaaga tttggttgtt tatagaactt ttaatgtgat agctaaagaa ggtgcgagca
     2221 aagaaacaca agattttatt gcttatttaa gttctaagga agctaaagaa atttttaaaa
     2281 aatacggctg gagagaataa accttcatac acgcttttta gcgtgtattc ttgcataact
     2341 tcttttaatt aagccaaaat aagataaaat gtttaaaata ttgataagga aattttttga
     2401 aaaccttttt agtttgtgct ttagagcctt cagcaaattt gcatttaaaa gaagttttaa
     2461 aagcttataa aaaagatttt ggtgaatttg aacttcatgg gatttatgat gagagtttat
     2521 gcaaagaatt tgatttaaat tctaaaccac tttatagctc acatgaattt agtgctatgg
     2581 gttttataga agttttacct ttgattttca aagcaaaaaa agctataaaa gaacttgcaa
     2641 atttaagctt tactcaaaaa ataaatggga ttttatgtat agattcaccc gcttttaaca
     2701 taccttttgc taaagcttta aaaaaagcag gcagtaaaat tccacgcatt tattatatct
     2761 tgcctcaagt ttgggcgtgg aaaaaaggtc gcatacctat catagaaagt cattttgata
     2821 ttttagcttc tattttgccc tttgataatc aattttttaa caaaagcacc tatataggcc
     2881 atccgctttt agatgagata aaagaattta aaaatcaaga agacattaat catacatttt
     2941 caaaaaaaga tgatgaaaaa actatagcct ttttaccagg ttcaaggcgt agtgaaatta
     3001 ggcgtttaat gcctattttt aaagaacttt ctcaaaaatt taagggtaaa aaaattcttt
     3061 gcgttccctc atttaatctt gaaaaattag aagtttatgg tgatattagc gaatttaaga
     3121 tagaaagtaa cactccaaaa gtgcttaaaa aagctgattt tgcctttatt tgtagtggaa
     3181 cagctacttt agaagcagct ttagtgggaa ctccttttgt tcttgcttat aaggcaaagg
     3241 ctatcgatat ttttatcgca aaactttttg taaaattaaa acatatagga cttgcaaata
     3301 ttttttgtga tttcgctgga aaagaagctt taaatcctga atttttacaa gataaagtca
     3361 atgttttaaa tttatatgaa gcttacaata aatatgatta taaggcattt tttgctaaag
     3421 ttgatttttt aaaagaatat ttacaatttg gaagtgctaa aaatttagca aaaatcctaa
     3481 acgaaatata aaaggataaa tcatgcaaaa agaaccaatg agtcaatttg gctatgataa
     3541 gttagccgca gaattaaaag atttaaaaga caatcaacgc cctgccgttg taatagaaat
     3601 cgatacagca agaagtcatg gggatttgaa agaaaatgct gaataccatg ctgcaagaga
     3661 aaagcaagct ttgatagaaa gtcgtattgc agagcttagt gacttgctag caagagctca
     3721 agtgatcgat ccttcaagct atgagcacga tagtgtgaaa tttggttcaa gtgttgtgat
     3781 catggatttg gatacagaaa aagaaagcaa atatactcta gtaggaattt gcgaaggaaa
     3841 tttagataag ggttatattt ccatcgcatc tccaatagca aaagctatgc ttggaaaaaa
     3901 agaaggagat gattttaaag tgcgtttgcc aaaaggtgaa agtgaatttg aaatcctttc
     3961 tataaattat gagcctttga aattttaagg ataaaaaatt ttactacaaa atggagcgat
     4021 tttaatcgca gatgctcatg aaaatgaaca aagaaaggga ttttgggaat ttttacaagc
     4081 cttaaaaaaa ggtaaaattt ccacccctca actcatactt ataggtgata ttttcgattt
     4141 gcttataggc gaaatctctg ctacacatga atttgctaaa ccttacatag aacttttaga
     4201 agaattggcc ttaaaaattg aaattatcta cttagaaggc aatcatgatt ttaatctttc
     4261 ttgttttttt aaaagggtaa aaatttttaa cttacaagag cagcccataa agcttaattt
     4321 gcatacaagt aaaggtaata atcttgtttt aaatagtgct tttataaaat tagctcacgg
     4381 agatattttt ttaccacctc ttttacaatt tactctgaaa acattaagaa atcattattt
     4441 gcttgtattt ttgaattttt taaatattat tactcgtaat tttatttcaa ataaaattct
     4501 tcaaaatcaa aacaaaaaaa acctttttta tcaaataaaa gattttgaaa atttagcgaa
     4561 aaaaagatat gaaaaatatg aaaatttagg attttgggta tgtgaaggac actatcatca
     4621 aaatcatcaa atcaacaaag aaaacattaa atatcttaac ttagctagtt ttgcatatga
     4681 gagaagtttt tttgtagtag aatatcagca agaaatcaaa tttcgagaac agaaattgag
     4741 gggtcaaaat gtttgatgaa aatatcgtga aaacgggttc aaatgaaatg gagcttgtcg
     4801 atttccgtat ctttaagcaa gggcacgata aagtctatga aggaatttat ggtgtaaatg
     4861 tttctaaggt aagggagatt ataaaaatcc caagccttac agaacttcca ggtgtacctg
     4921 attacatcga aggaatcttt gatcttcgtg gagtggttat acctgtagtc aatcttgcca
     4981 aatggatgca aatcactgag ccagaaagca ctatgctaaa acctagagtt attattactg
     5041 aatttagcaa tattcttatt ggttttatag ttcacgaagc aaaaagaatt cgtagaataa
     5101 actggaaaga tatagaacca gcaacttttt ctacaggatc aggtgcttta gataaaggta
     5161 aaattacagg tgtaacacgc attgaaaatg atgaagtgtt gctaatttta gatcttgaaa
     5221 gtgttgttga agatttagga atttacgctc caaaaacaga tatagatttt ggaaaaatag
     5281 aaaaatttac tggaacagca cttatacttg atgacagcat gactgctaga aaacgcgtca
     5341 aagaaatgat gcaacagatg ggctttcaag ttgttgaagc taaggacggc gtagagggca
     5401 taaacaaatt agaagaatta agccaaattt atggtgaaag tttaaacgat actttaaaaa
     5461 ttatagtaag cgatgtcgaa atgccacaaa tggatggttt ccactttgct gcacgcatta
     5521 aagaagatcc aagatttaaa gatattccta tagtctttaa ctcatcttta tcaaatgaat
     5581 ttatgaatga gaaaggtgtt caagaagctg gtggagaagg ctatcttgtc aaatttaacg
     5641 ctagcgattt cttcaatgaa attgcaaagg ttattaaaaa acatcaatct caagaacagg
     5701 ggtaaaatat ggaagatatg caagaaatac ttgaagactt tttggttgaa gcttttgagc
     5761 ttgttgagca aatcgaccat gatttagtag agcttgaatc aaatccagaa gatttagaat
     5821 tattaaatag aattttccgt gttgcacata cggttaaagg atcatcaagc ttcttaaatt
     5881 ttgatgtttt aacaaagtta actcaccaca tggaggatgt tttaaacaaa gcaagacatg
     5941 gcgagttaaa aataactcca gatatcatgg atgtggtttt agagtctatt gatagaatga
     6001 aaactttact taattccatt cgtgataatg gcaacgatac tgctattggt atggatatag
     6061 aaccaatttg cgcaagatta acagctattt cagagggaga gtctcctgtt gtggcaacag
     6121 attcaaatga aaaatctact ccacaagcag aactagaagc accaaaacaa gaaatagcta
     6181 ctccagaacc tgaagtagat gttaatcaat taagtgattc tgaagttgaa gctgaaatag
     6241 aaagactttt aaaagttaga aaagctgaag atcaagctcg tcgcgcacaa aagaaacaaa
     6301 caacaaatgc ggcacctaaa ccgactaaca atacagcaaa taaacctacg gaaagtggag
     6361 agaaaaaagt tcctgcttca ggtagtaatg ctagcagtat ggatcaaacc atacgcgtgg
     6421 aggtaaaaag attagatcac ttaatgaatc taattgggga gcttgtttta ggcaaaaacc
     6481 gtttgcttaa aatttacgat gatgttgaag agcgttatga aggagaaaaa ttccttgaag
     6541 aacttaatca ggttgtaagt caattaagta ttattacaac tgatgttcag cttgctgtga
     6601 tgaaaacaag aatgcaacct atagcaaaag ttttcaataa attcccaaga gttgttcgtg
     6661 atttaagtcg tgaattagga aagcaaatag aacttgaaat tacaggtgaa gaaactgaac
     6721 ttgataaatc tatcgtagag gaaattggcg atcctatcat gcatatgatt agaaattcat
     6781 gtgatcatgg tgttgaggat ccagcaactc gtgcagcgaa tggaaaacct gaaaaaggta
     6841 tagtccaact taaagcttat aatgagggca atcacatcgt tgtagaaatt acagatgacg
     6901 gtaaaggact tgatccaaat ggcttaaaag caaaagctat agagaaaaat ttgattaccg
     6961 aaagagaagc agatcaaatg acagacaaag aagcttttgc tttgattttc aagcctggtt
     7021 tttcaactgc ggctaaagta acaaatgttt caggtcgtgg cgtaggaatg gatgttgtta
     7081 aaaccaacat cgaaaaactt aatggggtaa ttgaaattga tagtgagtta ggtaaaggaa
     7141 gttcatttaa acttaaaatt cctcttacct tggcaatcat tcaatcttta cttgtaggaa
     7201 ctcaagagga attctatgca attccacttg caagcgttct tgaaacagtt agagtgccaa
     7261 ttgatgatat ctatactatc gaaggtaaaa atgtattacg cttaagagat gaagtgcttt
     7321 ctcttgtgag actttcagat gtatttggag ttaaacaagt ccttgaaagc ggtgatcaaa
     7381 cttatgtcgt tgttataggg gtagcagaaa gcaagcttgg tattatagta gatactcttg
     7441 taggacaaga agaaatagtt attaaatcca tgggtgatta tttacaaaat atccaaggta
     7501 tagcaggagc tacaatccgt ggtgatggta gggtgacatt aatcattgat gtaggtgcta
     7561 tgatggatat ggccaaagaa attaaagttg atattaaagc gcaattagaa tcaagtgcga
     7621 aaaaacctaa agaacaacca agtgattata aagtcttaat tgtagatgat tctaaaatgg
     7681 acagaacttt aatgcaaaaa gctttagaac cgctaggagt tagtttaatc gaagcaacaa
     7741 atggtgttga agcattgaat attataaaat ctggcgaaca tgatattgat gcaatgctta
     7801 tagatatcga aatgccaaga atggatggat acaccttagc tggtgaaatt agaaagtatt
     7861 ctaaatatcg caacttacca ttgatagcag ttacttcaag aacaagtaaa actgaccgtt
     7921 taagaggtgt tgaagtgggt atgactgaat atatcactaa accttattct ccagaatact
     7981 tggaaaatgt ggttagaaaa aatttgaaac taggataaga atatgagtaa tgaaaaatta
     8041 gagcaaattt tgcaaaaaca gcaaactcag atggctggtc ctgatgtcga tcaaagagaa
     8101 gatgatatca tccaacttgt tggctttgta gttggagatg aggaatatgc gattccaatt
     8161 cttaatatac aagaaatcat caaacctata gaatatacta gagttcctag tgtacctgat
     8221 tatgttctag gggtttttaa tatgcgtggt aatgttatgc cgctcattga tctagctcaa
     8281 cgctttcatt taggaagttc taaaatgaca cctcaaacaa gatatattgt tttaagaggt
     8341 gagacaaatg gaactggagt tggaggaaat gctggttttg ttatagatag attaactgaa
     8401 gcaattaaaa ttcacagaaa cagaatcgat ccaccacctg aaactttagt taaagacaaa
     8461 ggtatgattt atggtatagg aaaaagagat gaaaatatct taactatact caaagtagaa
     8521 gctttgctta agcgcgaatt ttaatgatta aactttgtgt ttttgacttt gatgctactt
     8581 taatggatgg tgaaaccatc gatattttag ctacagcgca tggcaagggt aatcaaacaa
     8641 gcgaaattac ccgccatgct atgactggag aacttgattt tttcgaaagt cttcaaaaac
     8701 gagtaagctt tttaaaaggt atgtcttata aaaaagtttt agaattaagt agcacacttc
     8761 cactaatgcg tggagcacat gaacttatcc aatatttaaa atctaaaaat atacaaattg
     8821 ttatttttag cggtggtttt catgaaggca taaatcctgc tatgcaaaaa cttggaatta
     8881 acctcggttt tgcaaattat ctgcatcata aaaatgacat tttaacaggg ctagttggtg
     8941 gggaaatgat gttttcaaat tcaaaaggct taatgctaca acgattaaaa agctttttaa
     9001 atttgaaaac agatgaagtg atgtgtgttg gcgatggggc aaatgatttg gcaatgttta
     9061 acgaaagtgg attaaagatt gcattttgtg ctaaagaaat tttacgttct caagctgata
     9121 tttgcataga tataaaagac ttaaaagaaa taataaaggt aatataatga aaaatttttc
     9181 tctttggtgt gattttatag aaaatagttt tttagataat gaatttttaa atttattatc
     9241 acatggaatt aatggcgcta cttcaaatcc tgctattttt aaaaatgcta ttttaaattc
     9301 tccaatttat aaagataaaa ttcttaaatt aaaagaaaaa aaaacaaaag atatttatga
     9361 agaattagca atttctgata ttcaaaaagc agctgataaa ttagctcctc ttttttatca
     9421 aaaaaatgat ggatttataa gtattgaaat agatccaaga cttcatgata acacaactct
     9481 tagtttaggt gaagctaaaa gactttatag tgctattggc aaagaaaata taatgattaa
     9541 aattccagct acaaaagctt cttatgaagt aatgtatgaa cttatgaaaa atggtattag
     9601 cgtcaatgct accttaattt tttctcttga acaaagtcaa aaatgttttg aagctttaaa
     9661 tgcaggttta gtcgaattta gaaaaaacaa tatagcctta aaagaacaaa acactagaac
     9721 accacaagct gttataagta tttttgtaag tcgttttgat agacttttaa atcctaaggc
     9781 taaggagcaa aatcgtattg gaattttaaa tgcaaattta gcttataaca atatctactc
     9841 aaaaaatgaa cctaatattc gtgccttgtt tgcaagcacc ggagttaaag gagatgatct
     9901 gccaaaagac tattatatca aagaacttct ttttgagaat tctgttaata ctgctcctct
     9961 tgatgcaata gaggcattta aaggaaaaat gcattttaaa aaacctttaa tgaattttga
    10021 aatttataca gaacttaatc aaatcatttc tcaaagtgaa cgagaaaaag cttgcaatga
    10081 tttattaagt gatggcctag agcaattttg tattgctttt gaagatattt taaaagctct
    10141 ttaattaacg tatttttatc attttattct ttgaaagttt taatattttt gatgggatat
    10201 tttcgaaaaa tttctcatca agtattatat cggcaacact tctagcccat tcttcatcaa
    10261 attcttttcc atgcttgttt gccgaagatg aataaaaata gccattttta cttaaaaaat
    10321 tcgcatgttt acactctttc acaatacgaa tggcctgatt attgggataa ataaaagttg
    10381 tttttttaga acgacgtact aaatttttaa aagattttgg aattcttgct aaacttttta
    10441 actcgcaaaa tttcgcagaa gtgattaagc aaggctgatt tttatctcta ccttttaaag
    10501 cattaatctc ttctaaattt ttacttaaaa atcctaccgt agtatctgtt tgagctaaat
    10561 aaatcaagat ttaagccact cttgcaaact ctttacatct aggcaagatt tactctgtat
    10621 agctttaatc gattttgcac ctgctaaagc tgatcgtaaa tttgtaaaat aaggtatttt
    10681 aaaacgaata atattttcac gaattttttt cgtatcgcct ttaaaactgt gactatcgct
    10741 tgtattgata actaagtgaa tttctccatt tttcaattta tcttcaacat tggggcgtcc
    10801 ttctgaaatt ttatgtacaa gttcgcactc aaaaccactt tctaaaattt ccttgcaagt
    10861 tccccctgtt gccataagct taaagccaag ctttacatat tctgcagcga tttttttggt
    10921 atatttttta tccttatctt ttaaggagat aaataccacg ccttgctctg gaagatgatt
    10981 aaacgatgca atttgacttt tcgcataaga atttgcaaaa tccttgctta tacccataac
    11041 ttcacccgtt gaacgcattt caggacctaa ttctaaatca cttccactaa gttttgcaaa
    11101 tggaaatact gcttctttca cgctcatata ttttggagtt ttagggcgta aaattttagt
    11161 atcaaaatta accactttaa aagtatcata aaattttaaa gcttctttta aatttccttg
    11221 ccacatcaca cgcgttgcca cttttgctaa aggaataccc gtagctttac taacaaaagg
    11281 tatggtacga ctagctctag gatttacctc tatcatataa agctcattat tatgtaaagc
    11341 aaattgtata tttaaaagtc ctacaactcc caaatttaaa gcaatatctg cggttttttg
    11401 tgcaataaat tcttgcattt tttcatcgat attgcaaggc ggcaaagaac aagcactgtc
    11461 acccgaatga attcctgctt cttctatgtg ctccataatt cctgcaacat aaacatcttt
    11521 gccatcacaa atcgcatcaa catcaatttc tgtagcattg tctaaaaact gatcgatcaa
    11581 aacagggctt ttatcgctta catccacagc ttcttgcata tagagtctaa gttcagcctc
    11641 atcatttacc acgcgcatcg cacgcccacc taaaacataa cttggtctta caagcacagg
    11701 ataccctata tcactagcct taagaaccgc ttcttctacg cttgttgcag tagaattttt
    11761 tggctgattg atacctagct ttgtaataaa ttcggcaaat ttctttctat cttctgccat
    11821 atcaattact cttgcgctag tacctataat cttagctcca aaagcactta aacgcttagc
    11881 aaatttcaaa ggagtttgtc caccaaaatg cacaatcact ccatcaggtt tttcacgctc
    11941 aatcaccgct cttaaatgtt cgaaatcaat aggctcgaaa tacaaaatat cacttgtatc
    12001 atagtcagtc gaaacggttt caggattaca attatacata atagttttaa tacccatatc
    12061 tttaagcgca aaagaagcat gtacgcaagc atagtcaaat tctatacctt gtcctatacg
    12121 gtttggcccc ccacctataa tcatcacttt tttttctttt ttatccttag catcgttttt
    12181 actttgagtg agttcgctta cattgatact tgaataaaga taaggagtta aggcttcaaa
    12241 ttcacccgca caagtatcca cttcactaaa ttctgcgatg attttttgct tcattcttac
    12301 ataataaata tcattttggc ttaattctaa attatctttc aaatttacaa gcaaggctat
    12361 cattttatct gaaaagccca tagtttttgc ttttctcaaa agagccttat tgtttaaaat
    12421 atccatatca atttgttctt caaaatctac aatttcttta atctgtgtta aaaaccaagg
    12481 atctatttta caaagctcat aaagttcttc tacgctaaaa ccttccctaa aagcttgagc
    12541 aacataaagt aaacgctttt cattggcatt gcgaatttta aaaacaagat catttctatc
    12601 ttcaaatttt accctatcaa aaccacttaa agaacgctca agcgaacaaa gtgctttttg
    12661 tatactttct ttaaaagtgc gtcctatagc cattacctca cccacacttt tcatagctgt
    12721 acctaaagtt gtatttgctc ctggaaattt ttcaaaggta aagcgaggaa tttttgttac
    12781 aatataatca atcacaggct cgaaagatgc aggagttcct gtaatatcat ttttaatctc
    12841 atctaagcta aaacctactg ccaaaagtgt cgcaaccttt gctataggat aacccgttgc
    12901 cttagaagct aaagcacttg atcttgaaac tcttggattc atttctataa ctatcattct
    12961 tccatttttt gggttgatag caaattgcac attacttccg cctgtatcta caccaatttc
    13021 acgcaaaata gcaaaagaag cattacgcat aacttgatat tctttatctg tcaaagttaa
    13081 tgctggagct attgtaatac tatctcctgt atgaactccc ataggatcga tattttctat
    13141 gctacaaact atgatacaat tatccgctct atcgcgtata acttccattt catattcttt
    13201 ccaacctaac aaactttctt caatcaaaat ttcatgaata ggtgataaag ctaaagcagt
    13261 attggtaagt tctttaaatt cgtccatatt gtaaaccaca ccacttccag caccccctaa
    13321 agtataagaa gcacggatca tcaaaggaaa gccgatttca tctacggctt ttaaagcttc
    13381 gtcataatta tacgcataca tcgattttgg caaatccatg ccaatttttt tcatacattc
    13441 tttaaaaacc tgacgatctt cgcctttttt aatcgcctca ggatttgcgc ctaaaaattt
    13501 cacatctcct aaaagtccgc tttcataaac ttccatagca acatttaacg ctacttgtcc
    13561 acccatagtt ggcaaaattg catcaatttt ttctttttta ataatactta aaatactttc
    13621 ttttgttatg ggttctatat aagtcgcatc tgcaaattcg ggatctgtca tgatggttgc
    13681 aggatttgag ttgattaata ctacacgata tcctaattct tttaaagtct ttgcggcttg
    13741 agttccagaa taatcaaatt cacaagcttg tcctatcaca ataggaccac ttcctataag
    13801 taaaatgctt ttaatatctg ttcgttttgg cataaatttt cctaagagca taaatttggg
    13861 ctgattataa caaaaattag ttttataaac tttgaaatta tcgatataat tttaaaaaat
    13921 aaacactctg cttttaatct aggaaataat acataaagaa atttaagatt ttttataaaa
    13981 ttctcattca attataaaca tttatttgat aatttaacaa aatttttagc attaaacaaa
    14041 gttataataa ttagcaaaaa tatagaaaat ttttaaaaag tctaatcctt gacttataaa
    14101 ttatcaacta catataaata agcaggaata ctaatcttaa cataaggctt tacttctaca
    14161 ctttgataca tatcttcatc attaactcta ttcacaatac cgacaggtat atctgaaaag
    14221 aaaatattat caagtccact tgttaaaatt tcatctccgg tattaatttt tgcccatttt
    14281 ggaataaatt taaccacaat cctgccatct tcaccctgga ttaaacctgg agctttggat
    14341 tttcctatat aaacagaaaa aacacactga tcatcacctt gtaaaagagc cattgctcta
    14401 ccatttttat taatagctat acctgcagta tatccttgat atatcaaacc acggttttta
    14461 ccaacgggaa ttttgctcca atctaaccat aattttttat aatcattcaa ttgaacataa
    14521 gaaataactc tagttaaaga aacttgaggt aaatattttg tagaattttg atcctctaaa
    14581 atacgattta attgatttgc aaaactagtt acctttacag caatatcttc taattcttta
    14641 tttctagctt ttagttgctg aatttgattt gcttgattaa agtgttctga aattttttct
    14701 cccaaataat ctttaatatt ataaaaatta cctataacaa aatcattaac acggagaaca
    14761 ttttgcttaa taagtcctcc ataataaaaa gatataaaaa ccaaaaaggc taagacaaga
    14821 acataaaaaa tcttattctt cattggttaa ttgttgcaat aatgaaattt cctctaaagc
    14881 tttacctgtt ccttttgcta cagctaaaag cggttcatct gcgatataaa ctggcaaacg
    14941 tacaatttca cttaagtatt tatcaagacc acgaatcaat gctccgccac ctgttaaaac
    15001 tacaccattt tctactatat cacttgctaa atcaggcggc atcatttcaa gaaccatttt
    15061 taaagcatca gcaatttctt ttaaatactc acgcatcgct tctcttacat cttcgcttgt
    15121 aagttcaata cgacttaaaa gtccacttac ttgatcgcgt ccttttacca ccatagaaag
    15181 ctcttttgga agttgtattg ctgaacctat ggtgattttg atctcttcgc ctgttctttc
    15241 acctatgata agattgtatt tttcttttac ataattaact atactcatat caagcttatc
    15301 tccagccgta cgaatagact ttgaaatcac aagtccaccc aaagaaatca ctccgatctc
    15361 agtagttcca ccccctatat ctactaccaa atttccttta ggttcttgta taggtaaact
    15421 tgcaccaata gctgctgcca taggctcttc gatcaaaaat acctctcttg cacctgcact
    15481 taaagcactt tctcttaccg cttttctttc tacttgagtt aaaccataag gaacagaaat
    15541 aataattcta gggcgtaaaa aactttttct acgatgtgtt ttttctataa aatagcggat
    15601 cattttttca gtcatatcaa aatctgcaat cacgccatct ttcataggac gaatagcttc
    15661 gatattgcct ggagtttttc ccaccatatc tttagcttct ttacctacgg ctaaaatttt
    15721 tgctttggaa ccataccttt ctctttcaac tgccacaaca gaaggctcgt ttatcactat
    15781 acccttatct tttaccaaaa ctagcgtatt agctgttcct aaatcaatcc ccatatcact
    15841 agaaaaaaat cctataagtt gatctaatat catttctatc cttttaactt atttttcttt
    15901 ttattaataa tgcctttgca ttgtctttaa caacttcttt ggttattaca atatcatagt
    15961 ttttatactc tggtaactca aacattaaat ctaccatcat ttcttctata atacttctaa
    16021 gccccctagc ccctgttttt ctctccaatg caagctgtgc gatagctctt agagcatctt
    16081 cttcaaattt taaatttacc ccatcaatag caaaaagctt ttgatattgc ttaataatgg
    16141 catttttagg ctcagttaaa attcttacca tatcttcttc attaagctca tttaaagatg
    16201 caatcacatg caaacgacct ataagctcag gaatcaaacc aaaatgcacc aaatcatcag
    16261 gttcaatttt ctcaagtaaa gctttatttt cttcttttgc atcatcaaaa aagcccacaa
    16321 ctttatcgcc aagttttctt tttaagatag tttccaaacc atcaaaagct ccaccacaaa
    16381 caaataaaat atttgaagtg tcaatttgta taaactcttg atttggatgt tttcttcccc
    16441 cttttggtgg aatatttacc aaacttcctt cgataatctt aagtaaagct tgttgcacac
    16501 cctctccact tacatcacga gtaatagaac gattttcact cattctagca attttatcaa
    16561 tctcatcaat aaaaactata cctttttgag ctctttgcac atctccatct gcagcttgta
    16621 aaagacgtgt taaaatattt tccacatcct cacctacata tcctgcttca gttaaagaag
    16681 ttgcatcaca aattgctata ggtacatcta aaaatttagc taaagtttgc gccaataaag
    16741 tttttccact tcctgttggc ccaacaagta aaatatttga cttaaaaagc tctgtatcat
    16801 catcttgaag ttcagcttta aaaagtcttt tataatgatt gtatactcca acactaaaaa
    16861 cttttttagc tctatcttgt cctatgacat aacgatctaa ataagctttt aattcttttg
    16921 gagtgatatc tttaaattct gtattatgac tttgtttagg ttctttaaat tctttttctt
    16981 ctccataaat aatactataa gcaccttcaa cgcaatattc acaaataaaa gcatcatcat
    17041 tttcatttgc taaaattctt ctttgtggat tctccacttc attgcaaaaa ctacattttc
    17101 taggcattat ttttacccct atagacagga attccacgct ttgtttctaa tataaaatga
    17161 cacatttttt taacattttc actttcttga ttttcaagca aatttttagc attttctttt
    17221 aagtctcctt gtctaaataa agttttaaaa gctctgctaa gtctatctac ttcatcttta
    17281 tcaaaacgac gacgaatacc tactaaattt aaacttctaa tacttgcacg atttccttct
    17341 gctaaacaaa acggtactat atcctgagaa agtgcacttg ctcctgctat catacaaccc
    17401 tcacctactt tgacaaattg atgaataggt gtaagcccgc ctacaactgt aaaatctcca
    17461 agctctacat gtcctgctaa agttgcatta ttagctaaaa taatattatt acctaaaaga
    17521 caatcatgag caatatgaca ataagccata ataaaagcat tatcgcctat acgagtaaaa
    17581 ccatctcctt tagctgtacc tgaatttatc gttgcaaatt ctctaatagt tgcatttttt
    17641 cctataacaa caccgctttt ttgctcttct ttataagata tgtcctgagg aatatcgcct
    17701 actatagcat aagaaaatac acgagaatga tcacctatag ttgtatctga aagaattcga
    17761 gcaccttgtt tgatgacaac attattacct attttagcat ctttgcttac ataggcataa
    17821 gcttctatta caacatcgtc accaagttgt gcactctctt caatcaccgc acttggatga
    17881 atttttttca ttatttatcc actatcatag ctttaagctc ggcctctgca actaaatttc
    17941 catctacaaa agcttgccct ttaaaaatcc acatattacc acgattttta accacgctca
    18001 tttcataatc aagcctatct ccaggacgca caggatttct aaattttgct ccatctatgc
    18061 ctgtgaaata aactacttta ctttttggat ccactttatc ttccatactt tcaaaagcta
    18121 aaactccacc tgtttgagcc ataccttcta aaatcaaaac tccaggataa ataggatgcc
    18181 ctggaaaatg tcccataaaa acatggtcac ttatactgat gtttttatat cctagcacca
    18241 cttctttaac ttttaattct gtaattttat ctactagtaa aaaaggataa cggtgtggta
    18301 agatttcttg aatttgcatt acatctatca ttattaaatt aac
//
LOCUS       DAPIYB010000028        18226 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.028, whole genome shotgun sequence.
ACCESSION   DAPIYB010000028 DAPIYB010000000
VERSION     DAPIYB010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18226
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.028"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..974
                     /locus_tag="RJ318_000758"
     CDS             <1..974
                     /locus_tag="RJ318_000758"
                     /inference="COORDINATES: protein motif:HMM:NF019310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7430646.1"
                     /translation="FNMEKSLLFHFRRIGVEFIIFSVYAVFSISWAATGSLMPLISND
                     LALNTQQATLITSMIVVAKIFGASFTAFLVYKFGLKKGYFLGCILMSSGIFLSFVDSY
                     SGILIIRFLTGLGSACALVCLVPIAQQWFEKKALHFVISFNITSNLVGITLGLVLAES
                     ISNYFGNWRDSLSFYAWINLILLILWLFVGKDENKKEEKKNNAKDLIYALKSRVTWGM
                     IIFYIGPILFLNSLFTFLPTFYAQYAGFSKELADFAKKEIPALANFAIIFGPYLGLFF
                     KRKNISFKIMLLSGGACIFICGFCMLFLQNLVLIQIFAVLSGIFYSM"
     gene            1041..1229
                     /locus_tag="RJ318_000759"
     CDS             1041..1229
                     /locus_tag="RJ318_000759"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430647.1"
                     /translation="MSAFWSITFVILSFNLWVVSWSVDKTHSFTLGFVYIFALIFISA
                     ILAQFVLPRREKFIQGEK"
     gene            1231..2382
                     /locus_tag="RJ318_000760"
     CDS             1231..2382
                     /locus_tag="RJ318_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDV7430648.1"
                     /translation="MNLIPEILDLQGEFEKIRHQIHENPELGFDELCTAKLVAQKLKE
                     FGYEVYEEIGKTGVVGVLKKGNSDKKIGLRADMDALPLQECTNLPYKSKKENVMHACG
                     HDGHTTSLLLAAKYLASQNFNGALNLYFQPAEEGLGGAKAMIEDGLFEKFDSDYVFGW
                     HNMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGHGSAPEKAKDPIYAASLLIVALQS
                     IVSRNVDPQNSAVVSIGAFNAGHAFNIIPDIATIKMSVRALDNETRKLTEEKIYKICK
                     GIAQANDIEIKINKNVVAPVTMNNDEAVDFASEVAKELFGEKNCEFNHRPLMASEDFG
                     FFCEMKKCAYAFLENENDIYLHNSSYVFNDKLLARAASYYAKLALKYLK"
     gene            complement(2386..3126)
                     /locus_tag="RJ318_000761"
     CDS             complement(2386..3126)
                     /locus_tag="RJ318_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaaA family protein"
                     /protein_id="HDV7430649.1"
                     /translation="MKILFSPSESKNENCVKNPINENSFIFKELFPYRMEALKHYEEF
                     IKNASLQNLQELFGIKNENEIDKFKHDLKQAPTQEAILLYTGVSYEYLNFKALDKKSQ
                     AYILENTLIFSNLFGIVRANDTLPFYKFKQGAKIGNFAIEKFYKEHFSKALDEYLENE
                     EILDLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKEL
                     LANLPSNLKLKEIQIKGLKEEIVLEILD"
     gene            complement(3218..4336)
                     /locus_tag="RJ318_000762"
     CDS             complement(3218..4336)
                     /locus_tag="RJ318_000762"
                     /inference="COORDINATES: protein motif:HMM:NF027978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="JlpA-like lipoprotein"
                     /protein_id="HDV7430650.1"
                     /translation="MKKGIFLSIGIAVLFSACGNSIDEKTVKKYENQLNQTVKQEIAS
                     LSQDSGIKIEFSDFKCNADGDFIACLSPNFKTLTKDNNDEYQELFQAKNIKIRSNEIY
                     KGEANASISIKEYYNDLFKNQKSIQSNLVFEDFKLGEKVVSDINASLFQQDPKISSFI
                     NKLSSDSYTLSFDNSINKQENNYLDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKG
                     IKFNTQTLVMDKQAINELLNIANYEQASDFSNTIQKYIILNNFKIDSTLKTEGVFSSY
                     IATAKENLQTLKAQSQNEEQALIFDKALAILNNITQNDDYKLNLDLKFKNIPVSDYST
                     QGIDSIEKLSINNQDATEALKIILPFIMFSMLMGGASF"
     gene            4555..5394
                     /locus_tag="RJ318_000763"
     CDS             4555..5394
                     /locus_tag="RJ318_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV7430651.1"
                     /translation="MKKILLSVLTAFVAVVLAACGGNSDSKTLNSLDKIKQNGVVRIG
                     VFGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKV
                     DIILANFTQTPQRAEQVDFCSPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTAD
                     AYFTQNYPNIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKDHPDFKMGIKELG
                     NKDVIAPAVKKGDKELKEFIDNLIIKLGQEQFFHKAYDETLKAHFGDDVKADDVVIEG
                     GKI"
     gene            5434..6681
                     /locus_tag="RJ318_000764"
     CDS             5434..6681
                     /locus_tag="RJ318_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7430652.1"
                     /translation="MQKKYKNIIYASLGGILEFYDFVLFAFFLDIFAKVFFPQNDAFW
                     MQINAYIAFGAAYLARPFGSIVMAHFADRYGRKNIFYISMLLMVLPSFALAFLPSYES
                     IGIFATLILFTIRILQGLAVGTEVSGAWIYVSEFVKGRQIPLALGFISATLTIGLLLG
                     NIATLGIRSYFTPEEVQSYAWRIPFIIGGFFGILALFLRNKLSETPEFIKVQNEKKIL
                     SFPLFEALKTHKMSMLVCFLMTMVLTSGVATLMILPKYFESLLAMSKTSALWVQNFAI
                     LAVIFGALFQGFLASKWGSYKICSIFSIAFIIFGMLFGFYDENFLFYFLLACFAQGII
                     TFAPVFMTQIFKSELKFSGLSFAYNISYAILGFLTPFIVNAFYKEYLGIYLAIVGSCS
                     LLCVFLLKRVFARSKIKELSIVF"
     gene            complement(6664..7932)
                     /locus_tag="RJ318_000765"
     CDS             complement(6664..7932)
                     /locus_tag="RJ318_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HDV7430653.1"
                     /translation="MQNVIENFKQLCKIPHCSYETEQMKEFLSSYAKDKGFKVSVDKA
                     GNIHAIKGKPKICLQSHYDMVCMGDAPNLEVYEENGFLRAKNSSLGADNGIGIAIMMS
                     AMAEFENLECLFTNDEEVGLMGVNLLEHTLESKMLLNLDHESDDEIMIGCAGGVDIEA
                     SLSFNTLRKKGKIYELCAQNFKGGHSGINIIRNEKSSIKEMAKFIQENEGEIISFEGG
                     ERINSIPKHAKALVHFKDEVKSNNWIKCEFKEENEFEICDQSKKLLSLINSFTHGVRA
                     YDENLDIVQTSINLATLRMQDNQIKFALFARSNILDGLKQVEFETLEFFKAFDFKIRS
                     FNFYPPWEGKPNALSDMVFKALKKVSPNAKVSAIHAGLECGIIEKKQELLCASIGPNI
                     HNPHSTDEHCEIASVEKISKVVFEVLKDNA"
     gene            8000..8527
                     /locus_tag="RJ318_000766"
     CDS             8000..8527
                     /locus_tag="RJ318_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDV7430654.1"
                     /translation="MRINYKKIFNLRKLLSDPKKLFSVLIFTLVVVFIQNYIAQNSSF
                     EGKVVRIIDGDTIEVNHENKLARIRFFGIDAPELKQSFGKQSKEALSRILSGKQVEII
                     YKNKDTYGRIVAIVKLNDVDINRFLVSKGYAWADTYYSNAYTKEQENAKKNHLGLWKE
                     SNPIEPYKWRKHNKF"
     gene            8536..8709
                     /locus_tag="RJ318_000767"
     CDS             8536..8709
                     /locus_tag="RJ318_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7430655.1"
                     /translation="MKKYTLMVLLVLGISGCFVNERGISNRFYDDCKEYYDGSGTYHK
                     DCPKNWVDIKMTP"
     gene            complement(8710..9288)
                     /locus_tag="RJ318_000768"
     CDS             complement(8710..9288)
                     /locus_tag="RJ318_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430656.1"
                     /translation="MAKKDNFEEYAQLEEYASAEDISRVRAELLTCPELNTSLAGTII
                     EIDKNYAKSILITTSEMVADDQGLIFDAFIFAAANYVAQASINKEFSVIIGSKCFFYA
                     PLKLGDVLELEAHALFDETSKKRDVKVVGHVKEVKMFEGTIQVVSTDEHIFKLKRPPL
                     NTVKPTENQEQGAKINNPEAVAAALMASVGGK"
     gene            complement(9361..10251)
                     /gene="cmoB"
                     /locus_tag="RJ318_000769"
     CDS             complement(9361..10251)
                     /gene="cmoB"
                     /locus_tag="RJ318_000769"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HDV7430657.1"
                     /translation="MSRIKMQENLLEKQFLNHPLYAKIQELKALNLACNFSLGDSVNL
                     STNSQAKDEILAIAKELKPWRKGPFKIDDLFIDTEWQSFIKFNILKPFMNEISQKCVA
                     DIGCNNGYYMFKMLEFNPAKLIGFDPSIKYRLQFELINALAKTPIKYELLGVEDLPSY
                     SLKFDVIFCLGVIYHRSDPIKMLKDLKAGLNKNGVVFLDTMYIEDEREIALVPNKTYS
                     KIPNIYFVPSISALKNWCERAGFKEFEVLATKKTDENEQRKTEWIDSFSLENFLDPKD
                     KNLTIEGYEAPKRVYIRIKI"
     gene            complement(10347..12071)
                     /locus_tag="RJ318_000770"
     CDS             complement(10347..12071)
                     /locus_tag="RJ318_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDV7430658.1"
                     /translation="MLEQSPYKEDANSKNYNNTLKVKDGVIIIDHSNTSDDNNSKTIN
                     TKKNTQKNQPNLSNDNTLKTKTPNSNTPSLKNTSKEESIHKVSFSFHITNKNINFKDL
                     GLDEQVLQEALNDYKKESISVQDLQDIANIISYYVQVSGYPAATAYIPQQELKDQIQI
                     NITLGVLGKYVVQNNSSVRDYAIESKLPNHKGEIITTKLVEDAVYKVNEMYGIQTLAS
                     LKAGDNPGETDVVIETTPSDSFVSVLFYGDNYGIKESGRYRDGASMSFNNIAHQGDSL
                     NAYLQRSDEAQTNYSISYTTFLGNLKITPSYSKRNYALGGAYKNANFIGTSENLGIDL
                     KYPLWITTYNSFYLTSSYYHKKLSNSRLNIMTIDKSSDTISFSIEGVYNGISNDSFSY
                     SANVSYGNVKDGGTTILGMSSKTDGDGFGKFAKLNVNLNNAYFFNDTFTHLFSLNYQQ
                     VVNGATLDSSETISLGDPYGVRAYNNGDGEGDNAVVASFGLRMATPLKDFYITPFYNI
                     GYSWYENDSKLYRASETNYMDAYGLQLLYNKTGNFYVKLDLARALKKYKLDDDYSSKA
                     YVSFGKYF"
     gene            complement(12129..12269)
                     /locus_tag="RJ318_000771"
     CDS             complement(12129..12269)
                     /locus_tag="RJ318_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430659.1"
                     /translation="MLKMIKIQKVKSLLDLVKKLKNKQSLKIKNQTNTKENLNKTHYL
                     TI"
     gene            complement(12257..13896)
                     /locus_tag="RJ318_000772"
                     /pseudo
     CDS             complement(12257..13896)
                     /locus_tag="RJ318_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002865998.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
     gene            complement(14265..16553)
                     /locus_tag="RJ318_000773"
     CDS             complement(14265..16553)
                     /locus_tag="RJ318_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430660.1"
                     /translation="MEKFCFKLSIVTFLSINAFAATQANTTDNRNFNIPEHYFNDNEL
                     YDKTNSTYKKLQGINYYAKSSKQYINNITLIYNNPKPNITNINDLNFKHYLLTPDMRE
                     DEVLSFKARHGVNTAGHSIKTVRVLPFLITAKTDHADASYNKLILEQGELSSVFYLKP
                     KDTHIKNPSNSKSNQRMNFLMSSTFTHYGNASYNQTILQKDAHISMGVENTYDLALNG
                     APYLIGAIATYGDSTNNSLNIEAGSSVEFFTSLPKKDKNGNNTFDERITHLVGGLAYQ
                     GNVKNNKIFIKDANMIIHGPSKAYASLAAAHISAGYIDSGTDKNFQASKNLLDIDGFN
                     LDMYTNHDKQPLAYNSVLFADFWGGKTEQGQALDNTINLKDIKNLKKDKNNENIFAQA
                     LFNFYAGASNNGEANYNTLNIELKHPLEIANNFLGYNQHSFYGGFATKGANHNTINIK
                     NDLTTTDLSQSYKDALNIVAARTLEGSADYNKVYINNSMSTLPVYIYTAKKNILNNQD
                     FYPSSANNNEVVIKDFASFRNLTVLTEAKEASYNTINYNNVQSITDVSNIDKGSKIII
                     RALDKANHNTIDIKNYSSNAADNAYLIMAYNEAAYNKIIINDTLFGVASDKREGILSI
                     IAGLSNNAHDNTLIINNLNLDEYKNNNSIFIAPSAITGLSEAKSYNNTLYIGGNLNIF
                     KNTFIDILAGALVHYEDNYSASNAAAPSDISLSKNNRLILNTKVEARIINNFEHYYLI
                     VSNKINTTPLLKSYDAPINISS"
     gene            16696..17070
                     /locus_tag="RJ318_000774"
     CDS             16696..17070
                     /locus_tag="RJ318_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDV7430661.1"
                     /translation="MKMRVYYEDTDAGGVVYHSNYLKFCERARSEIFFNKKVDIFDAS
                     KGHFLLAKANCNFLKPAKLGDMIEIKTKILEVKNASVEILQEIYKDEILLFKMELTLA
                     FIKNEKPARMDMQLKKLFEELF"
     gene            complement(17062..18213)
                     /locus_tag="RJ318_000775"
     CDS             complement(17062..18213)
                     /locus_tag="RJ318_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430662.1"
                     /translation="MLNAKEQKLVDVKPVENFYPKLSVQECNTNCLFDLLESRLYLSF
                     LSEFADQNDQFLSNVYAKLLNSITDFEKNVQKITSVKLAIIIPEKTIKSYSNTIINSS
                     IAYLLRQRAEIKVKVFLTGTEDNDKIRAALDAAQAQGYQYAIAGFTLKGANELKNYSG
                     NMKIFIPTIHKNNIQISNQNIIFGSIDYDAQIATLLSKSNANIAIFSDGSALSSNLNS
                     RILAQNNNARIYTIEGEKLDFSRLLRSQGGVNNASIFFNTPLIKTALASSQLRIYNIH
                     PYVLLSTQINYNPTFLSLTQQGDRENFIIANSINNHDDNLVYLNEIFNQSIDYNWIAY
                     ATSIGVDYFYTEFLNKKSESLFDEKIKNSQVDYKVRLMQGKQASFEELK"
BASE COUNT         5781 a         2532 c         2885 g         7028 t
ORIGIN      
        1 attttaatat ggaaaaatca cttttatttc attttagacg cattggagtt gaatttatca
       61 tttttagtgt ttatgctgtt tttagtatct cttgggcagc aacagggtct ttaatgcctt
      121 tgatttcaaa cgatcttgcc ctaaatactc agcaagctac tttaatcact agcatgatag
      181 tggttgcgaa aatttttggt gcttcattta ctgctttttt ggtttataaa ttcggattaa
      241 aaaagggata ttttttaggc tgtattttaa tgagttcggg tatattttta agttttgtag
      301 atagttatag tggtattttg attataagat ttttaacagg gcttggttca gcttgtgctt
      361 tagtttgctt agtgcctatt gcacagcaat ggttcgaaaa aaaagcttta cattttgtaa
      421 ttagttttaa cataacttca aatttagtag gcattaccct aggacttgtt ttagctgaaa
      481 gcatctcaaa ttattttgga aattggagag attctttatc attttatgct tggattaatt
      541 tgattttatt gattttgtgg ctttttgtag gtaaagatga gaataaaaaa gaagaaaaaa
      601 agaataatgc aaaagatctt atttatgctc taaaatctcg tgttacttgg ggtatgatta
      661 ttttttacat agggcctatt ttatttttaa attctctttt tactttttta ccaacttttt
      721 atgcacaata tgcaggtttt agtaaagaat tagctgattt tgctaaaaaa gaaattccag
      781 ccttggctaa ttttgctatt atttttggtc cttatcttgg attatttttt aaaagaaaaa
      841 atatttcttt taaaataatg ctattgtctg gaggagcgtg tatttttata tgcggatttt
      901 gtatgttatt tttacaaaat ttagtattga tacagatttt tgctgtgtta tcaggcattt
      961 tttattctat gtagtttcca tttttcttta atttaccttc agaactaaaa aattccaatc
     1021 caaatcaaac tgcttatatt atgagtgctt tttggagtat tacctttgtt atactatcat
     1081 ttaatctatg ggtagtatct tggagtgttg ataaaaccca tagttttact ttgggttttg
     1141 tttatatttt tgctttgatt tttatttcag cgatcttagc acaatttgtt ttacctagaa
     1201 gagaaaaatt tatacaagga gaaaaataga atgaatttaa ttccagaaat actagactta
     1261 caaggcgaat ttgaaaaaat tcgtcatcaa attcatgaaa atcctgagct tggttttgat
     1321 gaattatgta ctgcaaaatt agtggcgcaa aaattaaaag aatttggtta tgaggtttat
     1381 gaggaaatag gaaaaacagg cgttgtgggg gttttaaaaa agggaaatag cgataaaaaa
     1441 ataggacttc gtgcagatat ggatgctttg cctttacaag aatgcacaaa tttgccttat
     1501 aaaagcaaaa aagaaaatgt aatgcatgct tgtggtcatg atggacatac tacttcttta
     1561 ttgcttgctg caaaatattt agcaagtcag aattttaatg gcgctctaaa tctttatttt
     1621 caacctgctg aagagggttt gggtggtgct aaggcaatga tagaagatgg attgtttgaa
     1681 aaatttgata gtgattatgt ttttggatgg cacaatatgc cttttggtag cgataagaaa
     1741 ttttatctta aaaaaggtgc gatgatggct tcttcggata gttatagtat tgaagttatt
     1801 ggaaggggtg gtcatggaag tgctccagaa aaggcaaaag atcctattta tgctgcttct
     1861 ttgcttattg tggctttaca aagcatagta tctcgcaatg ttgatcctca aaattcagca
     1921 gttgtaagca taggagcttt taatgcagga catgctttta atatcattcc agatattgca
     1981 acgattaaaa tgagtgttag agcattagat aatgaaacta gaaagctaac tgaagaaaaa
     2041 atttataaaa tttgtaaagg tattgcgcag gctaatgata tagagattaa aatcaataaa
     2101 aatgttgttg caccagtgac tatgaataac gatgaagctg tggattttgc tagtgaggtt
     2161 gcaaaagaat tatttggcga aaaaaattgt gaatttaatc atcgtccttt aatggcaagt
     2221 gaggattttg gatttttttg cgaaatgaaa aaatgtgcct atgctttttt agaaaatgaa
     2281 aacgacattt atttacataa ttctagttat gtttttaatg ataagctttt agctagggct
     2341 gcaagttatt atgcgaagct agctttaaaa tacttaaaat aaaaactaat ctagaatttc
     2401 aagcacaatt tcttccttta aacctttgat ttgaatttct ttgagtttta ggtttgaagg
     2461 aaggtttgct aaaagctctt tattgttttt tacttggttt tttgcactta tggagagtaa
     2521 aattccccta taagctttag caaaatgact gatgacttta ccatttttta caaatttata
     2581 agtataaaat ttcttttttg gggtgtagaa tttatcataa aatcctgctc taaggtcaag
     2641 tatttcttca ttttctaagt attcatctaa ggctttacta aaatgttctt tataaaattt
     2701 ctctatggca aaatttccta ttttagcccc ttgcttgaat ttataaaagg gtagggtatc
     2761 attagctctt acaatgccaa aaagattaga aaatataaga gtattttcta aaatataagc
     2821 ttgacttttt ttatctaaag ctttaaaatt aagatattca taacttaccc cagtataaag
     2881 caatatagct tcttgggtgg gagcttgttt taagtcgtgt ttaaatttat caatttcatt
     2941 ttcattttta atgccaaaaa gttcttgtaa attctgtaaa cttgcgtttt tgataaattc
     3001 ttcataatgc tttaaagctt ccattctata aggaaataat tctttaaata taaatgagtt
     3061 ttcattgata ggatttttta cgcaattttc atttttactt tcgctagggg agaataaaat
     3121 tttcatttta gccttttttg ttaatattat gaaaacatta agagcaaaga atttaatctt
     3181 gcttttaatg tttttgaagt ttttatcatt ttaaaattta aaatgacgct ccgcccatta
     3241 acatagaaaa catgataaat ggaagtataa tttttaacgc ttctgtggcg tcttgattgt
     3301 tgatgcttag tttttctatg ctgtcgattc cctgtgtgct atagtcacta acagggatgt
     3361 ttttaaattt taaatcaaga ttgagtttat aatcatcatt ttgagtgata ttgtttaaaa
     3421 tagctaaagc tttatcaaag attaatgctt gttcttcatt ttgactttga gcttttaagg
     3481 tttgtaaatt ttccttagca gttgctatat agctactaaa tacgccttcg gttttaagag
     3541 ttgaatcaat tttaaaatta tttaagatga tgtatttttg gattgtattg ctaaaatctg
     3601 aagcttgttc gtagtttgct atattaagaa gttcattgat agcttgttta tccataacta
     3661 aagtttgagt gttaaatttt atacccttag aatcaaggta attaagcaaa tcttctttta
     3721 gatttatatt tagatttgta ttgaaattta attttgcgtt ataaaatttt atatcaagat
     3781 tatctagata attgttttct tgtttgttta tggagttatc aaatgataaa gtataagaat
     3841 ccgagcttaa tttattgata aaagagctga tttttggatc ttgttgaaat aagcttgcat
     3901 tgatgtcact aacaactttt tctccaagtt taaaatcttc aaaaaccaaa tttgattgta
     3961 tgcttttttg gtttttaaaa agatcgttgt aatattcttt aatgctaatt gatgcatttg
     4021 cttcgccttt gtaaatttca tttgagcgaa ttttgatatt ttttgcttga aatagttctt
     4081 gatactcatc gttattatct tttgtaagag ttttaaaatt tggacttaaa cacgctataa
     4141 aatcaccatc tgcattgcat ttaaaatcag aaaattcaat ctttattcca gaatcctgag
     4201 aaaggcttgc aatttcttgt ttaactgttt gatttagttg attttcatat tttttaactg
     4261 ttttttcatc tatggaattt ccgcaagctg aaaacaaaac agctattcca atagagagaa
     4321 aaataccttt tttcatagtt ttctccttaa aaatttaaaa aaagattata tcttttttta
     4381 cttaaaattt aaacaatgct aaaagagagt gtgagattaa ttacattttt acacatagga
     4441 aaatcttttt agtttgtttc aaatgcatta tttataattt taagtataat taactttgca
     4501 attattatat atttttgcaa tagctttaag cttattttta aagaaaggaa atgtatgaaa
     4561 aaaatacttc taagtgtttt aacggccttt gttgcagtag tattggctgc ttgtggagga
     4621 aattctgact ctaaaacttt aaattctctt gataagatca agcaaaatgg agttgttagg
     4681 attggggtat ttggcgataa accacctttt ggttatgtgg atgaaaaagg aaacaatcaa
     4741 ggctatgata tagctttagc taaacgcata gcaaaagaac tttttggcga tgaaaataag
     4801 gtgcaatttg ttcttgttga agctgcaaat agggttgagt ttttaaaatc aaataaagta
     4861 gatattattt tggctaattt tactcaaact ccgcaaaggg cagagcaggt tgatttttgc
     4921 tcgccttata tgaaggtagc tttaggcgta gctgtaccaa aggatagtaa tataactagc
     4981 gtagaagatt taaaagataa aaccttgctt ttaaacaaag gcacaacagc agatgcttat
     5041 tttacgcaaa attatcctaa tattaaaact ttaaaatatg atcaaaatac cgaaaccttt
     5101 gccgctttga tggataaaag aggcgatgct ttaagtcatg ataatacctt actttttgct
     5161 tgggtgaaag atcatcctga ttttaaaatg ggtattaaag agttaggtaa caaagatgtt
     5221 atcgcaccag cggttaaaaa aggcgataaa gaacttaaag aatttatcga taatttgatc
     5281 atcaaactag gccaagagca gttttttcac aaggcttatg atgaaacttt aaaagctcat
     5341 tttggagatg atgttaaggc cgatgatgta gtgattgaag gtggaaaaat ttaataaagg
     5401 gctttttgcc ctttagttga tttaggataa aatatgcaaa aaaaatacaa aaatattatt
     5461 tatgcttctt tgggtggaat tttagaattt tatgattttg tgctttttgc cttttttttg
     5521 gatatttttg ctaaggtatt ctttccgcaa aatgatgctt tttggatgca gataaatgct
     5581 tatatagcct ttggtgctgc ttatttagcg cgtccttttg gttctattgt gatggcacat
     5641 tttgctgata gatatggaag aaagaatatt ttttatattt ctatgctttt gatggttttg
     5701 cctagttttg ctttagcttt tttaccaagt tatgaaagta taggtatatt tgctactttg
     5761 attttattta ctattcgtat tttgcaaggt ttagccgttg gaactgaggt gagcggagct
     5821 tggatttatg tgagcgaatt tgttaaaggg cgtcaaattc ctttggctct tggttttatt
     5881 tcagcgactt taaccatagg tttattgcta ggaaatattg ccactttggg cataagatct
     5941 tattttaccc cagaagaagt tcaaagctat gcttggagaa ttccttttat cataggagga
     6001 ttttttggaa ttttagcttt gtttttaaga aataaactca gcgaaactcc agaatttata
     6061 aaagttcaaa atgaaaagaa aattttaagt tttccattgt ttgaagcttt gaaaactcat
     6121 aaaatgagta tgcttgtttg ttttttaatg accatggttt taacaagcgg tgtggcaact
     6181 ttgatgattt tgcctaagta ttttgaaagt cttttagcta tgagtaaaac ttctgcttta
     6241 tgggtgcaaa attttgctat tttagcggtg atttttggag ctttatttca aggtttttta
     6301 gcaagcaaat ggggaagcta taaaatttgc tctattttta gtatagcttt tattatcttt
     6361 ggtatgcttt ttggttttta tgatgagaat tttttatttt attttttact ggcttgtttt
     6421 gcacaaggta ttattacttt cgcgcctgtt tttatgacgc aaatttttaa aagcgaactt
     6481 aaatttagcg ggcttagttt tgcttataat atttcttatg cgattttagg ttttttaacc
     6541 ccttttatag ttaatgcttt ttataaagag tatttaggta tttatcttgc tatagtggga
     6601 tcttgctcct tgctttgcgt gtttttgtta aaacgcgttt ttgcaagaag taagattaaa
     6661 gaattaagca ttgtctttta aaacttcaaa aacaacctta gatatttttt caactgaagc
     6721 gatttcacaa tgctcatcag ttgaatgagg attatggata tttgggccta tagaagcgca
     6781 taaaagctct tgttttttct ctataatgcc acactcaagc cctgcatgga tagctgaaac
     6841 tttggcatta ggcgatactt ttttaagtgc tttaaaaacc atgtcgctaa gtgcgtttgg
     6901 tttaccttcc caaggtggat agaaattaaa acttcttatt ttaaaatcaa aagctttgaa
     6961 aaattctaaa gtttcaaatt ctacttgctt aagtccatca agtatattag atcttgcaaa
     7021 aagtgcgaat ttgatttggt tatcttgcat tcttaaagta gctaggttaa tgcttgtttg
     7081 aactatatct agattttcat cataagctct aactccatga gtgaaagaat ttataaggct
     7141 taaaagtttt ttactttgat cgcaaatttc aaattcattt tcttctttaa attcgcattt
     7201 tatccagtta ttactcttta cttcatcttt aaaatgcact aaagctttgg cgtgtttagg
     7261 tatagaattg attctttctc cgccttcaaa agaaatgatt tctccttcat tttcttgtat
     7321 gaatttagcc atttctttga tggaactttt ttcattgcgt atgatattta tgcctgagtg
     7381 tccaccttta aaattttgcg cacaaagctc gtaaatttta cccttttttc taagggtatt
     7441 aaaagacaaa cttgcttcta tatctactcc acctgcacag cctatcatga tctcatcatc
     7501 gctttcatga tctaaattta aaagcatttt agattctaaa gtgtgctcga gtaaattcac
     7561 tcccatgagt cctacttctt catcgtttgt aaaaagacat tctaaatttt caaattcagc
     7621 catagcactc atcatgatgg ctatacctat gccattatct gcaccaagac ttgaattttt
     7681 ggctcttaaa aagccatttt cttcataaac ttctaagttt ggtgcatcgc ccatacagac
     7741 catatcataa tggctttgta gacaaatttt tggtttgcct tttatggcat ggatatttcc
     7801 tgccttatct acactcacct taaagccttt atctttggcg taagagctta aaaattcttt
     7861 catttgttct gtttcataac tgcaatgagg aattttgcat aattgtttaa aattttctat
     7921 aacattttgc attttatctc ctttgttttg ataaaattat ggcatatttt ttaaaattta
     7981 aaggcaaaat gattaaaaaa tgagaataaa ttataaaaaa atatttaatc tgagaaaatt
     8041 actaagtgat ccaaaaaaac ttttttctgt attaatcttc actcttgtag ttgtttttat
     8101 ccagaactat attgcccaaa attctagttt tgaaggaaaa gtagttagaa ttattgatgg
     8161 agatactata gaagttaatc atgaaaacaa actcgctaga ataagatttt tcggtataga
     8221 tgcaccagaa cttaaacaaa gttttggaaa gcagtcaaaa gaagctttaa gtagaatttt
     8281 aagtggcaaa caagttgaaa ttatttataa aaataaagat acttatggta gaattgttgc
     8341 tattgtaaag cttaatgatg ttgatattaa tcgatttttg gtaagcaaag gctatgcttg
     8401 ggctgatact tactatagta acgcttatac caaagaacaa gaaaatgcta agaaaaatca
     8461 tttaggtctt tggaaagaga gtaatcctat agagccttat aaatggagaa aacacaataa
     8521 attctaagga aaaacatgaa aaaatatact ttaatggtgc tattagtttt aggaatttct
     8581 ggatgttttg taaatgaaag agggatttca aatcgttttt atgatgattg taaagagtat
     8641 tatgatggaa gcggaactta tcataaggat tgcccaaaaa attgggtaga tattaaaatg
     8701 actccttgat tattttccac ccacagaggc cattaatgca gctgctacgg cttctggatt
     8761 gttgattttg gcaccttgtt cttgattttc tgtaggttta acagtgttaa gtggcggacg
     8821 cttgagttta aatatatgct catcggtgct aacaacttgt atcgttcctt caaacatttt
     8881 aacttcttta acatgtccaa ccacttttac atctcttttt ttggaggttt cgtcaaaaag
     8941 tgcatgagct tcaagttcta aaacatcgcc taatttaagc ggagcataaa aaaaacattt
     9001 tgatccaata atcactgaaa attctttatt gatagaggct tgtgctacat agtttgctgc
     9061 agcgaaaata aaggcatcaa aaatcaatcc ttgatcatct gctaccattt cgcttgtggt
     9121 tattaaaatt gatttggcat agtttttatc aatttcgata atggttccag caagtgaggt
     9181 gtttaattca ggacaagtga gtaattctgc tctaacgcga gatatatctt ctgcagatgc
     9241 gtattcttca agttgtgcat attcttcaaa attatctttt tttgccatat ctaaccttta
     9301 aattctactt atctacttca aaatatctaa aattcaatat cggcaaaaaa taaaaagaat
     9361 ttatatttta atgcgtatat aaactctttt gggtgcttca tagccttcaa tggtaagatt
     9421 tttatccttt ggatctaaga aattttccag cgaaaaagag tctatccatt ctgtttttct
     9481 ttgttcgttt tcatcggttt tttttgtagc caaaacttca aattctttaa atcctgctct
     9541 ttcacaccag ttttttaatg cactaatgct tggtacaaaa taaatatttg gaattttaga
     9601 ataagtttta ttaggcacaa gagcgatttc tctctcatct tctatataca tggtatctaa
     9661 aaaaacaact ccatttttat taagtcctgc ttttaaatct tttagcattt ttataggatc
     9721 acttctatga taaatcaccc caagacagaa aatcacatca aatttcaagc tatagcttgg
     9781 aagatcttct acgcctaaaa gttcgtattt tataggagtt ttagctaaag cgttaatgag
     9841 ttcaaattgc aaacggtatt tgatagaagg atcaaaacct atgagttttg caggattaaa
     9901 ttcaagcatt ttaaacatat aataaccatt attacagcct atatcagcaa cgcatttttg
     9961 agaaatttcg ttcatgaaag gctttagaat gttgaattta ataaaacttt gccattctgt
    10021 atcgatgaaa agatcgtcta ttttaaaagg accttttctc catggtttaa gttcttttgc
    10081 tatagctaag atttcatctt tggcttgaga atttgtagat aaattcacgc tatcgcctaa
    10141 agaaaaatta caagcaagat tgagagcttt aagttcttga attttagcgt ataaagggtg
    10201 atttagaaat tgtttttcaa gtaaattttc ttgcattttt atccttgaca tttgctttta
    10261 atgctaaatt ataacattaa aagcttttat ggcaatataa atctcatatg cattaagtat
    10321 ttgatcaaaa ataaattttt aaaaactcaa aaatacttcc caaagcttac ataagcttta
    10381 gaactataat catcatctag tttatatttc tttaaagctc tagctaaatc aagcttgaca
    10441 taaaaattcc ctgttttatt ataaagcagt tgtaaaccat aagcatccat atagtttgtt
    10501 tcacttgctc tatatagttt agaatcattc tcataccaag aataacctat attataaaaa
    10561 ggagtgatat aaaaatcttt taaaggagta gccattctaa gtccaaagct agccactaca
    10621 gcattatctc cttctccatc tccattatta taagccctta ctccataagg atctcctaaa
    10681 gatatagttt cactactatc taatgtagct ccattgacaa cttgttgata atttaaacta
    10741 aaaagatgag taaaagtatc attaaagaaa taagcattgt taagattgac attgagttta
    10801 gcaaattttc caaagccatc tccatctgtt ttagaactca ttcctaatat agtagttccc
    10861 ccatctttaa cattaccata gcttacatta gcactataag aaaaactatc attactaatg
    10921 ccattataaa ctccttctat actaaagctt atcgtatcag agcttttatc tatagtcatg
    10981 atatttaatc ttgaattact aagcttttta tgataataac ttgaagttaa ataaaaagaa
    11041 ttataagtcg taatccacaa aggatatttt aaatctatac ctagattttc agaagttcct
    11101 ataaagtttg catttttata agctcctcct aaagcatagt ttcttttaga ataacttgga
    11161 gtgattttta aattccctaa gaaagtagta tagcttatac tatagttagt ttgtgcttca
    11221 tcgcttcttt gcaaataagc attaagacta tctccttgat gagctatgtt attaaaactc
    11281 atactggcac catccctata tctgcctgat tcttttatac cgtaattatc cccataaaac
    11341 aatacagaaa caaagctatc actaggggta gtttctatca ctacatctgt ttcacctgga
    11401 ttatctcctg cttttaaaga agcaagggtt tgtatgccat acatttcatt gactttataa
    11461 actgcatctt ctactaattt agtagtgatg atttcacctt tgtgattagg taatttactt
    11521 tctatagcat aatctcttac actagaattg ttttgaacca catatttacc taaaacacct
    11581 aaggtgatat tgatttgaat ttgatctttt agttcttgtt gtgggatata agctgtagca
    11641 gcaggataac cactaacttg aacataataa gaaatgatat tggctatatc ttgtaagtct
    11701 tgaactgaaa tactttcttt tttgtaatcg tttaaggctt cttgtaaaac ttgctcatct
    11761 aaacctagat ctttaaagtt tatgttttta ttggtaatat gaaagctaaa gctaacttta
    11821 tgaattgatt cttctttaga agtatttttt aaagaaggag tgtttgaatt tggggtttta
    11881 gtttttaaag tattatcatt agacaagtta ggttgatttt tttgagtgtt tttctttgtg
    11941 ttgatggttt ttgaattatt atcatcacta gtattagaat gatctatgat aatcactcca
    12001 tcttttactt ttaaagtgtt gttgtagttt tttgagttag catcttcttt ataaggagat
    12061 tgttctaaca tttgtatggt tttttattat ctttagtatc actagcataa aggcttaaga
    12121 tagctaaact agatagtaag ataatgcgtt ttatttaaat tttccttagt gtttgtttga
    12181 tttttaatct ttaaactttg tttgtttttt aattttttaa caagatccaa aaggctttta
    12241 accttttgga ttttaatcat cttgagcaag gatttcctgc tttaaaatta tccgatacta
    12301 tacaacatta ccactttctt gagtactggc ttcatctata cttgcttgtt tatcatcttc
    12361 attgatattt ggatcttcat ctgtagtttg tataaaaagc tgtagcaatg ccaggttctt
    12421 gttgtcctat ggtatcattt gggttattat tagaaccgtt gttgttgcta ttgttaatat
    12481 cacctgaatc ggtttcatcg tttctgttgt tggagttgtt agatcctaaa tttataatgg
    12541 atactggctt atagtttgca ctatattttc attgactgta agatgactag ttccatttat
    12601 gctcgcactt gctaaggttt tattagaatt ttctaaacta gaattagtac tcgctgtagc
    12661 gatttgaaga gctattgtag cttgttgtaa atcactagaa actttatcta cagcttgttt
    12721 taaacctgca ataactttat cgccattatt acctgttata ccacttagag ctgtattgta
    12781 agctttaact gcttcattat aagcatttgc agcagtatca taagtttttt gagcgttttc
    12841 ttgcccttcg gtcattttag gaattttgag aaagaatttc ctttgtttta ataatggctt
    12901 gtttagcttt tcctagatca ccataagaat ttcccaatac ttcctttaaa gcgtttgcaa
    12961 atgttgcatt attgctatct tgagtttgtc catataaagc agtaataaaa tccatacttt
    13021 gattaatgct tgttagttca tcagctgtta atatttttcc atctttataa aatttactta
    13081 agtcgctaat atcaacacta gaattaaatt tcaagtcatt aaatatagaa tttaaaactt
    13141 catttgagat gttatcttta gcaataagat cgctagtttc tttatagcct attgtgtctg
    13201 ttggatctcc tcctggtcca gttaagcctt tattagatct tatactcaat attacagagt
    13261 cttctttttt attgtatttg atgcaggacc acgaatgaca aatgtatcat tactatagac
    13321 attaagatag acggtattgg attgttcttt tttatttgta aaaatgaatt taccataatc
    13381 agtgccacca tatttcatat ttgaaacttg attgcctgcc atagcaactc tttctcctac
    13441 cgttatagtt tctaaattta taacatttcc tgcattggat ttaattacag gtgatattgt
    13501 tttaggattt cctttaaatg ctgaaagttt tccatctttt gtaaactcct tcatctcctt
    13561 atcacctatt gatgaagcag acagaacaat ttttttccac ctttacccac tactatgcca
    13621 ttaggattga ttaaaaagat attattgctt ccactattga gtgttccatc tataatgaga
    13681 gcttttagaa ccatagacaa tatttaaata attttggtta gtttttcctt gtccaaaatt
    13741 tacagtttca ttacttgcta tattaaaacc accactaaca cttatacttc cacttgttcc
    13801 atgagtgaac ttacccccac ttggtaaagc atagctttgt gtaaaaagta aagaacctac
    13861 aactaaagac aaagaaagtt tatttaactt tttcatgact tgctcctttt tgtaagatta
    13921 agatttaaga atcttttgtt tatatttata aaaatacaaa taaatcattc ctatcttaaa
    13981 aataggaatg atttatttta tccttgcata aatgtttttg tcatcttgag atattcttgc
    14041 ttcataagaa agcttttgta ggttcatatt ttctaatcta tctatagaac ttagtttaaa
    14101 atcttctttg ttttttgcat tttttcaata aagctttgaa gttcttcttg atttaaaata
    14161 ttagagtttt catctataaa accttgctca ctttataaga ttaagatttc tttattttta
    14221 atataggggt attactcttt gagggtgtaa agagctaata ctccctagct agaaatatta
    14281 ataggagcat cgtatgactt caaaagggga gttgtgttga ttttattgga tacaataaga
    14341 taataatgct caaagttatt aataattcta gcttcaactt tagtatttaa aatcagtcta
    14401 ttgtttttac ttaaactgat atctgaagga gctgcagcat tagaagcact ataattatct
    14461 tcataatgca ccaacgctcc tgctaatata tctatgaaag tgtttttaaa tatatttaaa
    14521 ttcccaccta tatataaggt attattataa gatttagctt cacttaaacc tgtaatggct
    14581 gaaggagcta taaaaataga attgttattt ttgtactcat caagattaag attgtttatg
    14641 attaaggtat tatcatgggc attgtttgaa agtccagcta taatacttaa aattccttct
    14701 cttttatctg aagctacacc aaataaagta tcattgataa tgattttatt ataagcagct
    14761 tcattataag ccataatcaa ataagcatta tcagctgcat tagaagaata gttttttata
    14821 tctatagtat tatgattggc tttatctaaa gctcttatga tgattttaga acctttatct
    14881 atattactta catcggtaat gctttgaaca ttgttataat ttatagtatt ataagaggct
    14941 tctttagctt ctgttaatac agttaaattt ctaaaagaag caaagtcttt aatcactact
    15001 tcattgttat tagcactact aggataaaag tcttggttat taagaatgtt tttcttagct
    15061 gtataaatgt atacaggtaa ggttgacata gaattattaa tataaacttt attataatcc
    15121 gcactgcctt ctaaggttct agcagctaca atatttaaag catctttata gctttgagaa
    15181 agatcggttg tggtaagatc gtttttaatg ttaatggtat tatgattagc tcctttagtt
    15241 gcaaagccac cataaaaaga atgttggtta taacctaaga agttattagc gatttctaaa
    15301 ggatgtttta attctatgtt taaggtatta taatttgctt ctccattatt agaagctcct
    15361 gcatagaagt taaacaaagc ttgagcaaaa atgttctcat tgtttttatc tttttttagg
    15421 tttttaatat cttttaaatt gatagtatta tctaaggctt gtccttgttc ggtttttcca
    15481 ccccaaaaat cagcaaataa aacagaatta taagctaagg gttgtttatc atggttcgta
    15541 tacatatcaa gattaaaacc atctatgtct aaaaggtttt tactggcttg aaagttttta
    15601 tctgttccac tatctatata acctgcgcta atatgagcag cagctaaact agcataagct
    15661 ttgcttggac catggataat catattagca tctttgataa agattttatt gttttttaca
    15721 ttaccttgat aagctaaacc acctacaagg tgagtgattc tttcatcaaa ggtattatta
    15781 ccatttttat cttttttagg taaggaagta aaaaactcta cactgctacc tgcttctata
    15841 tttaaactat tatttgtaga atctccataa gtggctatag ctccgattaa ataaggagca
    15901 ccatttaagg ctaaatcata agtgttctca actcccatac taatatgggc atctttttga
    15961 agtatggttt ggttatagct tgcattacca taatgagtaa aggtagaact cattaagaaa
    16021 ttcatgcgtt gattgctttt agaattacta gggtttttta tatgagtatc tttaggttta
    16081 agataaaaaa ctgaactaag ttctccttgt tctaatataa gtttattata acttgcatca
    16141 gcatgatcgg tttttgctgt gattaaaaaa ggaagcactc taactgtttt tatactatga
    16201 ccggctgtat taacaccatg ccttgcttta aaagaaagaa cttcatcttc tctcatatca
    16261 ggagtaagta aataatgttt aaaatttaaa tcgtttatat ttgtaatatt tggtttagga
    16321 ttgttatata ttaaagtaat attgttaata tattgtttag aactcttagc ataataattt
    16381 ataccttgga gttttttata agtagaattg gttttatcat aaagttcgtt atcattaaaa
    16441 taatgctctg gaatattgaa atttcgattg tctgtagtat ttgcttgagt ggctgcaaaa
    16501 gcgttgatgc ttaagaaggt aacaatagaa agtttaaaac aaaatttctc tataccccct
    16561 ccccgtgaag ttaaaaagct ttattaaatt aagattgggc ggaatttttt aatataaact
    16621 aaaaagcgat atcaaagaat ttccgttgta taatctaatg ttttttaaat gtaaaatatt
    16681 ttttaaggta aagcgatgaa aatgcgtgtg tattatgaag atactgatgc gggtggagtg
    16741 gtgtatcata gtaattattt aaaattttgc gagagagcaa gaagtgaaat ttttttcaat
    16801 aaaaaagtag atatttttga tgcgtctaag ggacattttt tgcttgcaaa agcaaattgc
    16861 aatttcttaa aacctgcaaa acttggagat atgatagaga ttaaaacaaa aattttagaa
    16921 gtcaaaaatg cttctgtgga aattttacaa gaaatttata aagatgaaat tttgcttttt
    16981 aaaatggaat taactttagc ttttattaaa aacgaaaaac cagctagaat ggatatgcag
    17041 ttaaaaaagc tctttgaaga attattttaa ttcttcaaag cttgcttgtt tgccttgcat
    17101 aagacgcact ttgtaatcaa cttgagaatt tttgattttc tcatcaaata aactttcgct
    17161 ttttttattt aagaattcgg tataaaagta atcaactcct atactagtag cataagcaat
    17221 ccagttataa tctatacttt gattaaaaat ttcattaaga tagactaggt tatcatcgtg
    17281 gttattgata gaattagcaa tgataaaatt ttctctatct ccttgttgtg ttaaacttaa
    17341 aaatgttgga ttatagttga tttgagtgga taaaagcaca taaggatgaa tgttataaat
    17401 tcttagctga gaacttgcta gagctgtttt gatcaatgga gtgttaaaaa atattgaggc
    17461 attattaact ccaccttgtg atcttaaaag cctgctaaaa tcaagcttct cgccttctat
    17521 ggtatatatt ctagcattat tattttgagc aagaattctt gaatttagat tgcttgataa
    17581 ggcagagcca tcgctaaata ttgcgatatt agcatttgat ttgcttaaaa gtgtggcaat
    17641 ttgagcatca tagtcaatac ttccaaaaat aatattttga tttgaaattt gtatgttgtt
    17701 tttatggata gtcggtatga aaattttcat atttcctgag taatttttca actcattagc
    17761 accttttaag gtaaatccag ctatggcata ctgatatcct tgagcttgtg ctgcatcaag
    17821 cgcggctcga attttatcat tatcttctgt gccggttaaa aaaactttta ctttgatttc
    17881 agctctttgt cttaaaagat aggctatgct tgaatttatt atagtatttg agtagctttt
    17941 tatggttttt tctgggataa ttattgcaag tttaacagaa gtaatttttt gaacattttt
    18001 ttcaaaatca gtaatggaat ttaataattt tgcataaaca ttagataaaa attgatcgtt
    18061 ttgatctgca aattcactta aaaaactaag atacaatctt gattctaaaa gatcaaaaag
    18121 acaatttgtg ttgcattctt gaacgcttaa tttaggataa aaattttcaa ctggttttac
    18181 atcgactaat ttttgctctt ttgcattaag caaaaagcaa gataag
//
LOCUS       DAPIYB010000029        18130 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.029, whole genome shotgun sequence.
ACCESSION   DAPIYB010000029 DAPIYB010000000
VERSION     DAPIYB010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18130
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.029"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..538)
                     /locus_tag="RJ318_000776"
     CDS             complement(<1..538)
                     /locus_tag="RJ318_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HDV7430663.1"
                     /translation="MIRSLYYLKAMGFNFVDTHTNHFEQVQNFQELKQLVSSCTLCQF
                     SKTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSKKGEKLKHYIYQILGLCDED
                     FYFSYLFKCFCNGKFDDFSLQSCLPFFWNELKLIQPAFLLCLGEYTFKSLGFKDYHIL
                     KGEVFAYKNFFIMPSYDLD"
     gene            complement(535..1014)
                     /locus_tag="RJ318_000777"
     CDS             complement(535..1014)
                     /locus_tag="RJ318_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7430664.1"
                     /translation="MSEFKIIDLRQEDLDILQEMIIEFAKYEDMLDFLQCTKEKLEHS
                     LLKNKFARAFLLKENEKTIGYMIYFYTFSSFWGSGGIYLEDIYIREDFRKKGYGKAVF
                     KFLGEICKKENLKRLDWVCLNDNILGINFYESLNAKHLKQWRNYRLSGENLEKLCDL"
     gene            1145..1279
                     /gene="rpmH"
                     /locus_tag="RJ318_000778"
     CDS             1145..1279
                     /gene="rpmH"
                     /locus_tag="RJ318_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDV7430665.1"
                     /translation="MKRTYQPHGTPRKRTHGFRVRMKTKNGRKVINARRAKGRKRLAV
                     "
     gene            1276..1602
                     /gene="rnpA"
                     /locus_tag="RJ318_000779"
     CDS             1276..1602
                     /gene="rnpA"
                     /locus_tag="RJ318_000779"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDV7430666.1"
                     /translation="MKNFDKFSTNEEFSSVYKVGKKWHCEGVIIFYLNSYEKKIAVVA
                     SKKVGKAVVRNRSKRILRALFAKFERYLQDGKYIFVAKNEITELSFSRLEKNLKWGLK
                     KLECFK"
     gene            1599..1940
                     /gene="yidD"
                     /locus_tag="RJ318_000780"
     CDS             1599..1940
                     /gene="yidD"
                     /locus_tag="RJ318_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDV7430667.1"
                     /translation="MICLKILRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLA
                     FFSTFFRILRCNPFFKGGFDYPRVSKNFYPINLCFKPIFLAEKQLCFLYIPYKNKSFY
                     LIKIIFKRTNQ"
     gene            1937..3523
                     /gene="yidC"
                     /locus_tag="RJ318_000781"
     CDS             1937..3523
                     /gene="yidC"
                     /locus_tag="RJ318_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDV7430668.1"
                     /translation="MNNSNNIFQQKRILLAVVISFLFFVIYDYFFIPKQPLKIEQNIT
                     QKNQQNTSINNTPNIQNATTNTPSAALVSQDSVISKVQSKHFEAQIDSFGRISAFYLK
                     DRKYQNEKGEFINLVSKENSPYPLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQV
                     LKLTQNLSGLKIEKDITFYPKGNYEIEVKLSKNANYFISPGYRPNIAVDSYTVHGALV
                     MDNKETIETYKDGDVEKDESANNVVMTSAFDRYYATFFYNFDKPLNVAISKDANQNPI
                     VFAYSDNEFKAGGYIGSKEHVILRSIDPRLEAVVEYGWFTFIAKPMFEFLNFLHQYIG
                     NWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDPQKMNMHMME
                     LYKKHGANPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFILP
                     ILMGATMFLQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFVNNLCSLV
                     QQWVINKIFAKEHHKKTSGA"
     gene            3527..4345
                     /locus_tag="RJ318_000782"
     CDS             3527..4345
                     /locus_tag="RJ318_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Jag N-terminal domain-containing protein"
                     /protein_id="HDV7430669.1"
                     /translation="MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRK
                     KAIIEAKAKKRILKKNPKKEFTSSKNHKPETHEPKQENKIEIKNEKNKSQKEKYTVKS
                     DEIFDSFHRESKGVRNTQDILDEIRIQLVKLLESSQFKIELSELRMYDEDCVLIRLDG
                     EDAALMIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQSVIEK
                     IKIHGRGQTKPLDGVLIKIALEQLRAEFPDKYVGIKQNNDQRFVVINDFFKKDE"
     gene            4338..5666
                     /gene="mnmE"
                     /locus_tag="RJ318_000783"
     CDS             4338..5666
                     /gene="mnmE"
                     /locus_tag="RJ318_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDV7430670.1"
                     /translation="MSDTIAAIATAHGVGSISIVRLSGERALEFALKLSHKTKLTPRH
                     ATFTKLFNQNNEIIDEAIMIYFKAPYSFTGEDIVEFQTHGGFSVSEVLLEELVSLGAR
                     LALAGEFSKRACLNGKMTPLKALNIQDLILSKSALAAKIIARNMQGNLGELLEKIRTD
                     LVKTLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIA
                     IVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEENFKLGTHLLRIIDTAGIRESK
                     DVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDL
                     ENVFKNTQNKNFIKLSAQKDITLLKEELQNYLNSFDSEGIMVSSLDLINACKISSEAI
                     FRAKGLLEESSLEFFAFELNLAINELARFTKDFQRDEILDEMFGNFCLGK"
     gene            5677..7863
                     /gene="purL"
                     /locus_tag="RJ318_000784"
     CDS             5677..7863
                     /gene="purL"
                     /locus_tag="RJ318_000784"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HDV7430671.1"
                     /translation="MDKETIKAHKISDEEYAQILEILGREPNLLELGVISAMWSEHCS
                     YKSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMAAVFKVESHNHPSFIEPFAGAAT
                     GVGGILRDVFTMGARVVAGLNSLKFGDIHDEKCGKHQKYLVKGVVNGISHYGNCMGVP
                     TIGGECAFDECFNGNILVNAFALGVCKSEDIFYAKAEGVGNPVIYVGSKTGRDGLGGA
                     VMASDSFNEESKSLRPTVQIGDPFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSF
                     EMAGRSGSGMKLYLDKTPMRESGMTPYELMLSESQERMLICAKKGYEDKVIEIFKKWD
                     LDAVVMGEVTNTGKMELFWHDELVGLIPIEPLSEKAPILSRPTSEPKYLSEIKNYKFE
                     LKSSVQELFIQMLQNENINNKAFIYDQFDSSVQTNTIKADGRLGASVIRIKENGASVA
                     MAIECNSRLNYVNPKIGAALAVASAGRKVACTGAKPLAISDCLNYGNPQNPEVMWQFA
                     QGCEGIKEACKELNTPVVSGNVSLYNETEGVSIYPSPTIVSVGVLEDANKTLKASFEK
                     ENLSVYLLGESLGEFSGSMVMKIQDKKVSGSLKELDYKAELALWDLLYKANQNSLLEC
                     ANSVGIGGIAMTLAKMFAISSVGANLTSDFDDEKMIFDESASRAIIGLSKENEEAFLN
                     LAKEFGVKAYKLGVSTSQKHFKLDSIELSKAELDKLYFESFKEQIQ"
     gene            7860..8630
                     /locus_tag="RJ318_000785"
     CDS             7860..8630
                     /locus_tag="RJ318_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family molecular chaperone"
                     /protein_id="HDV7430672.1"
                     /translation="MTLVLIILVVLVFYWYYKTWGKQDFLNSATRGAKGFAKGFARGV
                     MEERMDEFKRRMNYYVIALLAKIAKSDGRVSENEAEMIKDLLDANAKDEKERAFLKAS
                     FNEHKENLSDAFYVAKDFLKEVPLPKNERFNVLRVLVFMALIDADFNAKKREILEQIA
                     KAFDIAKSELDAFIASLSNLKSTKKELSLDEAFAILELPNNADLNAVKKQYRNLAKKY
                     HPDILNANNVSEKELKIGVEKFQKINEAYEKVKKHLER"
     gene            8633..10165
                     /gene="purH"
                     /locus_tag="RJ318_000786"
     CDS             8633..10165
                     /gene="purH"
                     /locus_tag="RJ318_000786"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDV7430673.1"
                     /translation="MRALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGIKV
                     IEVSDFTKSPELFEGRVKTLHPKIHGGILHKRSDENHIKQAKENEILGIDLVCVNLYP
                     FKKTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDPLDYEKVIETLKKGQND
                     ENFRLNLMIKAYEHTANYDAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKG
                     ALYEFDAFFSANFKALKGEASFNNLTDINAALNLASSFDKAPAIAIVKHGNPCGFAIK
                     ENLVQSYIHALKCDSVSAYGGVVAINGTLDEALANKINEIYVEVIIAANVDEKALAVF
                     EGKKRIKIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEVGEDELKNAKLMSQREASK
                     EELKDLEIAMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAAIAKAKEMGLDLQ
                     GCVLASEAFFPFRDSIDEASKVGVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRHF
                     LH"
     gene            10264..10992
                     /locus_tag="RJ318_000787"
     CDS             10264..10992
                     /locus_tag="RJ318_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430674.1"
                     /translation="MFKTIGFKVSAAIFVVLLISFIVMQVILNLDFKNTANKMSRANL
                     DTVSTSVFQTMRMAMNLGDPEKIKEAIEDAKSIEGISDIKIYPSKDTIDLFEMKAPQI
                     SNDKRIIEQFSNPKIQALEENVNGVVHLRLIRPLIADESCVACHANANVGSVIGVMDI
                     SHSLEGVQKDISKTSQSYIVIFTIALIFTLCVVFLMLKVVVGKPVLELLNHAKELAQG
                     SGNLKARISVKGQDEIALACGYIN"
     gene            11182..11850
                     /locus_tag="RJ318_000788"
     CDS             11182..11850
                     /locus_tag="RJ318_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002930723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDV7430675.1"
                     /translation="MSNKANSANEKSFLLLEQMLKSLFNVANKVSTVSQNENELAKKV
                     ENMVNQAGNIQKATQMMDEIADKTNLLSLNAGIEAARAGAFGRGFSVIAEDVRQLAQN
                     SEEFLGNVAQITKELLQSINEVSAELKKNAQSVQALNDDTALLVDDANEVKLCNEDAR
                     ALVTQCTEKIKISQENIQNLLSRMQENVEVSEKNEEISKILLQVADELKIVCHNLESE
                     LNQF"
     gene            11866..12300
                     /locus_tag="RJ318_000789"
     CDS             11866..12300
                     /locus_tag="RJ318_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HDV7430676.1"
                     /translation="MKKMLQIALAATFFAGCASTSLTSSTSKGNNELVQNQLFKIEKI
                     IVNGKTFDPKNAEESPNISFENNKFYGYSGCNRFFGSYQTKADTLQIEGDRVASTQML
                     CHPMDVMDFENSFLSNFKGTFKISNENGKLVLSNDEMKIFFK"
     gene            12399..13376
                     /locus_tag="RJ318_000790"
     CDS             12399..13376
                     /locus_tag="RJ318_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agamatine deiminase"
                     /protein_id="HDV7430677.1"
                     /translation="MIKSIPEWSEQEYLMLSLPHEKSDWNPYLEEILQSYKEFVKVVS
                     EFQKVLLIAPKQSDFENFKDIKNVEFFKCDTNDTWIRDFGAIDIVENGRLKALDFTFN
                     AWGNKFQSELDNAVNSKLFKEKFKEELKKVDFILEGGSIDFNGEGVMLTSSHCLLNEN
                     RNSHLNKTQIDTKLKEIFGLKQIIWLENGFIKGDDTDHHIDTLARFIDKNTIAHCICE
                     DEEDEHYLPLQKMKEELKKTGFDLLELPIPKPLYYEERRLGATYANFVFINNALIVPF
                     YKDKNDEIIAKRLSKALPNHKIIGVDARVFLRQNGSLHCSCQNRFKGLR"
     gene            13373..14260
                     /locus_tag="RJ318_000791"
     CDS             13373..14260
                     /locus_tag="RJ318_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDV7430678.1"
                     /translation="MSLQKKATLVASLCAIVLALVKFIVGLTSGSVAVLSSAIDSLMD
                     FAISAFNFLALKKSSQKANENYNFGFSKIEALMGLLEGVFIVGVGIFIFYESILKIYY
                     KEEIKDLNSSIYVMIFALIMTFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTL
                     GALVLIYFTNLHIIDAIFGIVISLYTAFSAFKIIKKALAFLMDEALPKEQVDKICTLI
                     SNNPEIISYHELKTRKTPSCNYLSVHLVFCPIISLLNAHKISDEIEEGVRKMFENEKW
                     DIQIHLDPYDDAEQERQRQ"
     gene            14257..15129
                     /locus_tag="RJ318_000792"
     CDS             14257..15129
                     /locus_tag="RJ318_000792"
                     /EC_number="3.5.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoylputrescine amidohydrolase"
                     /protein_id="HDV7430679.1"
                     /translation="MKIALIQQKFHLNKEQTIKKTCEFIEEASKQGAELVCLGELHQS
                     EYFCQSENVDFFDYANDYEKDVKFWANIARKNQIVLIASLFEKRSAGLYHNTAVVFEK
                     DGSIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARI
                     MALKGAEILIYPTAIGWFDKDKDEEKQRQLNAWLGVQKGHAIANGLYVVAINRVGFEK
                     DVSGVEEGIRFWGNSFVFGPQGEELCLLDSQNECVKIIEIDKKRSENVRRWWPFLRDR
                     RIEYFTDLTKRFID"
     gene            complement(15141..16487)
                     /locus_tag="RJ318_000793"
     CDS             complement(15141..16487)
                     /locus_tag="RJ318_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7430680.1"
                     /translation="MKSCLYFTFIVLFLTACSTKNLTSLHRENLEQKNENQHYVKLEY
                     EQNVNILPQFAYDINFDAKRYKKYFFNPWHDSFKNYKGQNIFWSFPLYLNSKNTYYFF
                     NKQIIPLSWFKNAINNANIQEFGKLNQKALIIQNTIIKNLPTQRAILKNPFFENEGIP
                     FDYASDGILNTGAPVLISHFSKDKRYAFVLGEAGFGFVESKNLEFFSNDRAKIYENLN
                     FITPLKEKFAIYSEDGKFLFESRIGAIYPYYKEDKNYFYGKIGSKKYKISKKDVSKFP
                     LQFNDKNLKNQLSQVLNLPYGWGGYNFERDCSLLTRDIFSAFGLYLPRNSAAQKNSFN
                     HFDISTLSNSQKKDFLNRFGKAYLSLLYLPGHIMLYAGQITDNNIAIHNIWGLRKDAT
                     QRLLISSSVITSLEIGKNEILEDNLLLSRLKEISFINLNEQEKEQIKSYLENIQNK"
     gene            16536..17879
                     /gene="pif1"
                     /locus_tag="RJ318_000794"
     CDS             16536..17879
                     /gene="pif1"
                     /locus_tag="RJ318_000794"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase Pif1"
                     /protein_id="HDV7430681.1"
                     /translation="MFDKLEKILAYDNVFLSGGAGVGKSFLTNELIKSYRKQKKLAIA
                     LGSSALSAFNIGGVTLHSFFCLGYCDDMMKLSVLDRNQKQKEKLTKLKELLKTIELII
                     IDEISMVSANVFEMIGFRLKNSQFNGKILVVGDFFQLPPVIKEKKETLFNHSYYAFSS
                     FFWQDLNFKNIKLSQPKRTQNMEFYNHLSLIRQGFLDEKILSFFESLRIDYKELENLE
                     DDYTLLCGINKKVNNINQEKLSKLETPLVCFKAQVKKEDKRIKDEELDSWIRSLNILE
                     ELNIKIGARIIFCVNNWDKNYYNGEQGIIEDILYEEEKIYISIIKNNGMKILLEPYTF
                     FMEELEQSGKDFVVNILASVTQFPIKLAYAITIHKSQGMSIEKLVCDIDHIFENGQLY
                     VALSRATNPNTLKIYSTKKINFGFYFANILKIDSNVIEFYKKHNFLDLEIQEQII"
     gene            17889..>18130
                     /locus_tag="RJ318_000795"
     CDS             17889..>18130
                     /locus_tag="RJ318_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430682.1"
                     /translation="MKKIFLSVFLVLSLNAQNLEIDKIRTDLYSKSGANVLKKVEISL
                     EFDGNNLKENENKLIDAVNTVISGFFYEDIFTEIGK"
BASE COUNT         6552 a         2226 c         3272 g         6080 t
ORIGIN      
        1 aatctaaatc ataacttggc attatgaaaa aatttttata agcaaaaact tcacctttta
       61 aaatgtgata atctttaaat cccaagcttt taaatgtata ttctcctaga caaagtaaaa
      121 aagcaggttg aatcagtttt agttcgttcc agaaaaatgg taagcaagat tgtagcgaaa
      181 aatcatcaaa ttttccatta caaaaacatt taaataaata agaaaaataa aaatcttcat
      241 cgcaaagccc taaaatttga taaatatagt gttttaattt ttcacctttt tttgaattaa
      301 gtaaaattcc gctttcattt tcactctttt gcccaaaaac atcaagaatt agcaatttgg
      361 cattttttat cttaggctcc ataagactaa attttcttgt tttggaaaat tggcataagg
      421 tgcaagatga aacaagttgt tttaattctt gaaaattttg tacttgttca aagtggtttg
      481 tatgtgtatc aacaaagtta aatcccatag cttttaaata ataaagactt cttatcataa
      541 atcacataat ttttctaaat tttctccact tagacgataa tttctccatt gtttaagatg
      601 tttagcgttt aaactttcat aaaaattaat acctaaaata ttatcattta agcaaaccca
      661 gtcgagtctt tttaaatttt cttttttgca aatttctcct aaaaatttaa aaacagcttt
      721 tccataacct tttttacgaa aatcttctcg tatataaata tcttcaagat aaattccacc
      781 gctgccccaa aaagacgaaa aagtataaaa ataaatcata tagcctatag ttttttcatt
      841 ttcttttaac aaaaaagcac gagcaaattt attttttagt aaagaatgtt ccagtttttc
      901 tttcgtgcat tgaagaaaat ctaacatatc ttcgtatttt gcaaattcta tgatcatttc
      961 ttgtaaaata tctaaatctt cttgtcttaa atcaataatt ttaaattctg acatttttaa
     1021 ccttttaaaa ataatttcaa aatttatcaa aagaatttaa aaattactct taatcaaaag
     1081 caatttataa gtaagattaa gataaaatac aagtttattt tataattttt taaggaaaaa
     1141 tcaaatgaaa agaacttatc agccgcatgg tactccaaga aaacgcactc atggtttccg
     1201 tgttcgtatg aaaactaaaa atggtcgcaa agtgatcaat gcaagacgcg ctaaaggtag
     1261 aaaaagactt gctgtgtgaa aaattttgat aaatttagca caaacgagga attttcatct
     1321 gtatataaag taggcaaaaa atggcattgc gaaggtgtga tcatttttta tctgaatagt
     1381 tatgaaaaaa aaatagcagt tgttgctagt aaaaaagttg gaaaagcagt ggttagaaat
     1441 cgttcaaaac gaattttaag agctttgttt gctaagtttg aaagatatct tcaagatggc
     1501 aaatatattt ttgtagctaa aaatgaaatc actgaacttt ctttttctag gttagaaaaa
     1561 aatctaaaat ggggattgaa aaaactagaa tgtttcaaat gatatgccta aaaatactcc
     1621 gtttttatca gaaattctta agccctttaa aacccgctgc ttgtaggtat tatcctagtt
     1681 gttctgagta tgcgctttgg cagtttcaaa aaaagaattt ttttctagct tttttttcta
     1741 ctttttttag aattttaaga tgcaaccctt tttttaaagg gggttttgat tatcctagag
     1801 tttctaaaaa tttttatcct ataaatttat gttttaagcc tatattttta gcagaaaaac
     1861 aactttgttt tttatatata ccttataaaa ataaaagttt ttatcttata aaaatcatct
     1921 ttaaaaggac aaatcagtga ataattcaaa taatattttt cagcaaaagc gtatactttt
     1981 agctgttgtg atttcttttt tattttttgt tatttatgat tattttttca ttccaaagca
     2041 acctttaaaa atagaacaaa acattacaca aaaaaatcaa caaaacacaa gcataaataa
     2101 cactcctaat atacaaaatg ccaccacaaa tactccaagt gcggctttag tttcgcaaga
     2161 tagtgtgata tctaaggttc aaagcaagca ttttgaagca caaattgact cttttggtag
     2221 aatttctgct ttttatttaa aagatagaaa ataccaaaat gagaaaggag aatttataaa
     2281 tcttgttagc aaggaaaata gtccttatcc tttagaaatg cgttttagtg atccaagtat
     2341 taactcagag gcttttaaaa ttccttatgt tgctaacgct agcaatcttt ttgttgatga
     2401 aaatggaagt caagttttaa aactcactca aaatctttct ggattgaaaa tcgaaaaaga
     2461 tattactttt tatccaaaag gaaattatga gatagaagtt aaactcagca agaatgcaaa
     2521 ttattttata agtccaggat atcgtccaaa tattgccgta gatagttata cagttcatgg
     2581 tgctttggta atggataata aagaaaccat cgaaacttat aaagatggag atgtagaaaa
     2641 ggatgaaagt gctaataatg tcgtaatgac ttcggctttt gatagatact atgcaacttt
     2701 cttttataat tttgataaac ctttaaatgt ggcaatcagc aaggatgcta atcaaaaccc
     2761 tatagttttt gcttatagtg ataatgaatt taaagcaggg ggctatatag gctctaaaga
     2821 acatgtgatt ttaagaagta tagatccacg ccttgaagca gttgttgaat atggttggtt
     2881 tacttttatt gctaagccta tgtttgagtt tttgaatttc ttgcatcagt atataggaaa
     2941 ttggggttgg gctatcgttg tgatgacttt aattgtgcgt attattttat tcccgctaac
     3001 ttataagtct atgatttcta tgaataaact taaagatctt gctcctaaaa tgaaagatat
     3061 tagagagcgt tataaaggcg atccacaaaa aatgaatatg cacatgatgg agctttataa
     3121 aaaacatggt gcaaatccta tgagtggttg tttgcctata cttttacaaa ttcctatttt
     3181 ctttgctatt tatcgcgttt tgcttaatgc tattgagcta aaagcagctc cttgggcgtt
     3241 ttggatacat gatttatcgg taatggatcc ttattttatt ttgcctattt taatgggtgc
     3301 aacgatgttt ttacaacagc ttattacacc tatgactata caagatccta tgcaagctaa
     3361 gattatgaaa tttttaccag tgatttttac ttttttcttt atcactttcc cagcaggact
     3421 tacgctttat tggtttgtaa ataacctttg ttctttggtt caacaatggg ttatcaataa
     3481 aatatttgct aaagaacatc acaaaaaaac aagcggagca tgaaaaatga aaatcgaagc
     3541 cattgatctt caaagtgcct taacagaagc ttcaagaagt ttagaatgtt ctgtgatgga
     3601 cttagaatat gagattattc agcatccaag aaaaggtttt tttggatttg gaagaaaaaa
     3661 ggcaattata gaggctaaag caaaaaaaag gattttgaaa aaaaatccta aaaaagaatt
     3721 tacaagttca aaaaatcaca aaccagaaac acatgagcca aaacaagaaa acaagattga
     3781 aataaaaaat gaaaaaaata aaagtcaaaa agaaaaatac acagtaaaaa gtgatgaaat
     3841 ttttgatagt tttcatcgag aaagcaaagg agtgcgtaat actcaggata ttttagatga
     3901 gattcgtatt cagcttgtaa aacttttaga aagctcccag tttaaaatag agcttagtga
     3961 acttagaatg tatgatgaag attgtgtttt gattcgattg gatggggaag atgctgcttt
     4021 gatgataggc aaagaagcac atcgttacaa ggctatttct tatcttttgc ataattggat
     4081 caatttaaaa tataatcttt tagtgcgcct tgagatcgct caatttttag aaaatcaaat
     4141 tcaaggtatg cagctttatt tacaaagcgt gattgaaaaa attaaaattc atggacgcgg
     4201 acaaaccaaa cctttagatg gggttttgat aaaaatcgct ttagagcagt taagagctga
     4261 atttccagat aagtatgtag gaattaagca aaataatgat caaagatttg ttgtaataaa
     4321 cgactttttc aaaaaagatg agtgatacta tagcggctat tgccacagct catggtgtgg
     4381 gttcgatttc tattgtaaga ttaagcggtg aaagggcttt agaatttgcc ttaaagctta
     4441 gccacaaaac caaacttacc ccgcgccatg ctacttttac aaaacttttt aatcaaaata
     4501 atgaaattat cgatgaagct ataatgatat attttaaagc cccttatagt tttacagggg
     4561 aagatatagt agagtttcaa actcatggag gatttagtgt gagtgaagtt ttactcgaag
     4621 aacttgtgag tttaggagca agacttgctt tagcagggga atttagcaaa agagcgtgtt
     4681 taaatggcaa aatgactcct ttaaaagctt taaatataca agatctcata ctttcaaaat
     4741 ctgcacttgc agctaaaatt atagcacgca acatgcaagg aaacttagga gaacttttag
     4801 aaaaaattcg cacagatttg gttaaaacct tggcttttgt agaaactagc attgattatg
     4861 ctgatgatga tttaccttct gatttattag agcaaatttc tactatgtgt gaagaaaatt
     4921 ctaaaatttt aaaagaaatt tatacgcttt ctcaaagcaa aaaaggactc atagaaggtt
     4981 ttaaaatcgc tattgtaggt aagccaaatg taggcaaatc ttcgctttta aatgccttgc
     5041 tttcttatga aagagctatt gtttcagata tagcaggcac cactcgtgat actatagaag
     5101 agaactttaa attaggaacg catttattac gcattataga tacagcgggt attagggaaa
     5161 gtaaagatgt tatagaacaa atcggcgtag ctttaagtaa aaaaagttta gaagatgcag
     5221 atattatttt ggcagtcttt gatgcttcaa gagtgcaaga taaagaagat gagaaaattt
     5281 ttgacttatt agcaaatact gataaaaaaa tcttttggat tttaaataaa agtgatttag
     5341 aaaatgtttt caaaaatact caaaataaaa attttatcaa gcttagtgct caaaaagaca
     5401 ttactttgtt aaaagaagaa ttgcaaaatt atcttaattc ttttgatagc gaaggtatta
     5461 tggtaagttc tttagatctt attaatgctt gtaaaatttc aagtgaagcg atttttagag
     5521 ctaaggggct tttagaggaa agttctttag agttttttgc ttttgagctt aatttagcta
     5581 ttaatgaact tgcaagattt accaaagatt ttcaaagaga tgaaatttta gacgaaatgt
     5641 ttggtaattt ttgtttagga aaatgaaagg atagaaatgg ataaagaaac cataaaagca
     5701 cataaaatca gcgatgaaga atatgcacaa attttagaaa ttttaggacg tgagccaaat
     5761 ttattagaac ttggggttat ttctgcgatg tggagtgagc attgctctta taaatccagt
     5821 aaaaaatatc ttaatggttt tccaactaaa gcaccttggg tgattcaagg tccaggtgaa
     5881 aacgcagggg ttattgatat cgggcaaggt atggcagcgg tttttaaagt ggaaagtcac
     5941 aatcacccta gttttatcga accttttgca ggtgcggcta caggagtagg gggaattttg
     6001 cgtgatgttt ttactatggg tgcaagagtg gttgcggggc taaattcttt aaaatttggc
     6061 gatattcatg atgaaaaatg cggcaaacat caaaaatacc ttgttaaagg cgtggtaaat
     6121 ggaatttctc attatggaaa ttgcatgggt gtgccaacta taggcggaga atgtgctttt
     6181 gatgagtgtt ttaatggaaa tatcttagtt aatgcctttg ctttaggggt ttgtaaaagt
     6241 gaagatatct tttatgctaa ggctgaaggt gtaggaaatc ctgtgattta tgtgggttca
     6301 aaaacagggc gtgatggact tggtggagcg gttatggcaa gtgatagctt caatgaagaa
     6361 agcaaatctt tgcgtcctac agtgcaaatt ggcgatcctt tcagtgaaaa acttcttatg
     6421 gaggcttgtt tagagctttt taaaaccgat tatattgtgg gtattcaaga tatgggtgct
     6481 gcagggctta cttcaagttc ttttgaaatg gcaggaagaa gtggcagtgg catgaaactt
     6541 tacttagata aaactcctat gcgtgaaagc ggtatgactc cttatgagtt aatgcttagc
     6601 gaatctcaag aaagaatgct tatttgtgcg aaaaaaggct atgaagataa ggttatagag
     6661 attttcaaaa aatgggattt agatgctgtg gttatgggtg aagttaccaa tacaggaaaa
     6721 atggagcttt tttggcatga tgagcttgta ggacttattc ctatcgagcc tttaagtgaa
     6781 aaagcgccga ttttaagtcg ccctacaagt gaaccaaaat atttaagtga aattaaaaat
     6841 tataaatttg agttaaaatc aagcgttcaa gagcttttta tacaaatgct tcaaaatgaa
     6901 aatattaata ataaagcttt tatttatgat caatttgatt caagtgtgca aaccaatacc
     6961 ataaaagctg atggaagatt aggtgctagt gttattcgta tcaaagaaaa tggtgcaagt
     7021 gtggctatgg ctatagaatg taattcacgc ttaaattatg taaatcctaa aataggagca
     7081 gctttagcag tagcttctgc aggaagaaaa gttgcttgta cgggggctaa acctttggca
     7141 ataagcgatt gtttaaatta tggaaatccg caaaatcctg aagtgatgtg gcaattcgca
     7201 caaggttgcg aaggtattaa agaagcttgt aaagagttaa ataccccagt agtaagcggc
     7261 aatgtttcgc tttataatga aactgaaggc gtaagtattt atccaagtcc tactatagta
     7321 agtgtagggg ttttagaaga tgcaaataaa accctaaaag ctagttttga aaaagaaaat
     7381 ttaagcgttt atcttttggg tgaaagttta ggagaattta gtggatctat ggtaatgaaa
     7441 atccaagata aaaaagtatc aggaagtctt aaagagcttg attataaagc tgaacttgca
     7501 ctttgggatt tgctttataa agccaatcaa aattctttac ttgagtgtgc caatagcgta
     7561 ggaatagggg gtattgctat gactttggca aaaatgtttg ctatttctag tgtgggtgca
     7621 aatttaacaa gtgattttga tgatgaaaaa atgatttttg atgagagtgc aagtcgtgct
     7681 ataatagggc ttagtaaaga aaatgaagaa gcttttttaa atttagctaa agaatttgga
     7741 gtaaaagctt ataaattagg tgtgagtaca agccaaaaac attttaaact tgatagcatt
     7801 gagttaagca aggctgaact tgataagctt tattttgaaa gttttaaaga gcaaatccaa
     7861 tgactttagt tttaattata ctcgttgttt tggtgtttta ctggtattat aaaacttggg
     7921 gaaaacagga ttttttaaac tcagctacaa gaggagccaa aggctttgct aagggttttg
     7981 ctcgtggggt tatggaagaa agaatggatg agtttaaaag gcgtatgaat tactatgtta
     8041 tcgcactttt ggcaaaaatt gcaaaaagcg atggcagggt aagtgaaaat gaagctgaaa
     8101 tgatcaaaga tcttttagat gcaaatgcca aagatgaaaa agaaagagct tttttaaaag
     8161 caagttttaa cgaacataaa gaaaatttaa gcgatgcttt ttatgtggca aaagattttt
     8221 taaaagaagt gcctttgcct aaaaatgagc gttttaatgt cttgcgtgtg cttgttttta
     8281 tggctttaat cgatgcagat tttaatgcta aaaagcgtga aattttagag caaatcgcta
     8341 aagcctttga tatagcaaaa agcgaactag acgcttttat agcaagtctt tcaaatttaa
     8401 aaagtactaa aaaagaatta agtcttgatg aagcttttgc tattttagaa cttccaaata
     8461 atgcggattt aaatgcggta aaaaaacaat accgcaattt ggcaaaaaaa taccatcctg
     8521 atattttaaa tgcaaacaat gttagcgaaa aagagcttaa aatcggcgta gagaaatttc
     8581 aaaaaatcaa cgaagcttat gaaaaagtta aaaaacattt agaaaggtaa aaatgagagc
     8641 attacttagt gtgagtgata aagaaggcat agtagaattt ggcaaagagc ttgaaaattt
     8701 aggttttgag attctttcaa ctggggggac ttttaagctt ttaaaagaaa atggaataaa
     8761 agttatagaa gtgagtgatt ttacaaagag tcctgagctt tttgaagggc gtgtgaagac
     8821 tttgcaccct aagattcacg gtgggatttt gcataaaaga agcgatgaaa atcatatcaa
     8881 acaagcaaaa gaaaatgaaa ttttaggcat tgatctagtt tgtgtaaatt tatatccttt
     8941 taaaaaaact accattatga gcgatgattt tgatgaaatt atagaaaata tcgacatagg
     9001 cggacctgcg atgataagaa gtgcagcaaa gaactataaa gatgtgatgg tgctttgcga
     9061 tccacttgat tatgaaaaag tgattgagac tttaaaaaaa ggtcaaaatg atgagaattt
     9121 tcgtttaaat ttgatgataa aagcttatga gcatacagca aattacgatg cttatattgc
     9181 aaattatatg aatgaacgct ttaacggagg ttttggagcg agtaaattta tagtaggaca
     9241 aaaagtattt gatacaaaat atggagaaaa tccacatcaa aaaggggctt tatacgagtt
     9301 tgatgccttt tttagcgcaa atttcaaagc ccttaaaggc gaagcaagtt ttaacaatct
     9361 aaccgatatt aacgcagctt taaatttagc tagtagtttc gataaagctc cagctattgc
     9421 tatagtaaaa catggaaatc cttgcggttt tgctataaaa gaaaatttag tacaaagcta
     9481 tatacatgct ttaaaatgcg atagcgtcag tgcttatgga ggagtggttg caatcaatgg
     9541 aactcttgat gaggctttag caaataaaat caatgaaatt tatgtagaag taatcattgc
     9601 agccaatgta gatgaaaaag ctttagccgt gtttgaaggt aaaaaacgca ttaaaatttt
     9661 cactcaagaa agtccgtttt taatccgcag ttttgataaa tatgatttta aacatattga
     9721 tgggggtttt gtgtatcaaa acagtgatga agtgggcgaa gatgagctta aaaatgcaaa
     9781 gcttatgagt caaagagagg caagtaagga agaattaaaa gatcttgaaa tcgctatgaa
     9841 aatagcagcg tttaccaaat caaacaatgt tgtttatgta aaaaatggcg ctatggtggc
     9901 tataggtatg ggtatgacaa gtagaatcga tgcagcaaag gcagcaatcg ctaaagctaa
     9961 agaaatggga cttgatttgc aaggttgcgt tttagcaagt gaagcctttt ttccttttag
    10021 agatagcata gatgaagcaa gtaaagtagg ggttaaagct atagtagaac caggcggaag
    10081 tataagagat gatgaagtgg taaaggcggc tgatgagtat ggtatggcgc tttattttac
    10141 aggagtaaga catttcttac attaagttta atggaatgtt atgtttttta cacataattc
    10201 aataaaaatt aaataaatta tgtgtaaaat atttccgaaa aattttattt ttaggaaact
    10261 atgatgttta aaactatagg atttaaggtt tctgctgcaa tttttgtggt gttgcttata
    10321 agttttattg taatgcaagt gattttaaat ttggatttta aaaatactgc caataaaatg
    10381 agcagggcaa atttagatac cgtaagtact tctgtttttc aaacaatgag aatggctatg
    10441 aatttaggag atcctgaaaa aattaaagaa gccattgaag atgcaaaaag tatagagggt
    10501 attagtgata ttaaaattta tccttcaaaa gatactatag atctttttga gatgaaagcc
    10561 cctcaaattt caaatgataa gcgtattata gaacaatttt caaatcctaa aattcaagct
    10621 ttagaagaaa atgtaaatgg tgttgtgcat ttaagattga tacgcccttt gattgcagat
    10681 gaaagttgtg ttgcttgtca tgcaaatgct aatgtaggga gtgtgattgg ggttatggat
    10741 atatcacatt ctttagaagg tgttcaaaaa gatataagca aaaccagtca atcttatatt
    10801 gtaatattta ctattgcttt gatttttacc ctttgtgtgg tttttttaat gcttaaagtt
    10861 gttgttggaa agcctgtttt agagctttta aatcatgcta aagaattagc tcaaggaagt
    10921 ggcaatttaa aagctcgtat ttcagttaaa ggtcaagatg aaattgcttt agcttgtgga
    10981 tatatcaatt aatttatcga aaaaactcat aaggcagtta gcggtgcaag tcataattca
    11041 aaaaatgtag aaaaacaaag caatctttta aattcaaatg ctatttcttt aagtgatatc
    11101 agttcacaaa gtcataagca aatagatcaa agttttaaac ttggtgcaaa tgttggcaat
    11161 gaacttggag aacttgctag tttgtcaaat aaagcaaata gtgccaatga aaaatccttt
    11221 ttattattag aacaaatgct taaatctttg tttaatgttg ctaataaagt atcaacagta
    11281 tctcaaaatg aaaatgaatt ggctaaaaaa gttgaaaaca tggtcaatca agcaggtaat
    11341 atacaaaaag caactcaaat gatggatgag atcgcagata aaaccaattt actatcccta
    11401 aatgctggca tagaagcagc tagggctggt gcatttggac gaggtttttc tgtaattgct
    11461 gaggatgtta ggcagttggc tcagaacagt gaagaatttt tgggaaatgt agctcaaatt
    11521 acaaaagagc ttttgcaaag tattaatgag gttagcgcag aattaaagaa aaatgctcaa
    11581 agtgtacaag ctttaaatga tgacaccgct ttattggttg atgatgctaa tgaggttaaa
    11641 ttatgcaacg aagatgctag ggctttggta actcaatgta ctgaaaaaat aaaaatttcc
    11701 caagagaata tacaaaattt actttctcgt atgcaagaaa atgttgaagt aagtgaaaag
    11761 aatgaagaaa tttctaaaat tctgcttcaa gttgcagatg agttaaaaat agtgtgtcat
    11821 aatcttgaaa gcgaacttaa ccaattttaa atttaaagga ataaaatgaa aaaaatgctt
    11881 caaattgctt tagctgcaac tttttttgcg ggttgtgcta gtacttctct tacttcatct
    11941 acttctaaag gtaataatga acttgtgcaa aatcagcttt tcaaaataga aaaaattata
    12001 gtaaatggca aaacttttga tccaaaaaac gcagaggaaa gtccaaatat cagttttgaa
    12061 aataataaat tttatggtta ttcaggatgc aatcgttttt ttggttctta tcaaactaag
    12121 gcggatactt tacaaatcga aggtgatcgc gtagcttcaa ctcaaatgct ttgtcaccca
    12181 atggatgtaa tggattttga aaattctttc ctttcaaatt tcaaaggaac ttttaaaatt
    12241 tcaaatgaaa atggaaaact tgttttaagc aatgatgaaa tgaaaatctt ttttaaataa
    12301 tgccctaaag cctcgaaata tcgaggcaat cttcttaaat ttgacaaaag tctaaaaaat
    12361 gatacaatta taattttatt atcaaaaaag gtagttaaat gataaaatca attcctgaat
    12421 ggagtgagca agaatacctc atgctttctt taccccatga aaaaagcgat tggaatccct
    12481 acttagagga aattttgcaa agttataaag aatttgtaaa agtggtaagt gaatttcaaa
    12541 aagttttact tatagctcct aaacagagtg attttgaaaa ttttaaagat ataaaaaatg
    12601 tagagttttt taaatgtgat accaatgata cttggatacg cgattttgga gctatagata
    12661 tagtagaaaa tggtcgttta aaagctcttg attttacttt taatgcttgg ggaaataaat
    12721 ttcaaagcga gcttgataat gctgtaaatt ctaagctttt taaagaaaaa tttaaagagg
    12781 agcttaaaaa ggttgatttt attttagaag gaggaagtat tgactttaat ggagagggtg
    12841 tgatgcttac aagctctcat tgtcttttaa atgaaaatag aaattctcat ctaaacaaaa
    12901 ctcaaattga tacaaaatta aaagaaattt ttggtttaaa gcaaattatt tggctagaaa
    12961 atggtttcat aaaaggtgat gatacggatc atcatatcga taccttagca agatttatag
    13021 ataaaaatac catagcgcat tgtatttgtg aagatgaaga ggatgagcat tatttgcctt
    13081 tgcaaaaaat gaaagaagag cttaaaaaaa caggctttga tttattagaa cttcctatac
    13141 ctaagccttt atactatgaa gaaagaagat taggagcgac ttatgcgaat tttgttttta
    13201 taaataatgc tttaattgtg cctttttaca aggataaaaa tgatgaaatc atagctaaaa
    13261 gactttctaa agctttacct aatcataaaa ttataggagt agatgcaaga gtgtttttac
    13321 gacaaaacgg ttctttgcat tgttcttgtc aaaatcgttt caaaggttta agatgagttt
    13381 gcaaaaaaaa gcaactcttg tagcaagttt atgtgctatt gttttagcct tggttaaatt
    13441 tatagtaggc ttaacaagtg gttctgttgc agtactttca agtgcgattg attctttaat
    13501 ggattttgct atttctgctt ttaatttttt ggctcttaaa aaaagctcac aaaaggcgaa
    13561 tgaaaattat aattttggtt tttctaaaat tgaagcttta atgggtttgt tagaaggtgt
    13621 ttttatagtt ggcgtgggga tttttatttt ttatgagagt attttaaaga tttattataa
    13681 agaagaaatt aaagatttaa attcaagcat ctatgtgatg atttttgctt taattatgac
    13741 tttttttctt gtactttttt taaattatgt agctaaaaaa accaaaagtt tgattataga
    13801 aagtgatgct ttgcattaca aaacagattg cttaaccaat gcttgtactt taggggcttt
    13861 ggttttgatt tattttacaa atttacatat tattgatgct atttttggga tagtgatcag
    13921 tctttatacg gcattttctg cttttaaaat cattaaaaaa gctttagctt ttttaatgga
    13981 tgaggcttta cctaaggaac aagtggataa aatttgtact ttgatttcta ataatcctga
    14041 aataatttcc tatcatgaat taaagacgcg taaaactcca agttgtaatt atttaagcgt
    14101 gcatttggtt ttttgcccta taatttcgct tttaaatgcg cataaaattt cagatgaaat
    14161 agaagaaggt gtgcgtaaga tgtttgaaaa tgaaaaatgg gatatacaaa ttcatttaga
    14221 tccttatgat gatgcagaac aagaaaggca aagacaatga aaatcgcttt aatacaacaa
    14281 aaatttcatt taaataaaga acaaactata aaaaaaactt gcgaatttat agaagaagcc
    14341 tctaaacaag gagctgagct tgtttgctta ggagaacttc atcaaagtga gtatttttgt
    14401 caaagtgaaa atgtggattt ttttgactat gctaatgatt atgaaaaaga tgtgaaattt
    14461 tgggcaaata tagctagaaa aaatcaaata gtgcttattg cttcattgtt tgaaaaacga
    14521 agtgccggac tttatcataa tactgcagtg gtttttgaaa aagatggttc tatagcaggc
    14581 aaatatcgca aaatgcacat acccgatgat ccttgttttt atgaaaaatt ttattttact
    14641 cctggagatt tgggttttga acctataaat acaagtttag gtaagcttgg agtgcttatt
    14701 tgttgggatc agtggtatcc tgaagcagca agaattatgg ctttaaaagg agctgagatt
    14761 cttatttatc ccacggcaat tggttggttt gataaggata aagatgaaga aaaacaaaga
    14821 cagctcaatg cttggcttgg cgtacaaaaa ggacatgcta tagctaatgg tttatatgta
    14881 gtagctatca atagagtagg ttttgaaaaa gatgtaagcg gggtagaaga gggcattaga
    14941 ttttggggaa attcttttgt ttttggccct caaggtgaag aactttgtct tttagattct
    15001 caaaacgaat gtgtaaaaat catagaaata gataaaaaaa gaagtgaaaa tgtgcgtcgt
    15061 tggtggcctt ttttgcgaga tagacgcata gaatatttta cagatttaac taaaagattt
    15121 attgattaaa tcaataaatc ttatttgttt tgtatatttt caagatagct ttttatttgc
    15181 tctttttctt gttcgtttaa atttataaaa cttatttctt taagtcttga taaaagcaaa
    15241 ttatcttcta aaatttcatt ttttcctatt tctaaagaag tgatgacgct agaacttatg
    15301 agaagtcttt gggttgcatc ttttcttaag ccccatatat tatgtatggc aatattatta
    15361 tctgtaattt gccctgcata aagcataata tgtccaggta aataaagtaa actaagataa
    15421 gctttcccaa agcggtttaa aaaatctttt ttttgagaat tactaagagt gcttatatca
    15481 aaatgattaa aagaattttt ttgtgcagct gaatttcttg gtagataaag tccaaaagct
    15541 gaaaagatat cacgagttag taaagaacaa tctctttcaa aattataacc gccccagcca
    15601 taaggcaaat ttaaaacttg tgaaagttga ttttttaaat ttttatcatt gaattgtaaa
    15661 ggaaatttag atacatcttt tttagaaatt ttatattttt tagaacctat ttttccataa
    15721 aaatagtttt tatcttcttt gtagtaagga tagatagcac caattctact ttcaaataaa
    15781 aatttaccat cctcgctata gatagcaaat ttttctttta gtggtgtgat aaagttgaga
    15841 ttttcataga ttttcgctct atcgtttgag aaaaattcca aatttttact ttcaacaaat
    15901 ccaaatccag cttcacctaa aacaaaagca taacgcttat ctttactaaa atgtgaaatt
    15961 aagacagggg ctccagtatt taaaatgcca tcgcttgcat agtcaaaagg aattccttca
    16021 ttttcaaaaa aaggattttt taagatagct ctttgggttg gaagattttt aatgattgta
    16081 ttttggataa ttaaagcttt ttgattaagt ttaccgaatt cttggatatt tgcgttattt
    16141 atagcgtttt taaaccatga aagtggaata atttgtttat tgaaaaaata ataagtattt
    16201 tttgaattta aatataaagg aaaggaccaa aaaatatttt gtcctttgta atttttaaat
    16261 gaatcatgcc aagggttaaa gaaatatttt ttatatcgtt ttgcatcaaa attaatatcg
    16321 taagcaaatt gtggcaaaat gtttacattt tgttcgtatt caagttttac ataatgttga
    16381 ttttcatttt tttgttctaa attttcacga tgaagtgaag ttaaattttt tgttgaacaa
    16441 gctgttaaaa atagcactat aaaagtaaaa tataaacaag atttcataat caacctttta
    16501 gaaaaaatag ttataattaa agccaaggaa atataatgtt tgataaacta gaaaaaattt
    16561 tagcttatga taatgttttt ttaagtggtg gtgctggagt tggtaaaagc tttttgacaa
    16621 atgagcttat caaatcttat agaaaacaaa aaaaattagc catagctctt ggttctagtg
    16681 ctctatcggc gtttaatata ggcggtgtta ctttacacag ctttttttgt ttagggtatt
    16741 gtgatgatat gatgaaatta agtgtattgg atcgcaatca aaaacaaaaa gaaaaattaa
    16801 caaaacttaa agagctttta aaaacgattg agcttattat tatcgatgaa atttccatgg
    16861 ttagtgcaaa tgtttttgaa atgataggct ttagacttaa aaattctcaa tttaatggaa
    16921 aaattttagt tgttggagat ttttttcaac tgcctccagt aattaaagaa aaaaaagaaa
    16981 ctttatttaa ccattcttat tatgcttttt cttcattttt ttggcaagat ttaaatttta
    17041 agaatattaa actttctcaa cctaaaagaa cgcaaaatat ggaattttat aaccatttat
    17101 ctttgattag acaaggtttt ttagatgaaa aaattttaag cttttttgaa tctttgcgaa
    17161 ttgattataa agaattagaa aatttagaag atgattatac tttactttgt ggtatcaata
    17221 aaaaagtaaa caatatcaat caagaaaaat taagcaaact tgagaccccg cttgtatgct
    17281 ttaaggctca ggttaaaaaa gaagataaga gaataaaaga tgaagagctt gattcttgga
    17341 ttagaagctt aaatatattg gaagaattaa atattaaaat aggcgctcgt attatttttt
    17401 gcgtaaataa ttgggataag aattattata atggagagca aggcattata gaagatattc
    17461 tttatgaaga ggagaaaatt tatattagca ttattaaaaa taatgggatg aaaattttac
    17521 ttgaacctta tacttttttc atggaagaac ttgagcaatc aggtaaagat tttgttgtta
    17581 atattctcgc aagtgttaca cagtttccta ttaaattagc ttatgctatt actatacaca
    17641 aatcacaagg tatgagtatt gaaaaattag tgtgtgatat tgatcatatt tttgaaaatg
    17701 gacagcttta tgtcgctctt tctcgcgcta caaacccaaa tactttaaaa atttattcta
    17761 caaaaaagat aaattttgga ttttattttg ctaatatttt aaaaatagat tctaatgtga
    17821 ttgaatttta taaaaaacat aattttttag atctcgaaat acaagaacaa atcatttaaa
    17881 ggcattaaat gaaaaaaata tttttaagtg tttttttggt tttgagttta aatgctcaaa
    17941 atcttgaaat agataaaata agaacagatt tgtattctaa aagtggagca aatgttctta
    18001 aaaaagttga aatttctttg gaatttgatg ggaataattt aaaagaaaat gaaaataagt
    18061 taattgatgc tgtaaataca gtaatttcag ggttttttta tgaagatatt tttacagaaa
    18121 ttggaaaaaa
//
LOCUS       DAPIYB010000030        17944 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.030, whole genome shotgun sequence.
ACCESSION   DAPIYB010000030 DAPIYB010000000
VERSION     DAPIYB010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17944
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.030"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(6..830)
                     /locus_tag="RJ318_000796"
     CDS             complement(6..830)
                     /locus_tag="RJ318_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430683.1"
                     /translation="MKFFLLVFCFVNLALAKVYKGELHFYHLQDKEIFAIVYDNAPMT
                     PLFDRDKNQTSSSFLIVDDINGNLEIPLVKINDFWQDERKKYKINSSKMLTYDNKNFQ
                     GENLGTTTLELVETQDGIRIKRSLDFIGFNDDFKEFHPVHKGVFSFEQIRQKPIFLQD
                     GKISFEEWYYFYEDGMSRAILELNNFVYDINAHAFVKLNDLYNTENQKFQNLLHEKLK
                     NTCDECFEDLQNLQFNNNFLLNNGKLKICYLPFEGHFLDENICVEFNEDELKEFKK"
     gene            complement(841..1317)
                     /locus_tag="RJ318_000797"
     CDS             complement(841..1317)
                     /locus_tag="RJ318_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430684.1"
                     /translation="MKHCLALCFVFFLCACSVKNQNFSSQSLMVLIASPMIKINDTAF
                     LKKENNALNLEVYKLGQAFFELKIKDKICINVVCYDKQVFNQKFFKNVYYDDILSDIL
                     KANPLWQGKNLEKTDCGFEQNLKAKNYEIFYQVCDNKVSFFDKISHTKIILTHIQN"
     gene            complement(1326..1817)
                     /locus_tag="RJ318_000798"
     CDS             complement(1326..1817)
                     /locus_tag="RJ318_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HDV7430685.1"
                     /translation="MASEHSFDISAALDKQELKNAFEQAKKELDSRYDLKGIKCEIDL
                     SEKESIFKLSSSSEGKLDVLKDIVISKLIKRGINPKAIKELSRESGAMFRLNLKANDA
                     IDSENAKKINKVIKDSKLKVNSSIRGEEIRVAAKQIDDLQAVMKLVKELDLELNISFK
                     NLK"
     gene            complement(1807..2742)
                     /locus_tag="RJ318_000799"
     CDS             complement(1807..2742)
                     /locus_tag="RJ318_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HDV7430686.1"
                     /translation="MKIVCLDAATLGDYDLSVFEKFGSLQIYTTTNKEQTIERLKDAN
                     VAMTNKVVIDKDVIDACKNLKLILETATGVNNIDIEYAKEKGIIVKNAAGYSTMSVVQ
                     HTFAFMFAFLNQVLYYDKWSKEGKWCESPIFTDYSRILNTLSGKKHGIIGLGTIGKEV
                     AKISKAFGAEIYYYSTSGANKNADFVHLELKDLLKTCDIISIHAPLNEKTKNLLAFEE
                     LKLLKDNAILINVGRGGIVNENDLAKIIDEKNIRVGLDVLEIEPMMKNHPLLSIKNKE
                     NLIITPHVAWASKEALNALMDIVYNNLKEWIENGK"
     gene            complement(2745..3914)
                     /locus_tag="RJ318_000800"
     CDS             complement(2745..3914)
                     /locus_tag="RJ318_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HDV7430687.1"
                     /translation="MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISNKLVCVKESEAN
                     AYYEAVNELYDMFIAAAQEVINNDRFDELGIPFNLIDAIKMSWENEVHWHLYGRFDLA
                     GGLDGKPIKLIEFNADTPTALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLI
                     TLDESVEGFEEHYQGWKILFSSVAGSKEEEITTKLLAHIANEAGFQTNFSFVDEVEFS
                     EEGIFKEGENYEYWFKLIPWEDIAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKG
                     ILKILWELYPNHPLLLETKDTPLEGKNYVKKPVFGREGANISIIKDGKTLHENVGPYG
                     NNKAIYQEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD"
     gene            complement(3924..4529)
                     /locus_tag="RJ318_000801"
     CDS             complement(3924..4529)
                     /locus_tag="RJ318_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0323 family lipoprotein"
                     /protein_id="HDV7430688.1"
                     /translation="MKKIKKIIQIGMIGGLAAVAGGALAGCGSNNDNADTLNQAANAQ
                     GAFVIIEETAPGQYKIKDQYPSDETRVVLKDLNGTERILSKEEMDALIKEEAAKIDNG
                     TSNLTKDNGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSA
                     YQRSVNSFNKAGTTSSASSAKKSGFFGGGSKATSSSSSFGS"
     gene            complement(4649..4861)
                     /locus_tag="RJ318_000802"
     CDS             complement(4649..4861)
                     /locus_tag="RJ318_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDV7430689.1"
                     /translation="MPGIKVHPNESFDEAYRKFKKQVDRNLVVTEVRARRFFEPMTEI
                     RKKQKISARKKMLKRLYMLRRYESRL"
     gene            5021..6397
                     /gene="ccoG"
                     /locus_tag="RJ318_000803"
     CDS             5021..6397
                     /gene="ccoG"
                     /locus_tag="RJ318_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HDV7430690.1"
                     /translation="MQGHITNYTKKRYFVYLIASIIIFSLPFIRINENHFFLLSFDHS
                     KLNLFFISFSTQEFYLMPFVLIFLFLFIFFITTLGGRIWCAWSCPQTIFRVIYRDIIQ
                     TKFLKIRKNINNKQKEYERQYFKKFLGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQN
                     PGEHLLLLGILFCASLLFTLDITYLQEKFCVYVCPYARIQSVMFDHDTMQVIYDEKRG
                     GLIYDGHTKLHKKPPEGECIGCEACVSICPTHIDIRKGMQLECINCLECADACSKVQS
                     KFNRPSLINWTSAKAIETRSKVHYLRFRTIAYFIVLLIALLALIIMGSKKESMLLNIN
                     RSSELYNISNVKGELVISNAYTFLFQNTDSKPHEYYFTANLEGINDGIEIIRPNKPFK
                     LKAGEQVKKIVVIRATKNLANNDKKDVIFPLHIKAYAKDNEKISVFRKSIFVYPKSTL
                     IKDKNELK"
     gene            6384..7016
                     /gene="cmeR"
                     /locus_tag="RJ318_000804"
     CDS             6384..7016
                     /gene="cmeR"
                     /locus_tag="RJ318_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     regulator CmeR"
                     /protein_id="HDV7430691.1"
                     /translation="MNSNRTPSQKVLARQEKIKAVALELFLTKGYQETSLSDIIKLSG
                     GSYSNIYDGFKSKEGLFFEILDDICKKHFHLIYSKTQEIENGTLKEILTSFGLAFIEI
                     FNQPEAVAFGKIIYSQVYDKDRHLANWIENNQQNFSYNILMGFFKQQNNSYMKKNAEK
                     LAVLFCTMLKEPYHHLNVLINAPLKNKKEQKEHVEFVVNVFLNGINSSKA"
     gene            7111..8214
                     /gene="cmeA"
                     /locus_tag="RJ318_000805"
     CDS             7111..8214
                     /gene="cmeA"
                     /locus_tag="RJ318_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit CmeA"
                     /protein_id="HDV7430692.1"
                     /translation="MKLFQKNTILALGVVLLLTACSKEEAPKIQMPPQPVTTMSAKSE
                     DLPLSFTYPAKLVSDYDVIIKPQVSGVIENKLFKAGDKVKKGQTLFIIEQDKFKASVD
                     SAYGQALMAKATFENASKDFNRSKALFSKSAISQKEYDSSLATFNNSKASLASARAQL
                     ANARIDLDHTEIKAPFDGTIGDALVNIGDYVSASTTELVRVTNLNPIYADFFISDTDK
                     LNLVRNTQNGKWDLDSIHANLNLNGETVQGKLYFIDSVIDANSGTVKAKAIFDNNNST
                     LLPGAFATITSEGFIQKNGFKVPQIAVKQNQNDVYVLLVKNGKVEKSSVHISYQNNEY
                     AIIDKGLQNGDKIILDNFKKIQVGSEVKEIGAQ"
     gene            8214..11324
                     /gene="cmeB"
                     /locus_tag="RJ318_000806"
     CDS             8214..11324
                     /gene="cmeB"
                     /locus_tag="RJ318_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit CmeB"
                     /protein_id="HDV7430693.1"
                     /translation="MFSKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTV
                     KVSATYTGADAQTIASTVASPIEDAINGADNMIYMDSTSSSSGTMSLTVYFDIGTDPD
                     QATIDVNNRISAATAKMPDAVKKLGVTVRKTSSTTLAAISMYSSDGSMSAVDVYNYIT
                     LNVLDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYAT
                     GKIGEEPVTQKSPYVYSITMQGRLQNPSEFENIILRTNNDGSFLRLKDVADVEIGSQQ
                     YSSQGRLNGNDAVPIMINLQSGANALHTAELVQAKMQELSKNFPKGLTYKIPYDTTKF
                     VIESIKEVVKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSI
                     NLLTLFALILAIGIVVDDAIIVVENIDRILHENEQISVKDAAIQAMQEVSSPVISIVL
                     VLCAVFVPVSFISGFVGEIQRQFALTLAISVTISGFVALTLTPSLCALFLRRNEGEPF
                     KFVKKFNDFFDWSTSVFSAGVAYILKRTIRFVLIFCIMLGAIFYLYKAVPSSLVPEED
                     QGLMIGIINLPSASALHRTISEVDHISQEVLKTNGVKDAMAMIGFDLFTSSLKENAAA
                     MFIGLKDWKDRNVSADEIAMELNKKFAFDRNASSIFIGLPPIPGLSITGGFEMYVQNK
                     SGKSYDEIQKDVNKLVAVANQRKELSRVRTTLDTTFPQYKLIINRDKLKHYNLNMQDV
                     FNTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDALKNIFVRSNDGKMIPLDSF
                     LTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKETLGDDYSIAWSG
                     SAYQEVSSKGTASYAFALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLR
                     GFSNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKGVFEAAVAAAKLRFRPIIM
                     TSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENFNEW
                     LDKKKR"
     gene            11330..12808
                     /gene="cmeC"
                     /locus_tag="RJ318_000807"
     CDS             11330..12808
                     /gene="cmeC"
                     /locus_tag="RJ318_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit CmeC"
                     /protein_id="HDV7430694.1"
                     /translation="MNKIISISAIASFTLLISACSLSPNLNIPEANYSIDNKLGALSW
                     EKENNSSITKNWWKDFDDENLNKVVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLP
                     KFDGSASGSRAKTAINAPSNRTGEVSYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGF
                     KASEYDYEAARLSVISNTVQTYFNLVNAYENENALKEAYKSAKEIYRINDEKFQVGAV
                     GEYELAQARANLESMALQYNEAKLNKENYLKALKILTSNDLNDILYKNQSYQVFNLKE
                     FDIPTGISSTILLQRPDIGSSLEKLTQQNYLVGVARTAFLPSLSLTGLLGFESGDLDT
                     LVKGGSKTWNIGGNFTLPIFHWGEIYQNVNLAKLNKDEAFVNYQNTLITAFGEIRYAL
                     VARKTIRLQYDNAQASEQSYKRIYEIAKERYDIGEMSLQDYLEARQNWLNAAVAFNNI
                     KYSYANSIVDVIKAFGGGFEQSEDTSKNIKEESKNLDMSFRE"
     gene            complement(12831..13082)
                     /locus_tag="RJ318_000808"
     CDS             complement(12831..13082)
                     /locus_tag="RJ318_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430695.1"
                     /translation="MDKAKIVQNLNALFKQRAEFYSYFDENIAKINNTEVFDFKNAKN
                     LNPEEVYKQFYHFDYAIRKLLPAIYKAYEITDADLDKDF"
     gene            13211..14557
                     /locus_tag="RJ318_000809"
     CDS             13211..14557
                     /locus_tag="RJ318_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HDV7430696.1"
                     /translation="MNLFQNLALKYSHTMMEKSLQKGFNVELLKQPEEKIPKQDKSYM
                     LYAHVPFCHTFCPYCSFHKYYYDENLAKVYFQNLREEIKIMKNKGFDFTSMYVGGGTT
                     LIDEEELLKTLELCKKLFNIKEISCESDPNHIDPNKLSMFKGIIDRLSCGIQSFDDET
                     LKKVARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQNEKQLLNDLEIAKNLAP
                     QQITTYPLMKSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYTQNNGWSFSLEKNK
                     LNDEYVSSHHEYLGVGSGAFSFLDGELLINAFNLNDYAKFIQEKQNANIAKACFDKKE
                     IIKYVFLTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSGAIIKDQNALIATEFG
                     QYLFVVLMKDFYTGMDLVRAVFRDDKRLKNKDYIDIMKENIDPLNSASMEFKAETN"
     gene            complement(14554..15006)
                     /gene="hemJ"
                     /locus_tag="RJ318_000810"
     CDS             complement(14554..15006)
                     /gene="hemJ"
                     /locus_tag="RJ318_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HDV7430697.1"
                     /translation="MTEWINDYYFWIKWVHYLAFVSWMAGLFYLPRLFVYHAEHKDNK
                     GFVEVVKIQERKLYYYIQTPAMIVTLITGSLMLHAHKEVLMVGAGFMHVKLTCVTLLI
                     IFHIHNYYCLKALANDTSTKSGKYFRIYNEFPTIMFIIIALMMVVRPF"
     gene            complement(14990..15460)
                     /locus_tag="RJ318_000811"
     CDS             complement(14990..15460)
                     /locus_tag="RJ318_000811"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HDV7430698.1"
                     /translation="MAKTFKFIFYFWGAFVLVFALDQWVKSLTLAGFRWQSEYLDLTY
                     ALNTGVAFSMLSFLEHNLKYLHLALIGVLFIYLFWQRTLLKTHSIAFGMMLGAGVSNL
                     LDRFIHGGVVDMFFWHKWFNFAIFNVADVMINISVALILIQEIFKKRKKDDRMD"
     gene            complement(15453..16790)
                     /locus_tag="RJ318_000812"
     CDS             complement(15453..16790)
                     /locus_tag="RJ318_000812"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDV7430699.1"
                     /translation="MRLFGTDGVRGKAGEFLDSFLAMRLAMAAGIYFKDKSITNNILV
                     GKDTRRSGYMIENAIVSGLTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNP
                     YYDNGIKFFDAHGNKLSEDIEKKIEEIYFDDKLIQASKVDMEKIGQAKRIDDVIGRYI
                     VSIKNSFPKDLTLKSLRVVLDVAHGAAYKVAPTVFKELGAEVIVMSDKPNGLNINENC
                     GALHPVNLAAEVKRLRADVGFAFDGDADRLVVVDEKGEVANGDSLLGVLALYLKEQGK
                     LQSSVVATIMSNGALKEFLNKHGIELDTCNVGDKYVLEKLKANGGNFGGEQSGHIIFS
                     DYAKTGDGLIAALQFSALMLSKKKSASSILGQVKPYPQLLINLKIAEKKDLDKIKGLK
                     ELKKDLENKNINTLFRYSGTENLIRLLLEARDIKLLEKEMKNVVEFFKKALNG"
     gene            complement(16884..17909)
                     /locus_tag="RJ318_000813"
     CDS             complement(16884..17909)
                     /locus_tag="RJ318_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HDV7430700.1"
                     /translation="MKVKLLLIASLVAFSSLNAASLIDEAKNSGLVTLPKDQKGVDEI
                     LKQNGVKASEFTLEKAELGKKLYFEPRLSKSGIISCNTCHNVGLGGTDGVSTAIGHKW
                     TANPHHLNSPTVYNAVLNNTQFWDGRAGTLADQAKGPIQADPEMATPAKLAVEKISSL
                     PEYVSEFKKIYGKSGVNFDNIADAIANFERTLITPSRFDKFLEGDEKALTKEEQKGLK
                     LFIDKGCVACHNGVNLGGNMQAFEVAGKYKFANLGDFKGDANGMVKTPTLRNVAETAP
                     YFHNGAIWNLKDAIKEMGSVQLGIKISDKEAKSIETFLKSLTGTKPAIVYPQLPISTE
                     KTPKPEL"
BASE COUNT         6318 a         2977 c         2489 g         6160 t
ORIGIN      
        1 ttccattatt ttttaaattc cttaagctca tcttcattaa attctacgca aatattttca
       61 tctaaaaaat gaccttcaaa aggtagataa caaattttta gttttccatt attaagcaaa
      121 aaattattat taaattgtaa attttgcaga tcttcaaaac actcatcaca tgtattttta
      181 agcttctcat gtaaaagatt ttgaaatttt tgattttcag tattatataa atcatttagt
      241 tttacaaacg cgtgagcatt aatatcataa acaaaattat tcaactctaa aatagcacga
      301 ctcataccat cttcataaaa ataataccat tcttcaaaac taatttttcc atcttgtaaa
      361 aaaataggtt tttggcgaat ttgttcaaaa ctaaatacac ccttatgaac aggatgaaat
      421 tctttaaaat catcattaaa acctataaaa tcaagactac gctttatacg aatgccatct
      481 tgcgtttcga caagttctaa agtagttgtt cctaaatttt ctccttgaaa atttttatta
      541 tcatatgtaa gcattttaga agaattgatt ttatattttt tacgctcatc ttgccaaaaa
      601 tcatttatct taacgagtgg aatctctaaa tttccattta tatcatcaac aattaaaaaa
      661 ctagaacttg tttgattttt atccctgtca aaaagtggag tcataggtgc attatcataa
      721 actatggcaa aaatttcttt atcctgtaaa tgataaaaat gcaattcacc tttataaact
      781 ttcgctaaag ctagatttac aaagcaaaat accagtaaaa aaaatttcaa actctatcct
      841 tcaattttga atatgcgtta agataatttt agtatgtgaa attttatcaa aaaaacttac
      901 tttattatca caaacttgat aaaaaatttc ataatttttt gcttttaaat tttgttcaaa
      961 accacaatca gttttttcta aatttttacc ctgccataaa ggatttgcct ttaaaatatc
     1021 acttaaaata tcatcataat atacattttt aaaaaatttt tgattaaaca cttgtttatc
     1081 ataacacact acattgatac aaattttatc tttgattttg agttcaaaaa aagcttgccc
     1141 tagtttataa acttctaaat ttaaagcatt attttctttt tttaaaaaag ctgtatcatt
     1201 gatttttatc ataggggaag caatcaaaac catcaagctt tgacttgaaa aattttgatt
     1261 tttcacacta caagcacaaa gaaaaaaaac aaaacataga gctaaacaat gtttcaaatt
     1321 tgaccttatt tgagattttt aaaactaata tttaactcta aatcaagctc ttttacaagc
     1381 ttcatcacag cttgtaaatc atcgatttgt tttgctgcaa cacgaatttc ttcaccacga
     1441 atcgaagaat taactttaag cttgctatct ttaataactt tattgatttt tttagcattt
     1501 tcactatcaa tagcatcgtt tgctttcaaa tttaaacgaa acattgctcc actttcacga
     1561 gaaagctctt taatagcttt aggattaatt cctcttttga taagtttaga aatcactata
     1621 tcttttaaaa catcaagttt tccttcacta gaagaactga gtttaaaaat actctctttt
     1681 tcgcttaaat caatctcaca cttaattcct tttaagtcat aacgactatc aagttctttt
     1741 ttagcttgtt caaaagcatt ttttaactct tgtttatcta aagctgctga aatatcaaaa
     1801 ctatgttcac ttgccatttt ctatccattc ttttaaatta ttataaacta tatccattaa
     1861 agcatttaaa gcctccttgc tcgcccacgc aacatgagga gtgataataa gattttcttt
     1921 atttttaatg cttaaaagtg gatgattttt catcataggt tcaatttcta aaacatcaag
     1981 ccctacacga atattttttt catctatgat tttagctaaa tcattttcat tgacaatccc
     2041 acctcttcct acattaatca aaatcgcatt atcttttaaa agctttaatt cttcaaaggc
     2101 gagtaaattt ttggtttttt catttaaagg tgcgtggata cttataatat cgcaagtttt
     2161 taataaatct tttaattcca aatgtacaaa atctgcgttt ttattagctc cactcgtaga
     2221 ataataataa atttcggctc caaaagcctt tgaaattttt gccacttctt tacctatggt
     2281 tcctaaacct ataataccat gttttttacc acttaaggtg tttaaaattc tactataatc
     2341 tgtaaaaata ggactttcac accatttacc ctctttgctc catttgtcat aataaagcac
     2401 ttgatttaaa aaagcaaaca taaatgcaaa agtatgttgc accacactca tagtagaata
     2461 cccagcagca ttttttacaa taataccttt ttctttagca tactcaatat cgatattatt
     2521 aacccctgta gcagtttcca aaatgagttt taaattttta caagcatcaa tcacatcttt
     2581 atcaattaca accttgtttg tcatggcgac attagcatct tttaaacgct ctatggtttg
     2641 ctctttattt gttgtggtat aaatttgcaa agaaccaaat ttttcaaaaa cacttaaatc
     2701 ataatcccct aaagttgccg catctaaaca aacaattttc atttctaatc ctttataata
     2761 tgtcctacaa atttagaata attatcaagc acaagtcctc cttttctaaa tcctaagcca
     2821 cacccttcat aagcaaagaa aacacctgct tgatagtatt cgttttcaca tgaattaaac
     2881 tctacatatt cttgataaat agccttatta ttcccataag gacctacatt ctcatgcaaa
     2941 gtttttccat ctttaattat actgatattt gcaccttctc taccaaaaac aggtttttta
     3001 acatagtttt taccttccaa aggagtatct tttgtttcta aaagtaatgg atgatttgga
     3061 taaagttccc atagaatttt taaaattccc ttagattgaa ataaaagcgt ataagcagga
     3121 tttaaaataa ttgctctttg attacgcatg atttgagtta aaagcatagc aagttcaccc
     3181 tcttctatgg ctatatcttc ccaaggaata agcttaaacc aatactcata attttcaccc
     3241 tctttaaaaa ttccttcttc actaaattct acctcatcta caaaggaaaa attagtttga
     3301 aaacctgctt cattggctat atgtgcaagc aattttgtag tgatttcctc ttctttactt
     3361 cctgcaacac ttgaaaaaag aattttccat ccttgataat gctcttcaaa cccttcaaca
     3421 ctttcatcaa gggtaataag tcttttaaaa ttatccatca aactttcata aatgctgtta
     3481 aattgtgcgc tttcatccat tccattttgt tttaaaagtg cccattgtaa aatcgcactt
     3541 tcaaaaagag cagtaggggt atcagcatta aattctataa gttttatagg cttgccatca
     3601 agtccacccg ctaaatcaaa acgcccatat aaatgccaat gaacctcatt ttcccaactc
     3661 atcttaatcg catcaataag attaaaagga attccaagct catcaaaacg atcattatta
     3721 atcacttctt gcgctgcagc aataaacata tcataaagct catttaccgc ttcataataa
     3781 gcattagctt cactttcctt aacacaaact aacttattgc taatataatc acttccatct
     3841 tcatctgtat gccaagaaaa acctatattt tctaaataat ctttttgaag tttgtctact
     3901 tgtaataatt gcattattta tccttaagag ccaaaagaag aactagaact tgtggcttta
     3961 gagcctccac caaaaaaacc tgatttttta gcacttgaag cagagcttgt tgtgcctgct
     4021 ttattaaaac tattaacact cctttgataa gcactttgat ttgaaaaagc accgcgttgt
     4081 tggttggcaa aattttgatt attgaaaagt tttgaaccta tccaacttcc taaaatagca
     4141 cctgcagcac ttgcgagtaa agtttcccct aaactcaatc ccccactact gatttgtcca
     4201 ttgtctttag ttaaatttga agttccatta tcaattttag ctgcttcttc tttaatcaaa
     4261 gcatccattt cttctttgga taaaattctt tctgtaccat taagatcttt taaaactacc
     4321 cttgtttcat cacttggata ttgatctttg attttatact gccctggagc tgtttcttcg
     4381 ataattacaa aagctccttg agcattagcc gcttgattta aagtatctgc attgtcatta
     4441 ttacttccac aacctgctaa agcacctcca gcaacagctg ctaaaccacc tatcatacca
     4501 atttgaatga tttttttgat ttttttcata agtttatcct aaaaacagaa aatttaaatt
     4561 agaaatttta acaaaaaata ataaatactt tttaatttaa taccaaatga agtttgtaga
     4621 tataaaaaag ccctttcggg cttttgggtt agagtcttga ctcgtagcgt ctaagcatat
     4681 aaagtctttt aagcattttt ttgcgtgctg aaattttttg ttttttgcga atttcagtca
     4741 taggctcaaa aaatcttctt gctcttactt cagtcacaac tagatttcta tctacttgtt
     4801 ttttgaattt acgatacgct tcatcaaaag actcgttagg atgcaccttg attcctggca
     4861 cagtcctcac cacctttctg tgtaaatttt tgttgtgaaa tataattata aaacacttct
     4921 tattaattct aacttagaaa gcatttaaaa attgttttag tttttatcgg ttataatcct
     4981 taattacaaa gtgctaaaaa attataatta aggtctaaaa atgcaaggac acattacaaa
     5041 ctatacaaaa aaacgatatt ttgtatattt aattgcaagt attatcatat tttccctacc
     5101 tttcataaga attaatgaga atcatttttt tcttttaagt tttgatcatt ctaaattaaa
     5161 cctatttttt atttcttttt caacacaaga attttatctc atgccttttg ttcttatatt
     5221 tcttttttta tttatttttt ttattacaac tttaggtgga agaatttggt gtgcttggag
     5281 ttgtccacaa acgattttta gagttatata tagagatatc atacaaacta aatttcttaa
     5341 aattcgcaaa aatatcaata acaaacaaaa agaatatgag aggcaatatt ttaaaaaatt
     5401 tcttggagtg ataatttttt attttatatc tttagttgct gttagtaatt tactttggta
     5461 ctttattcct cctgaagatt ttttcaatta tattcaaaat cctggcgagc atctactttt
     5521 acttggaatt ttattttgtg ctagcttact ttttactttg gatattacct atttacaaga
     5581 aaaattttgt gtttatgtct gtccttatgc aagaatacaa tctgtaatgt tcgatcatga
     5641 tacaatgcaa gtgatctacg atgaaaaacg cgggggcttg atctatgatg gacacaccaa
     5701 acttcataaa aaaccgcctg agggagaatg cataggttgc gaagcctgtg ttagtatctg
     5761 tccaactcat attgacatac gcaaaggaat gcaacttgaa tgtattaatt gtcttgaatg
     5821 tgccgatgct tgctctaagg ttcaaagcaa atttaatcgt ccaagtttga tcaattggac
     5881 aagtgcaaaa gctattgaaa cgcgttctaa ggttcattat ttaagattta gaacgatagc
     5941 atattttata gttcttttaa ttgctttact ggctttaatc atcatgggaa gcaaaaaaga
     6001 aagcatgctt ttaaatatca atcgtagtag tgaattatat aatatttcaa atgttaaagg
     6061 tgaattagtc atttcaaatg cttatacctt tttgtttcaa aatacagatt ctaaacctca
     6121 tgaatattat tttacagcaa atttagaagg aataaatgat ggaattgaaa tcataagacc
     6181 aaacaaacct tttaaattaa aagcaggaga acaagtcaaa aaaatagttg ttatcagggc
     6241 tacaaaaaat ttagcaaata atgataaaaa agacgtaatc tttcctttac atataaaagc
     6301 ttacgcaaag gataatgaaa aaatttcggt ttttagaaaa agtatatttg tataccctaa
     6361 aagcactctt ataaaggata aaaatgaact caaatagaac accatcacaa aaagttttag
     6421 ccagacaaga aaaaatcaaa gcagtggcct tagagctttt tttaacaaaa ggataccaag
     6481 aaacaagttt gagtgatatt attaaattat ctggaggatc ttattctaat atttatgatg
     6541 gttttaaaag taaagaaggg ctattctttg aaattttaga tgacatatgt aaaaaacact
     6601 ttcatcttat ttattccaaa acacaagaaa ttgaaaatgg cactttaaaa gaaattttaa
     6661 cttcttttgg tttagctttt atagaaattt tcaatcaacc agaagctgta gcttttggta
     6721 aaattatcta ttctcaagtt tatgacaaag atagacatct tgccaattgg atagaaaata
     6781 atcaacaaaa tttttcctat aacatactta tgggtttttt caagcaacaa aataattctt
     6841 atatgaaaaa aaatgcagaa aaacttgctg ttcttttttg cactatgtta aaagaacctt
     6901 atcatcatct taatgtttta attaacgctc ctttgaaaaa taaaaaagaa caaaaagaac
     6961 atgttgaatt tgttgtaaat gtttttctaa atggaatcaa tagctccaaa gcttaaaaaa
     7021 taattttatt aaccaaaatt aagatataat tagccaaaaa tttttgtaat aaaaattaca
     7081 atttttaatt taatttttca aggcaaaacc atgaaattat ttcaaaaaaa tactatttta
     7141 gctttaggtg ttgtgctttt actcactgct tgcagcaaag aagaagcacc aaaaatacaa
     7201 atgccgcctc aacctgtaac aaccatgagt gctaaatctg aagatttacc acttagtttt
     7261 acttaccctg ctaaacttgt cagtgattat gatgtcatta taaagcctca agttagtggc
     7321 gtaatagaaa ataaactttt taaagctgga gataaagtaa aaaaaggaca aacattattt
     7381 attatagaac aagacaaatt taaagctagt gttgattcgg cttacggaca agctttgatg
     7441 gctaaggcaa ctttcgaaaa tgcaagcaag gattttaatc gttctaaagc tctttttagt
     7501 aaaagtgcaa tctctcaaaa ggaatacgac tcttctcttg ctacatttaa caattcaaaa
     7561 gctagtctag caagtgctag agcacagctt gcaaatgcaa gaattgatct agatcatacc
     7621 gaaataaaag ctccttttga tggtactata ggagatgctt tagttaatat aggagattat
     7681 gtaagtgctt caacaactga actagttaga gttacaaatt taaatcctat ttacgcagat
     7741 ttctttattt cagatacaga taaactaaat ttagtccgca atactcaaaa tggaaaatgg
     7801 gatttagaca gcattcatgc aaatttaaat cttaatggag aaaccgttca aggcaaactt
     7861 tattttattg attctgttat agatgctaat agtggaacag taaaagccaa agctatattt
     7921 gacaacaaca actcaacact tttaccaggt gcttttgcaa caattacttc agaaggtttt
     7981 atacaaaaaa atggctttaa agtgcctcaa atagctgtta aacaaaatca aaatgatgtt
     8041 tatgttcttc ttgttaaaaa tggaaaagta gaaaaatctt ctgtacatat aagctaccaa
     8101 aacaatgaat atgccattat tgacaaagga ttacaaaatg gcgataaaat cattttagat
     8161 aactttaaaa aaattcaagt tggtagcgaa gttaaagaaa ttggagcaca ataatgtttt
     8221 ctaaattttt tatcgaaaga cctgtttttg cttcagttgt tgcaattatc atttctttag
     8281 ctggagctat aggtcttaca aatttaccta tagaacaata tccttcttta acccctccta
     8341 cagttaaagt aagtgcaact tacacaggag ctgatgcaca aaccattgct tcaacagttg
     8401 caagtcctat cgaagatgca atcaatggcg cagataatat gatttacatg gattcaactt
     8461 caagttcttc aggaactatg agtttgactg tttattttga tatcggtaca gatcctgatc
     8521 aagccaccat agatgttaat aatagaattt cagccgcaac tgcaaaaatg ccagatgcag
     8581 ttaaaaaact tggagtaaca gttagaaaaa cttcctcaac aacacttgct gcaatttcta
     8641 tgtattcaag tgatggctca atgagtgcag tagatgtata taactatatc actttaaatg
     8701 ttttagatga gttaaaaagg gttccaggag ttggagatgc aaacgctata ggaaatcgta
     8761 attattcttt aagaatttgg ctcaagcctg atttattaaa taaatttgga atcacagcta
     8821 ctgatgtaat ttctgcggtt aatgaccaaa atgcccaata cgcaactggt aaaattggcg
     8881 aagaacctgt aacccaaaaa tccccttatg tttattcaat cactatgcaa ggaagactac
     8941 aaaatcctag tgaatttgaa aacattattt taagaacaaa taatgatgga tcatttttaa
     9001 gacttaaaga tgtagctgat gtggaaatag gatcacaaca atacagctca caaggacgat
     9061 taaatggcaa tgatgcagtt ccaattatga tcaatcttca atcaggggca aacgcattgc
     9121 atacagcaga acttgttcaa gctaaaatgc aagaactttc aaaaaatttt ccaaaaggtt
     9181 taacatataa aattccttac gatacaacaa aatttgtaat agaatcaatc aaagaagttg
     9241 ttaaaacttt tgttgaagct ctaattttag ttatcattgt tatgtatatg ttcttaaaga
     9301 atttccgtgc aacacttatt cctatgatag ctgtacctgt ttcattgtta ggaacttttg
     9361 ctggacttta tgttttaggt tttagtatta acttgcttac gctttttgct ttaattttag
     9421 ccatagggat cgttgtagat gatgcgatta tagttgtaga aaatattgat aggattttac
     9481 atgaaaatga gcaaataagc gtaaaagatg ctgctatcca agcgatgcaa gaagttagct
     9541 ctccggttat ttcaattgtt cttgtgcttt gtgctgtttt tgtaccagtt tcttttatat
     9601 caggttttgt tggagaaatt caaagacaat ttgctcttac cttagctata tctgtaacca
     9661 tatcaggttt tgttgctctt accttaacac cttctttatg tgcactcttt ttgcgacgta
     9721 atgaaggaga gccatttaaa tttgtaaaga aatttaatga tttttttgat tggagtacct
     9781 ctgtatttag cgcaggagta gcatatattc taaaaagaac cattcgtttt gttttaattt
     9841 tttgtattat gcttggggca attttttatc tctataaagc tgtaccaagc tctttagttc
     9901 ctgaagaaga tcaaggtttg atgattggca ttatcaacct tccttcggct tcagcactcc
     9961 atagaacaat ctcagaagtt gatcacataa gccaagaagt tttaaaaact aatggagtta
    10021 aagatgcaat ggctatgata ggatttgatc tttttacaag ttcactcaaa gaaaatgccg
    10081 ctgcaatgtt tataggcttg aaagattgga aagatagaaa tgtgagtgct gatgaaatcg
    10141 ccatggagct taataaaaaa tttgcttttg atcgcaatgc ttcaagtata tttataggcc
    10201 tacctcctat acctggatta agtatcacag gcggttttga aatgtatgtt caaaacaaaa
    10261 gcggaaaaag ctatgatgaa atacaaaaag atgtaaataa acttgttgct gtggccaacc
    10321 aaagaaaaga gctatcaaga gtaagaacaa cccttgatac aactttccct caatacaagc
    10381 ttataattaa tagagataaa ttaaaacact acaatcttaa catgcaagat gtttttaaca
    10441 cgatgaatgc aactataggc acttattatg ttaatgattt ttctatgcta ggtaaaaact
    10501 tccaagtaaa tatccgcgca aaaggtgatt ttagaaatac acaagatgca ttaaaaaata
    10561 tttttgtaag atcaaatgat ggaaaaatga taccacttga ttctttctta actttacaaa
    10621 gaagttcagg gcctgatgat gtaaaacgat tcaacctttt cccagcggca caagttcaag
    10681 gtcaacccgc accaggttat acttcaggtc aagctataga agcgattgct caagtagcaa
    10741 aagaaacttt aggggatgat tattccatag cttggagtgg atcagcttat caagaagttt
    10801 ctagtaaagg aacagcaagt tatgcttttg ctttaggtat gatatttgtc tttttaattc
    10861 tagctgccca atatgaaaga tggcttatac ctttagcagt tgtaacagct gtaccttttg
    10921 cggtatttgg atcattttta ttggtatatt taaggggatt tagcaatgac atatattttc
    10981 aaacaggact tttgctcttg attggacttt cagctaaaaa tgctatctta atcgtagaat
    11041 ttgcaatgga agagcgcttt aaaaaaggca aaggagtttt tgaagcagct gttgcagcag
    11101 caaaacttcg ttttcgtcct atcataatga cttctttggc atttactttt ggggtcttgc
    11161 caatgatttt cgcaacagga gcaggaagtg cttcaagaca ctctttagga acagggctta
    11221 ttggtggaat gatcgcagca tcaactttag cgatattctt tgtgccttta tttttctatc
    11281 ttttagaaaa ttttaatgaa tggctagata aaaaaaagag gtaaggttca tgaataaaat
    11341 aatttcaatt agtgctatag caagttttac tcttttgatt tcagcttgct ctttaagtcc
    11401 aaatttaaat attcccgaag caaactatag cattgataat aagcttggag ccttatcttg
    11461 ggaaaaagaa aacaatagct ctatcacaaa aaattggtgg aaagactttg atgatgaaaa
    11521 tttaaataaa gtggttgatt tagcacttaa aaataataat gatttaaaac ttgctttcat
    11581 acacatggaa caagctgctg ctcaattagg tatagatttt agcagtttgt tgccaaaatt
    11641 tgatggtagc gcaagcggaa gtcgtgcaaa aacagctata aatgctccaa gcaatcgaac
    11701 tggggaagta agttacggta atgattttaa aatgggactt aatttaagct atgaaatcga
    11761 tctttgggga aaatatcgcg atacatatcg cgcctcaaaa tcaggcttta aagcaagtga
    11821 gtatgattat gaagctgcaa gactttctgt tatttcaaat acagttcaaa cttattttaa
    11881 tcttgtaaat gcttatgaaa atgaaaatgc tcttaaagaa gcctataaat ctgcaaaaga
    11941 aatttatagg attaatgatg aaaaatttca agttggtgct gtaggtgaat atgaacttgc
    12001 tcaagcaaga gccaacttag aaagtatggc tttgcaatat aatgaagcaa agttaaataa
    12061 agaaaattac cttaaagctt taaaaatttt aacttcaaat gatttaaatg acatacttta
    12121 caaaaatcaa agctatcaag tttttaatct taaagaattt gacattccaa ctggaatttc
    12181 aagtaccatc ttgcttcaac gtccagatat tggctcttct ttagaaaaat taactcagca
    12241 aaattatctt gttggagtag ctcgcacggc tttcttacct agcctttctt taacaggatt
    12301 attgggattt gaaagcgggg atttagatac cttggttaaa ggaggttcta agacttggaa
    12361 tataggtgga aactttactc tgcctatttt tcattggggt gaaatttacc aaaatgtaaa
    12421 tttagccaag cttaataaag atgaagcttt tgtaaattat caaaatactt tgattactgc
    12481 ttttggagaa attcgctatg ctttagtagc tagaaaaact atacgcttac aatacgataa
    12541 tgcacaagca agcgaacaat cttacaaaag aatctatgaa attgctaaag aacgctatga
    12601 tataggagaa atgtctttgc aagattattt agaggcacgt caaaattggc ttaatgctgc
    12661 ggttgctttt aataatatta aatattctta tgccaattcc atagtagatg taatcaaagc
    12721 atttggtgga ggatttgagc aaagtgaaga tacgagtaaa aatataaaag aagaatcaaa
    12781 aaatttagat atgtctttta gagaatagtt tgttctattc tctaaataaa ttaaaaatct
    12841 ttgtctaaat ctgcatctgt aatttcataa gccttgtaaa tagcaggcaa taattttctt
    12901 atagcataat caaaatgata aaattgctta tatacctctt ctggatttaa atttttagca
    12961 ttcttaaaat caaatacttc agtattattg attttggcaa tattttcatc aaaataagag
    13021 taaaactctg ctctttgttt aaacaaagca tttaaatttt gaacaatttt ggctttatcc
    13081 atttttatat cctttttaaa taatttaaaa acttaatccc attttttatt taagaaataa
    13141 aaaatttact cctattttag ctaaaaattg ataaagttat gtcttaaata ttttaatata
    13201 taggccactt atgaatttat ttcaaaattt agctttaaaa tactctcata ctatgatgga
    13261 aaaatccctc caaaaaggtt tcaatgtcga acttttaaaa caacccgaag aaaaaattcc
    13321 aaaacaagac aaaagctata tgctttatgc ccatgtacct ttttgccata ctttttgtcc
    13381 ttattgtagc tttcataaat attattatga tgaaaattta gccaaagtat attttcaaaa
    13441 tcttagagaa gaaattaaaa tcatgaaaaa taaaggtttt gattttacct ccatgtatgt
    13501 gggtggtggt acaacactga ttgatgaaga ggaattatta aaaaccttag aactttgtaa
    13561 aaagttattt aatataaaag aaatttcatg cgaaagcgat ccaaatcata ttgatccaaa
    13621 taagctttct atgtttaaag gtataattga tcgtttaagt tgcgggattc aaagttttga
    13681 tgatgaaact ttgaaaaaag tggcaagata taataaattt ggttcatcta aagaacttca
    13741 agaaaaaatt tcaaaagctt taggaatttt acctattttt agtatagatc ttattttcaa
    13801 tcttccagga caaaacgaaa aacaactttt aaatgactta gaaattgcta aaaatttagc
    13861 cccgcaacaa atcacaacct atcctttaat gaaatcaaat cttaccaaag ataatatcgc
    13921 taaaagtcta ggagtgagca ttaaagataa tgaatttact tattatcaaa tcatacgaga
    13981 attttttaaa gactataccc aaaacaatgg ttggagtttt tctttagaaa aaaacaagct
    14041 taatgacgaa tatgtcagtt ctcatcatga atacctagga gtaggcagcg gggcttttag
    14101 ctttttagat ggggagcttt taatcaatgc atttaatcta aatgattatg ctaaatttat
    14161 acaagaaaaa caaaatgcta atatagccaa agcttgtttt gataaaaaag aaattatcaa
    14221 atatgtcttt ttaactgaaa ttttttcagg gaaaatagaa attgataaat ttaataaaac
    14281 tctaaattgc aatctcgaaa aagaactttt catagaactt ttaggactta aaacaagtgg
    14341 tgccatcata aaagatcaaa atgctttaat cgcaactgaa tttggtcaat atctttttgt
    14401 ggttttaatg aaagattttt acacaggaat ggatcttgtg cgcgcagtat ttagagatga
    14461 taagcgtctt aaaaataaag attatatcga tatcatgaaa gaaaatattg atccgcttaa
    14521 ctccgctagt atggaattta aagcggagac aaactaaaag ggacgaacaa ccatcattaa
    14581 agcgatgata ataaacatta tagttggaaa ttcattataa attctaaaat attttccact
    14641 tttagtagaa gtatcatttg ctaaagcttt taaacaataa taattatgta tatgaaaaat
    14701 aatcaaaagt gtaacacagg taagtttaac atgcataaaa cccgcaccta ccattaaaac
    14761 ttccttatga gcatgcaaca ttaaacttcc tgtgattaaa gtcacaatca ttgcaggagt
    14821 ttgtatataa taataaagct ttctttcttg aatttttaca acctcgacaa aacctttatt
    14881 gtctttatgt tcagcatgat acacaaaaag acgaggtaaa taaaaaagac ccgccatcca
    14941 agaaacaaat gccaaataat gcacccattt aatccaaaaa taataatcat taatccattc
    15001 tgtcatcttt tttccttttt ttaaatattt cttgtattaa aatcaaagcc acacttatat
    15061 ttatcatgac atctgcaaca ttaaaaatag caaaattaaa ccatttatgc caaaaaaaca
    15121 tatccactac acctccatgt ataaaacgat ccaataaatt tgaaacgccg gcaccaagca
    15181 tcattccaaa agctatgcta tgagttttta aaagtgttct ttgccaaaaa agataaataa
    15241 aaagcacgcc aattaaagca agatgtaaat attttaaatt atgttctaaa aaactcaaca
    15301 ttgaaaaagc tacgcctgta tttagagcat aagttaaatc taggtattca ctctgccatc
    15361 taaatcctgc taaagttaag gattttaccc attgatcaag ggcaaaaacc aaaacaaagg
    15421 caccccaaaa ataaaaaata aatttaaaag ttttagccat ttaaagcttt cttaaaaaac
    15481 tccacaacat ttttcatttc tttttctaag agcttaatat ctctggcttc tagtaaaagt
    15541 cttatcaaat tttctgttcc agaatagcga aataaggtat taatattttt attttctaaa
    15601 tcttttttta attcttttaa acctttaatt ttatctaaat cttttttttc tgcaatttta
    15661 agattgatta aaagctgagg ataaggttta acttgaccca aaatagaact tgcagatttt
    15721 ttcttagaaa gcattaaagc actaaattgc aaggcagcta tcaaaccatc tccagttttt
    15781 gcataatcgc taaaaataat atgcccactt tgttctccac caaaatttcc accattggct
    15841 tttagttttt caagcacata tttatcgcca acattacaag tatcaagttc tataccatgt
    15901 ttatttaaaa actcttttaa agcaccatta ctcattatag tagccacaac acttgattgt
    15961 aatttacctt gttctttaag ataaagtgcc aatacaccca ataaactatc cccattagcc
    16021 acttcgcctt tttcatctac aaccaccaaa cgatctgcat caccatcaaa agcaaagccc
    16081 acatctgcac gcaaacgctt tacctcagca gctaagttta caggatgcaa agctccacaa
    16141 ttttcattga tattaagtcc attaggttta tcactcatta ctataacttc agcgcctaat
    16201 tccttaaaaa cagtaggtgc taccttataa gctgccccat gagccacatc taaaacaaca
    16261 cgcaaagact ttaaagtaag atcttttgga aaagaatttt taatagaaac aatatatctt
    16321 cctataacat catcaattct ttttgcttga ccaatttttt ccatatctac cttagaggct
    16381 tgtataagct tatcatcaaa ataaatttct tctatttttt tctctatatc ttcactgagt
    16441 ttatttccat gagcatcaaa aaatttaata ccgttatcat aataaggatt gtgagaagct
    16501 gaaatcataa tccctgcgtc acaacgcata tcttcagtta agaatgcaat cgcaggagtt
    16561 ggcataggac caatttgtat aacattatat cctatagaag taagccctga aacaatagca
    16621 ttttctatca tatagccact tcttcttgta tcttttccta ctaagatatt attagtaata
    16681 cttttatctt taaaataaat acccgcagcc attgctaaac gcatagccaa aaaactatct
    16741 aaaaattcac ccgcttttcc acgaactcca tcagttccaa aaagtctcat tgcaaacctt
    16801 tctagcaaaa tttaaagaca attataacaa agctaagata aagaaattta aacaagctct
    16861 aaaaatagag cttgtttgga accttatagt tcaggtttag gagttttttc agtagaaata
    16921 ggaagttgtg gataaacaat tgctggtttt gttcctgtta aggattttaa gaaagtttca
    16981 atactttttg cttctttatc agaaatttta atgccaagtt gcacactacc catttcctta
    17041 atagcatctt ttagattcca aatagcgcca ttatgaaaat atggagcagt ttcagcaaca
    17101 tttcttaaag ttggagtttt taccatgcca tttgcatcac ctttaaaatc acctaaattt
    17161 gcaaatttat atttaccagc aacttcaaac gcttgcatat tgccacctaa attcacacca
    17221 ttatgacaag ctacacaacc cttgtctata aaaagcttta agcctttttg ctcttctttt
    17281 gttaaagctt tttcatcgcc ttctaaaaat ttatcaaaac gagatggagt gatcaaggtt
    17341 ctttcaaaat ttgcaattgc atcagcaata ttgtcaaaat ttacaccact tttaccatag
    17401 atttttttaa actcactcac atattcaggc aatgatgaaa ttttttctac tgcgagttta
    17461 gcaggagttg ccatttcagg atcagcttgg attggacctt tagcttgatc ggctaatgtt
    17521 cctgcacgac catcccaaaa ttgagtatta tttaaaaccg cattataaac tgttggtgaa
    17581 tttaaatgat ggggatttgc tgtccattta tgacctattg cagtactaac cccatctgtt
    17641 ccaccaagtc ctacattgtg acaggtatta caagaaatga taccactttt tgaaaggcgt
    17701 ggttcaaaat aaagcttttt gccaagctct gctttttcaa gagtaaattc actagccttt
    17761 actccatttt gttttaaaat ttcatcaacg cctttttgat cttttggtaa ggtaacaaga
    17821 cctgaatttt tagcttcatc tataagactt gcagcattta agcttgaaaa agcaactaag
    17881 gatgctatta gcaataattt tactttcatt tacaaactcc tattaaagat aaattaaaat
    17941 aaaa
//
LOCUS       DAPIYB010000031        17356 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.031, whole genome shotgun sequence.
ACCESSION   DAPIYB010000031 DAPIYB010000000
VERSION     DAPIYB010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17356)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17356)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17356
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.031"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            101..1165
                     /gene="mqnE"
                     /locus_tag="RJ318_000814"
     CDS             101..1165
                     /gene="mqnE"
                     /locus_tag="RJ318_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HDV7430701.1"
                     /translation="MKNLITKLENEERLNQEEANALWDLDLFTLGKYAHKKRTKLHGK
                     KVYFNINRHINPTNICADTCKFCAFSAHRKNPNPYLMTHEEIMKIVDETVKRETKEVH
                     IVSAHNKDTTWQWYLEIFKMIKEKYPNLHVKAMTAAEIDFLHRRFKMSYEEVIEKMLE
                     YGVDSMPGGGAEIFDEEVRKKICHGKVSSENWLKIHKLWHEKSKQSNATMLFGHIEER
                     HHRIDHMLRLRDLQDQTGGFNAFIPLVWQRDKSFIQTDKIMDSEEILKTIAISRLVLD
                     NIKNIKAYWATMTLNLAMVAQEFGANDLDGTIEKESIQSAGGAKSAKGTSLKTFIDMI
                     KTSNLIPVERDSLYNELKTY"
     gene            1175..2494
                     /locus_tag="RJ318_000815"
     CDS             1175..2494
                     /locus_tag="RJ318_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDV7430702.1"
                     /translation="MSFFKLKENNTSFKTEVIAGLTTFLAMVYIIPVNSSIVGNTGMP
                     IEALITATALITIVASAFNAFFANTPVAMSVGMGLNAYFTFAVCLGQNIAWQSALGAV
                     FISSIIFLILSFTHFRLWVIRNIPKDLRLAICAGIGCFIAFLGLSQMGVIMHNKDTLV
                     SIGNFKSPHVLFGIFTLALIIFFWAIKLRGAFILGVLASSIIAWIFHLDNASFPVQIF
                     SWPNFSMENGLGAIFLQLDIKSALNITMIPIILTFFITQLFDSIGTITGVGERGKIFD
                     DPKNGEKKLSKTLMADATGSALGAMTGTSTVTAFVESTTGVESGGRTGLIALVVAICF
                     AFTLFLLPLFKAIPANAIYPVLVMVGILMFMEVKNIDFKDSAIAVASFFTIIMMPFTY
                     SITTGFAFGFLSYLLVRIFKREWDKINLGIIVLSLLSLGNFLLMALQ"
     gene            2508..2951
                     /locus_tag="RJ318_000816"
     CDS             2508..2951
                     /locus_tag="RJ318_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HDV7430703.1"
                     /translation="MIFYSYEEFKEDVKILAKEIKEDFNPDALLAIARGGMSLGHSLA
                     VALKTRQLFALNSIHYDNTKKLDTIEIFNIPDLSKHKKILLIDDIVDSGESLAEIKKV
                     LLEKFPHIELKITTIFYKKTALLEPDFKVKEATEWVDFYWDINLD"
     gene            2996..3694
                     /locus_tag="RJ318_000817"
     CDS             2996..3694
                     /locus_tag="RJ318_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HDV7430704.1"
                     /translation="MRIKFISFILIFFTIFAFAKEQNLDDFEQEYQNYQVNDPLSGYN
                     KAMTSFNVALYDYGLRPVLKGYNAITPEFIRLGARNFFDNLLAPLRFVSNVLQFKFEE
                     AGEEFKRFTANTIMGFGGLMDVASKMGLKKHPADLGTVLAHWGVGSGFHIVLPILGPS
                     NLRDTLTLPATWYASFTAYIDPTWASIAISAYGFGNELSFRLDEIDEIYHNTPNLYPF
                     LRDAYEQRRNELSK"
     gene            3704..4273
                     /locus_tag="RJ318_000818"
     CDS             3704..4273
                     /locus_tag="RJ318_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HDV7430705.1"
                     /translation="MKKIFLILTLFFNAFALQLDEISSTMQKNIDASLKLLQDNKEDK
                     KQAANGIFKLFDSIIDYKLMAKLSLSKNYSKLTPKEQEKFTTAFETSLKKSFTDKLSL
                     YKDQVLKVKNGELKNEKRYFLTTSMVVDGEEKNIIFKFYNDNNNWLIYDVDVLGVSIV
                     QTYRSQFGDILANQGFDALLQKLESIVIE"
     gene            4273..6744
                     /locus_tag="RJ318_000819"
     CDS             4273..6744
                     /locus_tag="RJ318_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RND family transporter"
                     /protein_id="HDV7430706.1"
                     /translation="MFAKLLKFFISRPKSTFFGTLFICLFLSFFAFKLSVDASAESLL
                     LEDDADLKTFREISKHYKSDNFLLLAFKPYDEKPFSNENLAKLKKLHEELEKAPLVER
                     VFSIINAPLLQSSQNTDLKELLKNIPNIESQDINRTKAQNEILNSPFYKNNIISKDGK
                     VTGLIIYLKPDTVYNNLIEKRDLATDEKEKDQIRLAIKEHQDKQKVITKQSLDTIKSI
                     VRNYEKNKDTLYLGGVSMIADDMIAYIKSDLVLYGVSLVFLLGLALYYFFRSWRFVFL
                     PLFICFISLSAASGVFALLNFQITVISSNYVALVLIITLSVVVHLITHFIESTQNHPK
                     AKVERIVLETLLAKANPSLYAIVTTMIGFFSLILSNIEPIIKLGIMMSIGIGLALIFS
                     YLFLASILVLLKPKNYHKKEFKFNLLAFCAKTALDPKKRRMIYEISVLAIILALIGIS
                     KLRVENSFVNYFKDGSEIKKGLLVIDKNLGGTLPLEVIIRFPNNKNDQNASDTLDSFE
                     SEFENLATQETYWFDSKKTRIAKKVHEFLENKEFVGSVLSLNSLLTLGKNINDGKELD
                     DFALAFLNENLPAKFKQDLLSPFVSIENNELRFSMRIVDSDPNLRRNEFLIDLKKQLN
                     ELVKNDGVEVQITGIMVLYNNMLQSLFSSQFDTLIFVILAIFILFIIVFRDLKFSVAA
                     ILVNVIPLSVVFALMGLLGIPLDMMSITIAAIAIGIGVDDAIHYIYRFREEIKNKSLE
                     EAIMISHLSIGSALYYTTISIVLGFSVMMSSNFIPTIYFGILTVFVMILLLSGSLFLL
                     PSFLITIYSKKTKFPNQHKEHILKQ"
     gene            complement(6775..7377)
                     /gene="rdgB"
                     /locus_tag="RJ318_000820"
     CDS             complement(6775..7377)
                     /gene="rdgB"
                     /locus_tag="RJ318_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HDV7430707.1"
                     /translation="MKIILATSNKHKVLELKEILKDFEIYAFDEVLMPFEIEENGKTF
                     KENALIKARAVFNALDEKQKKDFIALSDDSGICVDVLEGNPGIYSARFSGKGDDKSNR
                     DKLVNEMIKKGFKQSKAYYVAAIAMVGLMGEFSTHGTMHGKVIDTEKGENGFGYDSLF
                     IPKGFDKTLAQLSVDEKNNISHRFKALELAKIILKILNKG"
     gene            7544..8839
                     /locus_tag="RJ318_000821"
     CDS             7544..8839
                     /locus_tag="RJ318_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7430708.1"
                     /translation="MLNNVLPLSFIVGTRFFGLFIVLPVLSLYALKLEGANEFLVGLL
                     VGVYALTQMILQMPFGILSDKIGRKKTMLIGLIIFIIGSLICSFAENIYTMLLGRMLQ
                     GAGAIGAVATAMISDFITEENRGKAMAVMGSFIGLSFAASMVISPLMSAKWGLSSLFD
                     LSAALSLLCIILLYTVVPKENKITHENEKTPFFHLIKQKNLALMNLTNFMQKMLMSIA
                     FLSIPIILVKHLGFASDKLWIVYSASMVAGFIAMGFAGSLGEKKGLAKQILLLGIVFF
                     ILSYLFFAFSNSIDFFIIAVVIFFIGFNLHEPIMQNCASKFCKVHEKGAALGLFNAFG
                     YGGSFIGGIIGGIFLHLDTLNLLAIILVILALIWLVALFFLKNPADFKNLYLPLETPL
                     NFSTFGENLGVVDIYKNSKNLVVKFDSKLTSKEELEGKL"
     gene            8836..9645
                     /locus_tag="RJ318_000822"
     CDS             8836..9645
                     /locus_tag="RJ318_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDV7430709.1"
                     /translation="MKKILFLFCSFFLAFAKPSLEIPKLSKQAKQNFILENVKFNYNG
                     TIYKIFIAKNKNENSNYKYKIIYLLDGNAFFPLFLNLFNTPVKENLLIIGIGYDNNLA
                     FDTQKRTKDYTPTTNLNKQGGGSKEFRNFLITQLIPYINKMYPIDFSHQILFGHSFGG
                     LFAIDTLLYDSKIFSHYFIISPSLWWDNSEFLPNIIKLQTCPKIYIGLGSLETNSSII
                     KGVAKLNAQKLSEKISKETNCKTHFKLFKNETHGSVISKAMLWMKKLLDLN"
     gene            complement(9638..11299)
                     /locus_tag="RJ318_000823"
     CDS             complement(9638..11299)
                     /locus_tag="RJ318_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDV7430710.1"
                     /translation="MQDFVYIKNDVLIPLPDAIEILDQANDKEALICNDKNQKAQIYA
                     PEINFYLKNSQDEILEQSKNVLTLYEARASVYDLGLDLEQSKEVQNRLIVADGDAQTV
                     EFLKEHEFKVIALSSAEILAVFGSVGELCAVVKNQGEEVEIDFDFLLFKAEDLSVVRK
                     DFTRQSGCYNLLNFENLEVLFEFLQSKSPKYHYKTYISYNASVCQYHERRSEHCAKCA
                     EICPTVAILKDDENKHLEFSQVDCLGCGGCISVCPSGSLDYAPMPRESFFTLCEFYKD
                     KKILIIPKKMSLENLNLALPKDVLPFMIEGEKWLSSMHFLTLLQNSGANLVFYTDFVS
                     RGSNEAIMLLNTFFERKFQKKAIFVAKDEKELQNVLKEQEFIQDLKYDFHNNTLTTRE
                     NFAKRMQEMIKNEDFGSIESGEWLRYGKVEINPNTCTLCLSCVGACNVGALIADKQEN
                     ALKFNASLCTTCGYCELSCAEKDTLKLFRSGMEFRASYFEYQTMAKDELFSCIECGKE
                     FATKKAVEKIANLMKPKFGNDENKIKTLYCCADCKAKVMIKAMIN"
     gene            11377..12699
                     /locus_tag="RJ318_000824"
     CDS             11377..12699
                     /locus_tag="RJ318_000824"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDV7430711.1"
                     /translation="MNKFRTFPQINTLIEDESLKSYPFYIKAFFCKKVVAKLKENFFQ
                     DEISKDKLLLEIKKEIKTFYRKDLQSVINASGVVIHTNLGRSVIHEELYEACKDIICN
                     YSNVEFDLENGKRGSRYALVLEKLKMLFECEDALVVNNNAAAVFLVLNSLCYDKEVIS
                     SRGELVEIGGSFRVPEVIKAAGVKLCEVGTSNKTHLKDYEQAINENTALILKTHKSNF
                     ALMGFHSEVNIKDLHELAKEKELLSYYDLGSGWCENLNEKLIKNEPKIRKLVQECDIL
                     SFSGDKLFGSVQAGIILGKKELIEKLKQNQLLRMLRVDKLTLSFLNESLKAYLQKDYE
                     KIITLKLLNDDLSFIEKKALRVQKELKFQTQLKKSKSLVGGGSMPDKSLDTYILTFQG
                     DALKLQTRFRKENIIGRIENDEFVLDFRTIRENELQKLILTINQMENL"
     gene            12696..14501
                     /gene="selB"
                     /locus_tag="RJ318_000825"
     CDS             12696..14501
                     /gene="selB"
                     /locus_tag="RJ318_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDV7430712.1"
                     /translation="MKSVIIGTAGHIDHGKTSLIKALNGFEGDSLKEEQERQITINLS
                     FSNLKLKDKNISFIDVPGHKDLVKTMVSGAFGFSVCLFVVDINEGLKEQSLEHLEILK
                     ILDIKNIILVLSKCDLCENIEQKSVEILEELKNLDYPILKVFHTSIKNNQGIEELKNY
                     LYTIENKENDEELIFHYYIDRVFSLKGIGTVVTGSLNEGSITLNEKIICLDTQKELIV
                     KNIQNHDTNLEQIKACNRVALSLNCDYKELKKGYLLSKKGYFKAFKECDALVKAKNLQ
                     NSKMIFCVGSRQIECKINILKKLENDEFFVHFSFDKNVFLSFDEAFILLQNNRVIGGG
                     KVLNPLSEPLKKEQKNKFLMFLKNKDFKAAFSFLKDAHKYGFGLLSSYQRFKLSHQKA
                     LKLAKELNQVFVDEKNLNVYHLQSLEEIKNFIKFILEKNPYAMLSAHSLALRITWASE
                     NFCELGLKEMSNLLDFQNGIYFKKGIDFEKLQEKNNNQMYEILKKQGIKPEAPYNLYD
                     FLELDRKSGDNILKKLTQKGLVVRLSHNLFIEKQALEKLMQECLNLLKNQSLDVQSMK
                     EYFNLSRKYAIAYLEYLDKFPQVSKEAEKRFLTNI"
     gene            14550..15260
                     /locus_tag="RJ318_000826"
     CDS             14550..15260
                     /locus_tag="RJ318_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDV7430713.1"
                     /translation="MKKLSLILVCSASLFAASNSEISDFYSKSIKAQFPNATVSVSNR
                     QKVGNTGFESVIVSVELNGQKQENILFTKDSLITPDLIDLKTGISYAQEYEMKKFQEA
                     RENFTKNAKAVAQKETMVIALGDKNKPAIYVFSDPECPYCREHLAQIDDELKNYQVNY
                     ILTPVHGKSAFEKSALIYKEAKKAKNDKEKIAILNKYYDANIKNYPKVSDAELKEVFS
                     LYEKYRSLGLSATPTIIK"
     gene            15266..15796
                     /locus_tag="RJ318_000827"
     CDS             15266..15796
                     /locus_tag="RJ318_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7430714.1"
                     /translation="MSKFALILSFFIALFMSACTNATFTQSFIQTSNEGIFIRSQKQQ
                     SFKISFQNPSQLQTTLDRDLALKLKNLGLKEVKENADYEILINLVDMKKHSYAQKITT
                     SARFFYDFDPLESDGEWMVENYYTMQVNLQINSKNHNSQKTSLLARTAYLGNKERCQL
                     SLENKIINQIVSFFYF"
     gene            complement(15841..16332)
                     /gene="fldA"
                     /locus_tag="RJ318_000828"
     CDS             complement(15841..16332)
                     /gene="fldA"
                     /locus_tag="RJ318_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HDV7430715.1"
                     /translation="MSVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSY
                     DKLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAQ
                     NLKDAGANLVGEVSTDGYTFEASDAVVDGKFVGLALDNDNQEDQTESRIDAWVEQIKP
                     YFA"
     gene            complement(16332..17027)
                     /locus_tag="RJ318_000829"
     CDS             complement(16332..17027)
                     /locus_tag="RJ318_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430716.1"
                     /translation="MLFGFDDKQEFIPQIYRYLNNQELMLTFLTQYNASVDSALKIPL
                     LYAKNTKSLKMIFGNFLHNIMHVSFGKIQNINIKLNTYAFYFQKRKSLIFNTKISKNV
                     DLLRLLRIYLYGICFDAQILFSSYVYDKVSFQNNGKNIDQDGDLIIIDKKFAILPLCK
                     EINTHNLEIENEIYELLNLIKENNFEKFYIVCPRNKNFTHFIEIKHFLCDLNKTMLKL
                     VPYKISNQIIRRK"
     gene            complement(17030..17344)
                     /locus_tag="RJ318_000830"
     CDS             complement(17030..17344)
                     /locus_tag="RJ318_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2325 domain-containing protein"
                     /protein_id="HDV7430717.1"
                     /translation="MSVLVIGADEITPIRAVLHDLGAKKIEHWDARNENRVNRKPIPC
                     DTECIVMLTSFLNHNTMKKIKNEAKKRKIPLVCAKRSVSCVYCEYCKIFNLNKEFSCY
                     KG"
BASE COUNT         6219 a         2610 c         2524 g         6003 t
ORIGIN      
        1 taacaaaaat atcttttatt ttggcttttt ctataaactc tttttcagta agcaaaaatt
       61 ataatgcttt atttaaaaac agcaaaagag taaaattaaa atgaaaaatt taatcaccaa
      121 actagaaaat gaagaaagat taaaccaaga agaagccaat gcactttggg atctagatct
      181 ttttacctta ggcaaatacg ctcacaaaaa acgcactaaa cttcatggaa aaaaagtcta
      241 ttttaatatc aatcgccata tcaacccaac taatatctgt gcagatacct gtaaattttg
      301 cgccttttca gcgcaccgaa aaaatcctaa tccttatttg atgactcatg aagaaatcat
      361 gaaaatcgtc gatgaaaccg taaaacgaga aaccaaagaa gtgcatatcg tttcagctca
      421 caacaaagat acaacttggc aatggtattt agaaattttt aaaatgataa aagaaaaata
      481 tcctaatctt catgtaaaag ctatgactgc tgctgaaatt gattttttac atcgtcgttt
      541 taaaatgagt tatgaagaag tgatagaaaa aatgcttgaa tacggcgttg attccatgcc
      601 aggtggtgga gctgaaattt ttgatgaaga agtgcgtaag aaaatttgtc atggaaaagt
      661 tagcagtgaa aattggctta aaattcataa actttggcat gaaaaaagca agcaaagtaa
      721 tgctaccatg ctttttggac atatagaaga aagacatcac aggatcgatc atatgttaag
      781 actgcgtgat cttcaagatc aaaccggtgg attcaatgct tttatccctt tagtttggca
      841 aagggataaa agctttatac aaactgataa aatcatggat agtgaagaaa ttttaaaaac
      901 cattgccatt tctcgtttag tgcttgataa tatcaaaaat atcaaagctt actgggcaac
      961 aatgacttta aatttagcca tggtagcaca agaatttgga gctaatgatt tagacggcac
     1021 tatagaaaaa gaaagtatac aaagtgcagg tggtgcaaag tccgccaaag gcacaagttt
     1081 aaaaactttt atcgatatga taaaaacttc aaatcttatt cctgtagaac gcgatagttt
     1141 atacaacgag ctaaaaacct actaaggaga aaaaatgagc ttttttaaac tcaaagaaaa
     1201 caatacgagt tttaaaaccg aagttatagc aggacttact acttttttag ctatggttta
     1261 cattatcccc gtaaattcta gcatagtagg aaatacagga atgcctatag aagctttaat
     1321 caccgcaaca gctttaatta ccatagttgc aagtgctttt aatgcttttt ttgccaatac
     1381 tcctgtagct atgagtgtag gaatgggttt aaatgcttat tttacctttg cggtttgttt
     1441 aggtcaaaac atagcttggc aaagcgcctt aggagctgtt tttatttcaa gtattatttt
     1501 tctcatactt tcttttacgc attttcgcct ttgggtaatc cgcaatatcc caaaagattt
     1561 acgccttgca atttgtgcgg gcataggttg ttttattgca tttttaggct taagtcaaat
     1621 gggtgtgata atgcataata aagatacctt agtcagcata ggaaatttca aaagccctca
     1681 tgtgcttttt ggaattttca ctctagcttt aatcatcttt ttttgggcta taaaacttcg
     1741 cggagctttt attttggggg tattagcaag ctctattatt gcttggattt tccatttaga
     1801 caatgcaagt tttcctgtgc aaatcttttc ttggccaaat tttagcatgg aaaatggttt
     1861 aggagccatc tttttacaac ttgatatcaa aagcgcctta aatattacta tgatacctat
     1921 aattcttact ttttttatca ctcaactttt tgatagcata ggaactatca caggtgtggg
     1981 tgaaagagga aagatttttg atgatcccaa aaatggagaa aaaaaactaa gcaaaacctt
     2041 aatggcagat gcaacaggat cagccttagg agctatgaca ggcacttcta cagttacagc
     2101 ctttgttgaa agcactacag gggttgaaag cggaggaaga actgggctta tagctttagt
     2161 tgtagctatt tgttttgctt ttacactttt tttactgcca ctttttaaag ccattcctgc
     2221 aaacgcaata taccccgtac ttgtaatggt tggaatttta atgtttatgg aagttaaaaa
     2281 tatagatttt aaagatagtg ctatagctgt agcaagcttt tttactatta tcatgatgcc
     2341 ttttacttac tccatcacca caggttttgc ttttggtttt ctttcttatt tacttgtaag
     2401 aatttttaaa cgcgaatggg ataaaatcaa tcttggcatt atagttttaa gtttattatc
     2461 tttgggtaat tttttactta tggcactaca ataaataagg atatataatg atattttact
     2521 cctatgaaga atttaaagaa gatgtaaaaa ttcttgctaa agaaattaaa gaagatttta
     2581 accctgatgc acttttagct atagcaagag gggggatgag tttaggacac tctttagcag
     2641 tggctttaaa aacgcgtcaa ctttttgctt taaactcaat tcattacgat aatacgaaaa
     2701 aacttgatac tattgaaatt tttaacattc ccgatttaag caagcacaaa aaaattctac
     2761 tcattgatga tatagtagat agtggagaaa gtttagcaga aataaaaaaa gttttgcttg
     2821 aaaaatttcc tcatatagaa cttaaaatta caaccatttt ttacaaaaaa accgctcttt
     2881 tagaacctga ttttaaagta aaagaagcta ctgaatgggt ggatttttac tgggatataa
     2941 atcttgatta aaaatttgct ataattttac ttttaaaatt tttaggagtt tttgcttgag
     3001 aataaaattt atatctttta ttttaatttt ttttactatt tttgcttttg ctaaagaaca
     3061 aaatttagat gattttgaac aagaatacca aaactatcaa gtaaacgatc cactttcagg
     3121 atataacaaa gctatgacaa gctttaatgt ggctttgtat gattatggtt tgcgtcccgt
     3181 tcttaagggc tataacgcta tcactcctga atttataaga ttaggggcaa gaaatttctt
     3241 tgataattta cttgctcctt tgcgttttgt aagcaatgtt ttgcagttta aatttgaaga
     3301 agctggagaa gaatttaaaa gatttaccgc caataccatc atgggttttg gtggacttat
     3361 ggatgtggca tcaaaaatgg gtcttaaaaa acatcccgcg gacttaggaa ccgttttggc
     3421 tcactggggt gtaggaagcg gttttcatat tgtcttacct atacttggtc ctagcaatct
     3481 tagagacact cttactttac ctgcaacttg gtatgcaagt tttaccgctt acattgatcc
     3541 tacttgggca agtatagcta taagtgctta tggatttggt aatgaactta gttttaggct
     3601 tgatgaaatt gatgaaattt atcacaacac gcctaattta tatccattct tgcgtgatgc
     3661 ttacgagcaa agacgcaatg aacttagcaa ataaaggaaa ttaatgaaaa aaatattttt
     3721 aatcttgact ttatttttta atgcttttgc cttacaacta gatgaaattt ctagcactat
     3781 gcaaaaaaac attgatgcaa gcttaaaact tttacaagat aacaaagaag acaaaaaaca
     3841 agctgctaat ggaattttta aactttttga tagcataata gattataaac tcatggcgaa
     3901 actcagtctt tcgaaaaatt attctaaatt aaccccaaaa gaacaagaaa aatttaccac
     3961 agcctttgaa acaagtctta aaaaaagttt taccgataaa ctcagtcttt ataaagatca
     4021 ggttttaaag gtcaaaaatg gtgagttaaa aaatgaaaaa cgctattttt taaccacttc
     4081 tatggtagta gatggggaag aaaaaaatat cattttcaaa ttttacaatg ataataacaa
     4141 ctggcttatt tatgatgtag atgttttagg tgtgagtata gtacaaactt atagatcaca
     4201 atttggagat attttagcca accaaggctt tgatgcccta cttcaaaaac ttgaaagtat
     4261 tgtcatagaa taatgtttgc aaagctttta aagtttttta tttctcgtcc aaaaagtact
     4321 ttttttggaa cgttgtttat atgcctgttt ttaagctttt ttgcttttaa gcttagcgta
     4381 gatgcaagtg ctgaaagttt acttttagaa gatgatgcag atttaaaaac ttttagagaa
     4441 atttcaaaac attataaaag tgataatttt ttacttttag ccttcaaacc ctatgatgaa
     4501 aaaccttttt caaatgaaaa tttagccaaa ttaaaaaaac ttcatgaaga attagaaaaa
     4561 gcccctttag tagaacgcgt ttttagtatc atcaatgccc ctttgcttca aagttcgcaa
     4621 aatacggatt taaaagaact tttaaaaaat atcccaaata tagaaagcca agatataaac
     4681 cgcacaaaag cccaaaatga aattttaaat agtccctttt ataaaaataa tatcatctca
     4741 aaagatggaa aagtaacagg gcttattatt tacttaaagc ctgatacagt ttataataat
     4801 cttatagaaa aacgcgatct tgctaccgat gaaaaagaaa aagatcaaat tcgtcttgcc
     4861 ataaaagaac atcaagacaa gcaaaaagtt atcacgaaac aaagtctaga tactattaaa
     4921 agcatagttc gaaattatga aaaaaataaa gatacgctct accttggtgg cgtaagcatg
     4981 atcgctgatg atatgatagc ttatataaaa tctgatcttg tgctttatgg tgtttctctt
     5041 gtatttttac taggacttgc actttattat tttttccgct catggcgctt tgttttttta
     5101 cctcttttta tttgttttat aagcttaagt gcggctagtg gagtttttgc gcttttaaat
     5161 tttcaaatca cggttatttc atcaaattac gttgctttgg ttttaattat caccttaagt
     5221 gtagttgttc atttgatcac gcattttatc gaaagcaccc aaaatcatcc caaagctaaa
     5281 gttgagcgca tagtgcttga aaccttacta gcgaaagcaa atcctagcct ttatgccatt
     5341 gttacaacga tgataggatt tttttcttta atcctatcaa atatcgaacc tatcataaaa
     5401 cttggcatta tgatgagtat aggtataggt ttagctctta tctttagtta tttgttttta
     5461 gcaagtatct tagttctttt aaaaccaaaa aattatcata aaaaagagtt taaatttaat
     5521 cttttagcct tttgcgccaa aaccgctctt gatcctaaaa agcgtcgcat gatttatgaa
     5581 atttcagttc ttgctataat cttagcttta ataggcattt caaaactcag agttgaaaat
     5641 tcttttgtca attatttcaa agatggtagt gaaatcaaaa aaggactttt ggttattgat
     5701 aaaaatctag gtggaacctt acctttagaa gtgatcattc gttttccaaa taataaaaac
     5761 gatcaaaatg caagcgatac tcttgatagt tttgaaagtg aatttgaaaa tttagccaca
     5821 caagaaactt attggtttga ctctaaaaaa acacgcattg caaaaaaagt tcatgaattt
     5881 ttagaaaaca aagaatttgt aggttcggtt ttaagtctta atagtctttt aaccctaggg
     5941 aaaaatatta acgatggaaa agagttggat gattttgccc ttgcgttttt aaatgaaaat
     6001 ttgcctgcca aatttaaaca agacttgctt tcaccttttg taagtataga aaataacgag
     6061 ttaagattta gcatgcgtat tgttgattct gatccgaatt taagacgtaa tgagttttta
     6121 atagatctta aaaaacagct caacgagctt gtaaaaaatg atggagtaga agttcaaatc
     6181 acaggcataa tggtgcttta taataatatg ctccaaagtc ttttttcatc gcaatttgat
     6241 actcttatat ttgtaatttt agctattttt atacttttta tcattgtttt tagagattta
     6301 aaattttcag ttgcggctat attggtaaat gttattcctt taagtgtggt ttttgctctt
     6361 atggggcttt taggtattcc tttggatatg atgagtatta ctatagctgc tattgctata
     6421 ggcataggcg ttgatgatgc tatacattat atttatcgtt ttagagaaga aattaaaaac
     6481 aaaagcctag aagaagccat tatgatttct caccttagta taggttcggc actttattat
     6541 actaccatta gcatagtttt aggttttagt gttatgatga gtagtaattt cattccaaca
     6601 atttattttg gaattttaac cgtttttgta atgattttgc ttttaagtgg aagtttgttc
     6661 ttattaccaa gctttttaat cactatttat tctaagaaaa ccaagtttcc aaaccaacat
     6721 aaagagcata tattaaaaca ataatagcta tatattttaa aaaatttttc atttttatcc
     6781 tttatttaaa atctttaaaa tgatttttgc aagctctaaa gctttaaaac gatgagagat
     6841 attattcttc tcatccacgc taagctgggc taaggtttta tcaaaaccct ttggaataaa
     6901 aaggctatca taaccaaaac cattttcacc tttttctgta tctattactt ttccatgcat
     6961 ggttccatgc gtactaaatt cccccatcaa acctaccata gcaatagcag caacataata
     7021 tgccttactt tgtttaaaac ctttttttat catttcattg acaagtttat cacggttact
     7081 tttatcatcg cccttaccgc taaatcgagc agaataaatt cctggatttc cttctaaaac
     7141 atctacacaa atgccactat catcacttaa agcgataaaa tctttttttt gcttttcatc
     7201 caaagcatta aaaaccgctc ttgctttaat caaggcgttt tctttaaaag tttttccatt
     7261 ttcttcaatc tcaaaaggca ttaaaacttc atcaaaagca taaatttcaa aatcttttaa
     7321 aatttcttta agttctaaaa ctttatgttt attgctcgta gctaggataa tcttcataac
     7381 aaaagctcca aaataatatc aaaaacaaaa atatgatttt ataaaattta tccttgtgcg
     7441 tagcttttaa atacaaaatg gtaaaacgat gttaatcaat gcttaatcca tttcatagta
     7501 aaattatcct aatttaaatt tcaaatttaa taggaaattg ataatgctaa ataatgtctt
     7561 acccttatct ttcatagttg gaacaagatt ttttgggctt tttatagttt tgccagtttt
     7621 aagcctttat gctttaaaac ttgaaggtgc taatgaattt ttagtgggac ttttagttgg
     7681 tgtttacgcc ttaacccaaa tgattttaca aatgcctttt gggattttaa gtgataaaat
     7741 tggtcgtaaa aaaaccatgc tcattggact gattattttt ataataggct ctttaatctg
     7801 ctcttttgca gaaaatattt acaccatgct tttagggaga atgctccaag gtgcaggagc
     7861 tattggagca gtagctacgg caatgataag tgattttatc acagaagaaa atcgtggtaa
     7921 agccatggcg gtaatgggtt cttttatagg acttagtttt gcagcttcta tggtaatttc
     7981 tcctttaatg agtgcaaaat ggggtttatc tagccttttt gatcttagtg cggctttgtc
     8041 tcttttatgt ataattttac tttataccgt tgtacctaaa gaaaataaaa tcactcatga
     8101 aaatgaaaaa actccttttt ttcatcttat taaacaaaaa aatttagccc ttatgaatct
     8161 tactaatttc atgcaaaaaa tgcttatgag tatagcattt ttaagtattc ctattattct
     8221 agtaaaacat ttaggctttg cttctgataa actttggatt gtttatagcg cttctatggt
     8281 agcaggtttt atcgctatgg gctttgctgg aagtttaggc gaaaaaaaag gtttagctaa
     8341 acaaatttta ctcttaggaa ttgttttttt catactttct tatctttttt ttgcttttag
     8401 taattctatt gattttttta tcatagcagt tgtgattttt tttataggtt ttaatttaca
     8461 cgaacctatt atgcaaaatt gtgcatcaaa attttgtaaa gttcatgaaa aaggtgcagc
     8521 attagggtta tttaatgctt ttggatatgg tggaagtttt ataggtggta ttatcggagg
     8581 gatattttta catctagata ccttaaatct tttagctatt attttagtaa ttttagctct
     8641 aatttggctt gtggcattat ttttcttaaa aaatccagct gattttaaaa acctttatct
     8701 acctttagaa acgcctttaa atttcagtac ttttggtgaa aatttagggg ttgtagatat
     8761 ttataaaaac tctaaaaatc ttgttgttaa atttgatagc aaacttacaa gtaaagaaga
     8821 attagaaggc aaattatgaa aaaaatatta tttttattct gttctttttt tctagctttt
     8881 gcaaaaccaa gtctagagat acccaagctc tcaaaacaag caaaacaaaa ctttatttta
     8941 gaaaatgtca aatttaatta taatggcaca atatataaaa tttttatagc taaaaacaag
     9001 aatgaaaact caaattataa atataaaatc atttatttac tcgatggaaa tgcctttttt
     9061 cctctttttt taaatctttt caacactcct gtcaaagaaa atcttttaat tattggaata
     9121 ggttatgata ataatttagc ttttgataca caaaaacgca ctaaagatta tacgcctaca
     9181 acaaatttaa ataaacaagg tggaggtagt aaagaattta gaaatttctt aataacccaa
     9241 ctcatccctt atatcaacaa aatgtatcct attgatttta gccatcaaat tctctttgga
     9301 cattcttttg gaggactttt tgccattgat acacttcttt atgatagtaa gatttttagt
     9361 cattatttta ttatttcacc ttctttatgg tgggataata gtgagttttt acctaatatc
     9421 ataaaattac aaacttgccc taaaatttac atcggattag gttcattgga aacaaattca
     9481 agtattatca aaggtgtagc taagctcaat gctcaaaaac ttagcgaaaa aatatccaaa
     9541 gaaactaatt gtaaaactca ttttaaactt tttaaaaatg aaactcatgg aagtgtcata
     9601 tctaaagcta tgctgtggat gaaaaagctt cttgatctta attaatcatt gcttttatca
     9661 tcacttttgc cttgcaatct gcacagcaat aaagtgtttt gattttattc tcatcattac
     9721 caaatttagg cttcattaaa ttggctattt tttctacagc ttttttggtc gcaaattctt
     9781 taccgcattc tatacaggaa aaaagctcat cttttgccat ggtttgatat tcaaaataag
     9841 aagctctaaa ctccattcca ctacgaaata attttaaagt atctttttca gcacaactta
     9901 actcacaata cccacaagtc gtacaaagag aagcattgaa tttcaaagca ttttcttgtt
     9961 tatcagcgat taaagctcct acattacagg cacccacaca agaaagacaa agcgtacagg
    10021 tattaggatt gatttctacc ttaccataac gcaaccattc gccactttct atactaccaa
    10081 aatcttcatt ttttatcatt tcttgcattc ttttggcaaa attttctctt gtagttaagg
    10141 tgttattatg aaaatcatat tttaaatctt gtatgaattc ttgctctttt aaaacatttt
    10201 gcaattcttt ttcatcttta gcaacaaaaa tagctttttt ttgaaatttt ctctcaaaaa
    10261 aagtatttaa aagcataatg gcttcattgc taccacgaga tacaaagtcc gtataaaaaa
    10321 ccaaatttgc accactattt tgcaaaagtg ttaaaaaatg catagaagaa agccattttt
    10381 caccctctat cataaagggt aaaacatctt ttggtaaagc aagatttaaa ttttctaaag
    10441 acattttttt aggaatgatt aaaatttttt tatctttata aaactcacaa agggtaaaaa
    10501 aactttctct tggcatagga gcataatcaa gcgatccgct aggacacacg ctaatacatc
    10561 ctccacaacc caaacaatcc acttgagaaa attccaaatg tttgttttca tcatctttta
    10621 aaatcgccac agtaggacaa atttcagcac attttgcaca atgctcactg cgtctttcgt
    10681 ggtattgaca cacactagca ttatagctaa tataagtttt ataatgatat tttggacttt
    10741 tgctttgcaa aaactcaaac aatacttcaa gattttcaaa atttaaaaga ttataacatc
    10801 cactttgtct tgtaaaatct ttacgcacaa cgcttaaatc ctcagcttta aaaagtaaaa
    10861 aatcaaaatc tatttccact tcttcgcctt gatttttaac cacagcacaa agctccccta
    10921 cacttccaaa aacagctaaa atttctgcac tgcttaaagc aataacctta aattcatgtt
    10981 cttttaaaaa ctctacagtt tgagcgtcac catctgcgac aatcaaacga ttttgcactt
    11041 ctttgctttg ttctaaatca agccccaaat cataaacgct agctcttgct tcataaagcg
    11101 ttaaaacatt tttactttgc tctaaaattt catcttgaga atttttaaga taaaaattaa
    11161 tctcaggggc ataaatttgt gctttttgat ttttatcatt gcaaattaat gcttctttat
    11221 catttgcctg atctaaaatt tcaatagcat caggcaaagg gattaaaaca tcatttttta
    11281 tataaacaaa atcttgcatt gtcttcctta atctctttaa aacatcattt tataaattct
    11341 atgttaaaat aaccaaatat tttcttaagg cttaagatga acaaatttag aacttttcca
    11401 caaattaaca ctcttattga agatgagagt ttaaaatcct atccttttta tatcaaagca
    11461 tttttttgta aaaaagttgt cgcaaaacta aaagaaaatt ttttccaaga tgaaatttct
    11521 aaagataaac tacttttaga aatcaaaaaa gaaatcaaaa ctttttaccg caaagattta
    11581 caaagtgtga ttaatgcaag cggagtggtt atacacacaa accttggtag aagtgtaatc
    11641 catgaagaac tttatgaagc gtgtaaagat atcatttgta attattctaa tgtagagttt
    11701 gatttagaaa atggaaaaag aggctctcgc tatgctttgg tactagaaaa acttaaaatg
    11761 ctttttgaat gtgaagatgc tttagtggtc aataacaacg ctgcggcagt ttttttagtg
    11821 cttaattctc tttgttatga taaagaagtc ataagctcaa gaggagaact tgtagaaatt
    11881 ggcggaagtt ttcgtgtgcc tgaagtgata aaagctgcag gtgtaaagct ttgcgaagtt
    11941 ggaactagta ataaaacaca cttaaaagac tatgaacaag ctatcaatga aaataccgct
    12001 ctaattttaa aaacccacaa gtctaatttc gctcttatgg gttttcacag tgaagtaaat
    12061 ataaaagatc tacatgaact agcaaaagaa aaagagcttt tgagttatta tgatctaggt
    12121 tctggctggt gtgaaaattt aaatgaaaag ctgattaaga atgaacctaa aatcagaaaa
    12181 ctcgtgcaag aatgtgatat tttaagtttt agcggagata aactttttgg cagcgtacaa
    12241 gcgggcatta tacttggaaa aaaagaactc atagaaaaac ttaaacaaaa tcaactttta
    12301 agaatgctaa gagtggataa attaacccta tcttttttaa acgaaagctt aaaagcttat
    12361 ttacaaaaag attatgaaaa aattattacc ttaaaacttt taaatgatga cttatccttt
    12421 atagagaaaa aagctttaag agtgcaaaaa gaattaaaat ttcaaaccca gcttaaaaaa
    12481 agcaaaagtt tagtaggagg aggttctatg cctgataaaa gtttagatac ttatatacta
    12541 acttttcaag gagatgcttt aaaactacaa actcgattta gaaaagaaaa tatcatagga
    12601 cgcattgaaa atgatgaatt tgttcttgat tttagaacta tacgagaaaa tgaacttcaa
    12661 aaacttattc ttacaatcaa tcaaatggaa aacttatgaa atctgttatt ataggaaccg
    12721 caggacatat tgatcatgga aaaacttcac tcattaaagc tttaaatggt tttgaaggcg
    12781 atagtttaaa agaagaacaa gaaagacaaa tcaccattaa tttaagtttt tcaaatctta
    12841 aattaaaaga taaaaacatt tcttttatcg atgttccagg acataaagat ttggttaaaa
    12901 ctatggtaag tggagctttt ggctttagtg tttgtttatt tgtcgtagat attaacgaag
    12961 gtttaaaaga acaaagttta gaacatttag aaattttaaa aattcttgat attaaaaata
    13021 tcattttagt gcttagcaaa tgtgatcttt gtgaaaatat agagcaaaaa agtgtagaaa
    13081 ttttagaaga gttaaaaaat ttagattatc ccattttaaa agtatttcac accagtataa
    13141 aaaataatca aggcatagaa gaattaaaaa attatcttta taccatagaa aacaaagaaa
    13201 acgatgaaga actgattttt cattattata tcgatagagt tttttctcta aaaggcatag
    13261 gaactgtcgt tacaggcagt cttaatgaag gaagcatcac tttaaatgaa aaaatcatct
    13321 gtttagacac tcaaaaagaa ctcattgtta aaaatataca aaaccacgat actaatttag
    13381 agcaaatcaa agcttgtaac cgtgtggctt taagtttaaa ttgtgattat aaagagttga
    13441 aaaaaggtta tttgctaagt aaaaaaggtt attttaaagc ctttaaagaa tgtgatgctt
    13501 tagttaaagc aaaaaattta caaaatagca aaatgatttt ttgtgtaggt tcaagacaaa
    13561 tagaatgcaa aataaatata ttaaaaaaac tagaaaatga tgaatttttt gtgcatttta
    13621 gttttgataa aaatgtattt ttgagttttg atgaggcttt tattttatta caaaataatc
    13681 gtgttatagg cggtggtaag gttttaaatc ctttaagcga acctttaaaa aaagaacaaa
    13741 aaaataaatt tttaatgttt ttgaaaaata aagattttaa agcagctttt tctttcttaa
    13801 aagacgcaca taaatacggc tttggtttgc tttcaagcta tcagagattt aaactctctc
    13861 atcaaaaagc attgaaatta gcaaaagaat taaatcaagt atttgttgat gaaaaaaatc
    13921 ttaatgtata tcatttacaa agcctagaag aaattaaaaa tttcatcaaa ttcatacttg
    13981 aaaaaaatcc ttatgccatg ctttcagcac attctttagc tttaaggatt acttgggcaa
    14041 gtgaaaattt ttgcgaactt gggcttaaag aaatgtcaaa tttattggat tttcaaaatg
    14101 gaatttattt taaaaaaggt atagattttg aaaaacttca agaaaaaaac aataaccaaa
    14161 tgtatgaaat tttaaaaaaa caaggtatta aacccgaagc tccttataat ctttatgatt
    14221 ttttagaact tgatagaaaa agcggagata atatactcaa aaaacttacc caaaaaggct
    14281 tggttgtaag actttcacac aatcttttta tagaaaaaca agctcttgaa aaacttatgc
    14341 aagaatgttt aaatttatta aaaaatcaaa gtcttgatgt gcaaagtatg aaagaatatt
    14401 ttaatctttc aagaaaatat gctattgctt atttagaata cttagacaaa tttcctcaag
    14461 taagtaaaga agctgaaaaa agatttttaa caaacattta gaaaatcatt atagaattaa
    14521 acataattta tttaaaggat ttataaacta tgaaaaaatt aagtttaatt cttgtctgtt
    14581 cagcatcttt gtttgctgca agtaattcag aaattagtga tttttattca aaaagcatta
    14641 aagcacaatt tccaaatgct accgttagtg tatcaaatcg tcaaaaggtt ggtaatacgg
    14701 gttttgaaag tgttattgta agcgttgaat taaatggaca aaaacaagaa aacattcttt
    14761 ttacaaaaga tagtcttatt acccctgatc ttatcgactt gaaaacggga atttcttatg
    14821 ctcaagaata tgaaatgaaa aaatttcaag aagcaagaga aaattttaca aaaaatgcta
    14881 aagctgtagc acaaaaagaa accatggtaa tagctttggg agataaaaat aaacctgcaa
    14941 tttatgtttt ttcagatcct gaatgccctt attgtagaga acatttagct caaattgatg
    15001 atgaacttaa aaactatcaa gttaattata ttttaactcc agtacatgga aaatctgctt
    15061 ttgaaaaatc cgctctaatc tacaaggaag caaaaaaagc aaaaaatgat aaagaaaaaa
    15121 tcgcaatttt aaacaaatac tatgatgcaa atatcaaaaa ttatccaaaa gtaagtgatg
    15181 cagaattaaa agaagttttt tccttatatg aaaaatatcg ctcattaggt cttagcgcta
    15241 ctccaactat tattaaataa acctaatgtc taaatttgct ttaattttaa gcttttttat
    15301 agcactcttt atgagtgctt gcaccaatgc aactttcaca caaagcttta ttcaaacaag
    15361 caatgaaggc atttttatca gatcacaaaa acaacaaagt tttaaaattt cctttcaaaa
    15421 tcctagtcaa cttcaaacta ctctagatag agatttggct ttaaaactta aaaatttagg
    15481 cttaaaagaa gtaaaagaga atgcagatta tgaaatttta atcaatcttg tagatatgaa
    15541 aaagcattct tatgctcaaa aaatcacaac ttcagcaaga tttttttatg attttgatcc
    15601 tttggaaagc gatggagaat ggatggtaga aaactactat actatgcaag ttaatttaca
    15661 aatcaactct aaaaatcaca attctcaaaa aacaagtctt cttgcaagaa cagcttatct
    15721 tggaaataaa gaacgctgtc aattatcttt agaaaataaa attataaatc aaatagtgag
    15781 ttttttttat ttttaagaaa agacaatcaa gagtataaaa actcttgatt ttaagaatta
    15841 ttaagcaaaa taaggtttga tttgttctac ccaagcatca attcttgatt cagtttgatc
    15901 ttcttgatta tcattgtcaa gagcaagtcc aacaaattta ccatctacaa ccgcatcgct
    15961 tgcttcaaat gtataaccat cagttgaaac ttctcctacc aaatttgcac ctgcatcttt
    16021 taaattttga gctaatttac ccatgccgcc acaaaaagtg tcagaataac tttcactatc
    16081 acccatacca aatacagcta cagtttttcc accaagacta agccctgaaa aatcaaaacc
    16141 atcccaatca tcttgtaaat caccacttcc ccaagttgaa gttccacaaa ttaatttatc
    16201 gtaagaattc attttagctg catcaatatc tgagatatta aaaacatcac taattccaag
    16261 ttttgaagca attgtattag ccgctccttc tgtatttccc atagcactac catagattac
    16321 tgctactgac attattttct ccttataatt tgatttgata ttttatacgg aactaatttt
    16381 aacatagttt tgtttaaatc acacaaaaaa tgttttattt caataaaatg tgtgaaattt
    16441 ttgttacgcg gacaaacaat ataaaatttt tcaaaattat tttcttttat taaattcaat
    16501 aattcataaa tttcattttc aatttctaaa ttatgtgtat taatctcttt gcaaagtggc
    16561 aaaattgcaa atttcttatc tattataata agatcaccat cttgatctat attttttcca
    16621 ttattttgaa aagaaacctt atcataaaca taggagctaa ataaaatttg cgcatcaaaa
    16681 caaatgccat aaagataaat tcttaaaagt cttaaaagat cgacattctt agatatttta
    16741 gtattaaaaa tcaagctttt tcttttttga aagtaaaaag cgtatgtatt aagcttgata
    16801 tttatatttt gaatcttacc aaatgaaaca tgcattatat tatgcaaaaa atttccaaat
    16861 atcattttta aactcttggt attttttgca tataaaagag gaatttttag agcactatca
    16921 acgctcgcat tatattgagt taaaaaagtc aacataagct cttgattgtt taaatagcga
    16981 taaatttgcg gtataaattc ttgcttatca tcaaatccaa ataacatctt taacctttat
    17041 agcaagaaaa ttctttatta agattaaaaa ttttacaata ttcacaatac acacaactta
    17101 cacttctttt tgcacaaact aatggaattt tacgcttttt agcttcattt ttgatttttt
    17161 tcatagtatt atgatttaaa aagcttgtta acattactat acattctgta tcacaaggaa
    17221 tcggcttgcg attaactcta ttttcattac gtgcatccca gtgttctatt tttttagcac
    17281 ctaaatcatg taaaacagct ctaataggag tgatttcatc tgcaccaata accaaaactg
    17341 acataaattc tccttt
//
LOCUS       DAPIYB010000032        17159 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.032, whole genome shotgun sequence.
ACCESSION   DAPIYB010000032 DAPIYB010000000
VERSION     DAPIYB010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17159)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17159)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17159
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.032"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            57..1034
                     /locus_tag="RJ318_000831"
     CDS             57..1034
                     /locus_tag="RJ318_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HDV7430718.1"
                     /translation="MLKRLALLIALSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQK
                     DFWLSEIGDKNISLGYYDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEIITGLMG
                     DKKIEGDLKTPVGFYELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYP
                     LDGSRLDEFKTRGCIALFNNNLEKFAKVVQDKKVFVMTEEKEKIRAKKDQIASLLADL
                     FTWKLAWTNSDTNAYLSFYDEQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINI
                     SPYPNLENETMYRISFYEDYYTKNYRFRGDKILYVKIDSKGKMKILAEQ"
     gene            1035..2021
                     /locus_tag="RJ318_000832"
     CDS             1035..2021
                     /locus_tag="RJ318_000832"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDV7430719.1"
                     /translation="MSLIKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLL
                     APLAKNLGVSFVAVKSEEEAREIEEFFENILILSHRPHGNENSRFIYALNDISQVKNY
                     KQDIKIHLKIDTGMHRNGICVENLEHAINLIQGSDLKLTGMFTHFASADEMDGSFFVQ
                     KENFQKAKKIVKKYFSNLLFHSYNSAALFRGKIPEDEYCRVGLVQFGYGDSNLKRVLS
                     LYAHRLSQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFRYNGRGELVLGNGKA
                     MLGKMSMDSFSCENSGEEICVFKDADIWADFFHTINYEILVKLNPNIQRVLV"
     gene            2024..2491
                     /locus_tag="RJ318_000833"
     CDS             2024..2491
                     /locus_tag="RJ318_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HDV7430720.1"
                     /translation="MFNIVLVHPRIPQNTGSIGRMCFNAGFKLHIVKPIVFDISQKAV
                     RRAGLDYWDKLEPIIWENLEEFLNENMIYKNRFFFATTKSQKAYFDAEFQKNDFLFFG
                     SESYGLPMELMQLNWENAITIPMKSYGRSLNLATSVGIISYEALRQNFRNFAS"
     gene            2595..4061
                     /locus_tag="RJ318_000834"
     CDS             2595..4061
                     /locus_tag="RJ318_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HDV7430721.1"
                     /translation="MNLDIMLDFANKASDIIANKIVPNTDIIMVVLLIVCGLYYSFLT
                     RFVQFRMLSSVFKILTEKNEGHAKEHISPFQALMISTASRVGIGNIAGISLALATGGA
                     GALFWMWVMAFFGGASAFAESTLAQVYKSKDDTGGFKGGPAYYIKKALGSHFFGAFFA
                     FILIITYAYGFNGLQSQTMTSSFKVYYDMFNPNAAVDFASSSWPMIIGIVLTIFGAWM
                     FFSHHTKIGKISSLIVPFMALAYVLLAVIAVLMNFDKIPSVIHMILQSAFDFKAIFGG
                     FAGSALVIGIKRGLFSNEAGMGSAPNAAAAALTSHPAKQGVIQAFSVLIDVVVCTSSG
                     FLVLFSMAYLGLGENKIDGGMPLVQEAMREYYGSFGIHFITIAIVLFAITSLIGNYYY
                     AQANVKYLTNSKFVMNLFRITAVAMIFIGSQMNLKLAWNLADLTMAFMATTNIISLLL
                     LGGIVNKVLKDFNTQQKSGIDPKFNASKLGIKNAECWD"
     gene            complement(4089..4817)
                     /locus_tag="RJ318_000835"
     CDS             complement(4089..4817)
                     /locus_tag="RJ318_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDV7430722.1"
                     /translation="MIEVKNLQKKYGELEVLKNINTTISKGDVIAIIGPSGGGKSTFL
                     RCINRLELADSGEILINKQNILDKEIDINKIRQKVSMVFQHFNLFANKNVMENLCLTP
                     IKTGILSQEEAIKKAKLLLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILF
                     DEPTSALDPEMIGEVLSIMKDVAKEGLTMLVVTHEMGFARNVANRIFFMDKGKIAVDA
                     SPKEVFENPSNERLREFLNKVLNH"
     gene            complement(4810..5553)
                     /locus_tag="RJ318_000836"
     CDS             complement(4810..5553)
                     /locus_tag="RJ318_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7430723.1"
                     /translation="MNQKNIRIFVFFVIIILWGYFSFPIEILKIQDPSGVASYGYTEN
                     AKAYLKSYLITLLLTACAVIIGVIIGFSLAILRFSKFKTLNFIIDEYIDIIRGTPVIL
                     QLMIFAFVIFTFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYK
                     TSMKEIILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNPKPI
                     IFTGLVYYVSVKIFSYFAKKLELRMNKND"
     gene            5636..5815
                     /locus_tag="RJ318_000837"
     CDS             5636..5815
                     /locus_tag="RJ318_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430724.1"
                     /translation="MLEFPKNKVVFMEILDFILIVIFVFLMIVLVIGFNHQMMQKNKE
                     REERFKKYKKGEQNE"
     gene            5808..6377
                     /locus_tag="RJ318_000838"
     CDS             5808..6377
                     /locus_tag="RJ318_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HDV7430725.1"
                     /translation="MSKKVLIPLAQGFEEAEFIGIADVLKRAKELNPDLEVVIASLNS
                     ELLVKGANSISIKADCSIEDVDIENLDAIALAGGFEGMMNLKNSNVILNIIKQLHSKN
                     KIVAAICASPIVLNEAGVLEGEFACYPSCEVGLNGNRVNKAVVVNKNVITSAGPATAI
                     LFGLELAKKLCGDEIYQKLYEGMLLPLTK"
     gene            complement(6407..6772)
                     /locus_tag="RJ318_000839"
     CDS             complement(6407..6772)
                     /locus_tag="RJ318_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HDV7430726.1"
                     /translation="MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIP
                     KKYFKDFQEFDPELMAKMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEVFHLHFHML
                     GGFELPKEKTKKENPQALF"
     gene            6895..7887
                     /gene="pheS"
                     /locus_tag="RJ318_000840"
     CDS             6895..7887
                     /gene="pheS"
                     /locus_tag="RJ318_000840"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDV7430727.1"
                     /translation="MQNFIEQIQKCENLNDLEAIRISVLGKKGILTEGFTKLKELEDE
                     AKKEFAAKLNAQKEIFNEAYLAKFKDLENLALEERMKQDALNFNYFDESITTGALHPV
                     MSTMDKIIEYFIALNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFDDKRLLR
                     TQTSPVQIRTMLAQKPPIRMIAPGAVFRRDFDITHTPMFHQVEGLVVEEGQKVSFANL
                     KSVLEDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGKGCRVCKHTGWLEVLG
                     CGIVDPNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDLRLLEQFR"
     gene            7884..10205
                     /locus_tag="RJ318_000841"
     CDS             7884..10205
                     /locus_tag="RJ318_000841"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDV7430728.1"
                     /translation="MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDK
                     VVVGYVKEKIKHENSDKLSICQVDIGSEILQIVCGAANVDAGQFVTVATKGAIMPNGM
                     EIKEAKLRGVDSCGMLCSSLELGFEKINEGIMLLDESIGKLELGRPLNTYEIFNDELI
                     EVELTPNRGDCLSIYGIARDLAAALNLNLKEPKPFKESENVLGIGRILRLAAEKELNG
                     LYNYRAIGLKEEIQTNLLLSLRLAQIEGLGKNSIENLLNYATHSTGVLFNAYDLSSFS
                     EKDEEFTINLSKQVHGETKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYTDPLV
                     IADAKIYHKDQDEKMLYRSFRGSEPKLNLGMDFLLGIFEQIPNLVIYSSSQQILTDKE
                     LPIIPISIEGISDIIGQNVDKDEVLKILKKLGFELILSGEGLINVKAPLHRPDIKNLS
                     DICEEVVRIIGIDNIASKGLEFIEKNRLNSAYKNYIEFLNLRKRAVASGYFESLHYVL
                     DNGEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELG
                     AVFNVNNQELNRIAFIHSGLKEEAKISNKAKPESVQFYDFLLDIKNIIGDFKLKSSKY
                     NILSPYEQADIYLSDIKVGFIGRLHLKIENERDLPKTYICELDLDLIRQDFKIAKPYS
                     KFPAIIRDLSVLIPKGFEYNQIKNCIEELNLEILENFRLVDIYSDENLKEFYSITISF
                     SFRDINKTLEDNQVNECMDKILNTLKNLGLDLR"
     gene            10202..11488
                     /gene="aroA"
                     /locus_tag="RJ318_000842"
     CDS             10202..11488
                     /gene="aroA"
                     /locus_tag="RJ318_000842"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDV7430729.1"
                     /translation="MKIYKLQTPVNAILENIAADKSISHRFAIFSLLTQEENKAQNYL
                     LAQDTLNTLEIIKNLGAKIEQKDSCVKIIPPKEILSPNCILDCGNSGTAMRLMIGFLA
                     GISGFFVLSGDKYLNNRPMRRISKPLTQIGARIYGRNEANLAPLCIEGQNLKAFNFKS
                     EISSAQVKTAMILSAFRADNVCTFSEISLSRNHSENMLKAMKAPIRVSNDGLSLEINP
                     LKKPLKAQNIIIPNDPSSAFYFVLAAIILPKSQIILKNILLNPTRIEAYKILQKMGAK
                     LEMTITQNDFETIGEIRVESSKLNGIEVKDNIAWLIDEAPALAIAFALAKGKSSLINA
                     KELRVKESDRIAVMVENLKLCGVEARELDDGFEIEGGCELKSSKIKSYGDHRIAMSFA
                     ILGLLCGIEIDDSDCIKTSFPNFIEILSNLGARIDY"
     gene            11478..12311
                     /locus_tag="RJ318_000843"
     CDS             11478..12311
                     /locus_tag="RJ318_000843"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDV7430730.1"
                     /translation="MIIELAKNYGFCFGVKRAIKKAEQIKDAATIGPLIHNNEEISRL
                     QKNFNVKTLENIQALSNEKKAIIRTHGITKQDLEELRKKDIEIFDATCPFVTKPQQIC
                     EQMSKEGYEVVIFGDENHPEVKGVKSYVSTKAYVVLDKKELQNIKLPNKIAVVSQTTK
                     KPEHFMEIVNFLILKTKEVRVFNTICDATFKNQDAIKELSLKSDVMVVVGGKNSANTK
                     QLFLIAKTNCEDSYLIETEEELKKEWFLDKKHCGISAGASTPDWIIQKVIAKIKNFKI
                     N"
     gene            12443..14113
                     /locus_tag="RJ318_000844"
     CDS             12443..14113
                     /locus_tag="RJ318_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDV7430731.1"
                     /translation="MSEVNKKVQGGVDDYLEEEDFGQLLEAFDKSREEATTEGVIVEI
                     KNDEVYVDIGKKSEGILALSEIQGDNSKLLFNVGDSIKVAVMGSRGGRSLLSHKKALR
                     KEKVIEFIKNYQENQDDIFTVKVVGKNKGGLIVVDENDVEFFLPKSQYGFKETNNIIG
                     KTFKVKIIKIDKDEQSIIVSRKKTLDDERRKRKELINNIAQQEDLIEGIVKKITTYGM
                     FVDVGGVDGLVHYSEISYKGPVNPGTLYKEGDKVPVKVIKYDKERKHLSLSIKAALPD
                     PWSEIKDTLDVGDTIKVIVSNIEPYGAFVDLGNDIEGFLHISEISWDKNIKNPKDYIN
                     KGQEIDVEVIEINPNERRLRVSLRNLLSRPFDGFMKSYKIADVVEGEITSVTSFGAFV
                     KLGGIEGLLHNEDASWDRNDKCKDKFSQGDKIKVKIIKIDEENQKISLSTKELSSSPV
                     QEYAKIHKVGDIVKGTIRDIKDFGVFVELSKNVDALIHKEDISTSMLENLKIGDDIEA
                     AIVFIDEKKNRIRLSVKNLVRMKEREVLNEINNDDKVTLGDIIKDQLA"
     gene            14113..14601
                     /locus_tag="RJ318_000845"
     CDS             14113..14601
                     /locus_tag="RJ318_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430732.1"
                     /translation="MKKYITISILSILLLILLAVVFTLLWQFKANVNFIPQFAKDTNT
                     QPSIQTQNQDLSWQEELAKWPTRDFTPAAEKFTLYFDADTSELKEKNKYYQLIVGKYD
                     IYSMFCLRQTLNSFNVKYFLLKSGHSPEIFLDTGNEKLIDDIIKELKKYKINTEVKEI
                     WL"
     gene            14598..16181
                     /locus_tag="RJ318_000846"
     CDS             14598..16181
                     /locus_tag="RJ318_000846"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDV7430733.1"
                     /translation="MKKKIIVCDAILDKGVDILRKAEDIELIEAAKVPKDELMQMLSD
                     VEVAITRSSTDVDVNFLNHAKKLKALVRAGVGVDNVDIPECSKRGVIVMNVPTANTIA
                     AVELTMAHLLTSARSFVNAHNFLKIERKWEREKWYGIELMNKTLGVIGFGNIGSRVAI
                     RAKAFGMKILAYDPYISASKITDLDMEQAKNLDEILEKSDFITIHTPKTKETNGMIGK
                     QEIAKMKDGIRLINCARGGLYTEEALYEGLKSGKIAWLGIDVFDKEPATNHPLLDFEN
                     ISVTSHLGANTLESQDNIAREACEQALSAARGVAYPNALNLPIKTEDLPPFVAPYIEL
                     VSKMAFLAVQIDKNPIKSIKLEAEGIIGEYANSMLTFAAVGALGGILGEKINYVNAEF
                     VAKEKGVELSCETLPNSGYNNKLSVKIITENSNISVSGTVFNENEQRIVGLNGFKTDF
                     KPKGKMVIFKNKDIPGVIAKISSVLAAKNINIADFRLGRDGFGYALAVVLIDEKVQKE
                     VLDELKQLEACVFVQYVEI"
     gene            16168..16830
                     /locus_tag="RJ318_000847"
     CDS             16168..16830
                     /locus_tag="RJ318_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV7430734.1"
                     /translation="MLKFKILIIEDDIDLNELLVLKLKSSGYEVISLADFFGVEDLLD
                     NEQIDLLIVDRNLPSGDSLEKIQDLREQGYKEAVIFLTAKALHQDLLEGFESGCDDYV
                     CKPFDFNELLLRIKAILKRHKKEEEKLSFGDFILDLANYEFFYKNQKLEISNLDYELL
                     KCFFENPNTLLTRQFLSESVWKDDTTSDKTINIALTRLRNKFPKLKDHIISVRGVGYK
                     LC"
     gene            16824..>17159
                     /locus_tag="RJ318_000848"
     CDS             16824..>17159
                     /locus_tag="RJ318_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDV7430735.1"
                     /translation="MLKTKNIFIVFFVVLALIFGFIFYTFTNSYLNFLLTKQYEQKIK
                     SLDDVLKFSLLEHLNDANIKDFAKDTRADFIILNNDMKISSVKNPDFFSNLKEGEILN
                     FNSKKILTKS"
BASE COUNT         6207 a         2074 c         3027 g         5851 t
ORIGIN      
        1 tattataatc acaaacattt ttgacttaaa aaatttgaaa tacctaagga aaaacattgt
       61 taaaacgact tgctttatta attgcacttt cttcattgat gttgcatgcc tcagatcttg
      121 ttaaaattta tcttaatcaa ggattagatg ctgttggtgt agcgattgaa aaagaattaa
      181 ctcaaaagga tttttggtta agtgaaatag gagataaaaa tatttcactt ggatactatg
      241 atgataatgt tgctatcgtg cttacaaata aaacagataa aattctccgt gtttattctt
      301 acgaggacgg aaaaataaga aaagattttg aacaaaaaga aataataact ggattaatgg
      361 gtgataaaaa aatagaagga gatttgaaaa ctccagtagg tttttatgag ttaggccgta
      421 agtttaatcc aggtgatcct tattatggtc cctttgcttt tgccacaact tatccaaatt
      481 tacttgataa agtacaagga aaaacaggtg gtggtatttg gatccatggc tatcctttag
      541 atggttctag acttgatgaa tttaaaacaa gagggtgtat tgctttattt aataataatt
      601 tggagaaatt tgcaaaagtt gtgcaagata aaaaagtttt tgttatgaca gaagaaaaag
      661 aaaaaattag agctaaaaag gatcaaatcg ctagtttatt ggctgatctt tttacatgga
      721 aactagcttg gacaaatagt gacactaatg cctatttaag tttttatgat gagcaagaat
      781 ttaaacgttt tgataaaatg aaatttgaac agtttgcttc catgaaaaaa tctatttttt
      841 ctcgtaaaga agataaaaag attaaatttt cagatattaa tatcagccct tatccgaatt
      901 tagaaaatga aactatgtat agaatttcat tttatgagga ttattacact aaaaactatc
      961 ggtttagagg cgataaaatt ttatacgtta agatagatag taaaggtaaa atgaaaattt
     1021 tagcagagca ataaatgtct ttaataaaaa ttgatcaaaa agcttatgaa tacaatttaa
     1081 gacatattgc taaaaaaata gggagttttc aaagattaat ttgtgttttt aaagataatg
     1141 catatggaca tggagctaag cttttagctc cattagccaa aaatttagga gtttcttttg
     1201 ttgctgttaa gagtgaagaa gaagctcgag aaatcgaaga attttttgag aatatattaa
     1261 tactatcaca tcgtcctcat ggtaatgaaa attctcgatt tatttatgct ttaaatgaca
     1321 tttctcaagt aaaaaattac aagcaagata taaaaataca tctaaaaata gatacaggca
     1381 tgcatcgcaa tggaatttgt gtagaaaatt tagagcatgc tataaatctt attcaaggta
     1441 gtgatttaaa acttactgga atgtttacac attttgctag tgcagatgaa atggatggaa
     1501 gtttttttgt tcaaaaagaa aattttcaaa aagctaaaaa gatagtaaaa aaatattttt
     1561 caaatttatt atttcattcg tataattctg cagcattatt tagagggaaa attcctgaag
     1621 atgaatattg tagagttggg cttgttcaat ttggatatgg ggattcaaat ttaaaaagag
     1681 ttttaagttt gtatgctcat agattaagtc aaaggatttt acaaaaagga cagagcatag
     1741 gatatggagg catttttact gctgcaaagg atatggaagt agcaacttat gatttgggtt
     1801 atgctgatgg tctttttcgc tacaatggaa ggggggagtt agtgcttgga aatggaaaag
     1861 caatgcttgg aaagatgtca atggatagtt tttcttgtga aaattctggt gaggaaattt
     1921 gcgtgtttaa agatgctgat atttgggctg atttttttca tactattaac tatgaaattt
     1981 tagtaaaatt aaatcctaat attcaaagag ttctagtata aatatgttta atatagtttt
     2041 agttcaccct agaataccgc aaaatacagg tagtataggt agaatgtgct ttaatgctgg
     2101 ttttaaactt catattgtta aaccaattgt ttttgatatt tcacaaaagg ctgttagaag
     2161 ggcaggactt gattactggg ataaattaga gcctattatt tgggagaatc ttgaagaatt
     2221 tttgaatgaa aatatgattt ataaaaatcg cttttttttc gcaacaacta agagtcaaaa
     2281 agcttatttt gatgcagaat ttcaaaaaaa tgatttctta ttctttggaa gtgagagtta
     2341 tggtttgcct atggaattaa tgcaattaaa ttgggaaaat gctataacta tacctatgaa
     2401 atcttatgga agaagtttaa atttagccac aagcgttggt ataatctctt atgaagcttt
     2461 aagacaaaat tttagaaatt ttgcttctta aaagtttcaa atttacacaa tagcttaaaa
     2521 caaataaaat cataaagtcc tttttataaa aattatgtta aagtaaaatt tagattattt
     2581 tttgaggagt ttagatgaat ttagatatta tgctagattt tgccaataaa gcgtctgata
     2641 ttatagctaa taagattgtc ccaaatacag acattattat ggtagtttta cttattgttt
     2701 gtgggcttta ttatagtttt ttaactcgct ttgttcagtt tcgtatgttg agttctgtat
     2761 ttaaaattct tacagaaaaa aacgaaggac acgctaaaga acatatttca ccttttcaag
     2821 cattaatgat ctcaactgct tctagagttg gtataggaaa tattgctgga atttctttgg
     2881 cattggctac aggtggagct ggtgctttat tttggatgtg ggttatggca ttttttggtg
     2941 gtgcctcagc atttgctgaa agtaccttag ctcaagttta caaatcaaaa gatgatacag
     3001 gcgggtttaa aggtggtcca gcttattata taaaaaaagc cttaggctca catttttttg
     3061 gagctttttt tgcttttatt cttattatta cttatgctta tggatttaat ggacttcaaa
     3121 gtcaaacaat gacttcgtct tttaaagttt attatgatat gtttaatcca aatgctgctg
     3181 tagattttgc atcaagttct tggccaatga ttattggtat tgttttaact atttttggtg
     3241 catggatgtt tttttctcac catactaaaa taggtaaaat tagttcttta attgttcctt
     3301 ttatggcttt agcttatgtt ttacttgccg tgattgctgt tttaatgaat tttgataaaa
     3361 ttccttctgt gattcatatg attttacaaa gtgcttttga ttttaaagcg atttttggtg
     3421 gttttgctgg ttctgctttg gttataggga ttaaaagagg acttttttca aatgaagcgg
     3481 gtatgggctc ggcacctaat gcagctgcag cagctttgac aagtcatcca gctaaacaag
     3541 gtgttataca agccttttca gttttaattg atgttgttgt ttgtacaagt tctggatttt
     3601 tagttctttt ttctatggca tatttaggac ttggagaaaa taaaattgat ggtggaatgc
     3661 ctttagttca agaagctatg cgtgagtatt acggtagctt tggaatccat tttattacta
     3721 tagctattgt tctttttgca ataacttctt taataggaaa ttattattat gctcaagcta
     3781 atgttaaata tttaacaaat tccaaatttg taatgaattt gtttagaatt acagctgtgg
     3841 ctatgatttt tataggctcg caaatgaatt taaaacttgc ttggaatttg gctgatttga
     3901 ctatggcttt catggcaacg acaaatatta tatctttatt gcttttaggt ggtatagtaa
     3961 ataaagtttt aaaagatttt aatacgcaac aaaaatctgg tatagatcct aaatttaatg
     4021 ctagcaaact tggaattaaa aacgctgaat gttgggatta aaattcataa gccttagtgg
     4081 cttatgaatt aatgatttaa aaccttgttt aaaaattctc tcaatctttc attgctagga
     4141 ttttcaaata cttctttagg gcttgcatca acagcaattt ttcctttatc cataaaaaat
     4201 atacgattgg caacatttct agcaaagccc atttcatgag ttactacaag catagttaaa
     4261 ccttcttttg caacatcttt cataatgctt agaacctcgc ctatcatttc aggatctaga
     4321 gctgaagtag gttcatcaaa taaaataaca tcaggattca tcatcaagct tctagcaata
     4381 gctatgcgtt gtttttgtcc accagagagc ttatggggca ttatattttc tttgtctgct
     4441 aaacccacct tagcaagaag taattttgct ttttttatgg cttcttcttg acttaaaatt
     4501 cctgttttaa ttggtgttaa acataaattt tccataacat ttttattagc aaaaagatta
     4561 aaatgctgaa ataccatgct aactttttgc ctgatcttat taatatcaat ttctttatca
     4621 agtatgtttt gcttattgat taaaatttcc ccactatcag ctagttctaa gcgattgatg
     4681 cagcgtaaaa atgtactttt tccgcctcca cttggaccta tgatagctat tacatcgcct
     4741 tttgagattg tagtgttaat attttttaaa acttctaatt ctccatattt tttttgtaaa
     4801 tttttaactt caatcatttt tattcatcct aagttcaagt ttttttgcaa aataactaaa
     4861 aatttttaca cttacataat aaacaagtcc agtgaaaata ataggctttg gattgtaaag
     4921 tacggcttgc aagctttgac tttgcatggt aatatcaata acactaataa atcctacaac
     4981 agaagtttcc ttaaataaag aaataaattc attagctaat gcaggtagaa tgtttttagt
     5041 agcctgagga agaataattt ctttcattga agttttgtaa tcaagtccca ttgctcttgc
     5101 agcttccatt tgtcctttat ctacactatt aatgccactt cttacaattt ctgctatata
     5161 agccgagcta ttaagtccta gtgcaagaat ggctgcataa aggttgtcta taaaagtaaa
     5221 aattacaaaa gcaaaaatca tcaattgtaa aattaccggt gttcctcgta taatgtctat
     5281 atattcatct ataataaaat taagtgtttt aaatttagag aagcgtaaaa tagctaagct
     5341 aaaaccaata atcactccga taataacagc acaagcagtt aataaaagcg taataagata
     5401 actttttaaa taagcttttg cattttctgt atagccatag cttgcaactc cactaggatc
     5461 ttgaattttt aatatttcta tcgggaaaga aaaatagccc cataaaataa taataacaaa
     5521 aaaaacaaaa attcttatat ttttctgatt caatttgtaa accttttcag agaaattatt
     5581 taaaaaaaga ttttatagaa atatctttga attttctcta aagatttaaa aaaatgtgtt
     5641 agaatttccc aaaaataagg ttgtatttat ggaaatttta gatttcattc taatagttat
     5701 ttttgtgttt ttaatgattg ttttggttat aggtttcaat catcaaatga tgcaaaaaaa
     5761 caaagaaaga gaagaaagat ttaaaaaata taaaaaagga gaacaaaatg agtaaaaaag
     5821 tattaattcc attggctcaa ggttttgaag aagctgaatt tataggaatt gcggatgttt
     5881 taaaacgagc aaaagaatta aatccagatt tggaagttgt tatagcttcg ttaaacagtg
     5941 agttattggt aaaaggtgct aatagcatta gtataaaagc agattgttct atagaggatg
     6001 ttgatataga aaatttagat gctattgctt tggcgggtgg ctttgaaggt atgatgaatc
     6061 ttaagaattc aaatgttatt ttaaatatca ttaaacaact tcatagcaaa aataaaattg
     6121 ttgccgcaat ctgtgcttct cctatagttt taaatgaagc aggtgtttta gagggcgagt
     6181 ttgcttgtta tcctagttgt gaagttggac ttaatggaaa tcgtgttaac aaggctgtag
     6241 ttgtaaataa aaatgttata acttcagcag gtccagctac ggcaattctt tttggtttag
     6301 aactagctaa aaagttatgc ggtgatgaaa tttatcaaaa attatacgag ggaatgttgc
     6361 tacctttgac aaaatagttt aaatggtagt ttttctacca tttaaattaa aataaagctt
     6421 gaggattttc ttttttagtt ttttccttag gcagttcaaa acctccaagc atatgaaaat
     6481 gcaaatgaaa aacttcttgt ccactatttt ttccacagtt tgttaccaag cgatatccac
     6541 ttttatctac acctaaaaga acagctaatt cttgtatgaa acttgtcatt ttggccataa
     6601 gttcaggatc aaattcttga aagtctttaa aatatttttt agggattata agtatatgta
     6661 tgggtgcttt gggtgcaata tcatgaaatg ctagaaaatc gtcactttca agcactttat
     6721 tgcatggaag tttaccttca actatgagtt caaaaattgt tttttcttgc attatttatc
     6781 cttttttatt gttggtttga tacaattata tctttaaagt ttggttttta tgctgaattt
     6841 aaaatagttt ttaatagaat tagaacttga aatattttat ttaaggtaag aaaattgcaa
     6901 aattttatag aacagattca aaaatgtgag aatttaaatg atttggaagc cattaggatt
     6961 tccgttcttg gaaaaaaagg tattttaaca gaaggcttta caaagcttaa agagttagaa
     7021 gatgaggcga aaaaagaatt tgctgctaaa ttaaatgcac aaaaagaaat atttaatgag
     7081 gcttatttag ccaaatttaa agatttggaa aatcttgctt tagaagaaag aatgaaacaa
     7141 gatgctttaa attttaacta ttttgatgaa agtattacaa caggtgcctt gcatcctgtt
     7201 atgagcacca tggataaaat catagaatat tttatagctt tgaattttag catagaaaaa
     7261 gggcctttaa tagaagatga ctttcataat tttgaagcgt taaatttacc taaatctcac
     7321 cccgcaagag atatgcaaga taccttttat tttgatgata aaaggctttt aagaacacaa
     7381 acttcgccag tgcaaatacg gacaatgctt gcacaaaaac ctcctattag gatgatagcc
     7441 cctggtgctg tatttagaag agattttgat attacgcata ctcctatgtt tcatcaagtt
     7501 gaaggccttg tggtggaaga agggcaaaag gttagctttg caaatttaaa aagtgtattg
     7561 gaagattttt tgcgttatat gtttggagat gtgaaagttc gttttcgtcc aagttttttc
     7621 ccatttacag aaccttctgc tgaagttgat atttcttgtg tattttgcaa aggaaagggt
     7681 tgtagagttt gcaaacatac aggttggctt gaagttttag gatgtggaat agttgatcct
     7741 aatgtttata attttgttgg ttatgaaaat gtaagtggtt atgcttttgg attgggagta
     7801 gaacgttttg caatgctttt gcatcaaatt ccagatttaa gatctttatt tgaaggtgat
     7861 ttgagattat tggagcagtt tagatgataa ttactaaaag ttggttgaat gattggttag
     7921 aacttgaaga aataagttca gataaaatag ctaaaacttt aaactctata ggtatagaag
     7981 ttgatagggt tggcgcttta aaggctccag ataaagttgt tgtaggctat gttaaggaaa
     8041 aaattaaaca tgaaaattca gataaattaa gcatttgtca agttgatatc ggaagtgaaa
     8101 tcttgcaaat tgtctgcggt gctgcgaatg ttgatgcagg acaatttgta actgttgcaa
     8161 ctaaaggtgc tatcatgcca aacggtatgg aaataaaaga agcaaaattg cgaggagtgg
     8221 attcttgtgg tatgctttgt tctagtttag aactgggttt tgaaaaaatc aatgaaggaa
     8281 ttatgctttt agatgagagt atagggaaat tagaacttgg gagaccttta aatacttatg
     8341 aaatttttaa tgatgagcta atagaagtgg aacttactcc taataggggt gattgtttaa
     8401 gtatttatgg tatagctcgt gatttagccg cagctttaaa tttaaattta aaagaaccaa
     8461 aaccatttaa agaaagtgaa aatgttttag gtatcggtag aattttgcgc ttagcagctg
     8521 agaaagaact taatggactt tataattatc gagccatagg gctaaaagaa gaaattcaaa
     8581 caaatttatt gcttagttta agacttgctc aaattgaagg tttgggaaaa aattccatag
     8641 aaaatttatt aaattatgca acgcattcaa ctggtgttct ttttaatgct tatgatttaa
     8701 gtagtttttc tgaaaaagat gaagaattta ccattaattt aagcaagcaa gtgcatggag
     8761 aaacaaaagt atcttacaaa gataaacttt taagctttag cggaattttc caaaataatg
     8821 aaagtagatg taaagatgat tctaaaataa ttattattga ggctaattat accgatccat
     8881 tggtaattgc agatgctaaa atatatcata aagatcaaga tgaaaaaatg ctttatagaa
     8941 gttttagggg aagtgaacct aaattaaatt taggaatgga ttttttgctt ggtatttttg
     9001 agcagattcc aaatcttgtt atttatagtt cttctcaaca aattttaact gacaaagaat
     9061 taccaatcat accaataagt attgaaggta ttagcgatat aataggacaa aatgttgata
     9121 aagatgaagt attaaaaata ttaaagaaat taggttttga gctcatactt tcaggtgaag
     9181 ggcttataaa tgttaaagca cctttacatc gtcctgatat taaaaattta tcagatattt
     9241 gcgaggaagt tgtaagaatt ataggtattg ataatattgc ttccaagggt ttagaattta
     9301 tagaaaaaaa tcgtttaaat tctgcatata aaaattatat tgagttttta aatttaagaa
     9361 aaagagcagt agctagtggt tattttgaaa gcttacatta tgttttggat aatggagaag
     9421 aacttaaaag attaggtttt gactctgtta aattaaaact aatcaatcca attacagcag
     9481 aacttaatac tttaagaaca acccttttaa atcatttgtt aaatgcagca agtttaaatg
     9541 caaaaaattc taaaaaaatt attaaacttt ttgaattagg ggctgttttc aatgttaata
     9601 atcaagaatt aaatcgtatt gcatttatcc attctggctt aaaagaagaa gctaaaattt
     9661 ccaacaaggc caaacctgaa tcggtgcaat tttatgattt tcttttagat attaaaaata
     9721 ttataggtga ttttaaacta aaatcatcaa aatataatat tttaagccct tatgaacaag
     9781 cagatattta tctatcggat attaaagtag gttttatagg ccgtttgcat ttaaaaatag
     9841 aaaatgagag agatttacca aaaacatata tttgcgaact tgatttagat ttaatcaggc
     9901 aagattttaa aatagctaag ccttactcca aattcccagc tatcattaga gatcttagcg
     9961 tgttaatacc taaaggtttt gaatacaatc agattaaaaa ttgtatcgaa gaattgaatt
    10021 tagaaatact tgaaaatttt cgtttagttg atatttatag tgatgaaaac cttaaagaat
    10081 tttatagcat tactataagt ttttctttta gggatataaa taaaactcta gaggataatc
    10141 aagtcaatga atgtatggat aaaattttaa atactcttaa aaatttgggt cttgatttaa
    10201 gatgaaaatt tacaaattgc aaacccctgt aaatgccata cttgaaaata tagcagcaga
    10261 taaaagtata tctcatcgtt ttgctatatt ttcgctttta acacaagaag aaaataaggc
    10321 tcaaaattat ctcttagctc aagatacttt aaacactctt gaaattataa aaaatcttgg
    10381 agctaaaatt gaacaaaaag attcttgcgt caaaattata ccccctaaag aaattttatc
    10441 tccaaattgt attttagact gtggaaattc aggaactgct atgcgtttga tgataggatt
    10501 tttagcagga atttctggtt tttttgtttt aagtggagat aagtatttaa acaatcgtcc
    10561 tatgagaagg ataagcaaac cacttactca aataggcgct agaatttatg gaagaaatga
    10621 ggcaaattta gctccacttt gcatagaagg tcaaaattta aaagctttta attttaaaag
    10681 cgaaatttct tcggctcaag ttaaaacagc tatgatttta tctgctttta gggctgataa
    10741 tgtatgcact tttagtgaaa tttctcttag tcgaaatcat agtgaaaaca tgctaaaggc
    10801 tatgaaagct ccaataaggg ttagtaatga tggcttaagt cttgaaataa atcctttaaa
    10861 aaaaccttta aaagctcaaa atataatcat tcctaatgat ccttcttcgg ctttttattt
    10921 tgttttagca gctattattt tacctaaatc tcaaattatt ttaaaaaata ttttgcttaa
    10981 tcctactcgt atagaggcgt ataaaatttt gcaaaaaatg ggtgccaaac ttgaaatgac
    11041 aataactcaa aatgattttg aaactattgg tgagatcagg gtggagtcta gcaagcttaa
    11101 tggcatagaa gttaaagata atatcgcttg gttaatagat gaagcgcctg ctttggctat
    11161 agcttttgct ttggctaagg gtaaatctag tttaataaat gctaaagaat tacgcgttaa
    11221 agaaagcgat aggattgctg tgatggttga aaatctaaag ctttgtggtg ttgaagctag
    11281 agaacttgat gatggttttg aaatagaagg tggatgcgaa ctaaaatctt caaaaattaa
    11341 aagctatgga gatcaccgta ttgctatgag ttttgctatt ttaggtttgc tttgtggaat
    11401 cgagattgat gatagtgatt gtataaaaac ttcttttcca aattttatag agattttatc
    11461 aaatttagga gctaggattg attattgaat tagcaaaaaa ctatggtttt tgttttggtg
    11521 ttaaaagagc tattaaaaaa gcagaacaaa taaaagatgc cgcaactata ggccctctta
    11581 ttcacaataa cgaagaaatt tctcgtttgc aaaaaaattt taatgtcaaa actttggaaa
    11641 atatacaagc tttaagtaat gaaaaaaagg ctattataag aactcatggt attacaaagc
    11701 aagatttaga agaattgaga aaaaaagata tagaaatttt tgatgccact tgtccttttg
    11761 ttacaaaacc acaacaaatt tgcgagcaaa tgagtaagga gggttatgaa gttgttattt
    11821 ttggagatga aaatcatccc gaagttaaag gagtcaaaag ttatgtaagt acaaaagctt
    11881 atgtagtttt ggataaaaaa gaacttcaaa atataaaact tcctaataaa atagctgtag
    11941 taagccaaac aactaagaag cctgagcatt ttatggagat agtaaatttt ttaatactta
    12001 aaaccaaaga agtaagagtt tttaacacta tatgtgatgc aacctttaaa aatcaagatg
    12061 ccattaaaga actctcgctt aaaagtgatg ttatggttgt tgtagggggt aaaaactcag
    12121 ccaatacaaa acaacttttt ttaattgcaa aaaccaattg tgaagatagc tatctaattg
    12181 aaaccgaaga agagttaaaa aaagaatggt ttttggataa aaaacattgc ggcattagtg
    12241 caggtgctag tactcctgat tggatcatac aaaaagttat cgccaaaata aaaaatttta
    12301 aaattaatta aaaaatgttt tcaaatagaa taaaaaagtc aaaaatttaa aaaaaattaa
    12361 caaaaataaa aaaacttaac actaattaaa gaaaaataag gtaaaatcaa tcaatttcta
    12421 aaaattattt taaaggacca taatgagcga ggtgaacaaa aaagttcaag gcggcgtaga
    12481 tgattatctt gaggaagaag attttggaca gcttttagaa gcttttgata aatcaagaga
    12541 agaggctaca acagagggtg tgattgtaga gatcaaaaat gatgaagttt atgtagatat
    12601 aggtaaaaaa tctgaaggta ttttagctct tagcgaaata caaggtgaca attctaagct
    12661 attgtttaat gtaggcgata gtattaaagt tgctgttatg ggttctcgtg gtggcagatc
    12721 tttactttct cataaaaaag ctttgagaaa agaaaaagtt attgaattta ttaaaaacta
    12781 tcaagaaaat caagatgata tttttaccgt aaaagtagtt ggaaaaaata aaggcggatt
    12841 gatagttgtt gatgaaaatg atgttgaatt tttcttacca aaatctcaat atggctttaa
    12901 agaaacaaat aatattatag gtaaaacgtt taaagttaaa attattaaaa tcgacaaaga
    12961 tgagcaaagt atcattgttt ctcgtaaaaa aactttagat gatgagagaa gaaaacgaaa
    13021 agaattgatc aataatatag cacaacaaga agatttaatt gaaggtattg taaaaaaaat
    13081 taccacttat ggtatgtttg tagatgtagg aggtgttgat ggccttgttc attacagcga
    13141 aatttcttac aaaggacctg taaatcctgg aacactttat aaagagggcg ataaagttcc
    13201 agttaaagta ataaagtatg ataaagaacg caaacattta tccttatcta taaaagcggc
    13261 tttacctgat ccatggagcg agataaaaga tactcttgat gtaggtgata ccattaaagt
    13321 aatagtatca aatatagaac cttatggtgc ttttgtagat ttaggaaatg atatagaagg
    13381 atttttacat atcagtgaaa tttcttggga taaaaatatt aaaaatccaa aagattatat
    13441 caacaaaggt caagaaattg atgttgaagt aattgaaatc aatccaaatg aaagacgctt
    13501 aagagtatct ttaagaaatt tactttctag accttttgat ggatttatga aatcttacaa
    13561 aattgcagat gtggttgaag gagaaattac ctcagtaact tcttttggtg catttgttaa
    13621 acttggtggt attgaaggtt tattgcataa tgaagatgct tcttgggata gaaacgataa
    13681 atgcaaagac aaattctctc aaggggataa aatcaaggta aaaattatca aaatagacga
    13741 agaaaaccaa aaaatatcat taagcacaaa agaattaagc agttctccag tgcaagaata
    13801 tgccaaaatt cataaagtcg gcgatattgt aaaaggcact atccgtgata ttaaagattt
    13861 tggtgttttt gtagagctaa gtaaaaatgt tgatgcttta attcataaag aagatataag
    13921 cacttctatg cttgaaaatt taaaaattgg cgacgatatt gaagctgcta tagtttttat
    13981 tgatgaaaag aaaaatagaa ttcgcctaag tgttaaaaat cttgttagaa tgaaagaaag
    14041 agaagttctt aatgaaatca ataatgatga taaagtgact ttaggtgata tcattaaaga
    14101 tcagctagct taatgaaaaa atacattaca ataagcattt tgagtatttt attactcatt
    14161 ttgcttgctg ttgtttttac attgctttgg caatttaaag ctaatgtaaa tttcattcca
    14221 caatttgcta aagatacaaa tacacagcca agcattcaaa cccaaaatca agatctttca
    14281 tggcaagaag aattagcaaa atggcctaca agagatttta ccccagcagc agaaaaattt
    14341 accttatatt ttgatgcgga tactagcgag cttaaggaga aaaataaata ttatcaactt
    14401 atagttggaa aatatgatat ttattctatg ttttgcttaa gacagacttt aaattctttt
    14461 aatgtgaagt attttcttct taaatctggc catagtccag aaatcttttt ggatacaggt
    14521 aatgaaaaac ttatagatga tattatcaaa gaattaaaaa aatataaaat aaatacagaa
    14581 gtaaaggaaa tttggttatg aaaaaaaaga ttatagtatg tgatgctatt ttggataaag
    14641 gtgtcgatat tctaagaaaa gctgaagata ttgagcttat agaagctgca aaagttccaa
    14701 aagatgaact tatgcaaatg ctaagtgatg ttgaagttgc tattactaga agttctacgg
    14761 atgtagatgt aaatttctta aatcatgcca aaaaattaaa agcgcttgtg cgtgctgggg
    14821 tgggcgtaga taatgttgat attccagagt gttctaaaag aggagtgatt gtgatgaatg
    14881 tcccaactgc aaatactatt gctgcagttg aactaacaat ggcacatctt ttaacatcag
    14941 ctagaagctt tgtcaatgct cataattttt taaaaattga aagaaaatgg gaaagagaaa
    15001 aatggtatgg cattgaattg atgaacaaaa cgctaggggt tataggtttt ggaaatatag
    15061 gttcaagagt ggctatccgc gctaaagcat ttggtatgaa aattttagcc tatgatccgt
    15121 atatttctgc ttctaagatt acagatttag atatggagca agcaaaaaat ttagatgaaa
    15181 ttttagaaaa aagtgatttt attaccattc acacaccaaa aaccaaagaa accaatggta
    15241 tgataggaaa gcaagaaatt gcaaaaatga aagatggaat aagattaata aattgtgctc
    15301 gtggaggatt gtacacagaa gaggctttat atgaaggttt aaaaagtggt aaaatagctt
    15361 ggcttggtat agacgtgttc gataaagaac ctgcgactaa tcatcctctt ttagactttg
    15421 aaaatatttc agttacttct cacctaggag caaatacttt agaaagtcaa gacaatatcg
    15481 caagagaagc ttgtgagcaa gcattaagcg cagcacgagg cgtggcttat cctaatgcct
    15541 taaatttacc aattaaaact gaagatttac caccttttgt agctccttat atagaacttg
    15601 tttctaaaat ggctttttta gctgttcaaa ttgataaaaa tcctataaaa agtattaaat
    15661 tagaggctga aggaattatt ggcgagtatg caaattctat gctaaccttt gcagctgttg
    15721 gtgctttggg tggaatttta ggagagaaaa ttaattatgt taatgcagaa tttgtagcca
    15781 aagaaaaagg agttgagtta tcttgcgaaa ctcttccaaa tagtggttat aataataaac
    15841 ttagcgttaa aattatcacc gaaaattcaa atatcagtgt ttcaggaaca gtatttaatg
    15901 aaaatgaaca acgcatagtt ggattaaatg gctttaaaac tgattttaag ccaaaaggga
    15961 aaatggttat ttttaaaaac aaagacatac caggagttat agctaaaatc agttccgttt
    16021 tggcagctaa aaatatcaac atagctgatt ttaggcttgg tagagatggt tttgggtatg
    16081 ctttggctgt tgttttgatt gatgaaaaag ttcaaaaaga agtattagat gaactaaaac
    16141 aattagaggc gtgtgtattt gtccaatatg ttgaaattta aaattttaat tatagaagat
    16201 gatatagatt taaacgaact gcttgtttta aagttaaaat ctagtggtta tgaagttata
    16261 tctttagcgg atttttttgg agttgaagat ttgctcgata atgagcaaat cgatctttta
    16321 atagtcgata gaaatttgcc aagtggggat tctttagaaa aaattcaaga tttaagagag
    16381 caaggataca aagaagcagt tatttttctt acagccaagg ctttgcatca agatttgctc
    16441 gaaggctttg aaagtggttg tgatgattat gtttgcaaac cttttgattt taatgagctt
    16501 ttgcttcgca ttaaagcaat tttaaaacgc cataagaaag aagaagaaaa gctatctttt
    16561 ggtgatttta ttttagattt ggctaattat gaattctttt acaaaaatca aaaattagaa
    16621 atctcaaatc ttgactatga gcttttaaaa tgtttttttg aaaatccaaa taccttgctt
    16681 actagacaat ttttaagcga aagtgtttgg aaagatgata ctacaagtga taaaacaatc
    16741 aatatagctc taacaagact tagaaataaa tttccaaaac taaaagatca tattataagt
    16801 gttaggggtg ttggctataa attatgctaa aaactaaaaa tatttttata gttttttttg
    16861 ttgtattggc tttgattttt gggtttattt tttatacttt tactaattct tatcttaatt
    16921 tcttgcttac aaaacaatat gaacaaaaaa tcaaaagcct tgatgatgtt ttaaaatttt
    16981 ctctcttaga gcatttaaat gatgccaata ttaaggattt tgctaaagat actagggctg
    17041 attttattat cctaaacaat gatatgaaaa taagttctgt aaaaaatcct gatttttttt
    17101 ctaatcttaa agaaggagaa attttaaatt tcaattcaaa aaaaattctt accaaaagc
//
LOCUS       DAPIYB010000033        17078 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.033, whole genome shotgun sequence.
ACCESSION   DAPIYB010000033 DAPIYB010000000
VERSION     DAPIYB010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17078)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17078)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17078
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.033"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            135..284
                     /locus_tag="RJ318_000849"
     CDS             135..284
                     /locus_tag="RJ318_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:sulfate symporter"
                     /protein_id="HDV7430736.1"
                     /translation="MEDNSWHFLGLFIAVIMAVILQVMPLGPVCMIAIAIVALSGITT
                     TQLKI"
     gene            445..588
                     /locus_tag="RJ318_000850"
     CDS             445..588
                     /locus_tag="RJ318_000850"
                     /inference="COORDINATES: protein motif:HMM:NF013132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7430737.1"
                     /translation="MKDALSGFSNSLIWLIVISIIVARGVIKTGLGEHLAYHFISILG
                     KKT"
     gene            591..842
                     /locus_tag="RJ318_000851"
     CDS             591..842
                     /locus_tag="RJ318_000851"
                     /inference="COORDINATES: protein motif:HMM:NF013132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7430738.1"
                     /translation="MAYSIAFCETILAPVTPSNTARAGAIINPIVQVIARSFKSTPED
                     GTQNKIGTYLSLVNYQEPILFHQLCLLQLQLQILWWLIL"
     gene            896..1120
                     /locus_tag="RJ318_000852"
     CDS             896..1120
                     /locus_tag="RJ318_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002888971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7430739.1"
                     /translation="MFLPGIAAMLSMPLMLYFLSPLEIKSTPNASTFAKDKLKELVKM
                     KNSEKIMLSVFVSLLLLWAGALGLFFWNFS"
     gene            1035..1298
                     /locus_tag="RJ318_000853"
     CDS             1035..1298
                     /locus_tag="RJ318_000853"
                     /inference="COORDINATES: protein motif:HMM:NF013132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7430740.1"
                     /translation="MKKSCSVFLSRFYFYGLELWACFFGISLDATSVALLGLSLVLIS
                     GVLTFGEVLAEKAAWNTLVWFSALVMMATLLGKLGVTQFLAEA"
     gene            1421..1666
                     /locus_tag="RJ318_000854"
     CDS             1421..1666
                     /locus_tag="RJ318_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002854233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDV7430741.1"
                     /translation="MFFIVQLALGAPPLFYAFIMIASGNVMMALTHYAIGTAPVIFGT
                     GCVTLKKWWSIGFVISIVDIVVMIAVELFWWKILGFY"
     gene            complement(1694..2710)
                     /gene="mnmA"
                     /locus_tag="RJ318_000855"
     CDS             complement(1694..2710)
                     /gene="mnmA"
                     /locus_tag="RJ318_000855"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDV7430742.1"
                     /translation="MKILVAMSGGVDSTVTAYKLKNLGHEVIGCYMKLHGKPNYHEEN
                     IKKVEKVANFLQIPYHILDLQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLL
                     EFAKSLGCEKLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKK
                     EDVKKFASTIEVLKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGEVLDSSGKVVGK
                     HEGYMHYTIGKRRGFEVRGAHEPHFVLKINPKQNQIIVGTKEELKISEFNLKNINLFI
                     DAKELVCEVKIRYRSKSTPCKVEIYEDKSAKITLKDPVYGLASGQMAVFYDHDKVIAS
                     GFIE"
     gene            complement(2710..3315)
                     /locus_tag="RJ318_000856"
     CDS             complement(2710..3315)
                     /locus_tag="RJ318_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HDV7430743.1"
                     /translation="MNEKISQDLEKFANIPNLKNAVTFFGSARLKEDNFYYQQAKILA
                     QKCVQNGFCVISGGGGGIMRAANEGAFSQKNNTNSMSSVGFNIFLPHEQKLNDFVEYN
                     ITFESLAIRKMALIEKSLAFVIFPGGFGTLDELCEILTLKQLEFKKDVPIILFGSEFW
                     RGFDEFVRNSLLKLEVISKGDELKYKITDDLDFIINTLKEI"
     gene            complement(3436..4224)
                     /locus_tag="RJ318_000857"
     CDS             complement(3436..4224)
                     /locus_tag="RJ318_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430744.1"
                     /translation="MINSLNSNLNYDYNTSNFKQDKNIDFKINKHGVAVITGEGALPY
                     RGKKFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSPLKDFNPAYTKWDP
                     TTEKMMLGFFVSYSKMFHLGYDIIKKADEFYKEFDALISKDLSLNEFKTKYIDFKQRY
                     DEFVKEYEMAMGDKMLLSSDDEIITQQSEKPFKAIQGESKNKETYKDDSTRNELVKKL
                     LEGKFSTSKELELLFGMKFSDDDAGEFNKILSLNSTPKSIDIKA"
     gene            complement(4238..4733)
                     /locus_tag="RJ318_000858"
                     /pseudo
     CDS             complement(4238..4733)
                     /locus_tag="RJ318_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779308.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5166..6021
                     /locus_tag="RJ318_000859"
                     /pseudo
     CDS             5166..6021
                     /locus_tag="RJ318_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343521.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            6006..6605
                     /locus_tag="RJ318_000860"
     CDS             6006..6605
                     /locus_tag="RJ318_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HDV7430745.1"
                     /translation="MEKILKILLFLPILALSTKAEWVVKSYQEIKNERVIRQTYEQSC
                     GASSLATLLNILDDQKKFDELELLKIMSGQELYTDMVSFVDLNDAVKKLGFQSNSYQI
                     NRENLDKLVNIPMLVKIEDDPRFPHFVIIINHKGNYLQVLDPSHGEYISSKSQFFSIW
                     DRYNKGGYALIVAPKKELKPFKLNTPKSLHFDFSPFSLF"
     gene            complement(6654..7496)
                     /gene="fliY"
                     /locus_tag="RJ318_000861"
     CDS             complement(6654..7496)
                     /gene="fliY"
                     /locus_tag="RJ318_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliY"
                     /protein_id="HDV7430746.1"
                     /translation="MINDFLKMFTNECISTIEGLTGKSAEFSEYKEFDVNTSDTLKAP
                     LVYAIFNIANGGKIGILAGAILMSAIGEWMMGEEEITKNDKLGPDEMDAAKEAIQNII
                     SAFSTTLGAQKDIPKMDFSIESCEFVPESVDFKDFKKLFLYDVKIGDLEEQVSLAMDQ
                     TLHNILSGKPAETGNTSTDSNHNTEEKAIMLSEELKNINLIMDVRLPVRVRIGNKKML
                     LKDVLTMDIGSVVELNQLANDPLEILIGDKRIAYGEVVIVDGNFGVQITEIGSKKERL
                     EQLR"
     gene            complement(7493..8572)
                     /gene="fliM"
                     /locus_tag="RJ318_000862"
     CDS             complement(7493..8572)
                     /gene="fliM"
                     /locus_tag="RJ318_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HDV7430747.1"
                     /translation="MAEILSQEEIDALLEVVDDNTDTPIASNSKDEKDERNIVVYDFK
                     RPNRVSKEQLRTIKGIHDKLARNLASQISSMMRSIVETKLHSVDQMTYGEFLMSLPSP
                     TSFNVFSIKPLDGNCVLEINPSIAFPMIDRLLGGQGDSYEASRELTDIELNLLDSILR
                     IIMQRLKESWATVTEIYPSIEAKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMVNIC
                     YPVVHLESILSRLANRDIMMGETSAKKSRNKELKTLIGRAEVVYEAILGKTLINVHEF
                     LELKQGDILRLDREADDKAIVSIDKKDVFLAQIGLHRFRKSIKILELIRTDKDEIKEI
                     LEKYEEERKAKASVYDEPEEEDEEI"
     gene            complement(8572..9264)
                     /locus_tag="RJ318_000863"
     CDS             complement(8572..9264)
                     /locus_tag="RJ318_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HDV7430748.1"
                     /translation="MLKEPPKAYAQMLKKEQDELVLSYMPALRAMAFRLKERLPSSID
                     VNDLISIGVEEMIKLSRRYDKEQNDNFWGFARKRVNGSMLDYLRSLDVMSRNNRKIIK
                     DIDAIMDEYFLEHECEPDDEYLAKKLDLDVEKIKEVRTAHAISYTLPIDEQIELYNED
                     NTLEKIEKEELLEKIHEVLDDLKERDQLIIQLYYYEELSLKEISEILQISESRISQIH
                     KKLLKKLRERLV"
     gene            complement(9245..9601)
                     /locus_tag="RJ318_000864"
     CDS             complement(9245..9601)
                     /locus_tag="RJ318_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430749.1"
                     /translation="MRPENYVAFFTVCGFFIGLAFSIISIDEAFDILIFTCFITFMFY
                     VFVHIAIMNFIDIKKISGRIFNKHDYEKTSNNIINDLVIREKKMDIILEKLNEEREEL
                     KKNEFKERRRNAKRAA"
     gene            complement(9620..10486)
                     /gene="flhG"
                     /locus_tag="RJ318_000865"
     CDS             complement(9620..10486)
                     /gene="flhG"
                     /locus_tag="RJ318_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis ATPase FlhG"
                     /protein_id="HDV7430750.1"
                     /translation="MNNQANKLRNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANL
                     ANVLANNGYKVGLFDADIGLANLDVILNVRIQKNLLHVLRGECSLEDILIEVKPNLWL
                     IPGESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVIV
                     VTVPDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPL
                     NLEFLGHLSASKDVSGSIKKRTLFSDENTASSDEIKALASKLLYRLERKVLDNVSNRS
                     FSSFFRKIIERF"
     gene            complement(10479..11933)
                     /gene="flhF"
                     /locus_tag="RJ318_000866"
     CDS             complement(10479..11933)
                     /gene="flhF"
                     /locus_tag="RJ318_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HDV7430751.1"
                     /translation="MGQLIHTFTVEDTEQIIPKVKEDYGDKALIITNKQIRPKTLNRS
                     ALYEVMVAIEESDYEEHLKKQGKSLPAKKSSPKPSSTSLAEEKIRSQIPQEDEDVVLD
                     FSNTRLNTNLNTVKNNDLAKKTYQDFPQNKINPHQNKTLGFDDFKEKLSEVSNEISKV
                     TNTPLENYTPNPNYNKKIENFEKQFEKQINKLNDKIDLLADMMWDDKAEARKNLMIPP
                     EFASIYKQAKESGMLENHLEAIMKATIENMPAAMKTNKDAVQRYFHSLLRNILPCRVE
                     SDIKKQKIMMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQY
                     AKMMKLPIIDSIEPKDLDEAIKSLNNCEVILVDTIGNSQYDQSKLAKTKEFLMHSNAE
                     IDVNLVVSANTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLVYETNIPLSF
                     FSIGQEVPDDLEVANSDFLVHCILEGFNKGKNNE"
     gene            complement(11943..12416)
                     /gene="folK"
                     /locus_tag="RJ318_000867"
     CDS             complement(11943..12416)
                     /gene="folK"
                     /locus_tag="RJ318_000867"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDV7430752.1"
                     /translation="MLKIQGVKHFEKSRFFPFFSQNIRSFKYLALIGLGSNIEPEKKR
                     FDMLFRVMMDDKRFKILSTSPMLINEAFGFKEQKDFTNAVMLIQTNLHARALLKVLLY
                     YEVKFKRKRTFKNAPRTLDLDLLYFSQKVKRDKWCEVPHKGAKERVSVILPLGMI"
     gene            complement(12419..12898)
                     /gene="aroQ"
                     /locus_tag="RJ318_000868"
     CDS             complement(12419..12898)
                     /gene="aroQ"
                     /locus_tag="RJ318_000868"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HDV7430753.1"
                     /translation="MKIMIIQGPNVNMLGVREVGIYGAMKMEEIHEQMKLAASQNNVE
                     LDFFQSNFEGEIVDKIQECLGTVDGIIINAAGYTHTSVAIRDAIAAVALPTIEVHISN
                     VYRREEFRQKSLIAPVCSGTIVGFGPFGYHLALMGIIQICEQIKNLRAMQQAQQTNK"
     gene            12989..14218
                     /locus_tag="RJ318_000869"
     CDS             12989..14218
                     /locus_tag="RJ318_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDV7430754.1"
                     /translation="MFIVAARYLFLCDEDFTILENQAFVFEDKILELGELDNLKKKYP
                     KAKIIKTPKNSVILPAFINPHTHLEFSANSTTLHFGEFLIWLKSVINSRSILNAQAKE
                     ELILQSIKKMQKSGIGTIGEISSFGSDLDPCLKASHKGMRIVFFNEILGTNENQVEDK
                     KQEFLKRFENSLKFKNDFFIPAISIHSPYSTHPSLAHFALDLAKKQNLLASTHFLESK
                     AENIWLRESKGGFKKWLENFTLHPKPLYTPKDFVKLFKGVRTLFTHCVYLKEYEWLDK
                     NLHSITHCAFSNRLLSQKSLDLKTALKSGLNIHLGTDGLSSNISLSLLDEMRANLLIH
                     KNFDLLELASKLLQMVTLYPARALNLNLGELKKGKIADFNVFELGECDKKQAPLQFIL
                     NAKEVDKLFIKGKECKF"
     gene            14206..15102
                     /gene="sppA"
                     /locus_tag="RJ318_000870"
     CDS             14206..15102
                     /gene="sppA"
                     /locus_tag="RJ318_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDV7430755.1"
                     /translation="MQILKSFFKALGCGIKFINTYFKTFVLLLIVIWILIPSANSSSN
                     LANLERIDLKGEIFDSSAVLEKIINAKNDSNIKGVLFVIDSPGGAFAPSMELALAIKD
                     LKIKKPVLVYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSGLANKLGI
                     KEQTIQAGEFKSAGTFARAWNENERNFLQGLIDQSYDLFTGFVAKERALDLNKKDQWA
                     NARVFLAAKAKELGLIDELSNYENAKKELEKLANVSNPVWKEEDKIDKFLNRLEGQTS
                     SLISKSLIEIAYKTNSSFINAR"
     gene            15181..16212
                     /locus_tag="RJ318_000871"
     CDS             15181..16212
                     /locus_tag="RJ318_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj0069 family protein"
                     /protein_id="HDV7430756.1"
                     /translation="MKKNIVFFEVKGGSDKGEDGYRKDTMPMVNALKAKGWNAEVIFF
                     EVGKKDEIYKYVKENFDGYVSRINPGNLKEENEYFDMLRKLCADKLVGMPHPDAMIGY
                     GAKDALTKLADTDLVPSDTYAYYDIKTFKENFPKSLAKGERVLKQNRGSTGEGIWRVS
                     VEGNVSGDSLPLNTKIKCTEAKDNHVEHRELGEFMDFCEQYIIGDNGMLVDMTFLPRI
                     KEGEIRLLMLYNTPVNVVHKKPAEDADAFSATLFSGAKYRYDKPEDWKTLVDMFLGEL
                     PKVREKLGNYDLPLIWTADFILDTDEKGNDKYVLGEINCSCVGFTSHLELADEVASNI
                     INIVSKTKA"
     gene            complement(16454..16804)
                     /locus_tag="RJ318_000872"
     CDS             complement(16454..16804)
                     /locus_tag="RJ318_000872"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430757.1"
                     /translation="MSYLIQNIKTTNDLKEKLYTVSKKWLLEHILYKDVKVEQYRRSS
                     LTSEDDGEVSFEEVKEEKDDENTVYLYTCECVEQMHDVPFGIHRKIQLKGVKFKCKKC
                     KEAIQFYKKYSENF"
     gene            complement(16780..17076)
                     /locus_tag="RJ318_000873"
     CDS             complement(16780..17076)
                     /locus_tag="RJ318_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HDV7430758.1"
                     /translation="MLLDKLIPTWNEKYSIHDTMIDIQHQKLCELASKVESAVYKFVK
                     REELKEILTELFNYMKEHFSNEEDYMQEIHYPYLNEHKIMHKISFVICLILYKT"
BASE COUNT         5395 a         2694 c         2599 g         6390 t
ORIGIN      
        1 taactagaat ttaagcattg taaattacat taccaatatc aaaggataaa caatggatag
       61 aaagaaaatt cccttgttgg tgctgtgtat tttaattgca actgtgtttt ggcctatacc
      121 tactccttgt aggtttggaa gataattctt ggcattttct tgggcttttt attgctgtga
      181 ttatggcagt gattttacaa gtaatgcctt tggggcctgt ttgtatgata gctattgcca
      241 tagtagctct tagtggcatt accactaccc aattgaaaat ctaagtaaaa tttacaccaa
      301 agctacttca aaaacttcta cgcaacaact tattgatgag actaaaattt cctttaaata
      361 cttcagtact tgatttttta tatcaaaaga gtataagatg aaaaggtaaa tactgctata
      421 tcaaatttaa aatctaaaac gggtataaaa gacgctttaa gtggtttttc aaattctctt
      481 atttggctta tagtgatttc tattattgtg gctcgtggag ttattaaaac aggacttgga
      541 gagcatttgg cttatcattt tatcagtatt cttggtaaaa aaacttaggt attgcttatt
      601 ctatagcttt ttgtgaaact attttagctc cagttactcc ttcaaatact gcaagagcag
      661 gggctatcat aaatcctata gttcaagtta ttgcaagaag ttttaaatcc actcctgaag
      721 atggaacaca aaataaaata ggcacttatc tttctttggt aaattatcaa gagccaatcc
      781 tatttcatca gctatgttta ttacagctac agctccaaat cctttggtgg ttgatcttat
      841 agcacaagct acaaatttag aagtgcattt aacttggggg taataggctt tagggatgtt
      901 tttacctggt atagctgcta tgctttcgat gcctttgatg ctttattttc tctctccgct
      961 agaaattaaa tccacgccta atgcttctac ttttgctaaa gataaattaa aagaacttgt
     1021 aaaaatgaaa aatagtgaaa aaatcatgct cagtgttttt gtctcgcttt tacttttatg
     1081 ggctggagct ttgggcttgt ttttttggaa tttctcttga tgcgactagt gtggctttgc
     1141 ttgggttgtc tttggtgttg attagtggag ttttaacttt tggggaagtt ttggctgaaa
     1201 aagctgcttg gaatacttta gtatggtttt cagctcttgt aatgatggca actttacttg
     1261 gcaaacttgg tgttacacag tttttagctg aagcttaagg tgaatttgct tctgctatgg
     1321 gacttgggga aatttctatt atgatatttt taagccttgc tttttttata tacacactat
     1381 ttctttgctt ctactacagc tcatatatca gcaatgtttt ttgtttttta tagtgcagct
     1441 tgccttagga gcaccaccac ttttttatgc ttttattatg atagcttcag gtaatgttat
     1501 gatggcatta actcactatg caataggaac agctcctgtt atttttggaa caggctgtgt
     1561 aactcttaaa aaatggtgga gtataggttt tgtgatttcc atagttgata tagtagtgat
     1621 gatagctgtt gagctttttt ggtggaaaat tttaggattt tattaataat ttctaggaat
     1681 taattcctag aaattattct ataaaaccgc ttgctatgac tttatcatga tcataaaaga
     1741 ctgccatttg tccgctagca agtccataaa caggatcttt tagagtgatt tttgcgcttt
     1801 tatcttcata aatttctacc ttacaaggtg tagattttga acgatagcgg atttttactt
     1861 cgcaaacaag ctctttagcg tctataaaaa gattgatatt ttttaggtta aattcactga
     1921 ttttaagttc ttctttggtt cctacgatga tttggttttg cttaggattg atttttaaaa
     1981 caaaatgtgg ttcatgtgcc ccacgcactt caaagcccct tcttttgcct atggtatagt
     2041 gcatatagcc ctcatgtttg cctaccactt ttccgctact atctaatact tctccaggaa
     2101 tttttgtatc cataaactga tctaaaactt gcacataagt atcttcaaca aagcaaattt
     2161 cagaactttc cttttgggtg gcaaaagatt ttaaaacctc tatagtggaa gcaaattttt
     2221 tcacatcttc ttttttcatt tcgcctagcg gaaaaataag atattttaaa gcttctttat
     2281 ctgcgctagc taaaaaatag ctttgatcct tgctttcatc tactgcggtt tttattaagt
     2341 tgttttcaag tcttgcataa tgccctgtgg caagtttttc acaacctaaa cttttagcaa
     2401 attctaaaag ttttccaagt ttgataaaac ggttacataa agcgcaagga tttggtgttt
     2461 taccctcttt ataagtatcc acaaaaggca tgtaaacttt gtttttaaaa tcttcttgta
     2521 agtctaaaat atgataagga atttgcaaaa agtttgcaac tttttctact tttttgatat
     2581 tttcttcgtg ataatttggt ttgccatgaa gtttcatata acaacctata acttcatgac
     2641 ctaaattttt aagtttataa gcagtgactg tactatcaac tccaccgctc atagcgacta
     2701 gaattttcat taaatttcct ttaaagtatt aattataaaa tccaagtcgt cagtgatttt
     2761 atactttaac tcatctcctt tagaaatcac ttcaagtttg agtaaagaat ttctgacgaa
     2821 ctcatcaaaa cctcgccaaa attcactccc aaacaaaata ataggaacat cttttttaaa
     2881 ttctaactgt tttaatgtaa gaatttcaca caattcatca agtgttccaa agccgcctgg
     2941 gaagatcaca aaagctagac tcttttcaat aagagccatt ttgcgtatgg ctaagctctc
     3001 aaaagtaata ttatattcta caaaatcatt aagtttttgc tcgtgaggta aaaatatatt
     3061 aaaccctaca gaactcattg aatttgtatt atttttttgt gaaaaagcac cttcgttggc
     3121 tgcacgcata ataccaccac ctccaccact tatcacacaa aaaccatttt gaacacattt
     3181 ttgtgccaaa attttagcct gctgataata aaaattatct tctttaagtc ttgctgaacc
     3241 aaaaaaagtt acggcatttt ttaggtttgg tatgttagca aatttttcta aatcttggct
     3301 tattttttca ttcatttttc aacctttagt taaaataaat tccattctag ctaaaaattt
     3361 ataataagtt ctttattata taagttttaa taggtttatt ttattaagat taggaattta
     3421 aagactttta aatccttaag ctttaatatc tatacttttt ggtgtagaat ttaaagaaag
     3481 gattttatta aattctcctg catcatcatc actaaatttc ataccaaaaa gaagttctaa
     3541 ttctttacta gtgctaaatt taccttctaa tagttttttt acaagttcgt ttcttgtgct
     3601 atcatctttg taagtttctt tgtttttact ttcgccttga atggctttga agggtttttc
     3661 actttgttga gtgataattt catcatcact agaaagcaac attttatcac ccatagccat
     3721 ttcgtattct ttcacaaatt catcgtatct ttgcttaaaa tctatgtatt tagttttaaa
     3781 ctcatttaag cttaaatctt tacttataag tgcgtcaaat tctttataaa attcatcggc
     3841 ttttttgatg atgtcgtagc ccaaatgaaa catcttagaa taagaaacaa aaaaacctaa
     3901 catcattttc tccgtagttg ggtcccattt tgtataagca ggattaaaat cttttaaagg
     3961 ggatttttct attttattgg ggtcttttaa agcatttgac ttcataaagt tgttaaattc
     4021 ttgcatatct tttttgctaa tactttcatc aagtccgaat attttaggat tatactcaaa
     4081 tttttttcca cgataaggca aagcaccttc tcctgttata acggctactc cgtgtttgtt
     4141 gattttaaaa tcaatatttt tatcttgttt aaaatttgaa gtgttataat catagtttaa
     4201 atttgagttt agactattta tcattagttt ttcctcttta cttgatagaa tacccaccaa
     4261 gatatctttc taaaaagtct ttatagtttg aactgatttc cttaactact ctgtaattat
     4321 tcaaagacag gacttgattt tactctatac caagaacctg attgttcgtt gattacagcc
     4381 actccataag aaaaatacac aaatcttttc cctaaattag aaataccaat atttcttttc
     4441 acagtatatc caagaaagtt acgataaggg tcatcgccca ctatactcat agtttcccaa
     4501 agtctttttt gattgatata ggaatgctta ccattaacca aacaatttgt agtttctata
     4561 ccgcacattc caccaaatcg aacaagtcct tctctattcc aataatattg atctccgtta
     4621 ctatcttgaa ataaagttaa ttccaaattc caatcaggtt tggcaaaggc tataacttca
     4681 ttatcactaa gtcgttttaa ataggttata tacccaccct tcacttcttt catctcttca
     4741 aggctgagtt ctttgacacc cgggcttgta tcgcttaagg caccttttgt gagtttagct
     4801 aaaaaatcct cagcaaaaca gaactagtca gtaaagaagt taaagctaat aaagcaaaaa
     4861 tctttttcat tgaaaatcct ttcataaatt ctttttgtaa gttctttaaa actactatcg
     4921 acttattcta gcaaaagttt aatcttgctt tgaaagttaa gtgaattttc tttaaatact
     4981 taaaatttta ttctcggttt gtttgctttt gtaacaaatt ttcattttta tcttaaatta
     5041 tattaagcaa gtaaaaatat ttaaagattt taaaatattt tatcttagaa taataaactt
     5101 ttcaatatca aggattaaat tttaaaatta acttgagctg attatttaaa atgtaaggat
     5161 tgacaatgaa aaaaattttc ttaacattta tggttttagt taattgtgtt tttgctagtg
     5221 atgagctaaa tatagacagt ttatttaaaa agcaaatagg cttaagaagc attataagct
     5281 tttctttact tagcacagga aatgcaaact cgtattctct ttatcctaat ataacaatag
     5341 gcggagatcc tacaatttgg aatgatacaa agcaggtgtt tttaactcaa actttcattt
     5401 ataccctaac acctaagttt gacatactta tttcaggggg gcggaagtta tgcaagacaa
     5461 gaatatacaa attttttcac aaatgcatat tcccataaag atcgcatagg atttgataat
     5521 ctatggctag gttttattta tacaggcgat agtattgcag atttaattcc acaaattacc
     5581 tttcaaactg cagttgttca aagagaaaaa gcaatcaatc aaaccaaaaa cttttatcta
     5641 aaatcacaaa gcttacaagc tagtttaagg ggatatagcg atcctgtagt ttatagtatt
     5701 tatacagggt ttggttataa tcaatcaaga aaatttaaaa cccttaaaat agagtatgga
     5761 aatagtattt atgtgggtgg ggatttatct attattctaa gtcctaaaat tactttagat
     5821 ttaggagcag agcaaagatt tcaaatgaaa caaaaaatca atggctatca aaattctgaa
     5881 gtgcgttcta ttccaacttt aagtttaggt tctacttata gcattaattc agataccgca
     5941 gtttctgtta atgctagttt tggaggaagc tctgcttctc ctgatagcat atttgggata
     6001 agcttatgga aaaaattcta aaaattttat tatttttacc cattcttgct ttgagtacaa
     6061 aagccgaatg ggtagttaag tcttatcaag aaattaaaaa cgaaagagta ataagacaaa
     6121 cttatgagca atcttgtggt gcttcatctt tagcaacttt acttaatata cttgatgatc
     6181 aaaaaaagtt tgatgaactt gaacttttaa agattatgag cggacaagaa ctttatacgg
     6241 atatggtaag ctttgtagat ttaaacgatg cagttaaaaa actgggcttt caaagcaatt
     6301 catatcaaat caatagagaa aacttggata aacttgtaaa tattccaatg cttgtaaaaa
     6361 ttgaagatga tccacgcttt ccacattttg ttataattat caatcataaa ggtaattatt
     6421 tacaagtgct tgatccaagc catggagaat atataagttc taaaagtcaa ttttttagta
     6481 tttgggatag atataataaa ggtggttatg ctttaattgt tgctcctaaa aaagagctaa
     6541 aaccttttaa gttaaacact ccaaaatctt tacattttga tttcagccct tttagtttgt
     6601 tttagtttta attcgtttat atttattatt cttaatttgt aggctaaaac tttttatctt
     6661 agttgttcta atctttcttt tttagaacca atttctgtaa tttgaacgcc gaagttacca
     6721 tcgacaatta ctacctcgcc ataagcaatt cttttatccc caattaaaat ttcaagcgga
     6781 tcgtttgcaa gttgattaag ctccacaact gaacctatat ccatagttaa aacatctttt
     6841 aaaagcattt ttttattgcc tatacgcaca cgaacaggca aacgcacatc catgataaga
     6901 ttgatatttt taagctcttc gctaagcatt atcgcttttt cttcagtatt gtgattagaa
     6961 tcagtgcttg tatttcctgt ttcagcaggt ttcccgctta ggatgttatg gagtgtttga
     7021 tccatggcta aagaaacttg ttcttctaaa tcgcctattt ttacatcata taaaaataat
     7081 tttttaaaat ctttaaaatc tacgctttca ggcacaaatt cacaagattc tatgctaaaa
     7141 tccatttttg gaatgtcttt ttgggctcct aaggttgtag aaaatgctga aatgatattt
     7201 tggatggctt ctttagctgc atccatttca tcaggaccta gtttatcgtt tttggtgatc
     7261 tcttcttcac ccatcatcca ttcaccaata gcactcatta aaatagcacc agctaaaatt
     7321 cctatttttc caccatttgc tatattaaat atagcataca ctaaaggtgc ttttaaagta
     7381 tcgcttgtat tgacatcaaa ttctttatat tcgctaaatt cagcactttt tcctgttaaa
     7441 ccttcaatgg tgctgatgca ttcatttgta aacattttta aaaaatcatt gatcatattt
     7501 cttcatcctc ctcttcaggc tcatcataaa cactagcttt agctttacgc tcttcttcgt
     7561 atttttccaa aatttctttg atttcatctt tatctgtgcg tataagttct aaaattttaa
     7621 tagattttct aaaacgatgc aatccaattt gtgctaagaa aacatctttt ttatcgatgc
     7681 ttactatagc tttatcatct gcttctctat caagtcttaa gatatcgcct tgtttaagtt
     7741 ctaaaaattc atgaacatta attaaggttt ttcctaaaat tgcctcatat accacttcag
     7801 cacgaccgat taaagtttta agttctttgt tgcgtgattt tttggctgag gtttcaccca
     7861 tcataatatc acggtttgct aaacggctta atatactttc taaatgtact acaggatagc
     7921 agatatttac cattccgctt gaatttccta tgatgatttc cattactacc atgataacaa
     7981 tctcattttg agatacgatt tgtacaacat ttggacttga ttctttagct tctatactag
     8041 gataaatttc agttacggta gcccagcttt ctttaagtct ttgcataatg atacgcaaaa
     8101 tagaatcaag caaattaagc tcaatatccg taagctcacg cgaagcttca tagctatcac
     8161 cttgtccgcc caaaagtcta tctatcatag gaaaagctat gcttggattg atttctaaaa
     8221 cacagtttcc atctaaaggt ttgatagaaa aaacgttaaa acttgttggg cttggcaaag
     8281 acattaaaaa ctctccataa gtcatctgat cgactgaatg aagtttagtt tcaacaatac
     8341 ttctcatcat cgatgaaatt tgagaggcta aatttcttgc taatttatca tgtatgcctt
     8401 taatcgtcct aagttgttct tttgaaactc tgtttggacg cttaaaatca tatacaacga
     8461 tatttctttc atctttttca tcttttgaat ttgaggctat gggtgtgtcg gtgttatcat
     8521 cgacaacttc aagtagagca tcaatttctt cttgggagag tatctcagcc attacactag
     8581 cctttctcta agttttttaa gaagtttttt gtgaatttgt gaaattctgc tttcactgat
     8641 ttgtaaaatt tcactgattt cttttaggct taattcttca taataataaa gctgaataat
     8701 taactgatcg cgctctttaa gatcatctag cacttcgtga attttttcta aaagttcttc
     8761 tttttcaatt ttttctaaag tattgtcttc attataaagt tcgatttgct catcaatggg
     8821 cagggtatag ctaatagcat gagctgttct tacttctttg attttttcta catctaaatc
     8881 aagttttttg gctagatact catcatcagg ttcgcattca tgttctaaaa aatattcatc
     8941 catgattgca tcaatatctt taataatttt acgattattt cgactcatta catcaagact
     9001 tctaagataa tcaagcatag agccgttaac tctttttctt gcaaaacccc agaagttatc
     9061 attttgttct ttatcgtaac ggcgtgaaag ctttatcatt tcttcaacgc ctatgctaat
     9121 aagatcatta acatctatac ttgaaggcaa gcgttctttt agtctaaaag ccatagcacg
     9181 cagagctggc atgtaagaaa gcacaagctc atcttgctct ttctttagca tttgtgcata
     9241 agctttaggc ggctctttta gcatttcttc gtctttcttt gaattcattt ttctttagct
     9301 cttctctttc ttcattgagc ttttctaaaa ttatatccat tttcttttca cgaataacta
     9361 aatcgttgat aatattattg ctagtttttt cataatcgtg tttattaaag attctgccac
     9421 taattttctt tatatctata aaattcataa tagcaatatg aacaaaaaca taaaacataa
     9481 aagtaataaa acaagtaaaa atcagtatat caaaggcttc atctatacta ataatgctaa
     9541 atgcaagtcc tataaaaaat ccacaaacag tgaaaaatgc tacgtaattt tctggcctca
     9601 taatctcttc tctttattgc taaaatcttt caataatttt tctaaaaaaa cttgaaaaac
     9661 tacgatttga aacattatca agcactttcc gttccaatct atataaaagc ttggaagcta
     9721 gggctttaat ctcatcactt gaggctgtgt tttcatcgct aaataaagtt ctttttttaa
     9781 tactaccact tacatcttta gaagcgctta aatgacctaa gaattctaaa tttaaaggat
     9841 ttttaatgtt tgcatctgca acttttttaa tattttcaaa aacttttaaa gcttcatttt
     9901 cattttttac aacattaaag agcattagta aattttcttt tgtcttagaa gttgttttta
     9961 tggttgcata cgcatcagtg attgctgcag gatcaggaac agttactact ataacttcat
    10021 cagccatttc taaaaaattt aaaatatttc caccaatacc cgcgcctgtg tcgataataa
    10081 gaaaatcaag ttcatctaaa atacttgctt gatttaaaaa tctctcgtaa atatttttat
    10141 cattatattt taaaatctca tctccacttt cgcctgggat gagccataaa tttggcttaa
    10201 cttctattaa aatgtcttcc aaggagcatt ctccgcgtaa aacatgcaag agattttttt
    10261 gtatgcgtac atttaaaatg acatccaaat ttgccaagcc aatatcagca tcaaaaagcc
    10321 caactttata gccattattt gctaaaacat tggctagatt cgcgctaatc gtactttttc
    10381 caacgccacc ttttccactt gtaatagcta taaaatgagt gttttgggat tttttggttc
    10441 cattttgact catgagattg cgaagtttat ttgcttggtt attcattatt ttttcctttg
    10501 ttaaaccctt ctaaaataca atgaactaga aaatcactat tggctacttc taaatcatct
    10561 ggcacttctt gtcctataga gaaaaagctt agaggaatat ttgtttcata aacaagagag
    10621 aagatatttc caaaaacctt tgtttcatca aatttagtaa taatcaaagt atcaatattt
    10681 aagaatgaaa aatttttata aatttccatt aaatcttcat gtttggtgtt tgcagaaacc
    10741 actaaattta catcaatttc tgcatttgag tgcattaaaa attctttagt tttagcaagt
    10801 ttgctttgat cgtattgtga atttcctata gtatcaacta aaattacttc gcaattattt
    10861 aagcttttta tcgcttcatc taaatccttt ggttctatgc tatcaataat aggaagtttc
    10921 atcatttttg catactgaaa aagttgctca actgcaccga ttctataagt atcaagcgta
    10981 ataatacctg ttttataacg cttatctcca taagcatagc gaaaagctaa cttagctaag
    11041 gttgttgttt ttccgactcc tgttgggcct actagcatca tgattttttg tttttttata
    11101 tcgctttcaa cacgacaagg caagatattt cttaaaagtg agtgaaaata tctttgaacc
    11161 gcatctttgt tggttttcat agcagctggc atattttcta tagttgcttt cataatcgct
    11221 tctagatgat tttcaagcat tccactttct ttggcttgtt tataaatact tgcaaattca
    11281 ggaggtatca taagattttt tctagcttca gctttatcgt cccacatcat atctgcaaga
    11341 agatctattt tatcattaag cttgttgatt tgtttttcaa attgcttttc aaaattttct
    11401 atttttttat tataatttgg attaggggtg taattttcta aaggtgtgtt tgtgacttta
    11461 gaaatttcat tgctaacttc acttagtttt tctttgaaat catcaaagcc tagagtctta
    11521 ttttgatgag ggttgatttt gttttgtgga aaatcttgat aggttttttt agctaagtca
    11581 ttgtttttta cagtgtttaa atttgtattt aagcgagtgt ttgagaaatc caagactaca
    11641 tcttcatctt cttgagggat ttgagatcta attttttctt ctgcaagaga ggtagaggat
    11701 ggttttggcg agcttttttt tgcaggtaaa gattttcctt gtttttttaa gtgttcttca
    11761 tagtcgcttt cttctatggc taccataacc tcataaagcg cactgcgatt taaggtttta
    11821 ggacgaattt gtttatttgt tataattaaa gctttatctc cgtaatcttc ttttactttg
    11881 ggtataattt gttctgtatc ttcaacggta aaagtatgta taagttgtcc catttatatt
    11941 ccttatatca tgcctaaagg caaaattaca ctcactcttt ctttagcccc tttatgaggc
    12001 acctcacacc acttatcacg cttgactttt tgtgaaaagt ataaaagatc taaatcaagc
    12061 gttctaggag cgtttttgaa agttctcttg cgtttaaatt ttacttcata gtaaagtaaa
    12121 actttcaaaa gtgctcgtgc atgcaaatta gtttgtatca acataacagc attggtaaaa
    12181 tctttttgct ctttaaaacc aaaggcttca tttatcaaca taggagatgt ggataaaatt
    12241 ttaaatcttt tatcatccat cattactcga aaaagcatat caaatctttt tttttcgggt
    12301 tctatattgc ttcctaagcc tataagagct aaatatttaa aagatcgtat attttgacta
    12361 aaaaaaggaa aaaaacgact tttttcaaag tgttttactc cttgaatttt tagcattatt
    12421 atttattcgt ttgttgtgct tgttgcattg cgcgcaaatt ttttatttgt tcgcaaattt
    12481 gaattatacc cattaaagcc aagtgatagc caaaaggacc aaaaccaaca atagttccag
    12541 aacatacagg cgctataaga cttttttgac gaaattcttc tctgcgataa acattgctaa
    12601 tatgtacttc aattgtaggc aaagctactg ctgcaatagc atcgcgaata gctactgaag
    12661 tatgagtata gcctgctgca ttgataataa ttccatcaac tgttccaagg cattcttgaa
    12721 ttttatctac gatttcacct tcaaaattac tttggaaaaa gtcaagttct acattgtttt
    12781 gcgatgctgc aagtttcatt tgctcatgaa tttcttccat tttcatagca ccataaattc
    12841 ccacttctct tacgccaagc atattaacat ttgggccttg gataatcatt attttcatgg
    12901 atttaacctt aaaaatttat ttttaacctt ttattataac attttaaaaa taaatttttg
    12961 ctacaatgta atttttgaaa ggaaaatcgt gtttatagtt gctgcaagat atcttttttt
    13021 atgcgatgaa gattttacaa tactagaaaa tcaagccttt gtttttgaag ataaaatttt
    13081 agaattgggt gaattggata atttaaaaaa aaaatatcct aaggctaaaa tcatcaaaac
    13141 acctaaaaat tcggttattt tacctgcttt tataaatcct cacacacatt tagaatttag
    13201 tgcaaattca acaactttac attttggaga atttttaatt tggcttaaaa gtgttataaa
    13261 ttctcgttcc atattaaatg cacaggccaa agaagaatta atacttcaaa gcattaaaaa
    13321 aatgcaaaaa agtggtatag gcactatagg tgaaatttca agttttggga gtgatttaga
    13381 tccttgctta aaggctagtc acaagggtat gcgtatagta ttttttaatg aaattttggg
    13441 tacaaatgaa aatcaagttg aagataaaaa acaagaattt ttaaaaagat ttgaaaattc
    13501 tttgaaattt aaaaatgatt tttttatccc ggcaatttcg attcattctc cttattcaac
    13561 tcatcctagt ttggctcatt ttgctcttga tttagctaaa aagcaaaatt tactagctag
    13621 tacgcatttt ttagaaagta aggctgaaaa tatctggctt agagagtcta aagggggttt
    13681 taaaaaatgg cttgaaaatt tcacacttca tcctaagcct ctttatacac caaaggattt
    13741 tgttaaactt tttaaaggag taaggactct ttttacgcat tgtgtttatc taaaagaata
    13801 tgaatggtta gataaaaatt tacattctat tacacattgt gcattttcaa atcgcctttt
    13861 aagtcaaaaa agcttagatt taaaaacggc tttaaaaagt ggattaaata tccatttagg
    13921 aaccgatgga cttagctcaa atatttcatt gtctttactt gatgaaatgc gcgcgaattt
    13981 gcttatacat aagaattttg atttattaga gttagcctct aagcttttgc aaatggtaac
    14041 actttatcct gcaagggctt taaatttaaa tttaggagag cttaaaaaag gtaaaattgc
    14101 tgattttaac gtatttgagc taggagaatg tgataaaaag caagctcctt tgcagtttat
    14161 tttaaatgct aaggaagtgg ataaattatt tataaaagga aaagaatgca aattttaaaa
    14221 tcatttttta aggctttagg atgcggtata aaatttatca atacttattt taaaaccttt
    14281 gttttattgt tgattgttat atggatttta atacctagtg caaattcaag ctctaatctt
    14341 gcaaatttag aacgcattga tttaaagggt gaaatttttg acagctctgc ggttttggaa
    14401 aaaattatca atgctaaaaa tgatagcaat atcaaaggag tgctttttgt tatagactct
    14461 cctggtggag cttttgctcc tagcatggaa ctagctctag ctataaagga tttaaaaatt
    14521 aaaaagcctg tgcttgttta tgcaagcgga actatggcaa gtggaagtta tttagcagga
    14581 gttggagcaa ataaaatttt agccaatccg gcaagtttta taggctctat cggtgtgatt
    14641 atgcaaggag ctgatttaag cggattggct aataaactcg gtattaaaga acaaactatt
    14701 caagcgggtg aatttaaaag tgctggaact tttgcaagag cttggaatga gaatgaaaga
    14761 aattttttac agggtttaat tgatcaaagt tatgatcttt ttacaggttt tgttgccaag
    14821 gaaagagcat tagatcttaa caaaaaagat caatgggcaa atgcaagagt gtttttagct
    14881 gccaaggcta aggagcttgg tcttatagat gagcttagta attatgaaaa tgctaaaaag
    14941 gagcttgaaa aacttgctaa tgtttcaaat cctgtttgga aagaagaaga taagattgat
    15001 aaatttctta accgcctaga aggacaaaca tcaagcttga taagtaaaag cttaatcgaa
    15061 atcgcttata aaactaatag cagttttata aacgctagat aaaatatata aatattttta
    15121 tttaattttt gtaatatttt tatgcaataa ttatttatat cttagataag gagtaaaata
    15181 atgaaaaaaa atattgtttt tttcgaagtt aaaggtggga gtgataaagg tgaagatggc
    15241 tatagaaaag ataccatgcc tatggtaaat gccttaaaag ctaagggttg gaatgctgag
    15301 gtgatttttt ttgaagtggg taaaaaagat gaaatttaca aatatgtgaa agaaaatttt
    15361 gatggttatg tttctcgcat caatcctggc aatcttaaag aagaaaatga gtattttgat
    15421 atgttaagaa aactttgtgc cgataagctt gtaggtatgc ctcatcctga tgctatgata
    15481 ggttatggtg ctaaagatgc acttacaaaa ttagcagata ctgatcttgt tccaagcgat
    15541 acttatgctt actatgatat taagactttt aaagaaaatt ttccaaaaag tttggctaaa
    15601 ggtgaaaggg ttttaaaaca aaatcgtggc tctacaggag agggaatttg gcgtgtgagt
    15661 gtagagggta atgttagtgg agatagtttg cctttaaaca caaaaatcaa atgtacagaa
    15721 gctaaggata atcatgtaga acatagagag cttggggaat ttatggattt ttgcgagcaa
    15781 tatatcatag gtgataatgg tatgcttgtg gatatgactt ttttaccgcg cattaaagaa
    15841 ggtgaaatca gacttttaat gctttataac acccctgtaa atgtagtgca taaaaaacca
    15901 gccgaagatg ctgatgcttt ttctgctacg ctttttagtg gggcaaaata tcgctatgat
    15961 aagccagaag attggaaaac tttggtggat atgtttttag gcgagcttcc taaggtaagg
    16021 gaaaaattag gcaattacga cttaccattg atttggacgg ctgattttat tttagatact
    16081 gatgaaaagg gcaatgataa atatgtttta ggcgagatta attgttcttg tgtaggtttt
    16141 acttctcatt tagaacttgc tgatgaagta gcttcaaata ttattaatat tgtaagtaaa
    16201 actaaggctt agtctttaag cttaatgtcc attttattat tgtaaaatgg acattctttt
    16261 tctattgttt ttaagtttga gctatattct atcgagaaaa aattttcaca aaatgagcat
    16321 tttgtatctt tggttagtat aggataggaa tagtcaaatt tatccaaaat aaaatatttt
    16381 atttttttat ccttaaattt ccttctttgt ctaacttata ctttatttat tattttaacg
    16441 cataaatagt taattagaaa ttttctgaat attttttata aaactgtatg gcttctttgc
    16501 attttttaca tttaaatttt acgcccttaa gttgaatttt tcgatgaatt ccaaatggta
    16561 catcatgcat ttgttctacg cattcgcatg tataaagata aactgtattt tcatcatctt
    16621 tttcttcttt gacttcttca aagcttactt ccccatcatc ttcagaagtt aaagaagatc
    16681 ttctgtattg ttcaactttc acatctttat agagtatatg ttctaaaagc cattttttag
    16741 aaactgtgta aagcttctct tttaaatcat tagtggtttt tatgttttgt ataagataag
    16801 acatatcacg aatgatattt tatgcatgat tttgtgttca tttaaataag gataatgaat
    16861 ttcttgcata taatcttctt cattactaaa atgttctttc atatagttaa aaagttctgt
    16921 taaaatttct ttgagttctt ctcgttttac aaatttataa acagcacttt caaccttgct
    16981 tgcaagttca caaagttttt ggtgttgaat gtcaatcatt gtgtcatgaa tactgtattt
    17041 ttcattccaa gttggaatta gtttatctaa aagcacct
//
LOCUS       DAPIYB010000034        16957 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.034, whole genome shotgun sequence.
ACCESSION   DAPIYB010000034 DAPIYB010000000
VERSION     DAPIYB010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16957
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.034"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            134..1915
                     /locus_tag="RJ318_000874"
     CDS             134..1915
                     /locus_tag="RJ318_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoX family phosphatase"
                     /protein_id="HDV7430759.1"
                     /translation="MERRLFLKGSALGSMVAFFASSNLSAVILKDKDLLGFKAVSAST
                     QDKVIVPQGYEAKVLISWGDPLFSKAKPYDENKIIDMNAIKNAHLVFGDNDDGMSFFP
                     LSKNRGILAVNNEYINPEIMFNHHGKNLSKEDVLYEQASVGVSILEIEKKGDDWTVVL
                     DSKYNRRIDANTKMQVSGAAKKEVLKNEKFVHGTFANCANGQTPWGTYITCEENFDDF
                     FGSSDENLEFNDAFKRYGFNKTSLYGWEKFDERFDLAKNIDEANRFGWIVEINPFDAK
                     STPVKRTSLGRFKHENAEIIVEKDGSVIVYMGDDEMNEFIYKFVSKHKYKKGADTSKI
                     LDEGTLYVGQFNGKVGDFKGQGKWIALEYGKNGLDEKNGFKSQAQVLINTRLAASIVG
                     ATPMDRCEWIASHKQSGSKEVFATLTNNKNRQEPNAANPRTKNVYGQILKWMPKNSHK
                     DDDFTWEIFALAGNPDNQQGLYKGSNNITSENKFNSPDGLKFDRDGRLWIQTDGSYSN
                     KDEYEGMGNNCMLAANPKTGEIRRFLTGPIACELTGIAFSEDYTTMFVGIQHPGEGLK
                     GSTFPYGKTPRSSVIMIRKLDGGVIGS"
     gene            complement(1953..2891)
                     /gene="trxB"
                     /locus_tag="RJ318_000875"
     CDS             complement(1953..2891)
                     /gene="trxB"
                     /locus_tag="RJ318_000875"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDV7430760.1"
                     /translation="MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSS
                     EIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTE
                     LAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEA
                     LYLANICSKIYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKV
                     KLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGL
                     FAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESLH"
     gene            complement(3025..3339)
                     /gene="trxA"
                     /locus_tag="RJ318_000876"
     CDS             complement(3025..3339)
                     /gene="trxA"
                     /locus_tag="RJ318_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDV7430761.1"
                     /translation="MGKYIELTSDNFAQAKEGVALVDFWAPWCGPCRMLAPVIDELAN
                     DFDGKAKICKVNTDEQGDLAAEFGVRSIPTLIFFKNGEVVDQLVGAQSKQAISDKLNS
                     LL"
     gene            complement(3396..3734)
                     /locus_tag="RJ318_000877"
     CDS             complement(3396..3734)
                     /locus_tag="RJ318_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDV7430762.1"
                     /translation="MGLKAYLDGILGEDKACKFLKKQGFEILKRNFYSKFGEIDIIAK
                     KDEILHFIEVKFTQDDYEVSERLDRKKLEKILKTIEFYHLKNGISSDFQIDLICIKND
                     VIQFCENISF"
     gene            complement(3734..4981)
                     /locus_tag="RJ318_000878"
     CDS             complement(3734..4981)
                     /locus_tag="RJ318_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HDV7430763.1"
                     /translation="MKVAILGYGTVGSAVVKFLLENDKLIRARCGQSITPVIALARSP
                     KKNALIPITHSVAEILNADVDVFVELMGGVDEAFKIVSEILKKKKAVVTANKAMLAYH
                     RYELENLAKNLAFGYEASVAGGIPIIKVLKEGLSANNILAIKGILNGTSNYILSSMSQ
                     KNMSFKQALQIAQNLGYAEADPTFDIEGQDAAHKLLVLSSIAYNLKAKPEDILIEGIS
                     EIAPEDMYFANEFEFTIKLLGIAKVRENKVELRVHPTMIDKEKMLAKVDGVMNAISIN
                     GDLLGESLYYGAGAGGEATASAVISDLMDIARDQVKAPMLGFVNTLEYKLLSKDEIYT
                     KYYLRVKVEDKIGILSKITQLMSENNISIDSFLQKPKKNDENYSTLFFTTHLTYEKSI
                     QNLLEILRKQDFIKTKPFMMRIE"
     gene            complement(4985..6187)
                     /locus_tag="RJ318_000879"
     CDS             complement(4985..6187)
                     /locus_tag="RJ318_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HDV7430764.1"
                     /translation="MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPN
                     GKTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAICNWYKRKYNVNLDPENEVVATM
                     GSKEGFVNLARAIINPGDVAIVPTPAYPIHTQAFIIAGGNVAKMPLAYNEKFELDENQ
                     FFENLHKTLNESIPRPKYVVVNFPHNPTTVTCEKSFYERLIATAKKERFYIISDIAYA
                     DLTYDDYKTPSILEIEGAKDIAVETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSW
                     FDYGMYTPIQVGATIALDGDQTCVDEIRATYDKRMHILLEAFENAGWKLQKPRASMFV
                     WAKLPESKRHLKSLEFSKQLLQRASVAVSPGVGFGEAGDEYVRIALIENENRIRQAAR
                     NIKKYLKE"
     gene            complement(6199..7005)
                     /locus_tag="RJ318_000880"
     CDS             complement(6199..7005)
                     /locus_tag="RJ318_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430765.1"
                     /translation="MVKKIIILTFWVNISFAISSLELAKNLVNNPSKNSQLELLFSNN
                     SYIDNNGNYDIAKISQILKTNSLIALTLSNPQSLRLNFKAKADEVMFFKILSDVLTDA
                     GYIYFIPTDLILREGNIDYTIQVESQYVLDPGTLYNLLKENSVYINNIKRIGVYDYEY
                     DLNFSNAVLKTNTNVNLNTPKSLEKPLKDYVLDLKNATNLIIDANDLDNWFPKIFFLD
                     KNLNLIKAVKSENKNNHFSELIPNGAIYAIVSDMYSLDNIRRGLKITLKK"
     gene            complement(6999..7937)
                     /locus_tag="RJ318_000881"
     CDS             complement(6999..7937)
                     /locus_tag="RJ318_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430766.1"
                     /translation="MLNWKKIQELNLKEVAAKTQIELDFLEALVEKNFAVLSRFNVKG
                     FVKILSREYELDFSDFNEEYEAYLNENNPTPQTKSKMITPKLDAYSQKSFNTWPFLIV
                     LIVLVIIGSGIYYFNTLKTFFKDEQNNTSATVIDIIGQAQENLKSLGGNNVVVIDNNK
                     AQETNRTESVLPSQNISLQENDKNISIENNISENNTTLLDEEKNTQIQEDTNTPKTDS
                     LKEAHFKTSTKIWIGLIDLKSLKKTSFVKEKDFNISLDKDQLILTGAAALTMFDQENK
                     EQKFPAGISKRFLIKDGKITSISAAEFVKLNKGKEW"
     gene            complement(7930..8613)
                     /gene="rlmB"
                     /locus_tag="RJ318_000882"
     CDS             complement(7930..8613)
                     /gene="rlmB"
                     /locus_tag="RJ318_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDV7430767.1"
                     /translation="MIVYGKQIFFYILEYHKDCINELYLAKECDKITFSKIAKSGFKI
                     KKLDFKTAQAYAKGGNHQGFLLDIKESSFANLNEIKKNDFIVMLYGISDVGNIGAITR
                     TAYALGVGALIFIGEKLAMEGVIRTSSGAALDLPIVISNDALSVINELKQVGFYFYAS
                     DGSGKEIHSVKISNGKKVLVLGSEGFGLSSKIVKKCDECVGIAMKNNFDSLNVSAAFA
                     ILCDRMLNA"
     gene            complement(8627..9451)
                     /gene="rsmI"
                     /locus_tag="RJ318_000883"
     CDS             complement(8627..9451)
                     /gene="rsmI"
                     /locus_tag="RJ318_000883"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDV7430768.1"
                     /translation="MLYFIPTPIGNLSDISFRALELLKTCDLVFCEDTRVSKSLISLL
                     NTKFHTDIHISKFIALHSHNEKEVLASIDLKIFEKNVAYLSDAGMPGISDPGKALVEF
                     AQENNITYEILPGANAALVALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNFPYPS
                     IIYESPKRILSLVEQIMILDNQREIFLIKEISKKFEKKFKGNAKELSEILKKSNLNGE
                     WVVVLQSKEQNFLQNTLCEKDIMDLELSLKAKAKLLSKINGKNAKEIYQKLLLSQD"
     gene            complement(9454..9654)
                     /gene="rpmE"
                     /locus_tag="RJ318_000884"
     CDS             complement(9454..9654)
                     /gene="rpmE"
                     /locus_tag="RJ318_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HDV7430769.1"
                     /translation="MKKEIHPEYVECKVSCACGNTFTTKSNKAELRVDICSNCHPFFT
                     GSEKIVDAAGRVEKFKKKYAMQ"
     gene            complement(9733..10389)
                     /locus_tag="RJ318_000885"
     CDS             complement(9733..10389)
                     /locus_tag="RJ318_000885"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDV7430770.1"
                     /translation="MQFLYNKQAGEEFIQLQGENFNHLKVRRVKENSELNLRNLQDNF
                     LYNYTITNLTRNSCTLKFLNKKSQNIKQSELNLALAIIDIKILEKTLPFLNELGVKKL
                     HLVFTNFSQRNFKIDLERFEKIIISSCEQCGRNTKMDLIIHQSTQEFVQKFPNAIMVD
                     FQGEQQSHFDEKELYFIGPEGGFNNDERLLFNRKISLKSSNILKSQTAIIAIASKILL
                     "
     gene            complement(10391..10798)
                     /locus_tag="RJ318_000886"
     CDS             complement(10391..10798)
                     /locus_tag="RJ318_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430771.1"
                     /translation="MDQSYEFFLALHLYSLYASGFLMLFYLILTQGNFKTEFIFIRRI
                     RLFLPIYYLFLALIIFTGCLLSAMKQFQMNVNIWVMIFSWILIFALAIFHFVCFKKAR
                     RFRKYATFRWISCLILPFEIFLLFLPFLIERYL"
     gene            complement(10798..11223)
                     /locus_tag="RJ318_000887"
     CDS             complement(10798..11223)
                     /locus_tag="RJ318_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDV7430772.1"
                     /translation="MQKAKILIALSFFLLVLSACSNDEKNISKTQNTDQEVVQIEQND
                     EKTELSDSNLPLPVDDEAQSSNDEHEVNPSIINSLYKQKCATCHGEKGELKPKNSTAI
                     KTLSNKIFIQKIKTIKDKNHSFLSDEQIQNLADFINKGK"
     gene            complement(11223..11804)
                     /locus_tag="RJ318_000888"
     CDS             complement(11223..11804)
                     /locus_tag="RJ318_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HDV7430773.1"
                     /translation="MIIRKLFEFENAHIVRFCSSKRCKSSIHGHSYKVEVLLESKYLD
                     NAGMVYDFGLLKTYIRQIIDSFDHAITLFKYDDAKYLEEMKKYSSRWICLPVNVSAEN
                     FCRVFFILIDALLKQTKMVNGEQGVTLQSIIVHETRTGYAQGFREDAYSELMPKISLQ
                     DIEFSNGIKAEWNDIDFYNKLKNEEIFINPKEI"
     gene            complement(11801..12544)
                     /locus_tag="RJ318_000889"
     CDS             complement(11801..12544)
                     /locus_tag="RJ318_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDV7430774.1"
                     /translation="MQLVESFLSIQGEGKYNGKLAIFMRFAGCNFNCLGFNVKISKND
                     KTLIGCDTIRAVFTKDFKESYETLNANELLKRVIKLKKDFDPIVVITGGEPLIHYENP
                     EFIEFIQMLLKNKFEIHFESNGSIEIDFDRYPFYKECIFALSVKLQNSGIKKDKRLNF
                     KALKAFKNYAKDSFYKFVLDANTLDNSFLEINEILKEAPNQIFCMPMGENEQNLKKNA
                     QKIAEFCIKNGYNYSDRIHIRLWNDKEGV"
     gene            complement(12547..13509)
                     /gene="moaA"
                     /locus_tag="RJ318_000890"
     CDS             complement(12547..13509)
                     /gene="moaA"
                     /locus_tag="RJ318_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDV7430775.1"
                     /translation="MLIDQFGRKINYLRISVTQRCNFRCLYCMPKIPFDYQPKENLLS
                     FEELFLFVKAAIDEGIEKIRITGGEPLLRKDLSIFIKMISDYKSDIDLAITTNGFLLK
                     DFAKDLKNAGLKRLNISLDTLDHKKAKTLAQKDVLDSVLSGIDEALNLDLKVKLNTVA
                     LKNLNDDELISLLEFAKSKKAQIRFIEFMENTHAYGKLQGLKRDEIIQILSQKYQIQL
                     IKKDEKAPVSIYKADDYEFGIIDPHSHEFCDSCNRIRLSAEGLLIPCLYFDEALSIKE
                     AVRKGDIKAAVEILQEVLRNKPEKNKWSVVDNETSSRAFYQTGG"
     gene            complement(13522..14037)
                     /locus_tag="RJ318_000891"
     CDS             complement(13522..14037)
                     /locus_tag="RJ318_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430776.1"
                     /translation="MSDDVLYLVFIIVLLIAMLAYMNIKERENNAKIAKLQNVIEDIT
                     KELHYFRKELGVKDDSEEDEDYKTSLLKEEIMIELDKQISSKITPVLRTLKTMEHIIE
                     DFQNEQQNRLLNLEQKAQSMAKLTPNYDTEEQKIENLFKEGKSIEQIAKDLRIGTGNV
                     ELVLKFKKLIK"
     gene            complement(14034..14531)
                     /locus_tag="RJ318_000892"
     CDS             complement(14034..14531)
                     /locus_tag="RJ318_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430777.1"
                     /translation="MELALFKAGFEAHLECCEIENNRFLGEYLKLGAISQILKWKKLA
                     LRIDFDEGEKIIFDLLLSLKEDILRLENSLDKNKELIPLKQKGVIESLNFEYLNFLDT
                     ILEEDKEYYLRFDLNNQKIAIFIKAQSQTLAKIIKIKPEDKMAFDAFVVEIQRNMIRN
                     KKGQE"
     gene            complement(14522..15406)
                     /locus_tag="RJ318_000893"
     CDS             complement(14522..15406)
                     /locus_tag="RJ318_000893"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate polyprenyltransferase"
                     /protein_id="HDV7430778.1"
                     /translation="MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLANDTAWF
                     GFKALILGIICAVSARNFAMATNRLMDEDIDKDNPRCANRPNVSGKIGRKSVWIFIII
                     NALIFISCSYFINTLAFYLSFPVLLVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVI
                     IMGEIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKIGLHSIPAKFGSKATLFISSF
                     CHILAVLFWLLFVWEVWGVALGKIALIGVIISGIILALEHKIVHKNFAHIDRAFFTLN
                     GYLSIIFFIFIWIDLLWN"
     gene            15477..16346
                     /gene="miaA"
                     /locus_tag="RJ318_000894"
     CDS             15477..16346
                     /gene="miaA"
                     /locus_tag="RJ318_000894"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDV7430779.1"
                     /translation="MFFEIALIGTTASGKTYIANTLAREFNAVVLSLDSLCVYKEINI
                     ASAKPSQDDLASIKYFGVNLLSVNEHFNVELFIREYQKAKEFALARNLPLIIVGGTGF
                     YLKTMIDGLSEKTLESKSSLNNDEIYALLLNIDPNYKIEKNDTYRLKKWLGIYEQTRE
                     IPSEFLKRTQKTGVLKDIEIYELAWDKEILKKRIKTRTKEMLDNGLLDEAKILFSKFD
                     HKLKALNSIGLKECKEYLDGEISFKELENLITIHTTQLAKRQRTFNKKFQSKALEFDK
                     ALATLRMKFSIEK"
     gene            complement(16332..16895)
                     /locus_tag="RJ318_000895"
     CDS             complement(16332..16895)
                     /locus_tag="RJ318_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HDV7430780.1"
                     /translation="MDFYSLIFLSCALGMDAFAVSLCKGFSVKKLHLKHYLIVGIYFG
                     GFQALMPTIGYFIGITFASFIASIDHWIAFILLSLIGLKMIKESLENENCDSNANQFG
                     FKTMLALAIATSIDALAVGVSFAFLNVNLLLAIFLIGIITFILCIIALKIGNKFGIYL
                     KNKAELLGGLVLIILGVKILIEHLFFD"
BASE COUNT         5827 a         2707 c         2235 g         6188 t
ORIGIN      
        1 taatcattta tacctagtaa aaaactaggt ataaattttt ccttcaattt aaatttttca
       61 tcaaagtttc taaaaagttt ccaaatattt ttatacttcc attgttttaa atttcaatat
      121 ggggtaaaaa caaatggaaa gaagattatt tttaaaaggt tcagctttag gttctatggt
      181 ggcttttttt gcaagttcaa atttaagtgc tgttatactt aaggataagg atttgttagg
      241 ttttaaagct gttagtgcaa gcacacaaga taaagttata gtaccgcaag gttatgaagc
      301 aaaggtttta atttcttggg gtgatccact ttttagtaaa gcaaaacctt atgatgaaaa
      361 taaaatcatc gatatgaatg caattaaaaa tgctcatttg gtttttggag ataacgatga
      421 tggtatgagt ttttttccac tttcaaaaaa cagaggaatt ttagctgtta ataatgaata
      481 tataaatcct gaaatcatgt ttaatcatca tggtaaaaat ttaagcaaag aagatgtttt
      541 atacgagcaa gccagtgtgg gtgtgagtat cttagaaatc gaaaaaaagg gtgatgattg
      601 gactgtggtt ttagactcta agtataatcg cagaatcgat gcaaacacta aaatgcaagt
      661 aagtggagca gctaaaaaag aagttttaaa aaatgaaaaa tttgttcatg gaacttttgc
      721 aaattgtgca aatggacaaa caccttgggg aacttatatc acctgtgaag aaaattttga
      781 cgattttttt ggaagttcag atgaaaatct agaatttaat gatgccttta agcgctatgg
      841 atttaacaaa actagtcttt atggatggga aaaatttgat gaaagatttg atttagctaa
      901 aaatatcgat gaagccaatc gttttggttg gatagtggaa atcaatcctt ttgatgcaaa
      961 aagcacacct gttaaaagaa cttctttagg gcgttttaaa catgaaaacg cagaaattat
     1021 cgtagaaaaa gatggttctg ttatagttta tatgggtgat gatgagatga atgaatttat
     1081 ttataaattt gttagcaaac ataaatacaa aaaaggtgct gatacaagta aaattttaga
     1141 tgaaggcact ttgtatgtag gacagtttaa cggcaaggtg ggagatttta aaggacaggg
     1201 aaaatggata gctttagaat atggcaaaaa cggcctagat gaaaaaaatg gttttaagtc
     1261 tcaagctcaa gtactcatca atacgcgtct tgctgcaagt attgtaggtg caactcctat
     1321 ggatagatgt gaatggatag caagccataa acaaagtggt tctaaagaag tatttgcaac
     1381 actaacgaac aacaaaaatc gccaagaacc taatgcagca aatccaagga ctaaaaatgt
     1441 ttatggacaa attttaaaat ggatgccaaa aaattctcat aaagacgatg attttacttg
     1501 ggaaattttt gctcttgctg gaaatcctga taaccaacaa ggcttatata aaggctcaaa
     1561 taatattaca agtgaaaata aattcaattc tcctgatgga cttaaatttg atagagatgg
     1621 aagactttgg atacaaacag atggatctta ttctaataaa gatgaatacg aaggtatggg
     1681 aaataactgc atgctagcag caaatccaaa aacaggggaa atcagacgct ttttaacagg
     1741 gcctattgct tgtgaattaa cagggattgc ttttagtgag gattatacta caatgtttgt
     1801 aggcatacaa catccaggag aaggtttaaa aggtagtact tttccttatg gaaaaacacc
     1861 aagatcgagt gtaataatga taagaaaact tgatggtgga gtgataggaa gctaaataaa
     1921 aataaagttg cttttagcaa ctttataaaa tcttaatgca agctttctat ataagccata
     1981 gcacttaatg cagctacagc tccatcacct gcagcacaaa taacttgctt aggcgcatct
     2041 tttctaaggt cccctgcggc aaaaagtcca gcaacgctag tttgcatttt aagatcaaca
     2101 cttacttgcc caccttcttc catattgcat aaaaacttac tatcgtcttg ttttaaaatt
     2161 tcatttctta cgttaagacc aacaaaagta aaaattcctg gaacatttaa atctctaata
     2221 ctaccatctt ttaattttac ttttactcca gcaacaccca ttttatcgcc atatacttca
     2281 tctacacttg cgctagtaat gagttctatt ttttcgtttt tcttaacttt ttctactgta
     2341 gatggagctg ctctaaactc atctctgcgg tggataagat aaatcttaga acaaatattt
     2401 gctagatata aagcttcttc taaagccgta tctccaccac ctaaaactgc aacttcttta
     2461 tttttataaa aaaatccatc acaagttgca caagtgctta caccttttcc aaaaaattca
     2521 tcttcgccct taaaacctgc tttttttgga gctgagcctg tacaaactat cacagcttta
     2581 gcaagttctg ttttaccacc ttctaatttg atggtaaaac ttccatcact attttttaaa
     2641 atttgttcta ctccaaccat ttcatgtttt aaaccaaaac gcatacattg ttcactccaa
     2701 ggagccataa aagaaattcc atccataact tgggctacac ctggataatt ttctatctca
     2761 gaacttgagg taatttgtcc accaggcata cctttttcaa acattactac atttttaagg
     2821 ccacctctag ttgcataaag tccggcacta agtccagcag gacctccacc tatgattgct
     2881 acatctaaca tttatatttc ctttatattg aattttatta ttaataatga tataaaaatt
     2941 attcttaata gtagttaata aaaattatta tttagtataa atttgaaatt tttaagaaga
     3001 aggctagtta tactagcctt tagtttatag taaagagttt aatttatcgc taattgcttg
     3061 tttagattgt gcaccaacga gttgatctac aacttcacca tttttaaaga aaataagcgt
     3121 aggaatagag cgaacaccaa attcagctgc taaatcacct tgttcatctg tatttacttt
     3181 gcaaatttta gctttaccat cgaagtcatt tgcaagttca tcaataactg gagcaagcat
     3241 tctacaaggt ccgcaccatg gagcccaaaa atcaactaaa gctacacctt cttttgcttg
     3301 agcaaaatta tcacttgtta attcaatata ttttcccata atttttcctt tctttaattt
     3361 ttgtctaatt gtattttatt tttttaaata tcagcttaaa aacttatatt ttcgcaaaat
     3421 tgtatcacat catttttaat gcaaatcaga tcaatctgaa aatccgatga aattccattt
     3481 ttaagatgat aaaattctat agtttttaaa attttttcaa gtttttttct atccaaacgc
     3541 tcggaaactt cataatcatc ttgagtaaat ttaacctcta taaaatgtaa aatttcatct
     3601 tttttggcta ttatatcgat ttctccaaat ttagaataga aatttctttt taaaatttca
     3661 aagccctgtt tttttaaaaa tttacaagcc ttatcttcac ctaaaattcc atctaaataa
     3721 gcttttaaac ccattattct atacgcatca taaaaggttt ggtttttata aaatcttgtt
     3781 tgcgtaaaat ttcaagcaaa ttttgtatgc ttttttcata agttaaatgt gtagtaaaaa
     3841 acaaagtgct gtaattttca tcattttttt taggtttttg taaaaaacta tcgatagaaa
     3901 tattattttc actcatcaat tgtgtgattt tagataaaat ccctatttta tcttcaactt
     3961 tcacccttaa ataatatttt gtataaattt catctttgct taaaagcttg tattctaaag
     4021 tattcacaaa accaagcatt ggtgctttta cctgatctct tgctatatcc ataagatctg
     4081 aaatcacagc acttgcagtg gcctctcctc ctgctcctgc tccataatac aaactttcac
     4141 ccaacaaatc tccattaatg cttatagcat tcatcactcc atcaactttt gcaagcattt
     4201 tttctttatc tatcatagta ggatgcaccc ttaattctac tttattttca cgcaccttag
     4261 ctatacctaa aagttttatg gtaaattcaa actcattagc aaaatacata tcttcaggtg
     4321 caatttcact aataccctcg atcaaaatat cttcaggttt agctttaaga ttataagcga
     4381 tacttgataa aacaagcagt ttatgtgctg catcttgccc ttctatgtca aaagttggat
     4441 cagcctctgc ataacctaaa ttttgagcta tttgcaaagc ttgtttaaaa ctcatatttt
     4501 tttgactcat agaacttaaa atataattac tcgtaccatt taaaatccct tttatagcca
     4561 aaatattatt tgcacttaaa ccttctttta aaaccttgat aataggaatt cctccagcca
     4621 cacttgcttc ataaccaaaa gctaaatttt tagccaaatt ttcaagttca taacgatgat
     4681 aagcaagcat agctttattt gcagtaacaa cagctttttt cttttttaaa atttcactca
     4741 ctattttaaa agcttcatcc accccaccca ttaattctac aaaaacatct acatcagcat
     4801 ttaaaatttc tgcaacgcta tgagtaattg gaattaaagc atttttttta ggacttctag
     4861 caagagcgat cacaggagtt atgctttgcc cacatcttgc acgaatgagt ttatcatttt
     4921 ctaaaagaaa tttaaccacc gcacttccaa cagtgccata accaagaatc gctactttca
     4981 taacttactc ttttaaatat tttttgatat tacgtgcagc ttggcgtatg cgattttcat
     5041 tttcaattaa agcaattctt acatactcat cacctgcttc gccaaaacct accccaggac
     5101 ttactgcaac actagcacgc tgtaaaagtt gctttgaaaa ttctaaactt tttaaatgtc
     5161 ttttgctttc agggagtttt gcccaaacaa acatacttgc tcttggtttt tgaagtttcc
     5221 agcctgcatt ttcaaaagct tcaagtaaaa tgtgcattct tttatcataa gttgcacgga
     5281 tttcatctac acaagtttga tctccatcta aagctatggt agctcctact tgaataggtg
     5341 tgtacatacc ataatcaaac caagatttta tttttttaag cgcactgact aagcgtttat
     5401 ttcctactac aaaacccacg cgccagcctg ccatattgta agattttgaa agagtgtaag
     5461 tttctaccgc tatatctttt gcgccttcaa tttccaaaat agaaggagtt ttatagtcat
     5521 cataagttaa atctgcataa gcaatatctg aaataatata aaatctttct ttttttgccg
     5581 ttgctatcaa tctttcataa aaacttttct cacaagttac tgttgttgga ttatgcggga
     5641 aattaacaac gacatatttt ggacgcggga tgctttcatt taaagtttta tgtaaatttt
     5701 caaaaaattg attttcatca agctcaaatt tttcattata agctaaaggc atttttgcta
     5761 cattacctcc tgctataata aaagcttgag tatgtatagg ataagcagga gttggcacaa
     5821 tagcaacatc tccaggattt ataatcgctc ttgcaagatt tacaaaaccc tcttttgaac
     5881 ccatagtagc tacaacttca ttttcaggat ctaggttgac attatatttt cttttatacc
     5941 aattacaaat tgctaagcga agtttataaa tccccatgga tgtagaatat cccgaggttt
     6001 tatctttgtt agcactttca caaagtttat ctataatgtg ttgtggagtt ttaccattgg
     6061 gatttcccat tgaaaagtcg atgatatcct ctccagcacg tcttgctgcc atttttatcg
     6121 catttacttc tgcgaaaaca taatttggaa gtctttctat ggtattaaaa cggatttcat
     6181 caaacatttc ttaatccttt attttttaag tgtgattttt aaacccctgc gtatattatc
     6241 taaactatac atatcgctta caatagcata tatagcacca tttggaataa gttctgaaaa
     6301 atgattattt ttattttcgc tttttactgc tttaattaga ttcagatttt tatctaaaaa
     6361 gaagatttta ggaaaccaat tgtctaaatc atttgcatca ataatcaaat ttgtagcatt
     6421 ttttaaatca agcacatagt ctttaagggg cttttctaat gattttggag tatttaaatt
     6481 aacatttgta ttggttttta atacagcatt ggaaaaattt aaatcatatt catagtcata
     6541 taccccaata cgcttaatat tatttatata gacagaattt tcttttaaga gattgtaaag
     6601 cgttccagga tctaaaacat attgagattc tacttgtatg gtatagtcaa tatttccttc
     6661 tcttaaaatc aaatctgtag ggataaaata tatatatcca gcatctgtta aaacatcgga
     6721 taaaatttta aaaaacataa cttcatcagc ttttgcttta aaatttagtc ttagactttg
     6781 aggatttgat agtgttaagg caattaaaga attggttttt aatatttgag atatttttgc
     6841 aatatcataa tttccattat tatctatgta agaattattt gaaaataata attctagttg
     6901 agaattttta ctaggattgt ttactaaatt ttttgctaat tcaagacttg agattgcaaa
     6961 agatatatta acccaaaaag taagaataat aatttttttt accattcttt acctttattt
     7021 aattttacaa attcagcagc tgaaatactt gtaatttttc catctttaat caagaaacgt
     7081 tttgaaattc ctgcaggaaa tttttgttct ttattttctt gatcaaacat tgttaaagct
     7141 gcagcccctg ttaaaattaa ctgatcttta tctaaagaaa tattaaaatc tttttcttta
     7201 acaaagcttg tttttttaag gctttttaaa tctatcaaac ctatccaaat cttggtagag
     7261 gttttaaaat gtgcttcttt taaagaatca gtttttggtg tatttgtgtc ttcttggatt
     7321 tgggtatttt tttcttcatc gagtagggtt gtgttatttt cactgatatt attttctatg
     7381 cttatgtttt tatcattttc ttgtaatgag atgttttggc ttggtaaaac gctctctgtt
     7441 cgatttgttt cttgtgcttt attgttgtct ataacaacaa cattgtttcc acctaaagat
     7501 tttaaatttt cttgtgcttg tcctatgata tctataactg ttgcactagt attattttgt
     7561 tcatctttga aaaaagtttt aagtgtatta aaataataaa ttccacttcc tataatcact
     7621 aaaacaataa gaacaatcaa aaaaggccaa gtgttaaagg atttttgact ataagcatct
     7681 agttttgggg ttatcatttt tgattttgtt tgtggagtag gattgttttc gttaagataa
     7741 gcttcatact cttcgttaaa atcactaaag tcgagttcgt attctctgct caaaatttta
     7801 acaaaacctt taacattaaa acgacttaaa acagcaaaat tcttttctac taaagcttca
     7861 agaaaatcaa gttcaatttg cgtttttgct gcaacttctt ttaaatttaa ttcttgtatt
     7921 tttttccaat taagcattta acatcctatc acaaagtatt gcaaaagcag cgctgacatt
     7981 aagactatca aaattatttt tcatcgcaat gcccacacat tcatcgcatt tttttacaat
     8041 tttagagctt aaaccaaaac cctcactacc caaaactaaa acttttttac cattgcttat
     8101 ttttacactg tgaatttctt ttcccgagcc atcactcgca taaaaataaa aacctacttg
     8161 ttttagttca tttattacac ttaaagcatc gttgcttatc acaataggta aatcaagagc
     8221 cgctccgctg cttgtgcgaa ttactccttc catggctaat ttttcaccaa taaaaattaa
     8281 agccccaacc cctaaagcat aagctgtacg cgtgatagcc cctatatttc ctacatcact
     8341 aattccataa agcataacaa taaaatcatt ttttttgatc tcatttaaat ttgcaaaaga
     8401 actttcttta atatctagca aaaaaccttg atgatttcca cctttcgcat aagcttgagc
     8461 agttttaaaa tcaagttttt tgattttaaa acctgatttt gcgattttgg aaaaagtaat
     8521 tttatcacat tcttttgcta aataaagctc attgatacag tctttatgat attctaaaat
     8581 ataaaaaaat atttgcttcc cataaactat catattaaaa ttttacctaa tcttgactta
     8641 aaagcagttt ttgataaatt tcttttgcat tttttccatt gatctttgat aataattttg
     8701 cttttgcttt taaagacagc tctaaatcca taatatcttt ttcacaaaga gtattttgca
     8761 aaaaattttg ctcttttgat tgcagtacta caacccattc accgtttaaa ttagactttt
     8821 ttaaaatttc agaaagctct ttagcattgc ctttaaattt tttttcaaat tttttactga
     8881 tttctttaat caaaaaaatt tctctttggt tgtctagaat cataatctgt tctactaaag
     8941 ataaaatacg cttgggggat tcgtaaataa tacttggata aggaaagttt aaaatttttt
     9001 ctatatcttt ttgtctttct ttgcctttat ttgctaaaaa accaataaag ataaattctt
     9061 tttgacaaaa tgctgagctt acaagagcaa ctaaggctgc atttgcacct ggtaaaattt
     9121 cataggtgat attattttct tgtgcaaatt ctaccaaagc cttgccagga tcactaatcc
     9181 ctggcattcc tgcatcgctt aaataagcta catttttttc aaatatcttt aaatcaatac
     9241 ttgctaaaac ttctttttca ttatgggagt gtaaggctat aaatttagaa atatgtatat
     9301 cagtgtgaaa tttggtattt aataacgaaa tcaaagactt acttactctt gtatcttcgc
     9361 aaaacacaag atcgcaagtc tttaaaagtt ctaaggctct aaaagaaata tcgcttaaat
     9421 ttcctatggg agtaggaata aaataaagca taattattgc attgcgtatt ttttcttaaa
     9481 tttctctaca cgacctgcag catctacaat tttttcactg cctgtaaaaa aaggatggca
     9541 atttgaacaa atatctactc ttaattctgc tttgtttgac tttgttgtaa aagtatttcc
     9601 acaagcacaa cttactttgc attctacata ttctgggtga atttcttttt tcattagttt
     9661 tccttaaaaa ttaaaacaat aagccgtgat tataaattat ttaacataaa aaagagatta
     9721 atttaagaaa agttaaagca aaatttttga agctatagct ataatagctg tttgactttt
     9781 tagaatatta gagcttttaa gagagatttt ccggttaaac aataatctct catcattgtt
     9841 aaatccacct tcaggaccta taaaatataa ttctttttca tcgaaatgac tttgttgttc
     9901 tccttgaaaa tcaaccataa ttgcatttgg aaatttttga acaaattctt gagtgctttg
     9961 gtggataatt aaatccattt tagtatttct accgcattgt tcacaagaag aaataatgat
    10021 tttttcaaat ctttctaaat cgattttaaa atttctttgt gaaaaatttg taaaaaccaa
    10081 atgtaacttt tttactccaa gttcatttaa gaaaggtaga gttttttcta aaattttaat
    10141 atctataatg gctaaggcta agtttaattc actttgtttt atattttgtg attttttgtt
    10201 taaaaatttt aaagtgcaag aatttcttgt taaatttgtg attgtatagt tgtaaagaaa
    10261 attatcttgt aaatttctaa gatttagctc cgaattttcc tttactcttc ttacttttaa
    10321 atggttaaag ttttcacctt gaagttgtat aaactcttct ccagcttgct tgttatacaa
    10381 aaattgcatt ttatagatat ctttctatta aaaaaggcaa aaacaataaa aaaatttcaa
    10441 aaggtaaaat caaacaacta atccatctaa aagtggcata ttttctaaat cttcttgctt
    10501 ttttaaaaca aacaaagtga aaaattgcta aggcaaaaat taagatccaa gaaaaaatca
    10561 ttacccagat attgacattc atttgaaatt gtttcattgc tgataacaaa caacctgtaa
    10621 aaataatcaa agctaaaaat aaataataaa ttggtaaaaa taatcgtatt ctgcgaataa
    10681 aaatgaattc ggttttaaaa tttccttgtg ttagtataag ataaaaaagc attaaaaaac
    10741 cgctcgcata aagactataa agatgtaaag ctaaaaagaa ttcgtaactt tgatccatta
    10801 ttttcctttg tttataaaat cagctaaatt ttgaatttgt tcatcactta aaaaactatg
    10861 gtttttatct tttatcgttt ttattttttg tataaaaatt ttattgctca aggttttaat
    10921 ggccgtgctg tttttaggtt ttaattcccc tttttctcca tgacaagtgg cgcatttttg
    10981 tttatataaa gagttgataa tactaggatt gacttcatgt tcatcatttg aactttgtgc
    11041 ttcatcatct acaggtaaag gcaggttgga gtcacttaat tctgtttttt catcgttttg
    11101 ttctatttgg actacttctt gatctgtatt ttgagtcttg gaaatatttt tttcatcatt
    11161 agaacaggca gataaaacta ataaaaaaaa acttaaggca attaaaattt tagctttttg
    11221 cattaaatct cctttggatt tataaaaatt tcttcatttt ttaatttgtt ataaaaatct
    11281 atatcattcc attctgcttt aatgccattg gaaaattcta tgtcttgaag tgaaattttt
    11341 ggcattagct cactataggc atcttctcta aaaccttgtg catagcctgt tcttgtttca
    11401 tgaacaatga tgctttgtaa agtcactcct tgttctccat ttaccatttt tgtttgtttt
    11461 aataaagcat ctataagtat gaaaaataca cgacaaaaat tttcagcact tacattaaca
    11521 ggcaggcaaa tccaacgact tgaatatttt ttcatttctt ctaaatattt tgcgtcatca
    11581 tatttaaaaa gagtgatagc atgatcaaaa ctatcaataa tttggcgtat ataggttttt
    11641 aaaagtccaa aatcatagac cattccagca ttatctaaat atttgctttc aagtaaaact
    11701 tcaactttgt aagaatgtcc atgaatgcta cttttgcaac gcttagaaga acaaaatcta
    11761 acaatgtgtg cgttttcaaa ttcaaataat tttcttataa tcatacaccc tctttatcgt
    11821 tccaaagacg aatatgaatt ctatcagaat aattataacc attcttaata caaaattcag
    11881 caattttttg agcatttttt ttaaggtttt gctcattttc acccataggc atacaaaaaa
    11941 tttgatttgg agcttctttt agaatttcat tgatttctaa aaatgaatta tcaagagtat
    12001 tggcatctaa aacaaattta taaaaactat cttttgcgta atttttaaat gcttttaaag
    12061 ctttaaaatt taatcgttta tcttttttta tcccactatt ttggagttta acgcttaaag
    12121 caaaaataca ttctttgtaa aaaggatatc tatcaaaatc aatttctatg cttccattgc
    12181 tttcaaagtg tatttcgaat ttatttttta ataacatttg gataaattct ataaattcag
    12241 gattttcata atggattaat ggctctccac ctgtgataac aactatagga tcaaagtctt
    12301 tttttaattt tatcactctt tttaaaagtt cattagcatt taaagtttca taactttctt
    12361 taaaatcttt tgtgaaaaca gctcttatcg tgtcacatcc aatgagagtt ttatcgtttt
    12421 ttgatatttt tacattaaaa cctaaacagt tgaaattgca accagcaaaa cgcataaaaa
    12481 tagctaattt tccattatat ttgccttctc cttgaatgct taagaaactt tcaacaagtt
    12541 gcaaaattaa cctccagttt gataaaaagc acgagatgag gtttcattat caacaacact
    12601 ccatttattt ttttctggtt tatttcttaa tacttcttgt aatatttcta cagcggcttt
    12661 aatatcacct tttcgaaccg cttcttttat gcttaatgct tcatcaaaat aaaggcaagg
    12721 tattaacaag ccttcagcac ttaagcgtat gcgattgcaa gaatcgcaaa attcatggct
    12781 atgaggatct ataattccaa attcataatc atctgccttg taaatactca caggtgcttt
    12841 ttcatctttt tttataagtt gaatttgata tttttgactc aaaatttgta taatttcatc
    12901 tctttttaat ccttgtaatt taccataagc atgagtattt tccataaatt ctataaagcg
    12961 aatttgagct ttttttgatt ttgcaaattc caaaagagat atcagttcat catcgtttaa
    13021 atttttaaga gctacagtat taagttttac tttcaaatct agatttaaag cttcatcaat
    13081 tccagataaa acactatcta atacatcttt ttgcgcaaga gtttttgctt ttttgtgatc
    13141 tagggtatca agtgaaatat taagtcgttt aagtccagca ttttttaggt ctttagcaaa
    13201 gtcttttagt aaaaatccat ttgtagttat agcaaggtca atatcgcttt tataatcgct
    13261 aatcattttt ataaaaatac ttaaatcttt tcttaataaa ggttccccac ctgttatacg
    13321 gattttttca attccttcgt ctatagctgc tttaacaaat aaaaaaagtt cttcaaagct
    13381 taataaattt tcttttggct gataatcgaa aggaattttt ggcatacaat aaaggcagcg
    13441 aaagttacat ctttgtgtaa ctgaaattct aagataattt atctttctac cgaattgatc
    13501 tataagcatt tattttccat tctattttat taatttctta aattttaaga caagttctac
    13561 atttccagtg ccaatgcgta aatctttagc gatttgttct atgctttttc cttctttgaa
    13621 aagattttct attttttgtt cttctgtatc gtaatttggt gtaagtttag ccatgctttg
    13681 tgctttttgt tccaaattta aaagacgatt ttgttgttca ttttgaaaat cttctatgat
    13741 atgttccata gtttttagtg ttcttaaaac aggagtgatt tttgaactga tttgtttatc
    13801 aagttcaatc ataatttctt cttttaaaag agaggtttta tagtcttcat cctcttcgct
    13861 atcatcttta actcctaatt ctttacgaaa ataatgaagt tctttggtaa tatcttctat
    13921 cacattttga agttttgcta tttttgcatt attttctctt tctttgatat tcatgtaggc
    13981 tagcattgca attaaaagca caattataaa aactaaataa agtacatcat cactcattct
    14041 tggcctttct tatttcttat catatttctt tggatttcaa caacaaaagc atcaaaagcc
    14101 attttgtctt caggcttaat tttgataatt tttgccaatg tttgactttg agctttgata
    14161 aaaatagcta ttttttgatt atttaaatca aatcttaaat aatattcttt atcttcttct
    14221 aaaatagtat ccaaaaaatt tagatactca aaatttaaag attctattac ccctttttgc
    14281 ttaagtggta taagttcttt atttttatct aaagaatttt caagtcttaa aatatcttct
    14341 tttagactta aaagaagatc aaaaataatt ttttcaccct cgtcaaaatc aatgcgtaaa
    14401 gcaagttttt tccattttaa aatttgagaa attgctccaa gttttaggta ttctccaaga
    14461 aaacggttat tttctatttc acaacattct aaatgagctt caaatcctgc tttaaaaagt
    14521 gctaattcca taataaatca atccaaataa aaataaaaaa gataatactt aaataaccat
    14581 ttagagtaaa aaatgctcta tcaatatgag caaaattctt atgaacaatt ttatgttcca
    14641 aggctaaaat aataccgctt ataattaccc caataagtgc tatttttcca agtgctacac
    14701 cccaaacttc ccacacaaaa agaagccaaa ataataccgc taaaatatgg caaaaagatg
    14761 atataaataa agtagccttt gaaccaaatt tagcaggaat agagtgaagt cctatttttt
    14821 tatcatactc catatcttgt aaagaataaa gcagatcaaa cccagctgtc caaaaagtta
    14881 cacctaaaca taaaataacg ctataaatgt gaatttcacc cataattata acacttcctg
    14941 caataggcgc aagtcctaaa caaaatccta aaactaaatg tgctaaagaa ctaaagcgct
    15001 taaaagctga ataaatagcc aataccaaaa gcacaggaaa agacaaataa aaggccaagg
    15061 tattaataaa ataagaacat gatataaaaa taagtgcatt aataatgata aaaatccata
    15121 cgctttttct acctattttt ccactgacat tagggcgatt tgcacaacga ggattatcct
    15181 tatctatatc ttcatccatt aaacgatttg tagccatggc aaaatttctt gcacttactg
    15241 cacaaataat gcctaaaatc aacgccttaa aaccaaacca agcagtgtca tttgcaagtt
    15301 ttgatgctac aatcatagag gaaaataaaa aaggcaaagc aaaaatagaa tgcttaaata
    15361 ctacaagttc taaaatatct ttaaatttta tccagaatgt gttcattttt ctactttaaa
    15421 atattttttg ctatgatttt actaaaattt ttataaattt taggataaat attaaaatgt
    15481 tttttgaaat agcattaata ggaacaaccg cgagtggaaa aacatacata gccaatactt
    15541 tagcaagaga atttaatgct gttgttttaa gtcttgatag tctttgtgtt tataaagaga
    15601 ttaatatagc aagtgccaag ccttcacaag atgatcttgc gagtataaaa tactttgggg
    15661 taaatttatt gagcgtgaat gaacatttta atgttgagtt attcataaga gaatatcaaa
    15721 aagcaaaaga atttgcttta gctagaaatt tacctctaat tatagtaggt ggaactggat
    15781 tttatttaaa aactatgata gatggtttaa gtgaaaaaac cttagagtca aagagttctt
    15841 taaataacga tgaaatttat gctcttttat taaatattga tccaaactat aaaatagaaa
    15901 aaaatgatac ttatagatta aaaaaatggc tgggtattta tgaacaaaca agagaaattc
    15961 ctagtgaatt tttaaaaaga acacaaaaaa ctggggtgct taaagatata gaaatttatg
    16021 agcttgcgtg ggataaagaa attttaaaaa aacgtattaa aactagaaca aaagaaatgc
    16081 ttgataatgg acttttagat gaagcaaaaa ttcttttttc taaatttgat cataaactta
    16141 aagcattaaa ttctataggt ttgaaagagt gtaaagaata tttagatgga gaaatttcct
    16201 ttaaagagct tgaaaattta atcacgatac atactacaca acttgccaaa agacaaagaa
    16261 cttttaataa aaaatttcaa agtaaagcct tggaatttga taaagcttta gctactttaa
    16321 gaatgaaatt ttcaatcgaa aaataaatgt tctattagaa tttttactcc tagtataatt
    16381 aaaaccaatc cgcctaaaag ttcagcttta tttttaagat aaattccaaa tttattccct
    16441 atttttagag caatgataca taaaatgaag gtgataatac ctattaaaaa tatagctaat
    16501 aataaattta catttaaaaa tgcaaaactc acaccaactg ctagtgcatc gatactcgta
    16561 gcaattgcta aagctagcat ggttttaaag ccaaattgat tggcattact atcgcaattt
    16621 tcattttcca atgactcttt gatcattttt aatcctatta aagaaagtaa aataaaagct
    16681 atccaatgat caatactcgc aataaaagat gcaaaagtta tgcctataaa ataaccaata
    16741 gttggcatca aagcttgaaa tccaccaaaa taaattccaa caataagata atgttttaaa
    16801 tgtagttttt taacactaaa acctttgcat agtgatacag caaaagcatc cattcctaaa
    16861 gcacaggata aaaaaataag actataaaaa tccataacaa atcctaaaat tttataaaaa
    16921 attgaagatg aaattataat caaacaaaga taaaaat
//
LOCUS       DAPIYB010000035        16895 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.035, whole genome shotgun sequence.
ACCESSION   DAPIYB010000035 DAPIYB010000000
VERSION     DAPIYB010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16895
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.035"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..426
                     /locus_tag="RJ318_000896"
     CDS             <1..426
                     /locus_tag="RJ318_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430781.1"
                     /translation="NFIISKINDYKTKEANEIYANLIQDPSNKNLLEQLKNKNTNLYA
                     IFLLKENINDFNNTTLQNELKQIYNNAQTNTLLKNIIALSLGDKSIFLKNYDKLLEAY
                     KLLEQNKIEEANVLLSQIKENSSLNQIAKNLKHYQGITQ"
     gene            423..1421
                     /locus_tag="RJ318_000897"
     CDS             423..1421
                     /locus_tag="RJ318_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7430782.1"
                     /translation="MKKIFLTLFCLIFLCACGTKRQYFEPKQTDGDLSHNSNLKSKIV
                     DWNLVSAKLSNNTTILKNNISIDKFKLPKNYMLLAYQDGEYFTADNNGNLKIFDNSYN
                     EIYNFQFDASVVGVASNGDDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANP
                     IFLDNIIVYPTLDGKILILSRNNLQIIKDVVISAENFFNNVIHLSVIGDKLIAATAKK
                     IIVVSPARTLYLDADIKDVALSDDGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFVKS
                     NIYNNYLYIFEKTGYLIKMNLNLDNAQVFKLSEAVDKISFMGNGKFYYGDKILDLL"
     gene            1418..1708
                     /locus_tag="RJ318_000898"
     CDS             1418..1708
                     /locus_tag="RJ318_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tram-like protein"
                     /protein_id="HDV7430783.1"
                     /translation="MIKILEQTIKALKLNLKPYDLSMLTRKKSYICAKDQNNILFMYT
                     GKTKFLMKDALFLENLAQQININNKYFFSMASLCSKAKNHLEMKGFNIYVAL"
     gene            1695..2324
                     /locus_tag="RJ318_000899"
     CDS             1695..2324
                     /locus_tag="RJ318_000899"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HDV7430784.1"
                     /translation="MLLCDIGNSNANFLDDNKYFTLNIDQFLEFKNEQKIFYINVNEH
                     LKEHLKNQKNFINLEPYFLFDTIYQGLGIDRIAACYTIEDGVVVDAGSAITIDIISNS
                     IHLGGFILPGIANYKKIYSHISPRLKSEFNTQVSLDAFPQKTMDALSYGVFKGIYLLI
                     KDAAQNKKLYFTGGDGQFLANYFDHAIYDKLLIFRGMKKIIKENPNLLY"
     gene            2443..3789
                     /locus_tag="RJ318_000900"
     CDS             2443..3789
                     /locus_tag="RJ318_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDV7430785.1"
                     /translation="MSQQEFDVLVIGAGISGAALFYELARYTNIKNIALIEKYNTAAT
                     LNSKGTSNSQTIHCGDIETNYTLEKARKVKRTADMIVKYGLMQNAQNNFMFSHQKMAL
                     AVGDIECDYMKKRYEEFKELYPYIKFFDKAKIKQIEPKVVLGEDCNQDRPENICAMGV
                     ESGEVFTTVDFGKMSINLIEQAQKQNKNTFVAFNQEIIHIEKKDDIFILKTSNHQEYH
                     AKSVVVNAGAHSLYLAHKMNLGMDKSCWPVAGSFYLTKQKLLNGKVYMVQNPKLPFAA
                     LHGDPDLLADMNTRFGPTALVIPKLERYHGLKSVPEFFEALKLDKTVLKVTFNMFKDA
                     TIRNYIFYNYLFELPFVDKSLFVKDAKKIVPSLKASDIYYAKGFGGVRPQVIDKTKGE
                     LMLGEASITETPGIIFNMTPSPGATSCLGNAERDAKLVCNYLGMEFNEDKFSSELL"
     gene            3838..5280
                     /gene="pyk"
                     /locus_tag="RJ318_000901"
     CDS             3838..5280
                     /gene="pyk"
                     /locus_tag="RJ318_000901"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDV7430786.1"
                     /translation="MLKKTKIVATVGPASEKEEILRQMIINGVNVFRLNFSHGTHEYH
                     KKNLDTIRRVAKELHTRIGILQDISGPKIRTGELKEPFELKKGDRLDFYRETILGEKI
                     AQNHYKISINQKSILDMLKIDEYIYLYDGSIRAKVVNIDNQKIETIIENDGFLNSNKG
                     INFPNTKINIDVITQKDKNDLLWGIKNEVDFLAISFVQNAHDIDEVREILAQNNAKIS
                     IFAKIEKFDAVENIDEIIKSSDGIMVARGDLGIEVPYYKVPNIQKEIIQKANNASKPV
                     ITATQMLFSLAKSKTATRAEISDVANAVLDGTDAVMLSEESAVGIDPANAVDIMCQTI
                     IETEKRYPYNKFNDFNDLDNTDKIMRSSAHLATDLNADAIFSLTSSGKSAIKIARYRP
                     NIEIIAVGHSEKTLNSLSIVWGVNPAILVNKSNELTELLKDSVRSSVEKGFMDEDKCY
                     LLTAGFPTGVEGTSNLIRILNKEQIAYYLQ"
     gene            5378..6013
                     /locus_tag="RJ318_000902"
     CDS             5378..6013
                     /locus_tag="RJ318_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430787.1"
                     /translation="MQVNTFSNIASMARTQVSNKKADDAKENTKDKNVQSANSSKDVD
                     KNTLEKLNALGGKGITQIYLVQFQQQTMNAVIGSSNAQTGLDSLLNGANLDTAKSILT
                     NIDFASLGYSSKNPLDMNTDELQQLVSEDGFFGVENTANRIADFVIKGGGDDVEKLKK
                     GLEGMKKGFEQAEKMWGGELPQISQNTIDAALKKVSDRIDELGGKTLDLQA"
     gene            complement(6044..8506)
                     /gene="pflB"
                     /locus_tag="RJ318_000903"
     CDS             complement(6044..8506)
                     /gene="pflB"
                     /locus_tag="RJ318_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility protein PflB"
                     /protein_id="HDV7430788.1"
                     /translation="MAEQEDIILEKPEDGLNQPRLDESLEGFKGQEGQAPEDEEFASL
                     PEELPQENSESGFKFTRESAPEDVSTFEEVESQEPTPWYKDRKFMSLVGLSLGIICIL
                     VFTLFYLTFSEGKIKPDIIASKPLEQPVIMPDESYKYNDMQRIDGMIQKANALYLKGE
                     VEQALKVYEQVAVYNESLSNYNLGVSQMNENKFQEAFESFKKAIANGENQSVAAINAA
                     VCALKLNDKEKFRYYIDLAQVYLPKEGKSKLYDYYLSLINYYKGYYPEALQMLQRTDV
                     EPYSDVAKYLSAKIYAKMDFDSKAIQQLNSQGNFESSLSLGLLYARIGEYAKAKVALS
                     TAMKIERDFNQSLAALTLVDIKTGNYQDMLARLQNSYDNDKDRYKILDTYKIQVRLNK
                     DLFNIAVAQNSFSKDLLKKQKDQFDLLFYFAPYQVFDSKQAALYIKKANVTDFVDDST
                     DAGIYLNISKALSSTNVKIANIINYALNQKLRLANQEFQKLIKDYPEHSILHYNLALT
                     YAQMQNYELAYKHFSSSYHLNPKNYLAGAFAMFCAKLIDIDTTKLYNEILDNIAADSN
                     FKANMQKSMLFLVNNNYISMLPYLDETKKDTPLSLIFEAIVAKNNNLNNQVDVKIAKL
                     RSELPEDILANILYFNSLNSNLNIKEYAQNAQIHFKNLKLDYRSVFGGPNIAREFYVN
                     LMHIAGLLNLERQKFKELINVSGAKDEGILQTLAYLDIFAQQYEEAYALYNSLIDDYG
                     AKDTKTLFLAAVAAVGANNPNSAIALLQLSKLTDKNNKESKAALGMLYQEVKNYEAAI
                     SQYKTLPNNFKSEFFTFDINNN"
     gene            complement(8516..9751)
                     /gene="serS"
                     /locus_tag="RJ318_000904"
     CDS             complement(8516..9751)
                     /gene="serS"
                     /locus_tag="RJ318_000904"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDV7430789.1"
                     /translation="MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKIA
                     LEEFQAFQNKFSKELATAEDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPN
                     IPDECVPVGEDENENVELKKVLNPPSFDFTPKEHFELGESLNWLDFMRGVKISQSRFC
                     VLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDD
                     EDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQF
                     EKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEV
                     WLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIME
                     NYQDKEGKIHIPDVLKKYF"
     gene            complement(9762..10721)
                     /gene="trpS"
                     /locus_tag="RJ318_000905"
     CDS             complement(9762..10721)
                     /gene="trpS"
                     /locus_tag="RJ318_000905"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDV7430790.1"
                     /translation="MRVLTGLQPSGDLHIGNYFGAIKQMVDAQEKSQMFMFIANYHAM
                     TSSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLE
                     RAHSYKDKVAKGLSASHGLFSYPVLMAADILLFDTRIVPVGKDQIQHVEIARDIALKV
                     NNEWGEIFTLPEARVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKTLKKQISSIVTDS
                     TALEDPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKIYLNELVNAYFKE
                     AREKYNELLEKPSHLKEILDFGATKARKIAQEKMQKIYEKIGL"
     gene            complement(10718..11215)
                     /locus_tag="RJ318_000906"
     CDS             complement(10718..11215)
                     /locus_tag="RJ318_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HDV7430791.1"
                     /translation="MMKAKNIVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFN
                     QKVSEIFEQKGKNFFREQEQKMADFFSSCEKACIATGGGFVNVSNLEKAGFCIYLKAD
                     FEYLKKRLDKDEISKRPLFYDEIKAKKLYNERLSKYEQKANFILNIENKNIDELLSEI
                     KKVIK"
     gene            complement(11202..12584)
                     /gene="der"
                     /locus_tag="RJ318_000907"
     CDS             complement(11202..12584)
                     /gene="der"
                     /locus_tag="RJ318_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDV7430792.1"
                     /translation="MQSIILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTQI
                     HIHSKKAMLIDSGGLDESDELFKNVKKNTLKVAKESDIILYLVDGKLAPDDEDRQFFY
                     SLKKLGKPIALVINKVDNKKDEERAWEFANFGVKEIFNLSVTHNVGLDELYEWLEKFL
                     HEEFLIPDEEENLEDFLEYYEEGKEFQFKEVDQNHIRVGIVGRVNVGKSSLLNALVKQ
                     ERSVVSSIAGTTIDPVNESVVHKDKVIEFVDTAGIRKRGKIQGLERFALNRTEKILSH
                     SQIALLVLDAHEGFNELDERIAGLVAKHYLGVIIVLNKWDKSEMDFDKTVKELRLDRF
                     KFLAYAPVISVSALSGKRVHVLLDKILQIFENFTQKIQTSKLNTLIENATRAHPLPHD
                     YGKLVKIYYAVQYDLAPPKIALIMNRPKALHFSYKRYLQNQIRKEFNFEGVPLVIASR
                     KKGSKENDES"
     gene            12686..13618
                     /locus_tag="RJ318_000908"
     CDS             12686..13618
                     /locus_tag="RJ318_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDV7430793.1"
                     /translation="MLKVIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFR
                     NIIGIFFIVYLLKRSKAHKEGGYFWLLVFRGVVGTLSLYMFFYNVSNITLGGAFAFQK
                     TAPIFITLIAFVVFKENIGIKGWIGILIAFGGVLLIAQPWAHNLNHSGFDLKNSVIGI
                     TSGFLAALALTSVRELRKSYTTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLD
                     FILAPFVMPSLTAWLIIAIMGTLGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMIV
                     GIILGDNLPSTMVFLGIIGIIFGGLILVKNKGKK"
     gene            13615..14430
                     /gene="kdsA"
                     /locus_tag="RJ318_000909"
     CDS             13615..14430
                     /gene="kdsA"
                     /locus_tag="RJ318_000909"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002827952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDV7430794.1"
                     /translation="MKKMILIAGPCVIESKDLIFKVAEQLKNFNENPNIEFYFKSSFD
                     KANRTSINSFRGPGLEEGLKILQSVKDEFGMKILTDIHESNQANPVSEVADVLQIPAF
                     LCRQTDLLVAAAKTKAKINIKKGQFLNPSDIKYSVKKVLQTRGIEDEGYEAAQRNGVF
                     VAERGASFGYGNLVVDMRSLVIMREFAPVIFDATHSVQMPGAAGGSSGGKSEFVEPLA
                     RAAAAVGIDGFFFETHINPCEALCDGPNMLNLTRLKNCVNTLLEIQNIIKENK"
     gene            14427..14891
                     /locus_tag="RJ318_000910"
     CDS             14427..14891
                     /locus_tag="RJ318_000910"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDV7430795.1"
                     /translation="MNIIEGKLNLDSNTKIAIINARFNHIITDRLVEGAKDAFLRHGG
                     KEENLSLILVPGAFELPYALKKAIESKKFDAICCVGAVIRGSTPHFDYVSAETTKGIA
                     NVSLNHNIPVSFGVLTTDTIEQAIERAGSKAGNKGFEAMTTVIEMLNLSKEL"
     gene            14891..15289
                     /gene="nusB"
                     /locus_tag="RJ318_000911"
     CDS             14891..15289
                     /gene="nusB"
                     /locus_tag="RJ318_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDV7430796.1"
                     /translation="MATRHQVRQSVISLLYAFELNSQNNVFVDEILDEKKIRNEQKNF
                     TLNLYNGILDNLNNIDETLNSFLNDNQITALGHVERAILRLGAYELLFTDTPSAIVIN
                     EAIELAKELANDNSPKFINGVLDALIKAKK"
     gene            15286..16125
                     /gene="pyrF"
                     /locus_tag="RJ318_000912"
     CDS             15286..16125
                     /gene="pyrF"
                     /locus_tag="RJ318_000912"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDV7430797.1"
                     /translation="MKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFI
                     EELKKVDDFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHASAGKIAIQEVMTRLS
                     KFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVFESKK
                     IKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPIYKNENPRAV
                     CEKILNKIHRKNISENDIEQNYEVIQQKEWDMCNHFEEWIKTQPDKEHALKEFYAKCG
                     IKY"
     gene            16122..>16895
                     /locus_tag="RJ318_000913"
     CDS             16122..>16895
                     /locus_tag="RJ318_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430798.1"
                     /translation="MNYQQLECDYFNLYNQFLSVDFQISLFEKDHKGLIKDFIFFYYQ
                     ILKQKDLSYLLEVRNKISLKVYNYMQEHSTSPKDLSLICLRENKHIEFFQIFYKALAY
                     FVAFRKKLDGEQKIKNLISNINDCFGYHFLNSDFNNLQNFQKSDLFTLPEKHLKYFHF
                     AMIHLCFMVLNPLNFKDSNRHLDKAINYLVDGTFEIYELIFKEYFLLFSKDKELKDEL
                     RKLKKLEFKILMQETSKIKLLNHYKEFCEEIFYNIELEKI"
BASE COUNT         6048 a         2669 c         2457 g         5721 t
ORIGIN      
        1 aattttataa tctcaaaaat aaacgattat aaaacaaaag aagcaaatga aatttatgcc
       61 aatctaatac aagatcctag caataaaaat cttttagaac aacttaaaaa taaaaatacc
      121 aatctttacg ctatcttttt actaaaagaa aatattaatg attttaataa tacaactctc
      181 caaaatgaac taaaacaaat ttataataat gctcaaacaa acactttact taaaaatatt
      241 attgcattat ctttagggga taaatcgata tttttaaaaa attatgataa attattagaa
      301 gcttacaaac ttttagagca aaataaaatc gaagaagcta atgttttact ttctcagata
      361 aaagaaaatt caagtttaaa tcaaatagct aaaaacctca aacattatca aggcattaca
      421 caatgaaaaa aatattttta acactatttt gtttaatatt tctatgtgct tgtggcacca
      481 aaagacaata ttttgaacca aaacaaaccg atggagattt aagtcataat agcaatttaa
      541 aaagtaaaat cgttgattgg aatctagttt ctgcaaaact tagcaataat acaactatct
      601 taaaaaataa tatctccata gacaagttta aacttcctaa aaattatatg cttctagctt
      661 atcaagatgg ggaatatttt actgcagata ataatggaaa tttaaaaatt tttgacaatt
      721 cttataatga aatttataat tttcaatttg acgctagtgt tgtaggagta gcttctaatg
      781 gagatgattt agcccttgta cttgcaaaca atactatagt tcttgcaaat cgttctttgg
      841 gtattaaatt cagtcaaacc ctaacctcag ctccagccca agacagtcgt accgctaatc
      901 ctatattttt agacaatatc atcgtttatc caacactaga tggtaaaatt ttaattcttt
      961 caagaaacaa tcttcaaatc attaaagatg tggttatttc agcagaaaat tttttcaaca
     1021 atgtaatcca tctaagtgta atcggagata aacttatagc agcaacagct aaaaaaatca
     1081 ttgttgtaag ccctgctaga actctttatc ttgacgctga cataaaagat gttgcactta
     1141 gcgatgatgg tatttttata ctagaaaaag atggcactat tattaaaact gattataact
     1201 taagaaaaat tgcggaaaaa aaatttgaat ttgctatttt tgtaaaaagc aatatataca
     1261 ataattattt atatattttt gaaaaaacag gctatcttat caaaatgaat ctgaatttag
     1321 ataatgcaca agtatttaaa ctttcagaag ctgttgataa aatttctttc atgggaaatg
     1381 gtaaatttta ctacggagat aaaattttag atttgctatg ataaaaattt tagaacaaac
     1441 aataaaggct ttaaaattaa atttaaagcc ctatgactta agtatgttga ctagaaaaaa
     1501 aagttatatt tgtgctaaag atcaaaataa cattcttttt atgtatacag gaaaaacaaa
     1561 atttttaatg aaagatgcct tatttttaga aaatctagca cagcaaatta acataaataa
     1621 caaatatttt tttagtatgg cttctctttg ctctaaagca aaaaatcatc tagaaatgaa
     1681 aggatttaat atctatgttg ctctgtgata ttgggaattc aaatgctaat ttcctagatg
     1741 ataacaaata ttttactctt aatatagatc agtttttaga atttaaaaat gaacaaaaaa
     1801 ttttttatat caatgtcaat gaacatctca aagaacattt aaaaaatcaa aaaaatttta
     1861 tcaatcttga accttatttt ttatttgata caatttatca aggattagga atcgatcgca
     1921 tagcagcttg ttatactatt gaagatggag ttgttgtaga tgcaggtagt gctattacaa
     1981 ttgatattat ttctaattct atacatcttg gtggttttat cttgccaggt attgcaaatt
     2041 ataaaaaaat ttatagccat atttcaccac gattaaaaag tgaatttaac actcaagtta
     2101 gtcttgatgc attcccacaa aaaaccatgg atgctttaag ttatggtgtt tttaaaggaa
     2161 tttacctact gataaaagat gccgctcaaa ataaaaagct ttatttcact ggtggagatg
     2221 ggcaattttt agcaaattat ttcgatcacg caatttatga taaactttta atctttcgag
     2281 gaatgaaaaa gattataaaa gaaaatccca atttacttta ttaaaaatgt tacaaaaatt
     2341 ctcattaata tcaaacctta atgaaattta actttttgta aaacaaattc aattaaactt
     2401 ctatttagaa aaaagtttat taaaataaaa aaaggaaaaa caatgagcca acaagaattt
     2461 gatgtgcttg tcatcggagc tggaatttca ggagcagcat tattttacga gcttgcaaga
     2521 tatacaaata ttaaaaatat tgctttgata gaaaaatata atacagctgc aacattaaat
     2581 tctaagggaa cgagtaattc tcaaaccatt cattgtggag atattgaaac caattatact
     2641 ttagaaaaag cgcgaaaagt aaaaagaaca gctgatatga tagttaaata tggactcatg
     2701 caaaatgcgc aaaataattt catgttttct catcaaaaaa tggctctagc tgttggagat
     2761 atagaatgtg attatatgaa aaaacgctat gaagaattta aagaacttta tccttatata
     2821 aaatttttcg ataaagcaaa aatcaaacaa attgaaccca aagttgtttt aggagaagat
     2881 tgcaatcaag atagacctga aaatatctgc gccatgggtg ttgaaagcgg cgaggttttt
     2941 acaactgtag attttgggaa aatgagtata aatctaatag aacaagctca aaaacaaaat
     3001 aaaaatactt tcgttgcctt taatcaagaa attattcaca tagaaaaaaa ggatgatatt
     3061 tttatattaa aaacctcaaa tcatcaagaa taccatgcca aaagcgtagt tgtcaatgct
     3121 ggagcgcact ctttatattt agcacataaa atgaacttag gtatggataa gtcttgttgg
     3181 cctgttgcag gaagttttta tttaaccaaa caaaaacttt taaatggtaa ggtttatatg
     3241 gtgcaaaatc ctaaacttcc atttgcagct cttcatggag atcctgattt gcttgctgat
     3301 atgaacaccc gctttggacc taccgcactt gttattccaa aactagaacg ttatcatggt
     3361 ctaaaatcag ttccagaatt ttttgaagca ctaaaacttg ataaaactgt tttaaaagta
     3421 acttttaata tgtttaaaga tgcaacaatt agaaattaca tcttttataa ttatcttttt
     3481 gaactacctt ttgttgataa aagcttattt gttaaagatg ccaaaaaaat agtcccaagt
     3541 cttaaagcaa gcgatattta ttatgcgaaa ggttttggag gcgtaagacc gcaagttatt
     3601 gataaaacta aaggagaatt aatgctaggt gaagcaagca tcacagaaac ccctggtatt
     3661 attttcaata tgactccaag tcctggagca acaagttgtc taggaaatgc tgaaagagat
     3721 gcaaagcttg tatgtaatta cctaggaatg gaatttaacg aagataaatt ttcttcagaa
     3781 ttattgtaat cattttgttt ctatttttag ctacaataat ttcaaaagga gtttaccatg
     3841 cttaaaaaaa caaaaattgt agccacagta ggtccagcaa gtgaaaagga agaaattcta
     3901 cgccaaatga ttatcaatgg tgtaaatgtt ttccgtttaa acttttctca tggaacacat
     3961 gagtatcata aaaaaaactt agataccata agaagagtag ctaaagaatt gcatactcgt
     4021 attggaattt tacaagacat tagtggtcct aaaattcgta caggtgaact taaagaacca
     4081 tttgaattaa aaaagggtga tagacttgat ttttatcgtg aaacaatttt aggggagaag
     4141 attgctcaaa atcattataa aatcagtatc aatcaaaaat ccattttaga tatgttaaaa
     4201 attgatgaat atatttatct gtatgatgga tcaattcgtg ctaaagtagt aaatatagat
     4261 aatcaaaaaa ttgaaaccat tatagaaaat gatggttttt taaactcaaa taaaggtatt
     4321 aattttccga atactaaaat caatattgat gttattacac aaaaagataa aaatgattta
     4381 ctttggggta taaaaaatga agtagatttt ttagcaatat ctttcgtaca aaatgcgcac
     4441 gatattgatg aagttcgtga aattttagca caaaataacg caaaaatatc tatttttgca
     4501 aaaattgaaa aatttgatgc agtagaaaat attgatgaga ttattaaatc tagcgatggt
     4561 ataatggttg caagaggaga cttaggtatt gaggtacctt attataaagt tcctaatatc
     4621 caaaaagaaa ttatacaaaa agcaaacaat gcctctaagc ctgttattac tgcgactcag
     4681 atgctttttt cattagccaa aagcaaaacc gccacaagag ctgaaatttc agatgttgca
     4741 aatgctgttt tagatggaac agatgcagta atgctaagtg aagaaagtgc cgttggtata
     4801 gatcctgcaa acgctgttga tataatgtgc caaactataa tagaaacaga aaaacgctat
     4861 ccatataaca aatttaatga ttttaatgat ttagacaata cagataaaat catgcgttct
     4921 tcagctcatc ttgcaacaga tcttaacgct gatgctattt tttctttaac aagtagcgga
     4981 aaatctgcta ttaagattgc gagatatcgt ccaaatatag aaatcatagc agtagggcat
     5041 tctgaaaaaa ccttaaactc tttaagtata gtttggggag ttaatcctgc aatcttggtt
     5101 aacaaaagta atgaacttac agaattatta aaagactctg taagatcaag tgttgaaaaa
     5161 ggttttatgg atgaagataa atgctatctt ctaactgcag gctttccaac aggagtagaa
     5221 ggtactagca atcttatccg cattctcaat aaagagcaaa ttgcttatta tctacaataa
     5281 aacattaaat tcctttgaaa ataaggaatt taatgtcctt ataaattttt taagtcaaaa
     5341 gtcgatataa attaaagcct cacacaaagg agcaaatatg caagtgaata ctttttcaaa
     5401 tatcgctagc atggcacgaa cacaagttag caataagaag gcagatgatg ctaaggaaaa
     5461 cacaaaagac aaaaatgttc aaagtgctaa ttctagcaag gatgtagata aaaataccct
     5521 tgaaaaatta aatgcacttg gtggaaaagg cattacacaa atttacctag ttcagtttca
     5581 acagcaaaca atgaatgctg taataggttc gagcaatgcc caaactggac tagatagtct
     5641 tttaaatggt gccaatttag atactgcgaa atctatactt acaaatattg attttgcatc
     5701 cttaggctac agtagcaaaa atccacttga tatgaataca gatgaacttc aacaacttgt
     5761 aagtgaagat ggtttttttg gagtggaaaa tacagccaat cgcatcgcgg attttgttat
     5821 taaaggcggt ggcgacgatg ttgaaaaatt gaaaaaaggt cttgaaggta tgaaaaaagg
     5881 atttgagcaa gcagaaaaaa tgtggggtgg agaacttcct caaatcagtc aaaatacaat
     5941 agatgcggca cttaaaaaag ttagcgatcg cattgatgaa ctaggcggaa aaactctaga
     6001 tcttcaagct taactaaaaa tgcttagaaa tttctaagca tttttagttg ttattaatat
     6061 caaaagtaaa aaattcactc ttaaaattat taggtaaagt tttatactga gatatcgcag
     6121 cttcatagtt ctttacttct tgatacaaca taccaagagc tgctttactc tctttgttat
     6181 ttttatctgt aagtttagaa agctgcaaaa gcgctatagc tgaatttgga ttatttgcac
     6241 ctacggctgc tacggctgct aaaaataaag ttttagtatc tttagctcca taatcatcaa
     6301 tcaaagaatt ataaagcgca taagcctcct cgtattgctg tgcaaaaata tccaaataag
     6361 ctaaagtttg taaaataccc tcatcttttg ctcctgaaac attaatcaac tctttaaatt
     6421 tctgtctttc taaatttaaa agccctgcaa tatgcattaa attaacataa aattccctag
     6481 ctatatttgg cccaccaaaa acactacgat aatcaagttt taaattttta aaatgaattt
     6541 gagcattttg agcatattct ttaatattta aatttgaatt taaagaatta aaatacaaaa
     6601 tatttgccaa aatatcttca ggcaactctg aacgcaattt agcaattttc acatctactt
     6661 gattattaag gttattattt ttagcaacaa tagcttcaaa aatcaaactc aaaggcgtat
     6721 ctttttttgt ttcatctaaa taaggaagca tagaaatata attattatta actaaaaata
     6781 acatactttt ttgcatatta gctttaaaat tagaatcagc agctatatta tcaagaattt
     6841 cattgtaaag tttagttgta tcaatatcaa ttaattttgc acaaaacata gcaaaagcac
     6901 ctgctaagta atttttagga ttaagatgat atgaacttga aaaatgctta taagcaagtt
     6961 cataattttg catttgggca taagttaaag ccaaattata atgtaaaata ctatgttctg
     7021 gataatcctt gataagtttt tgaaattctt ggttagcaag gcgtaacttc tgatttaatg
     7081 catagttaat aatattggca atttttacat tggtagatga aagagccttg cttatattaa
     7141 gataaattcc cgcatcagta ctatcatcaa cgaaatctgt aacattagct tttttaatat
     7201 ataaagcagc ctgcttacta tcaaaaacct gataaggtgc aaaataaaaa agcaaatcga
     7261 attgatcttt ttgttttttt agcaaatctt ttgaaaaaga attttgagca actgctatat
     7321 taaaaagatc cttatttaaa cgaacttgaa ttttataagt atctaaaatc ttatatctat
     7381 ctttatcgtt atcataagaa ttttgcaagc gcgctaacat atcttgataa tttcctgttt
     7441 taatatcaac caatgttaaa gccgccaaac tctgattaaa atctctttca attttcatcg
     7501 ctgtacttaa agcgacttta gctttagcat attctcctat tctagcgtat aaaagaccta
     7561 aagataaact agattcaaaa ttgccttgag aatttaattg ctgtatagcc ttggaatcaa
     7621 agtccatttt tgcataaatt ttagcagaca aatactttgc aacatcagaa tacggctcca
     7681 catctgttct ttgtaacatt tgtaaggcct cagggtaata tcctttgtaa taattaatca
     7741 agcttaaata ataatcatat aattttgatt ttccttcttt tggaagatac acttgagcta
     7801 aatcaatata atatctaaat ttttccttat cattaagctt taaagcacaa acagcagcat
     7861 tgatagcagc tacactttga ttttctccat tggctatagc tttcttgaag ctttcaaaag
     7921 cttcttggaa tttattctca ttcatttgag aaacgcctaa attataatta gataaagatt
     7981 cattatatac ggcaacttgc tcataaactt ttaaagcctg ttcaacctca ccctttaaat
     8041 ataaagcatt tgctttttgg atcataccat caattctttg catatcattg tatttatatg
     8101 attcatcagg cataataaca ggttgttcta aaggcttaga agctataata tctggtttaa
     8161 tttttccttc actaaaagtt aaataaaaaa gtgtaaaaac taaaatacaa ataatcccca
     8221 aagataaacc cacaagagac ataaacttac gatctttata ccaaggcgta ggctcttgac
     8281 tttcaacttc ttcaaaagtt gatacatctt caggcgcact ttctcttgta aatttaaaac
     8341 cactttcact attttcttga ggtaattctt ctggcaatga tgcaaattct tcatcttctg
     8401 gagcttgccc ctcttgccct ttaaatccct ctaaactctc atcaagtctt ggttgattta
     8461 agccatcttc gggtttttct agtattatat cttcttgttc agccatctat actctttaaa
     8521 aatatttttt caaaacatca ggaatatgaa tttttccttc tttatcttga taattttcca
     8581 taatcgctac caaggttctt cctactgcca aagatgagcc attaagagtg tggacgagtt
     8641 cattttttcc ttgttcgttt ttatagcgaa ttttagcgcg tcttgcttga aaatcacgac
     8701 aatttgaaac cgagctgatc tcacgatatt tattctgtcc tggaagccac acttcaagat
     8761 ctacagtttt tgctgcacta aaacccaaat ctccagtgca aagcatcaaa tgtctatgcg
     8821 ctaaacctaa agaactcagc aaatcacttg cacactcaag catttcatta aacacactat
     8881 cactttgctc aggtttagtg atacttacaa gctctacttt ttcaaactgg tgttgtctta
     8941 taatacccct tgtatcacgc cctgcactgc ctgcttcttt tctaaaacaa gcactataac
     9001 aagtcatttt tataggtaaa gtttcactcg ctaaaatttc tccgctgtaa agattggtta
     9061 ctggaatttc agaagttgag atcaaataca aatcctcatc atctacctta tacatatctt
     9121 ctttaaattt tggcaactga cccgtcccaa acatagtagc accatttacc aaaaaaggta
     9181 cattaacaaa ttcaaatcca cgacttctat taaaatctat catataattt accaaagcac
     9241 ggcttaataa agctccttca tttttaagca cacaaaaacg actttgtgaa atttttaccc
     9301 cacgcataaa atcaagccaa tttaaactct cgcctaattc aaaatgttct tttggagtaa
     9361 aatcaaagct aggtggattt aaaacttttt taagctccac attttcattt tcatcttcac
     9421 ccacaggcac acattcatca gggatatttg ggatggcatg agcgatttcc tcaagctcat
     9481 tttctaaagc atttacttta gcgctttgct cattaatttt gcttttattt tcgcttaatt
     9541 ttgcttttaa actttcttta tcttcggctg tagcaagctc tttactgaat ttattttgaa
     9601 aagcttgaaa ttcttccaag gctatttttt ctttttttaa acttgcaaaa agttcagcaa
     9661 gtttttttaa gatattttca tcaacttttt tattttttaa ctttttagcc acttcatcaa
     9721 aattattttg caaatttttt aaatctagca ttttctactc cttaaagtcc gattttttca
     9781 taaatttttt gcattttttc ttgggcgatt tttcttgctt ttgtcgcacc aaaatccaaa
     9841 atttctttca aatgcgaagg cttttctaaa agctcattat atttttctct tgcttcttta
     9901 aaataagcat ttacaagctc gtttaaatat attttaaaat gtccataacc ctcaccacct
     9961 ttttcatagc gtatttgtaa ttctttttgc cctgattcat ctaaaaaaag ctttgcgatt
    10021 ttaaaaatat tgcagttttc atgatctttt ggatcttcta aagcggtact atctgtaact
    10081 atggaagaaa tttgtttttt taaggttttt tcactgctaa aaatatctat agtattttga
    10141 taagatttac tcatttttgc tccatcagta cccacaacca cagctacttc ttcattaact
    10201 ctcgcttctg gaagggtaaa aatttcaccc cattcattat taacttttaa agcaatatcg
    10261 cgtgcgattt caacatgctg gatttgatct tttcctacag ggacaattcg tgtatcaaaa
    10321 agtaaaatat ctgccgccat taaaacagga taagaaaaaa gcccatgtga agcactaagt
    10381 cccttagcaa ctttatcctt gtaactatgt gcacgctcta ataaacccat aggagtaaat
    10441 tgcgataaaa tccaataaag ctccataact tccttaacat cactttgcaa ccaaaaaacg
    10501 cttttttgag gatctatacc aaggcttaaa aaagccgcag cagcttttaa ggaattttgt
    10561 ttaagttttt ctccatcttg agaagaagtc atggcatgat aattagcaat aaacataaac
    10621 atttggcttt tttcttgtgc atctaccatt tgcttaatcg caccaaaata attacctata
    10681 tgcaaatcgc cacttggctg aaggcctgtt aatactctca ttttatcacc tttttaatct
    10741 cgcttaaaag ctcatctata tttttatttt ctatatttaa aataaaattt gccttttgtt
    10801 catacttgct taaacgctca ttatataatt tttttgcttt aatttcatca taaaataaag
    10861 gtcttttaga aatttcatct ttgtctaaac gcttttttaa atattcaaaa tctgctttta
    10921 aataaataca aaaacctgct ttttctaaat ttgaaacatt aacaaaaccc ccacctgtag
    10981 caatacaagc tttctcacaa gaactaaaaa aatcagccat tttttgctct tgttctctaa
    11041 aaaaattttt ccctttttgt tcaaaaattt cactgacttt ttgattaaat ttttgttcta
    11101 ttaaaaaatc actatctaaa aaaacaagat ctaaatcctt agctaaagct cttgctaaag
    11161 tgctttttcc agaacccata aatcctataa aaacgatatt tttagctttc atcattttct
    11221 ttactgccct ttttacgcga agcaatcact aaaggcacac cttcaaaatt aaattctttt
    11281 ctgatttgat tttgtaaata acgcttatag ctaaaatgca aggccttagg acgattcata
    11341 ataagtgcaa tttttggcgg tgctaagtca tattgtactg cataataaat tttaactaat
    11401 ttcccataat catgcggcaa aggatgtgct cttgtggcat tttctatcaa ggtattaagc
    11461 ttagaagttt ggattttttg agtgaaattt tcaaaaattt gcaaaatttt atcgagtaaa
    11521 acatgcaccc tttttccact taaagctgat acgctaatca cgggtgcgta agctagaaat
    11581 ttaaaacgat caagacgcaa ttcttttaca gtcttatcaa aatccatctc acttttatcc
    11641 catttattta aaacaataat cacacccaaa taatgcttag ccacaagccc agcaatgcgt
    11701 tcatcaagct cgttaaagcc ctcatgcgca tctaaaacca aaagtgctat ttgagaatga
    11761 gataaaattt tttccgtgcg atttagggca aagcgttcga gtccttgaat tttacccctt
    11821 tttctaatac ctgcagtatc aacaaattct atcactttat ctttatgaac tacactttca
    11881 ttaacaggat ctatagtagt tcctgcaata gaacttacaa cactgcgttc ttgtttaacc
    11941 aaagcattta aaagacttga ttttccaaca tttacacgcc ctacaatacc cactctgata
    12001 tgattttgat cgacttcttt aaattgaaat tcttttcctt cttcataata ctctaaaaaa
    12061 tcttctaaat tttcttcttc atcggggatt aaaaactctt catgtaaaaa tttttcaagc
    12121 cattcataaa gttcatctaa gcctacatta tgggttactg aaagattaaa gatttccttt
    12181 acgccaaaat ttgcaaactc ccaagccctt tcttcatctt ttttattatc tactttatta
    12241 atcactaagg ctataggttt tccaagtttt tttaaagaat aaaaaaactg tctatcctca
    12301 tcatcaggcg ctaatttccc atcaactaga taaagtatga tatcgctttc tttagctact
    12361 tttaaagtgt tttttttcac atttttaaaa agttcatcac tttcatcaag ccctccacta
    12421 tcaataagca tggctttttt tgaatgaata tgaatttgcg ttttatttgt atctctagtt
    12481 gtgcctgaaa tatcacttgt aatagctatt ctttgtcttg ccattctatt aaaaaggctt
    12541 gattttccca catttggctt acctataagt ataatgcttt gcattttttt cctagaaaat
    12601 tatattttta aaattatata aaatttggct taatattaag caaaaaaaga ctagaattaa
    12661 cccagatttt agtcaaggaa aaaaaatgct aaaagtaatc aagcataatt taggaattta
    12721 tttcatgatt ttagcatgtt tggattttgc acttatggga gcttgtgcaa aaattcttag
    12781 caaggaaatg agttctatag aaattatgtt ttttagaaat atcataggaa tttttttcat
    12841 agtctatctt ttaaaacgat ctaaggcaca taaagaaggg ggatattttt ggctcttggt
    12901 atttcgtgga gtagtaggca cgctttcact atatatgttt ttctataatg tttcaaatat
    12961 tacactaggt ggagcttttg cttttcaaaa aactgctcct atttttatta ctttaatagc
    13021 ttttgttgtt tttaaagaaa atattggcat caaaggctgg ataggaattt taatagcatt
    13081 tggtggagtg cttttaatcg ctcagccttg ggctcataat ttaaatcatt caggctttga
    13141 tttaaaaaat tcagttatag gtatcacgag tggattttta gccgctttag ctcttacaag
    13201 tgtaagagaa cttagaaaat cttacactac agaacaaatt gccttttctt ttatcctttt
    13261 aggaacctta atgcctttaa tttctatgat cagtgctgaa ttttttgaac cacagcatct
    13321 tgattcttta catttagatt tcattctagc accttttgtg atgccaagtc ttacagcttg
    13381 gcttatcatt gccattatgg gaactttagg caccatttat caaattcatg tcactaaagc
    13441 ttatggtatc gctaaacaag caggagtggt tgccggagtt agttatcttg atgtagtatt
    13501 tagtatgata gttgggataa ttttgggaga taatttacca agtactatgg tttttttagg
    13561 tataataggc attatttttg gtggattaat tttagttaag aacaaaggaa aaaaatgaaa
    13621 aaaatgatac tcattgctgg tccttgcgtg atagaaagca aagatttgat ttttaaagtt
    13681 gctgaacagt taaaaaattt taatgaaaat ccaaatatag aattttattt caaatcaagt
    13741 tttgataagg ccaatcgcac aagtattaat tcttttcgag gtcctggtct tgaagaagga
    13801 ttaaaaattt tacaaagcgt aaaagatgaa tttggtatga aaatcttaac cgatatacac
    13861 gaaagtaatc aagcaaaccc tgtaagtgaa gtagctgatg tcttgcaaat tcctgctttt
    13921 ttatgtcgtc aaaccgattt acttgtagcc gcagcaaaaa ctaaggcaaa aattaatatc
    13981 aaaaaaggac aatttttaaa cccaagcgat atcaaataca gcgttaaaaa agttctacaa
    14041 acccgtggta tagaagatga aggctatgaa gctgctcaaa gaaatggtgt ttttgtagct
    14101 gaaagagggg ctagctttgg ctatggaaat ttagtagtag atatgcgttc tttagttatc
    14161 atgcgtgaat ttgctccagt tatttttgat gctacccata gcgtacaaat gccaggggct
    14221 gcaggtggaa gtagcggagg gaaaagcgaa tttgtagaac ctttagcaag agcggcagca
    14281 gccgtaggca tagatggctt tttctttgaa acacatatta atccttgcga ggctttatgc
    14341 gatggaccta atatgcttaa tcttacacgc cttaaaaatt gcgttaatac attactagaa
    14401 atacaaaata tcataaagga aaacaaatga atattattga aggaaaatta aatttagact
    14461 caaatacaaa aattgctatc attaatgcaa gatttaatca tatcatcaca gatcgccttg
    14521 tagaaggagc aaaagatgct tttttaagac acgggggcaa agaggaaaat ctaagcctta
    14581 tacttgttcc tggtgctttt gaacttccgt atgcgttaaa aaaagctata gaaagcaaaa
    14641 aatttgatgc aatttgttgc gtaggcgcag taattcgtgg ctcaactccg cattttgact
    14701 atgtttcagc agaaaccacc aaaggcatag ccaatgtgag tttaaatcat aatatccctg
    14761 taagctttgg tgttttaact acagatacaa tagaacaagc catagaaaga gctggaagca
    14821 aagcaggcaa taaaggcttt gaagctatga caactgtaat cgagatgtta aatttaagca
    14881 aggagcttta atggcaacgc gtcatcaagt tcgccaaagc gtcatctcct tactttatgc
    14941 ttttgaatta aattctcaaa acaacgtttt tgtagatgaa attttagatg aaaaaaaaat
    15001 acgcaatgaa caaaaaaatt ttactttaaa tttatataat ggaattttag ataatttaaa
    15061 caatattgat gaaaccttaa attcatttct aaatgataat caaattacag ctttaggaca
    15121 tgtagaaaga gctatactaa gacttggagc ttatgagtta ctttttaccg atactcctag
    15181 cgccattgtc atcaatgagg ctatagaact tgctaaagaa cttgctaatg acaattctcc
    15241 aaaatttata aatggagttt tagatgcctt aataaaggct aaaaaatgaa gctttgtgtc
    15301 gcacttgatc tttctacaaa agaagaatgc ttacaacttg ccaaagaatt aaaaaattta
    15361 gacatatggt taaaagtagg tttaagagca tatttaagag atggttttaa attcatagaa
    15421 gaacttaaaa aagttgatga ttttaaaata tttcttgatc ttaaatttca tgatattccc
    15481 aacactatgg cagatgcttg cgaagaagta tcaaaacttg gtgttgatat gatcaatatc
    15541 cacgcaagtg ctggaaaaat agccatacaa gaagttatga cacggcttag caaattttca
    15601 aaaagacctt tagttttagc agtttctgct cttacgagtt ttgatgaaga aaatttcttt
    15661 agtatttata gacaaaaaat tgaagaagct gtaattaatt tttcaaaaat atcctatgaa
    15721 aatggacttg atggtatggt atgctctgtt tttgaaagca aaaaaattaa agagcacaca
    15781 agttcaaatt tcttaaccct tactcctgga attcgtcctt ttggagaaac aaatgatgat
    15841 caaaaacgtg ttgctaatct tgcaatggct agagaaaatt tgagtgatta tatcgttgtg
    15901 ggaaggccta tatataaaaa tgaaaatcct agggctgtat gtgaaaaaat tttaaacaaa
    15961 atacacagaa aaaatataag cgaaaacgat atagagcaaa attatgaagt aattcagcaa
    16021 aaagaatggg atatgtgtaa tcactttgaa gaatggatta aaactcagcc tgataaagaa
    16081 catgctttaa aagaatttta tgctaagtgt gggataaaat attgaattat caacaattag
    16141 aatgcgatta ctttaatctt tacaatcagt ttcttagcgt ggattttcaa atttcattat
    16201 ttgaaaaaga tcataaaggt ttaattaaag attttatatt tttttattat caaattttaa
    16261 aacaaaaaga cttgagctac ttgcttgagg taagaaataa aatttccctg aaagtttata
    16321 attatatgca agagcactcc acttctccaa aagatttaag tcttatttgt ctaagagaaa
    16381 ataaacatat tgaatttttt caaatatttt acaaggctct cgcttatttt gtagccttta
    16441 gaaaaaaact tgatggagaa caaaaaatta aaaatttgat ttcaaatatc aatgactgtt
    16501 ttggctatca tttcttgaat tctgacttta acaatcttca aaattttcaa aaaagcgatt
    16561 tgttcacctt acctgaaaaa catcttaaat attttcactt cgccatgatt catctttgtt
    16621 tcatggtttt aaatccttta aattttaaag actctaatcg gcatcttgat aaagcgatta
    16681 attatcttgt cgatggaact tttgaaattt atgagctcat ctttaaagaa tattttttat
    16741 tgttttcaaa agataaagag ctcaaggatg aacttagaaa attaaaaaaa ttagaattta
    16801 aaattctaat gcaagaaact tcaaaaatta aactacttaa tcattataaa gaattttgcg
    16861 aagaaatatt ctacaatata gaacttgaaa aaatc
//
LOCUS       DAPIYB010000036        16765 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.036, whole genome shotgun sequence.
ACCESSION   DAPIYB010000036 DAPIYB010000000
VERSION     DAPIYB010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16765)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16765)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16765
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.036"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            100..1167
                     /locus_tag="RJ318_000914"
     CDS             100..1167
                     /locus_tag="RJ318_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7430799.1"
                     /translation="MNHLLILYNPYYQEDVIKQHLSILQEKSQVAFGKIKSKLNDQEK
                     QNSLEEIYQSTNEENFLQLFLSDYANLFVAKVVKISKNVDESLIPSYYKEKNLEVEDF
                     FIISDLRELVREDFSRLRDKFLANFITPNDHTYAIYGNNYTYPLPVRLKEECSYFLGD
                     EKHYLSVYKSKEYLAMQENFIRFVFGKRIFYLLHSDSISNIIHAELELLQSENDLLND
                     FTSIIVKYSKTLEYEIYAFAKKVLLKACMKDPSLYDLAYNVQGKSFILKDFFTQKPNL
                     GSIKFLLRHENIQCHLGKSLTQFINYPFSKSLTIIQEIRNEAVHAKAPSLNEVKKLRN
                     EILGIEGVSLLKSILTHKEIS"
     gene            1164..2036
                     /locus_tag="RJ318_000915"
     CDS             1164..2036
                     /locus_tag="RJ318_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HDV7430800.1"
                     /translation="MKEYDKLSIRLVQILSKFNNGESLSAQELAQEFNVDTRTIQRDL
                     NERLAFMPIKKENGRYVLESFALGKLSFKDIQNFATLSGIAELYPKLDQGFIVDLLSH
                     RVNKVLMVKNEGFQKVDYELFKDLSVAILKHNVLNFFYKDKERQIKPYKLVNYKGIWY
                     LLGDENDKLKHFNLDKISKLHTKNENFIPDEKLEEQIQNDPNIWLGESKEVILKLDKN
                     AKEYFFRKEILSNYQIIDKDETSYTLSTQVSYEDEILHLVKQWIPYIKILAPIELKIR
                     LEDILKSYLNNLSK"
     gene            complement(2058..2133)
                     /locus_tag="RJ318_000916"
     tRNA            complement(2058..2133)
                     /locus_tag="RJ318_000916"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2098..2100),aa:Met,seq:cat)
     gene            complement(2167..2241)
                     /locus_tag="RJ318_000917"
     tRNA            complement(2167..2241)
                     /locus_tag="RJ318_000917"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2207..2209),aa:Gln,seq:ttg)
     gene            2334..3353
                     /locus_tag="RJ318_000918"
     CDS             2334..3353
                     /locus_tag="RJ318_000918"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3,4-dihydroxy-2-butanone
                     4-phosphate synthase/GTP cyclohydrolase II"
                     /protein_id="HDV7430801.1"
                     /translation="MKFVSVEQAIKDLQAGKMLVMVDAEDRENEGDLIFPAQFSTQEK
                     VNFMIKEARGVVCVALDETLAKKFELPLMVPKNTSNHETAFTITVDAKDATTGVSAYE
                     RNMTIQIFADDNAKASDFVRPGHINPLIAKKGGVLERTGHTEGTVDLCKLAGLKGACV
                     ICEIVKDNGDMARREDLEIFCQKHDLNMIAVSDLIEYRLKHESLIKLEEKSQSVLAGF
                     KAEKFIFSDHNQTQHIAFCFKDIKKCENVKFHISGSDFELLTSDKFSKLLEQIKFLSE
                     NGGVIVFMQGEKSSTTQYKNYGIGAQILRYFGIEEIKLLSQSCDKDYIGLEGFGLNLK
                     ACNFN"
     gene            3365..3808
                     /locus_tag="RJ318_000919"
     CDS             3365..3808
                     /locus_tag="RJ318_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HDV7430802.1"
                     /translation="MTLKEQILNDIKEAMKQKDDFKRDSLRTLNAAFKQIEVDERIEL
                     DNERIYKIIASEIKKRKDAIELYLKANREDLAQKEQNEISLFEIYLPKQLSDEELTLA
                     LKQLIEELGVSSLKEQGLVMKEAKIKLGASVDGKRLNLALKELLQ"
     gene            3826..5526
                     /locus_tag="RJ318_000920"
     CDS             3826..5526
                     /locus_tag="RJ318_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HDV7430803.1"
                     /translation="MKELSGSAMICEALKEENVKIVFGYPGGAALNIYDEIYNQKYFK
                     HILVRHEQAALHAADAYARMSGEVGVAIVTSGPGFTNTITGLATAYSDSIPLVLISGQ
                     VANSLIGTDAFQEIDAVGISRPCVKHNYLVTCIEEFPRILKEAFYIARSGRPGPVHID
                     VPKDVSATLGLWEYSKEISMKTYKPVYKGNSKQIKKFAELLKEAKRPLFYLGGGCISS
                     NASEQIRELIKFTKIPAVETLMALGTLRSDDVFNLKMAGMHGSYAANMALSECDLLVS
                     VGARFDDRITGKTSEFAKHATIVHVDIDPSSISKIINAHYPIVGDIKEVLKELLEELK
                     KENFNTTFKEWHETLKRYNELYPLSYEDSNEILKPQWVIEECAKMAPDARIITDVGQH
                     QMWVAQFYPFNYPRQLATSGGQGTMGYSLPAALGAKLAVGEEVVINFVGDGSVLMNIQ
                     ELMTAYEYGIKAINIILNNAFLGMVRQWQSMFYKEHFSQTDLSTQPDFIKIAQGFGCE
                     GYEISNKEEFIQAFSQALKSDKTSLLNVKIDRFEDVLPMVPAGGAIYNMILPKAKDRQ
                     "
     gene            5523..5987
                     /gene="ilvN"
                     /locus_tag="RJ318_000921"
     CDS             5523..5987
                     /gene="ilvN"
                     /locus_tag="RJ318_000921"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDV7430804.1"
                     /translation="MRRVLSVIVLNEHGVLSRIVGLFSGRGYNIDSLTVAPLENKEFS
                     RINIVTSGNERTFEQIVKQLHKLIPTYKVIESEEFIDKEMALVKIPLNENLGGLDAVL
                     KAYNGTIANSNENFLFLMVADDANRIDNFLKTIKKYNPSDIVRSGSVLMEIK"
     gene            5984..6949
                     /gene="lpxD"
                     /locus_tag="RJ318_000922"
     CDS             5984..6949
                     /gene="lpxD"
                     /locus_tag="RJ318_000922"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDV7430805.1"
                     /translation="MKLSEIAEFLSLEYKGEDIEISALNSLLKANFTELTYCDGEKNT
                     KDIPHTGAAAILVSKEYENLVPKDTKALITQSPHLSFAFLSKLFAKPLISTAKEKVQN
                     IAKSARIMPNVYIGDNVNIGENVIIMAGAYIGDNVSIGDESIIHPNVVIYNDTKIGKK
                     CHLLANCVIGSDGFGYAHNKNGEHYKIYHNGNVVLEDFVEVGACTTIDRAVFDSTIIK
                     AGTKVDNLVQIGHNCNIGQNCIIVAQTGISGSSELGRNVIMGGQSATSGHLKIGDFST
                     IAARGGVSKNLEGGRVYGGFPIMLQKDWLKLQAKIAINFKEKSQD"
     gene            complement(6938..7966)
                     /gene="queA"
                     /locus_tag="RJ318_000923"
     CDS             complement(6938..7966)
                     /gene="queA"
                     /locus_tag="RJ318_000923"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDV7430806.1"
                     /translation="MNKDLLLSSYDYTLANELIANYPTNPKEDARLLVFDRKNKEIFH
                     TTFKNLQDFLPNCAIFFNDTKVIKARIYGNKASGGKIELFLHQPFLNSHNPLFLAQIK
                     GRIKKDEILYFKEDLKVRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPP
                     YIKREDEKSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIYHLTLHVGAG
                     TFKSVECENIQEHKMHSEFFNIPQQACEIIDSKQAILGVGTTVTRTIEYYTRTKTKNG
                     FCDLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYS
                     YGDAMLIL"
     gene            complement(7959..8696)
                     /gene="tatC"
                     /locus_tag="RJ318_000924"
     CDS             complement(7959..8696)
                     /gene="tatC"
                     /locus_tag="RJ318_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDV7430807.1"
                     /translation="MFEELRPHLIELRKRLFISVACIVVMFIVCFTLRSYILDILKAP
                     LIAVLPEVAKHVNVIEVQEALFTAMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKR
                     LVVPFVSFASIMFAFGACFCYFVVVPLAFKFLINFGLNEDFNPVITIGTYVDFFTKVV
                     VAFGLAFEMPVIAFFFAKIGLIDDSFLKRHFRIAVLVIFVFSAFMTPPDVLSQFLMAG
                     PLCGLYGLSILIVQKVNPAPKDKESDE"
     gene            complement(8689..9105)
                     /gene="tatB"
                     /locus_tag="RJ318_000925"
     CDS             complement(8689..9105)
                     /gene="tatB"
                     /locus_tag="RJ318_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HDV7430808.1"
                     /translation="MSFGEIIVILVVAILVLGPDKLPEAIVQIAKILKAVKRNIDDAK
                     SSIEKEIRINDLKEEAKKYKDEFSSTNENIRKKLSFEEFDDLKRDILDKTKVDLTFDS
                     RDDKVKNNLSGQNLNTEEKPNLSKLETQDKNGKINV"
     gene            complement(9163..10230)
                     /locus_tag="RJ318_000926"
     CDS             complement(9163..10230)
                     /locus_tag="RJ318_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HDV7430809.1"
                     /translation="MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIVFQLK
                     QFNIQSNQIKTLFIGGGTPSCVNAYNYEDIFKILYPLLDKNVEISCEANPNSATLNWL
                     KNMKNLGVNRISFGVQSFHPKKLHFLGRIHNQEMIIKTLENANKVGFKNINLDLIYDT
                     KLDNKKMLEFELLHLKQIKDLITHLSAYNLTIESNTAFAKKEHFKKNAPNLMKFFIKQ
                     LLELDFFQYEISNFSKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKN
                     YIENPTFRSIEQLSSKDLNLEHLFLGLRSIVGIDETKLNQWQKNKINILLKEKKLFYK
                     NKRYFNPNFLISDELALYLSS"
     gene            10331..10801
                     /locus_tag="RJ318_000927"
     CDS             10331..10801
                     /locus_tag="RJ318_000927"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDV7430810.1"
                     /translation="MENEKNYRPNVAAIVLSSSYPFECKIFIARRSDMDNIWQFPQGG
                     IDKGESVKNALFRELKEEIGTDEVEIIAEYPEWLSYDFPSKIVKKMYPYDGQIQKYFL
                     VRLKHGVTININTKHPEFDDYQFVSVKQIFEMINHFKKNIYVKVIKYFEKKGYI"
     gene            10803..12005
                     /locus_tag="RJ318_000928"
     CDS             10803..12005
                     /locus_tag="RJ318_000928"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HDV7430811.1"
                     /translation="MLIVQKYGGTSVGTLERIEAVANRVIQSAQQGNQLVVVVSAMSG
                     VTNTLIEQAEYFSKTPNGKDMDMLLSSGERVTSALLSIALNEKGCPAISFSGRKAGII
                     TDSVFTKARIHHIDTKAIKSELQNGKIVVIAGFQGVDEEGNVTTLGRGGSDLSAVAVA
                     GALNADLCEIYTDVDGVYTTDPRIEPKAKKLDKISYEEMLELASLGAKVLQNRSVELA
                     KKLNVNLVTRSSFNNNEGTMITKEDGMEQALVSGIALDKNQARVTLRNVEDKPGIAAE
                     IFSVLANENINVDMIIQNVGVDGATNLGFTVPQNELELAKNAMQKILSSKTTIESDSA
                     VVKVSIVGVGMKSHSGVASKAFKALADEGINIGMISTSEIKISMIVHEKYGELAVRAL
                     HECYGLDK"
     gene            12006..12542
                     /locus_tag="RJ318_000929"
     CDS             12006..12542
                     /locus_tag="RJ318_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HobA family DNA replication regulator"
                     /protein_id="HDV7430812.1"
                     /translation="MSDFLSFTLENIRNGGAFMAWLESRRLEWAPLMAARLKYLLEGR
                     TFVLMCDEQRSWYEEYFLKNINSKATRPMLPFVSLNSLCKKKVQSSEDIALLNDLLDI
                     SFPNGYVYFYIGSASDNKSLIAKSRDDSLLWLFDEQLQDSFYLNSKDKDLDIKLISLY
                     QLFDVSLDAILFSKVQLG"
     gene            12548..13147
                     /locus_tag="RJ318_000930"
     CDS             12548..13147
                     /locus_tag="RJ318_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDV7430813.1"
                     /translation="MFISKIIISEDFLGIKEEMINNFGIKKLRFFIPQNEFLLDDARA
                     VEKESYIAETEEKIIVLMADSYRIEAQNFLLKLLEEPPKNIKFLIVIPSKNLLLPTIK
                     SRLICEKRKVEKEVKKLDLDLKRMDLRMLFDFLQKNENLDKNELMDQIALLAKECVKY
                     KDFNAEELEFFYESYELAKLNSKSGVLLATLLLNYYTKK"
     gene            13149..14291
                     /gene="folP"
                     /locus_tag="RJ318_000931"
     CDS             13149..14291
                     /gene="folP"
                     /locus_tag="RJ318_000931"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDV7430814.1"
                     /translation="MKFFKINPNTDFNLLCSFINPHKMGQKIMSEKTKIHFIFIKDIS
                     TPAANILKQDALRVGAELITHKEVITAKITHSNALLMASKEQIQKLVVKEKLQDFGLK
                     NLALFLQKDFLKPKKAELMAVINVNEDSFNAKSRVSEEDFEKRLNDFLALKPEYIDIG
                     AVSSRPGSEYCGKEEEFKRLKKVLDLIYEKNYYEQAIFSLDSFDEYCLEYALNKGFKL
                     INDITSLRNLNLAKLASKYGAKYCLMHMQNNPNNMQDNPFYEDLLDEMTLFFKEKLEL
                     LESFGVKESILDVGIGFGKSAGHNMILIKHLEHFLQFNKPLLIGASRKSVINAYFQSE
                     IKDRLAGTLYLHLKAFENGASIIRVHDLYEHKQLFALAQAMDNIGV"
     gene            14292..16235
                     /gene="ligA"
                     /locus_tag="RJ318_000932"
     CDS             14292..16235
                     /gene="ligA"
                     /locus_tag="RJ318_000932"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDV7430815.1"
                     /translation="MKKEEYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRVFE
                     EQNKDEISKDSPTQKIAPTIQSEFKKIAHLKRMWSMEDVFDESELRAWAKRAKCEKNF
                     FIEPKFDGASLNLLYENGKLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIR
                     GEVVILKDDFEKINEKRALLNQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGE
                     NTLNFTKHSEVMQFIRELGFLKDDFVRLCANLDEVLKAYDELLALREKKPMMMDGMVV
                     RVDDLALCEELGYTVKFPKFMAAFKFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVN
                     LDGVVVKSATLHNFDEIARLDVKINDFVSVIRSGDVIPKITKVFKERREGLEMEISRP
                     KLCPTCQSELLDEGTLIKCQNIDCEDRLVNSIIHFVSKKCLNIDGLGENIVELLYKHK
                     KITTLESIFHLKFNDFEGLEGFKEKKINNLLNAIEQARECELFRFITALGIEHIGEVA
                     AKKLSLSFGKEWYKQSFEAYANLEGFGEQMALSLCEFTRVNRTRIDEFYKLLNLKIEK
                     LEIKSDGVIFGKTFVITGTLSRPRDEFKALIEKLGGKVSGSVSKKTDYVLFGEEAGSK
                     LSKAKELEVKCIDESAFNELVKE"
     gene            16216..>16765
                     /locus_tag="RJ318_000933"
     CDS             16216..>16765
                     /locus_tag="RJ318_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430816.1"
                     /translation="MSLLKNSSYILTLLSLFGFLLTWQRSAFSLFFLISIFLTLFWEF
                     FLFLKLRKNIIKEATLIKGSLFYRVSMGDFYLYIFSFFLAIFGLVSLFLNFLNLEKID
                     FVFIFIILPLLMIFLKKELHLQFVDNAYNDFRIVVIASFFTALFYAFYGLFFTYNELL
                     NLELFSRKIIAYKSASFVYFDFL"
BASE COUNT         5965 a         2140 c         3070 g         5590 t
ORIGIN      
        1 aaaattagaa aaatatctag atgacacttg taaaatttta ttaattgaag ctcataataa
       61 atctaagcct tttaaagaaa tcctaaaata aggcaaagca tgaaccacct tttaatcctt
      121 tataatccct actatcaaga agatgtcatc aagcaacatt taagcatttt acaagagaaa
      181 tcccaagttg cctttggcaa aatcaaatca aaactcaacg atcaagaaaa gcaaaattcc
      241 ttagaagaaa tttaccaaag tacaaatgaa gaaaatttct tgcaactctt tttaagcgat
      301 tatgctaatt tatttgtcgc taaggtggta aaaatttcta aaaatgttga tgaaagtttg
      361 attcctagtt attataaaga aaaaaattta gaagtggaag acttttttat tattagtgat
      421 ttaagagaat tggtcaggga agattttagt cgtttaagag ataaattttt agccaatttc
      481 atcacaccaa acgatcacac ctatgctatc tatggcaata attacaccta tcctttgcct
      541 gtgagattaa aagaagagtg ttcttatttt ttaggagatg aaaagcatta tctaagtgtg
      601 tataaaagca aagaatacct agccatgcaa gaaaatttca tacgctttgt ttttggcaaa
      661 aggatttttt atctcttaca ctctgatagc ataagcaata tcattcatgc agaattagag
      721 cttttgcaaa gcgaaaacga tcttttaaat gattttacaa gtattatagt caaatactct
      781 aaaaccttag aatatgaaat ttacgctttt gccaaaaaag ttcttttaaa agcttgtatg
      841 aaagatccta gcctttatga tttagcttat aatgtccaag gcaaatcttt tatacttaaa
      901 gattttttta cccaaaaacc caatcttgga agtattaaat ttctactcag acatgaaaat
      961 atccaatgtc atttaggaaa aagtttaact caatttatca attatccttt ttcaaaaagt
     1021 cttactatca ttcaagaaat ccgtaatgaa gccgttcatg cgaaagcccc aagtttaaat
     1081 gaagtcaaaa aacttagaaa tgaaatttta ggcatagaag gcgtaagttt gttaaaaagc
     1141 attttaactc acaaggaaat ttcatgaaag aatacgacaa attaagtata cgcttggtgc
     1201 agattttatc aaaatttaac aatggagaaa gtctaagcgc ccaagagctt gcacaagagt
     1261 ttaatgtcga tacaagaacc atacaaaggg atcttaacga aagacttgct tttatgccta
     1321 ttaaaaaaga aaatggaaga tatgttttag aaagctttgc tttgggaaaa ttaagcttta
     1381 aagatataca aaatttcgcc accttaagtg gcattgctga gctttatcca aaactcgatc
     1441 aaggctttat agttgatctt ttaagccata gggtaaataa agttttgatg gtaaaaaatg
     1501 aaggttttca aaaggtggat tatgagcttt ttaaagatct tagtgtggct atactcaaac
     1561 acaatgtatt aaattttttc tataaggaca aagaacgcca aatcaaacct tacaaactcg
     1621 taaattacaa gggaatttgg tatcttttag gggatgaaaa cgataaatta aaacatttta
     1681 atttagataa aatttcaaaa cttcacacta aaaatgaaaa ttttatcccc gatgaaaaac
     1741 ttgaggaaca aatccaaaat gatcctaata tctggcttgg agaaagcaaa gaagtgattt
     1801 taaagcttga taaaaatgct aaggaatatt tttttagaaa agaaatacta agcaattatc
     1861 aaatcattga taaagatgaa acaagctata ctttaagcac tcaagtttcc tatgaagatg
     1921 aaattttaca tttggttaaa cagtggattc cttatataaa aattctagct cctatagaac
     1981 tgaaaatacg gctagaagat attttaaaaa gttatttaaa caatctatct aaataaaatt
     2041 tattttaaat ccttaactgg ttgcgaaggg gagatttgaa ctcccgacct tcgggttatg
     2101 agcccgacga gctaaccact gctctacttc gcggcatata agatctttga aatataaaat
     2161 aagaagtgga tggggtaaag ggattcgaac ccctgaatga caggaccaaa acctgttgcc
     2221 ttaccgcttg gcgatacccc aataaatatt ttttaaaagt gtgattataa tgaattttaa
     2281 tttatttgtc aagcaattta agttataatt ttaaaaattt taaggaaata aaaatgaaat
     2341 ttgttagcgt agaacaagcg attaaggatt tacaagcagg aaaaatgctt gttatggtag
     2401 atgcagaaga tagagaaaat gaaggcgatt taatctttcc tgcgcaattt agcactcaag
     2461 aaaaagtaaa tttcatgata aaagaagctc gtggtgtggt ttgtgtagcc ttagatgaaa
     2521 ctttggcaaa aaaatttgaa cttcctttaa tggtgcctaa aaatacttca aaccacgaaa
     2581 ctgcttttac tataaccgta gatgcaaaag atgctacaac gggagttagc gcctatgaaa
     2641 gaaatatgac tatacaaatt tttgccgatg ataatgctaa agcgagtgat tttgtaagac
     2701 caggacatat caatccttta atcgcaaaaa aaggtggggt tttagaacgc acaggtcata
     2761 cagaaggcac ggttgatctt tgtaaattag caggattaaa aggtgcttgt gtgatttgtg
     2821 aaattgtaaa agataatgga gatatggcaa gaagagaaga tctagaaatt ttttgccaaa
     2881 aacatgattt aaatatgata gccgtaagcg atcttataga atatcgccta aaacatgaaa
     2941 gccttattaa gcttgaagaa aaaagtcaaa gtgttttagc aggctttaaa gcagaaaaat
     3001 ttatctttag tgatcataat caaacccaac acatagcttt ttgctttaaa gatatcaaaa
     3061 aatgtgaaaa tgttaaattt catatcagtg gtagtgattt tgagctttta acttcagata
     3121 aattttcaaa acttttagag caaatcaaat ttcttagtga aaatggtggc gttatagttt
     3181 tcatgcaagg agaaaaatcc agtactactc aatacaaaaa ctatggtata ggagcacaga
     3241 ttttaagata ttttggtata gaagaaatta aacttttatc tcaaagttgt gataaagact
     3301 atataggttt agaaggtttt ggtttaaatc ttaaagcttg taattttaac taaaaaggaa
     3361 aaaaatgact ttaaaagaac aaattttaaa cgatatcaaa gaggcaatga aacaaaaaga
     3421 tgattttaaa agagatagtt taagaactct aaatgcagct tttaagcaaa tagaagtgga
     3481 tgaaagaata gagttggata atgaaagaat ttataaaatc attgcaagtg aaatcaaaaa
     3541 acgcaaagac gcaatcgaac tttatcttaa ggcaaatcgt gaagatttag cacaaaaaga
     3601 acaaaatgaa ataagtcttt ttgaaattta tctgcctaaa caactaagtg atgaggagtt
     3661 aactttagcc ttaaaacaac ttatagaaga attgggcgta agttcactaa aagaacaagg
     3721 tttggtaatg aaagaagcta aaataaaatt aggtgcgagt gttgatggca aaagacttaa
     3781 tttagcactt aaagagcttt tacaataatt ttttggagtg ttattatgaa agagttaagc
     3841 ggttcggcaa tgatttgcga ggctttaaaa gaagaaaatg ttaaaattgt ttttggttat
     3901 cctggaggcg ctgcgcttaa tatttatgat gaaatttaca atcaaaagta ttttaaacat
     3961 attttagtgc gtcatgaaca agcggctttg catgctgctg atgcttacgc aagaatgagc
     4021 ggagaagtgg gcgtagctat agttacaagc ggaccaggtt ttacaaatac tattacaggt
     4081 ctagctacgg cttatagcga ttctatccct ttggtgttga tttcagggca ggtggcaaat
     4141 tctcttattg gtacagatgc ttttcaagaa attgatgcag taggcatttc aagaccttgt
     4201 gtaaagcata attatttagt tacttgtata gaagagtttc cacgcatttt aaaagaggct
     4261 ttttatatag caagaagtgg tagacctggg cctgtgcata tagatgtgcc aaaagacgta
     4321 agtgcaactt tgggactttg ggaatactct aaagaaattt ccatgaagac ttataagccc
     4381 gtttataagg gtaactcaaa gcaaattaaa aaatttgcag agcttttaaa agaagcaaaa
     4441 agacctttgt tttacttagg tggaggttgc atcagttcta atgcaagcga gcaaatcaga
     4501 gagcttataa aatttacaaa aattccagca gttgaaactt tgatggcgct tggaacttta
     4561 agaagtgatg atgtttttaa tcttaaaatg gcaggcatgc atggaagcta tgctgctaat
     4621 atggctttaa gtgagtgtga tttgcttgtg agtgtaggag cgagatttga tgataggatt
     4681 acaggaaaaa caagtgaatt tgctaaacat gcgactatag ttcatgttga tattgatcct
     4741 agttctattt caaagattat caatgcgcat tatcctatag taggagatat taaagaagtt
     4801 cttaaagagc ttttagaaga gcttaaaaag gaaaatttca acacaacttt taaagaatgg
     4861 catgaaactt taaagcgtta taatgaactt tatccgcttt cttatgaaga tagcaatgag
     4921 attttaaaac cgcaatgggt gattgaagaa tgtgcgaaaa tggctccaga tgcaaggatt
     4981 attaccgatg tgggtcagca tcaaatgtgg gtagcgcagt tttatccttt taattatcca
     5041 agacaacttg caacaagtgg agggcaagga actatgggat attctttacc tgctgctttg
     5101 ggtgcaaagc ttgctgtggg tgaagaagtg gtgattaatt tcgtaggtga tggatcggtt
     5161 ttaatgaata tccaagagct tatgactgct tatgagtatg gtataaaagc tataaatatt
     5221 attttaaata atgccttttt aggtatggta agacaatggc aaagtatgtt ttataaagag
     5281 catttttcac aaactgattt aagcactcag cctgatttta tcaaaatagc tcaaggtttt
     5341 ggttgtgaag gttatgaaat ttcaaacaaa gaagaattca ttcaagcttt tagccaagct
     5401 ttaaaaagtg ataaaacctc tcttttaaat gtaaaaattg atcgctttga agatgtttta
     5461 cctatggtgc ctgcaggagg tgcgatttat aatatgattt taccaaaggc aaaggataga
     5521 caatgagaag ggttttatcg gtaattgttt taaatgagca tggggtttta tctcgtatag
     5581 taggactttt ttcaggaaga ggttataata ttgactcgct tacagtagca cctttggaaa
     5641 ataaagaatt ttctcgtatt aatatagtca cttcaggaaa tgaaagaact tttgagcaga
     5701 tagtcaaaca acttcataag ctcattccta cttataaagt gatagaaagt gaagaattta
     5761 ttgacaaaga aatggcttta gtgaaaattc ctttaaatga aaatttaggt ggacttgatg
     5821 ccgttttgaa agcttataat ggtactattg caaatagcaa tgagaatttt ttgtttttaa
     5881 tggttgctga tgatgcaaat cgcattgata attttttaaa aacaattaaa aaatacaatc
     5941 ctagtgatat agttcgcagt ggatctgttt tgatggagat taaatgaaat taagtgaaat
     6001 agcagaattt ttaagcttgg aatataaagg cgaggatata gaaatcagtg ctttaaattc
     6061 tttattgaaa gcaaatttta cagagcttac ttattgtgat ggtgagaaaa ataccaaaga
     6121 tatacctcac acaggagctg ctgctatttt agtatctaaa gaatatgaaa atttagtacc
     6181 taaagatact aaagctttga ttactcaaag tccacatttg agttttgctt ttttaagcaa
     6241 gctttttgct aaacctttga taagcacagc taaagaaaaa gtacaaaata tcgcaaaaag
     6301 cgcaagaatc atgcctaatg tttatatagg tgataatgta aatatcggtg aaaatgtaat
     6361 cattatggca ggagcttata taggcgataa tgtcagcatt ggtgatgaga gtattattca
     6421 tcctaatgta gtgatttata atgatactaa aatcggtaaa aaatgtcatc tgcttgctaa
     6481 ttgtgtaata ggaagtgacg gttttggtta tgcgcacaat aaaaacggcg aacattataa
     6541 aatttatcat aatggcaacg tggttttaga agattttgta gaagtggggg cttgtacaac
     6601 tatagataga gcagtttttg atagtactat tatcaaagca ggtactaagg tagataatct
     6661 agttcaaatc ggacataatt gcaatatagg tcaaaattgt atcattgtgg cacaaactgg
     6721 aatttcaggt tcaagtgagt taggacgcaa tgttattatg ggtggtcaaa gtgcaacgag
     6781 tggacattta aaaataggcg attttagcac tatagctgca agaggcggtg tgagtaaaaa
     6841 tttagaaggc gggcgtgttt atggaggttt tcctatcatg cttcaaaaag attggctaaa
     6901 acttcaagct aaaatagcaa taaattttaa agaaaaatca caagattagc atcgcatcgc
     6961 cataagagta aaagcgatat ttttctttta tggcgagttc ataaagtttt aaacactgtt
     7021 ctctaccgat aaaagctgaa actagcatga taagagtaga ttttggtaaa tgaaaattgg
     7081 ttaaaagatg attttgtctt ataggtggat tttgcgggtg taaaaaaaga tcacaaaaac
     7141 cattttttgt tttagttctt gtataatatt ctatggttct tgttaccgtt gttcctacgc
     7201 ctaaaatagc ttgtttagaa tctataattt cacatgcttg ctgcggaata ttaaaaaatt
     7261 cgctatgcat tttatgctct tgtatatttt cacattccac gcttttaaag gttccagctc
     7321 ctacatgcaa ggttaaatga taaatttcgt gtttttttct taaattttca agcatagtct
     7381 cactaaaatg taaacttgca gtcggagcag ccactgcgcc taaatttttt gcaaagatac
     7441 tttgataatc tttcaaatca cttttttcat cctccctttt aatataagga ggcaagggta
     7501 tatgtcctat cttgtcaagc aggttgtaaa gatttgaggt gtctaaggtt ttatcatttt
     7561 gaaaaaattg aacttttcga agaccatcat ttaaaagttc tacaacgcgt acttttaaat
     7621 cctctttaaa atataagatt tcatcttttt taatgcgccc tttaatttga gctagaaaaa
     7681 gcggattgtg agaatttaaa aaaggttgat gcaagaaaag ctctattttt cctccgcttg
     7741 ctttattgcc ataaattctt gctttaataa ctttggtatc attgaaaaaa atcgcgcagt
     7801 tgggtaaaaa gtcttgtaaa tttttaaaag tagtatgaaa aatttctttg tttttgcgat
     7861 caaaaaccaa aagcctagca tcttcttttg gatttgtagg atagttggct atgagttcat
     7921 tagctagagt gtaatcatag cttgaaagaa gtaagtcttt attcatcact ttctttatct
     7981 tttggagcag gatttacctt ttgaacaatt aaaatagaaa gtccataaag tccgcaaagt
     8041 ggtcctgcca ttaaaaattg agataaaaca tcaggtggag tcataaaggc tgaaaaaaca
     8101 aaaataacta aaacagctat gcgaaaatgg cgttttaaaa aactatcatc tataagtccg
     8161 attttagcaa agaaaaaggc aattacaggc atttcaaaag ctaagccaaa agccacaaca
     8221 actttggtaa aaaaatctac ataagttcct atggtaatca caggattaaa atcttcattt
     8281 aaaccaaaat taatcaaaaa tttaaaagcc aaaggcacta caacaaaata gcaaaaacaa
     8341 gccccaaagg caaacataat gctcgcaaag ctaacaaaag gcaccacaag gcgtttttca
     8401 ttatcataaa gtcctggagc tacaaatttc caaaattgcc aaaaaattac aggtagagaa
     8461 aagataaagg ctgcaaaaaa actaaccttc attgcggtaa ataaggcttc ttgtacttca
     8521 attacattta catgtttggc tacttcgggt aaaacagcta taagtggagc ttttagaata
     8581 tctaagatat agcttcgtag agtaaaacat acaataaaca taactacaat gcaagcaacg
     8641 cttataaaaa ggcgttttct aagttctatt aaatgaggtc ttaattcttc aaacatttat
     8701 ttttccgttt ttatcttgtg tttctaattt gctaagattt ggtttttctt ctgtatttaa
     8761 attttgtccg ctaaggttat tttttacttt atcatctctg ctatcaaagg ttaaatctac
     8821 ctttgtttta tctaaaatat ctctcttaag gtcatcaaat tcttcaaagc tgagtttttt
     8881 gcgtatattt tcattagtgc ttgaaaattc atctttgtat ttcttagctt cttcttttaa
     8941 gtcattgatg cgtatttctt tttctatgct tgattttgca tcatctatgt tgcgttttac
     9001 agcctttaga atttttgcta tttgtactat agcttctgga agtttatcag gtcctaagac
     9061 taaaatcgct acaactaaaa taactataat ttcaccaaaa ctcattaatc attactcttt
     9121 gatttgatat tttaataaat attttactta aaaaacttaa atttaagatg agagatataa
     9181 agcaagttca tcgctaatga gaaaattagg attaaaatat cttttatttt tgtaaaaaag
     9241 ttttttttct tttaataata tatttatttt gtttttttgc cattgattga gttttgtttc
     9301 atcaatccct actatacttc taagtcctaa aaataggtgc tctaaattca agtctttgga
     9361 acttagttgc tctatagatc taaaagtagg attttctatg taatttttta aattttttgc
     9421 tgtataaaaa cgcttatttt cataaaatcc tactgcactt aatccacaag ctaggtagtt
     9481 ttttccttgc caataagcaa gattatgttt gcaaatttgg gctttggttt ttgaaaaatt
     9541 actgatttca tattgaaaaa agtcaagctc tagaagttgt ttgatgaaaa atttcattaa
     9601 attaggagca ttttttttga aatgttcttt tttagcaaag gctgtgtttg attctatggt
     9661 taaattataa gcactaaggt gtgtgattaa atccttgatt tgttttaagt gtaagagttc
     9721 aaattcaagc atttttttat tgtctaattt cgtatcataa ataagatcta aattgatatt
     9781 tttaaaacct actttatttg cgttttctaa tgttttgata atcatttctt gattgtgaat
     9841 tcttccaaga aagtgaagtt ttttaggatg aaaactttga actccaaaag aaatgcgatt
     9901 aactcctaga tttttcatat ttttaagcca atttaatgtt gctgagttgg gattagcttc
     9961 gcatgaaatt tctacatttt tatctagtaa gggatataaa attttaaaaa tatcttcata
    10021 attatacgca ttaacacaac ttggtgttcc tccgcctatg aataaggttt taatttgatt
    10081 tgattgaatg ttaaattgtt ttaattgaaa aacaatatct tcttttaaag ccttaaaata
    10141 ggctttttca taatcatttt ttttcaaact tgtaaaagcg caataattac atttgctttc
    10201 acaaaatgga atatggatat aaaaatgcat aaaaacccta aaatatttta ttaaattttt
    10261 aatgtatttt aataaaaatt tgatttgatt taggttaaaa ttatatcctt gagatttaag
    10321 gaacaatatt gtggaaaacg agaaaaatta tagaccaaat gttgcagcta ttgttttatc
    10381 aagttcttat ccttttgagt gtaagatttt tatagctaga agaagtgata tggataatat
    10441 ttggcaattt ccacaaggag gtattgataa aggtgaaagt gtcaaaaacg ctttatttag
    10501 agaactaaaa gaagaaatag gcactgatga ggttgaaatc attgccgagt atccagaatg
    10561 gttgagttat gattttccga gtaaaattgt taaaaaaatg tatccttatg atgggcagat
    10621 tcaaaaatat tttttagtgc gtttaaaaca cggtgttaca atcaatatta ataccaagca
    10681 tcccgaattt gatgattatc aatttgtgag tgttaaacaa atttttgaaa tgattaatca
    10741 tttcaaaaaa aatatttatg ttaaagtgat caaatatttt gaaaagaaag gttatatcta
    10801 aaatgcttat agttcaaaaa tatggtggaa caagcgttgg aacacttgag cgtatcgaag
    10861 cagtagccaa tagggttatc caaagtgcgc aacagggtaa tcaacttgtt gttgtagtat
    10921 ctgcaatgag tggggtgaca aatactctta ttgagcaagc tgaatatttt agtaaaactc
    10981 ctaatggtaa agatatggat atgcttttaa gcagcggaga gcgtgtaaca agcgctttac
    11041 tttctatcgc tttaaatgaa aagggttgtc ctgctatatc attttctggg agaaaagcag
    11101 gaattattac agatagtgtt tttacaaagg caagaattca tcatattgat acaaaagcga
    11161 taaaatcaga acttcaaaat ggtaaaatag tcgttatagc aggttttcaa ggtgtagatg
    11221 aggaaggtaa tgtaactacc ttagggcgtg gtggaagcga tttaagtgct gtggcggtag
    11281 caggtgcttt aaatgcggat ttgtgtgaaa tttataccga tgttgatggg gtttatacaa
    11341 cagatccaag aattgaacca aaggcaaaga aattggataa aatttcttat gaagaaatgc
    11401 ttgaacttgc aagtttgggt gcaaaagttt tgcaaaatcg ctctgtagag cttgcaaaaa
    11461 aattaaatgt taacttagta actagaagta gttttaacaa taacgaagga acaatgataa
    11521 caaaggaaga tggaatggaa caagctttag taagtggtat tgctttggat aaaaatcaag
    11581 caagagtgac tttaagaaat gtagaagata agcctggaat cgcagctgaa attttttctg
    11641 ttttggcaaa tgaaaatatt aatgtagata tgattataca aaatgttgga gttgatggcg
    11701 ctacaaattt gggttttacg gttcctcaaa atgaacttga attagctaaa aatgctatgc
    11761 aaaaaatttt aagctcaaaa acaactatag aaagtgatag tgctgtagta aaagtttcta
    11821 tagtcggcgt aggcatgaaa tcacattcag gagtggcaag taaagctttt aaagctttag
    11881 ctgatgaggg gattaatatc ggtatgattt ctactagtga aataaaaatt tcaatgatag
    11941 ttcatgaaaa atacggagaa cttgcagtta gagcactaca tgagtgctac ggacttgata
    12001 aataaatgag tgatttttta agttttactc ttgaaaatat tcgcaatggc ggagctttta
    12061 tggcatggtt agagtcgcgt cgtttagaat gggctccttt gatggctgca agacttaaat
    12121 atcttttaga aggacgcact tttgtattaa tgtgtgatga acaaagatct tggtatgaag
    12181 agtatttttt aaaaaatata aattcaaaag ccactcgtcc catgctccct tttgtgtcgt
    12241 taaattcttt atgtaagaag aaagtacaaa gttcagaaga tatagcttta cttaatgact
    12301 tgcttgacat ttcttttcct aatggttatg tatattttta tataggaagt gcttctgata
    12361 ataaatcttt aatcgctaaa tcaagagatg atagtttatt gtggcttttt gatgagcagt
    12421 tacaagatag tttttattta aattctaaag ataaagactt ggatatcaag cttattagtt
    12481 tatatcaact ttttgatgta agtttggatg caatattatt ttccaaggtg caattaggat
    12541 aaatattttg tttattagta agattattat cagtgaagat tttttaggta ttaaggaaga
    12601 aatgattaat aattttggta ttaaaaaatt aagatttttt ataccacaaa atgaattttt
    12661 acttgatgat gcaagagcgg ttgaaaaaga aagctatatc gcagaaactg aagaaaaaat
    12721 tattgtttta atggcggatt cttataggat agaagcgcaa aattttttac ttaaactcct
    12781 tgaagaacct ccaaaaaata ttaaatttct tattgtgata ccttctaaaa atttactttt
    12841 acctactata aaatcacgtc ttatttgtga aaaaagaaaa gttgaaaagg aagttaaaaa
    12901 acttgattta gatcttaaaa gaatggattt aagaatgctt tttgattttt tgcaaaaaaa
    12961 tgaaaatttg gataaaaatg aacttatgga tcaaatcgca ttgcttgcta aagaatgtgt
    13021 gaaatataaa gattttaacg ctgaagaatt agagtttttt tatgaaagtt atgagcttgc
    13081 aaaattaaat tctaaaagcg gggtgctttt agctactctt ttattaaatt actatacaaa
    13141 gaaataaaat gaaatttttt aaaatcaatc caaacaccga ttttaatttg ctttgttctt
    13201 tcataaaccc tcataaaatg ggacaaaaga tcatgagtga aaaaacaaaa attcatttta
    13261 tttttatcaa agatatttct actcctgcgg caaatatttt aaaacaagat gctttaagag
    13321 taggagctga acttattact cataaagaag taattactgc aaaaatcact cattcaaatg
    13381 cgcttttaat ggcaagtaaa gagcaaattc aaaagcttgt tgtcaaagaa aaacttcaag
    13441 attttggact taaaaatttg gctctttttt tgcaaaaaga ttttttaaaa ccgaaaaaag
    13501 ccgagcttat ggcagtgatt aatgtcaatg aagacagttt taatgcaaaa agtcgtgtga
    13561 gtgaagaaga ctttgaaaaa aggcttaatg actttcttgc tttaaagcct gaatatatcg
    13621 atataggtgc ggtaagctca agacctggga gtgagtattg tggcaaggaa gaggaattta
    13681 aaagactgaa aaaagtactt gacttaattt atgagaaaaa ttattacgaa caagcaattt
    13741 ttagtttaga tagttttgat gaatattgtc tagaatatgc tttaaataag ggttttaaac
    13801 tcattaatga tattacaagt ttaagaaatc ttaatctagc caaacttgca agtaaatatg
    13861 gggcaaaata ttgcttaatg cacatgcaaa acaatccaaa taacatgcaa gataatcctt
    13921 tttatgaaga tttgcttgat gagatgactt tgttttttaa agaaaaactt gagcttttag
    13981 aaagttttgg agtaaaagaa agtattttag atgtaggtat tggttttgga aagagtgcgg
    14041 ggcataatat gattttaatc aaacacttag aacatttttt gcaatttaat aaacctttac
    14101 ttataggtgc gagtcgtaaa agtgtgatta atgcgtattt tcaaagcgag attaaagatc
    14161 gtttagcggg aactttatat ttgcatttaa aggcttttga aaatggtgct agtattataa
    14221 gagtgcatga tttatatgag cataaacaac tttttgcttt agcgcaggca atggataata
    14281 taggagttta gatgaaaaaa gaagagtatt tagaaaaagt tgctttagct aatttgtgga
    14341 tgagggcata ttatgaaaaa gatgaaccct tggctagcga tgaagaatac gatgctttaa
    14401 tcagagaatt aagagttttt gaagaacaaa ataaagatga aatttcaaaa gactctccaa
    14461 cgcaaaaaat agctcctact atacaaagtg agtttaaaaa aatagctcat ttaaagcgta
    14521 tgtggtcgat ggaagatgtg tttgatgaga gtgagcttag agcttgggca aaacgcgcaa
    14581 aatgtgaaaa aaactttttt atagagccta aatttgatgg agcgagttta aatttgcttt
    14641 atgaaaatgg taaattagta agcggcgcca ctaggggcga tggcgaagtg ggtgaggata
    14701 taacgcttaa tgtttttgag atagaaaata tacctaaaaa tatagcctat aaagaaagga
    14761 tagaaattcg tggagaagtg gtgattttaa aagatgattt tgagaaaatc aacgaaaaaa
    14821 gagccctttt aaatcaaagt ttatttgcca atccacgcaa tgctgcaagt gggagtttaa
    14881 ggcagcttga tacaagcatc actaaagaaa gaaatttgaa attttatcct tggggagtag
    14941 gggaaaatac cttaaatttc accaaacaca gcgaggtgat gcaatttatc agagagcttg
    15001 gttttttaaa ggatgatttt gtaagacttt gcgctaattt agacgaagtt ttgaaagctt
    15061 atgatgagct tttagctcta agagaaaaaa aacctatgat gatggatgga atggtggtaa
    15121 gagttgatga tcttgcactt tgtgaagaat taggctatac ggtaaaattt ccaaaattta
    15181 tggcagcttt taaatttcct gcgcttgaaa aaaccacgcg tttaataggg gtaaatttac
    15241 aagtaggaag aagtggagtg atcactcctg tggcagtttt agaacctgta aatttagatg
    15301 gggttgtagt aaaatcagcc acccttcata attttgatga aattgcaaga cttgatgtta
    15361 aaatcaatga ttttgtaagc gtgataagaa gtggcgatgt tatccctaaa atcactaagg
    15421 tttttaaaga gcgtagagaa ggtttagaga tggaaatttc acgccctaag ctttgtccta
    15481 cttgccaaag tgagcttttg gatgaaggaa ctttaataaa atgtcaaaat atagattgtg
    15541 aagatagact tgtaaattct atcattcatt ttgtttctaa aaaatgtctt aatatcgacg
    15601 gactgggaga aaatatagta gaacttttat acaagcacaa aaaaatcact acgcttgaga
    15661 gtatttttca tttaaaattt aatgattttg aaggtttgga aggctttaaa gaaaagaaaa
    15721 ttaacaatct tttaaatgcc atagaacaag caagagaatg tgagcttttt cgttttatca
    15781 cagctttagg aatagagcat attggcgagg ttgcggctaa aaaattaagt ttaagttttg
    15841 gtaaagagtg gtacaagcaa agctttgaag cttatgccaa tttagaaggt tttggagagc
    15901 aaatggcttt aagtctttgc gaatttacgc gtgttaatcg cacaagaatt gatgagtttt
    15961 acaagctttt aaatttgaaa atagaaaaac ttgaaatcaa aagcgatggt gtgatttttg
    16021 gtaaaacttt tgtgattaca ggcactcttt cacgcccaag agatgagttt aaggctttga
    16081 tagaaaagct tgggggtaag gtaagcggct cggtttctaa aaagactgac tatgtgcttt
    16141 ttggagaaga ggcaggttct aagcttagta aggctaaaga gcttgaagta aaatgtatag
    16201 atgaaagtgc ttttaatgag cttgttaaag aatagttctt atattttaac gcttttaagc
    16261 ctttttggct ttttgctaac ttggcaaagg agtgcttttt ctttattttt tttaatttct
    16321 atttttttaa cacttttttg ggaattcttt ttatttttaa agcttagaaa aaatattata
    16381 aaagaagcta ctttgattaa gggaagtttg ttttatcgtg ttagtatggg ggatttttat
    16441 ctttatattt ttagtttttt cttggcgatt tttggacttg tttctttatt tttaaatttt
    16501 ttaaatcttg aaaaaattga ttttgttttt atatttataa ttttaccttt attgatgata
    16561 tttttaaaaa aagaattgca tttgcaattt gtagataatg cttataatga ttttagaata
    16621 gttgttatcg ctagtttttt tactgcttta ttttatgcat tttatgggct tttttttact
    16681 tacaatgaac ttttaaattt agaacttttt tctaggaaaa tcattgccta taagagtgct
    16741 tcttttgttt attttgattt tttat
//
LOCUS       DAPIYB010000037        16393 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.037, whole genome shotgun sequence.
ACCESSION   DAPIYB010000037 DAPIYB010000000
VERSION     DAPIYB010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16393
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.037"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..395)
                     /locus_tag="RJ318_000934"
     CDS             complement(<1..395)
                     /locus_tag="RJ318_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlgG"
                     /protein_id="HDV7430817.1"
                     /translation="MITQTMQSKESKESKENSKISFANAFLKQNASKLNEIQNANSQT
                     LARSEALNSTNTTNTSNNTNFSISSKTSSPNYDISSEFKNSIYTLKYKQVDISNTSTN
                     TAYGYSVDKDGYMGSDFNKAAGLPEDFKI"
     gene            complement(512..1531)
                     /gene="flgS"
                     /locus_tag="RJ318_000935"
     CDS             complement(512..1531)
                     /gene="flgS"
                     /locus_tag="RJ318_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fla regulon two-component system sensor
                     histidine kinase FlgS"
                     /protein_id="HDV7430818.1"
                     /translation="MNESILKSLDSNEKETLQKGLESLIEQTYVIENEYKTLNENYNS
                     LRAMVDEIIEVLPSALWILDKEKNIILQNQEALKNPKLLSIISLDKIRDELEFEGRFY
                     AVKIIAHNEKTIVSATDISDEKRNERLASMGSVAAHLAHEIRNPIGSISLLASTLFAR
                     SELKNKHIVLEIQKAIARVERIVNSTLLFTKGVHINALNFNLLELKEECESAINSYNF
                     TSQIDFEISFLDKQICADKALLGLVLQNLIYNAIDAIEESECEKPMIKILASYDNEKI
                     CIRVYDNGCEIKDEKLVFEAFKTTKLKGNGLGLSLSKEIINAHKGELSFQSDPKNFYF
                     TLPLV"
     gene            complement(1535..2413)
                     /locus_tag="RJ318_000936"
     CDS             complement(1535..2413)
                     /locus_tag="RJ318_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7430819.1"
                     /translation="MLYKRKNIKFKNFVDLHKNLSLSKLFDFYSVFEGFEKLNILNFE
                     DDVFTNIERILLDDYLKIKSYFALDETSSYALTLLAKNNRKRFSINRKIQHFKALSTL
                     KYLLETGIIKLEYSKEAKKIKDKRQKIKKELRSYVVQDKIIFSNHFTRFFFYFLKPNE
                     KLILQNRYKEVLECIKEKFELYQSFCFEQLSRELLEKKFNINGVQSYWDKNLELDLYY
                     QDENLCFVGEVKFKNKKICKNILNLLKSKAKSLNLAPNYYIIISKNGFSKEIDKICEQ
                     NLLLLDLNDFKILLEE"
     gene            2449..3723
                     /locus_tag="RJ318_000937"
     CDS             2449..3723
                     /locus_tag="RJ318_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HDV7430820.1"
                     /translation="MYLQISDLKKELILKKGILHFDFTASALALKCVEKEILKILPTY
                     ANTHSDSSLNSFKTQQTYEQARKDIKKSLSLDENFALIACGTGSSSAIKKFQELIGIY
                     IPPLVKERYFTQIDKNTLPLVIVGPYEHHSNELSFREGLCECIRIPLDKNGEIDFDFL
                     EKTLQKNKKRKIIASFSLASNVTGILSDYKRISEMVRKFKGIVAFDASSFIPYKNISC
                     QYYDALFISSHKLIGGIGGSGLLAIKKDLCGNKPSFAAGGTVGYVSRTSQCYLCNEEA
                     LEEGGTPGILQLIRASLAFKIKDSIGVKNIEKKEEILKDYFFEKLKTIPNLILYAKNL
                     KTRLPIFAFNIKGISPFDIAYELSKKYHIETRAGCACAGPYGHDLLGLKDNQKLKTKP
                     GWLRISLHYTHEKEDIDYFFNALNKTIVKLSH"
     gene            complement(3720..4544)
                     /gene="purU"
                     /locus_tag="RJ318_000938"
     CDS             complement(3720..4544)
                     /gene="purU"
                     /locus_tag="RJ318_000938"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDV7430821.1"
                     /translation="MISVLKICTKDQKGLIYRISDVIFKYHINIVKNDEFVGEGMFFF
                     RALLEGEFDKEAFIGTLEAMLGQEALIELCEKRKKDIVVFATKESHCLGDLLIKHYSN
                     ELEANIKAVISNHNSLKDLVEKFEIPYHFISAENLDRKEQENQILKCLEQYKFDYLVL
                     AKYMRILSPDFVRHFEGKIINIHHSFLPAFIGANPYKQAFERGVKIIGATAHFVNNNL
                     DEGPIITQAVSPVNHEFTWQDMQQAGRNIEKDVLSKALDLAFEDRIFIHNNKTIIF"
     gene            complement(4541..5659)
                     /locus_tag="RJ318_000939"
     CDS             complement(4541..5659)
                     /locus_tag="RJ318_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HDV7430822.1"
                     /translation="MQISKISLKNNPDLQFIAEFLKPYTKRAYLVGGSVRDLFLGLKI
                     CDYDIELYDIKPKDFEKIMQKLGAQGFGKSFFVYKFKNYDLALARTENKISYGHKGFE
                     VQICNDEKLGAKRRDFTINSMMINLFNDEFLDFYGGLKDLGVGFLRHIDKQSFQEDSL
                     RVLRAVVFASRFNFKITSESLKLMQSMDITDLSKDRINAELCKFFKSPRLDVGYRYLQ
                     ELGLEKQVFGFESVFKSSEFQNLLRQSREFVKSDALFLYLYLNFFNLEKDIFFKRTKL
                     KKEYLKYANQAFYLDDISDFELAKIAFEMPLKEWLGLWSKKRIEQAKRLGLYENKFES
                     KILAKDFINAGFCGKILGLKLQEARENELKEYIKGLAK"
     gene            complement(5628..6119)
                     /locus_tag="RJ318_000940"
     CDS             complement(5628..6119)
                     /locus_tag="RJ318_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate:acceptor oxidoreductase"
                     /protein_id="HDV7430823.1"
                     /translation="MNLEDLAKKTISEVSSIMEEQRRQNEILKEQELNRKTEIKDELP
                     PMEFVCEELDTPQDLEDKISMAKFEEEQKIQNNIEISTQENKEFKKEEPFLQNEILNP
                     SVMTEVQTLNEDIFLKHLRERILVLFEGLNSIKKDDLENRLNLTINFLEFLLANIEDK
                     LKK"
     gene            complement(6116..6364)
                     /locus_tag="RJ318_000941"
     CDS             complement(6116..6364)
                     /locus_tag="RJ318_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDV7430824.1"
                     /translation="MMKNTVTEASIYEAQGLKDEALEIYKNILKEDPNNQNAIDAVRR
                     LSGFRSKHKDLNTQMLDFFINMKSDEEINEFKRWLIKI"
     gene            complement(6443..6616)
                     /gene="tatA2"
                     /locus_tag="RJ318_000942"
     CDS             complement(6443..6616)
                     /gene="tatA2"
                     /locus_tag="RJ318_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA2"
                     /protein_id="HDV7430825.1"
                     /translation="MVFLIPLLIIIGVIFGIDYVYFKNQDLKVQVKKEQKELNSSLEK
                     EKKEYIEKLFKTK"
     gene            complement(6629..6967)
                     /locus_tag="RJ318_000943"
     CDS             complement(6629..6967)
                     /locus_tag="RJ318_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HDV7430826.1"
                     /translation="MNNLSSVLILAKEEYINDLKKAISEIPFCSVELCENEKIIVVIE
                     SENLEDELNSYKMLEKLPNIISINMVFSYQDLNDDIQKAINSGAIETIEKNENAENVR
                     YYGSVFNQFS"
     gene            complement(6960..7874)
                     /locus_tag="RJ318_000944"
     CDS             complement(6960..7874)
                     /locus_tag="RJ318_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HDV7430827.1"
                     /translation="MKKFLFILSLFCVLSYAYELKLNANITALKLDKQNLYIGTDKGE
                     ILQYNIKDKSLKELLSLPKIKNYYGDDFAKIYNIDIFKHTLLILSEGDFGAKNLSFYK
                     ENLQIKKLEENSIIKAFFINENTYLLISIGSEIELIDKSLKNIKKFNFSHSSLNDAVL
                     NEDKSRLIAGFESGEVELFDLKNWKMLKNYDKMHKDNIYQVDFKNNVILSCGTDRRIG
                     VVKNEEQNFLQKDFLIYTCALSPSGEFAVYSDNEAGVSEVFSTSDFKPVKTFNNENLM
                     SEFIIFLNNKDFIVSGFGDSIMFRSIDE"
     gene            complement(7879..8403)
                     /locus_tag="RJ318_000945"
     CDS             complement(7879..8403)
                     /locus_tag="RJ318_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HDV7430828.1"
                     /translation="MMKKKLVLLGSAAVVFFAACAMNSGVSSEQIGLRKASLENENKV
                     NLVEANFTTLQPGESTRFERSYENAPPLIPHAIEDLLPITKDNNMCLSCHDKAIAADA
                     GATPLPASHYYDFRHNKTTGDMISDSRFNCTQCHVPQSDAKPLVGNSFKPEFKNEQLK
                     SRSNLIDVINEGVK"
     gene            complement(8400..9182)
                     /gene="napH"
                     /locus_tag="RJ318_000946"
     CDS             complement(8400..9182)
                     /gene="napH"
                     /locus_tag="RJ318_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HDV7430829.1"
                     /translation="MMKYLIARRIVQLGILALFSFKATDFILQGNLSSSRLFNTIPLS
                     DPFAVLQIILASWSIDLMALIGALIIFFIYGLLLGRVFCSWVCPVNLITDFAAFVRNK
                     LTLNNKFLILPKNLRYFVLVLVLVLSFVFSLPVFESFSYIGMIHRGIIFATSSWIFVA
                     FILFCIDTFLSPRAICSHFCPLGAFYAFISRFALLKIKHDSDKCTKCYECIRICPEKQ
                     VLWMVGKESTSVKSGECIRCARCIEVCNDDALNFNIFDLRNK"
     gene            complement(9179..9919)
                     /gene="napG"
                     /locus_tag="RJ318_000947"
     CDS             complement(9179..9919)
                     /gene="napG"
                     /locus_tag="RJ318_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HDV7430830.1"
                     /translation="MKGRREFFVSAFKAACLCTGGGFLANLALKADDNYALRPPGAEN
                     EARFLSKCIRCGLCVKACPYDTLKLASLLDSPKNGTPFFKAREIPCYLCKDIPCIREC
                     PTDALDKKHLEQGIESLKMGIAIVDSASCVAHWGIQCDACYRACPLIDRALKLELKRN
                     ERTAKHAFLLPSVDHEVCVGCGLCELACITEKPAIRVLPREYVLGKAGSHYVKGWDEK
                     DEGRIKNADTSKHFNVKKATNYLNDGEL"
     gene            complement(9937..12711)
                     /gene="napA"
                     /locus_tag="RJ318_000948"
     CDS             complement(9937..12711)
                     /gene="napA"
                     /locus_tag="RJ318_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HDV7430831.1"
                     /translation="MNRRDFIKNTAIASAASVAGLSVPSSMLGAQEEDWKWDKAVCRF
                     CGTGCGIMIARKDGKIVATKGDPAAPVNRGLNCIKGYFNAKIMYGEDRLVMPLLRMNE
                     KGEFDKKGKFQQVSWQRAFDEMEKQFKKAYNELGVTGIGIFGSGQYTIQEGYAALKLA
                     KAGFRTNNIDPNARHCMASAVVGFMQTFGVDEPSGCYDDIELTDTIITWGANMAEMHP
                     ILWSRVSDRKLSNLDKVKVVNLSTFSNRTSNIADIEIIFKPNTDLAIWNYIAREIVYN
                     HPEAMDMKFIKDHCVFATGYADIGYGMRNNPNHPKFKESEKDTVEKENVITLDDEEAT
                     SLSYLGVKAGDKFEMKHQGVADKNWEISFDEFKKGLAPYTLEYTARVAKGDDNESLED
                     FKKKLQELANLYIEKNRKVVSFWTMGFNQHTRGSWVNEQAYMVHFLLGKQAKPGSGAF
                     SLTGQPSACGTAREVGTFSHRLPADMVVANPKHREISEKIWKVPAKTINPKPGSPYLN
                     IMRDLEDGKIKFAWVQVNNPWQNTANANHWIAAAREMDNFIVVSDCYPGISAKVADLI
                     LPSAMIYEKWGAYGNAERRTQHWKQQVLPVGAAMSDTWQILEFAKRFKLKEVWKEQKV
                     DNKLTLPSVLEEAKAMGYSEDDTLFDVLFANKEAKSFNPNDAIAKGFDNTDVKGDERK
                     IQGSDGKEFTGYGFFVQKYLWEEYRKFGLGHGHDLADFDTYHKVRGLRWPVVNGKETQ
                     WRFNTKFDYYAKKAAPNSDFAFYGDFNKMLTNGDLIAPKDEKEHSIKNKAKIFFRPFM
                     KAPERPSKEYPFWLATGRVLEHWHSGTMTMRVPELYRAVPEALCYMSEKDGEKLGLNQ
                     GDLVWVESRRGKVKARVDMRGRNKPPVGLVYVPWFDENVYINKVTLDATCPLSKQTDF
                     KKCAVKIYKA"
     gene            complement(12958..13485)
                     /gene="tpx"
                     /locus_tag="RJ318_000949"
     CDS             complement(12958..13485)
                     /gene="tpx"
                     /locus_tag="RJ318_000949"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDV7430832.1"
                     /translation="MSIVNFKGNPVKLKGNSVEVGADAPKVNLKAKDLSVIEIGAAGK
                     TQIILSVPSLDTPVCATEAREFNKKVASYNGAEVIVVSMDLPFAMGRFCSTEGIENLS
                     VASDFVAKEFGEKYGVLINEGALEGLLARAVFVIKEGKVAYKELVNEITEMPDIAKLD
                     AFFGGSSCCGGCGCH"
     gene            complement(13584..14321)
                     /gene="peb2"
                     /locus_tag="RJ318_000950"
     CDS             complement(13584..14321)
                     /gene="peb2"
                     /locus_tag="RJ318_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcfC family adhesin PEB2"
                     /protein_id="HDV7430833.1"
                     /translation="MKKILILSLAASFLNAEILVYGPGGPAPVLKELALKFEEKTKEK
                     VIVTAGPTPAWVDKAKENADLIFSGNTSMMDDFAKKIPSLSLENLSVLNVRPSGIIVR
                     PNNPKNIKNFEDILKDGINVMVVDGAGQVGLYEDMALKSAKRENLVKLRKNIKIYAKN
                     SKAAVDEWNNNPNIDALIIWSHWAKALGDDKALFIKDKNAVIYRAAEIAPTKKGLENK
                     KALEFVDFIKSQEAQKVWKKYTWKEVK"
     gene            complement(14360..16390)
                     /locus_tag="RJ318_000951"
     CDS             complement(14360..16390)
                     /locus_tag="RJ318_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HDV7430834.1"
                     /translation="MPLSKLNNEQYLAATADFGHNLVIASAGTGKTSTIVARISYLLS
                     KGVAPQKIMLLTFTNKASKEMIGRLGKFFDKNITSKILAGTFHSTAYTLLRNADKNIA
                     LKQASELKTLLKSVYEKRTFRHLSDIKPYQSSYLYDLYSLFQNKAHNQDFYTWFCQNY
                     EDQSIYAEIYEDILKEYDNEKKRFNYVDFNDLLINLKDLLKEEKYEFDEILVDEYQDT
                     NTLQSSLIEAFHSKSLFCVGDYDQSIYAFNGADINIIGGFKDRFKDAKIFSLNKNYRS
                     SRSILALANKVILNNERLYPKELIVTRNDEFKAPSLLTFEELFDQYQNIAKMILTSGV
                     SLEEIAVIFRNNSSADGVEVALREQGIASVRKGSGSFFESLEVKAFSSMLALVVNPKD
                     IMAFIHLVQYTKGVGGVLAKEIFDALLKLGHGNLIKGFLDPDKNVNLQNHQKRNYQLG
                     LFADLEELASETRFKFESEFDAHPILRLSKINDLCARNLEKIYLFLKKAMEIKHSLTL
                     VNLICENSFYREICEELATKRATNKAGQVDLLRKSENLEKIETKFNVLKELTKNYSDI
                     YKYYNFLTLGASEMSSGKGVNLLSVHASKGLEFDLVFVIDLAQGRFPNQKLMGMGGSL
                     EEERRLFYVAVTRAKNILYLSYAKYDKNKKTSFAPSRFLIEAGLCKGELTID"
BASE COUNT         5502 a         3037 c         1956 g         5898 t
ORIGIN      
        1 tgtatcttaa aatcttcagg aagtcccgca gctttattaa aatcacttcc catataacca
       61 tctttatcta cactataacc ataggctgta ttagtagaag tattacttat atctacttgt
      121 ttgtatttta gagtataaat agagttttta aattcactag atatatcata attaggagaa
      181 cttgtcttac tacttatact aaaattagta ttattgctag tatttgttgt attagtagaa
      241 tttaatgctt cacttcttgc tagagtttgt gaatttgcat tttgaatttc atttaactta
      301 ctagcatttt gttttaaaaa agcattagca aaacttattt tagaattttc tttactttct
      361 ttactctctt tactttgcat agtttgagtt atcattgata ctaaagatac tcatattaat
      421 tccttgattt agattttttg ccttcaacct aaatatatta aaataatata agcaaaattt
      481 gttccgtttt ggggtgaaaa gaaaatattt atcacaccaa aggtaaggta aaataaaaat
      541 tcttaggatc actttgaaaa cttaactctc ccttatgagc gtttatgatt tctttagaaa
      601 gagacaagcc aagtccattg cctttaagtt ttgttgtttt aaaagcttca aaaaccaatt
      661 tctcatcttt tatttcacaa ccattatcat acactctgat gcatattttt tcattatcat
      721 aacttgctaa aattttaatc ataggctttt cacattcgct ttcttctatc gcatcaatag
      781 cattataaat caaattttgc aaaaccaaac caagaagagc tttatcagca caaatctgct
      841 tatccaaaaa agatatttca aagtctattt gagaagtgaa attataagag ttaatggcac
      901 tttcacactc ttcttttaac tctaaaagat taaaatttaa agcattgatg tgtacaccct
      961 tagtaaaaag tagagttgaa tttacgatac gctccactct agcaatagcc ttttggattt
     1021 caagaactat atgcttattt ttaagctcac tacgagcaaa aagggttgaa gcaagtaaag
     1081 atatagatcc aataggattt cttatctcat gtgccaaatg agccgctaca ctacccatgc
     1141 ttgcaagcct ttcattgcgt ttttcatcgc taatatctgt agctgaaact atagtttttt
     1201 cattatgcgc tatgattttt accgcataaa acctaccttc aaattcaagc tcatcacgaa
     1261 ttttatcaag actaatgata ctaagtaatt ttggattttt caaggcttct tgattttgta
     1321 aaataatatt tttttcttta tctaaaatcc aaagcgcact aggcaacacc tctataatct
     1381 catcaaccat tgcgcgtaag gagttatagt tttcatttaa agttttgtat tcattttcta
     1441 ttacataagt ttgttctata agactttcta agcctttttg tagggtttct ttttcatttg
     1501 agtctaaact ttttaaaata ctttcattca tttatcattc ctctaataaa atcttaaaat
     1561 cattcaaatc aagtaaaagc aaattctgtt cacatatttt atcaatttcc ttgctaaaac
     1621 cattttttga gattataatg taataatttg gagccaaatt taaagacttt gcttttgatt
     1681 ttaaaagatt taaaatattt ttacaaattt ttttattttt aaatttaact tctccgacaa
     1741 aacacaaatt ttcatcttga taataaagat caagttctaa attcttatcc cagtaacttt
     1801 gcactccatt gatattgaat tttttctcaa gtaattctct agaaagctgt tcaaaacaaa
     1861 aactttgata aagttcaaat ttttccttaa tacattctaa aacttcttta taacgatttt
     1921 gcaaaataag cttttcattg ggctttaaaa aataaaaaaa gaaacgagta aaatggttgc
     1981 taaatataat cttatcttgg acaacataag atcttagttc ttttttgatt ttttgtcttt
     2041 tatcttttat ttttttagct tccttactat actcaagttt tattatacct gtttctaaaa
     2101 gatatttaag tgtagataaa gctttaaaat gctgaatttt tctattgata gaaaaacgct
     2161 tgcgattgtt tttagctagt aaagtaagag cgtaagaact tgtttcatcc aaggcgaaat
     2221 aacttttaat ttttagataa tcatcaagca aaattcgctc tatatttgta aatacatcgt
     2281 cttcaaaatt taaaatgttt aatttttcaa aaccttcaaa cacactataa aaatcaaaaa
     2341 gcttacttaa agacaaattc ttatgcaaat ctacaaagtt cttaaatttt atatttttcc
     2401 ttttataaag catttttata gtataatttt agcaaatttt tataaggatt gtatttgcaa
     2461 atttcagatt taaaaaaaga attgatctta aaaaaaggta ttttgcattt tgacttcaca
     2521 gcaagtgctt tagctctaaa atgtgtagaa aaagaaattt taaaaattct cccaacctat
     2581 gcaaacacac attctgatag ctctttgaat tcttttaaaa ctcaacaaac ttacgaacaa
     2641 gcaagaaaag atataaaaaa aagtttatca ttagatgaaa attttgccct tatagcttgc
     2701 ggaacaggat caagcagtgc tattaaaaaa tttcaagaat tgatcggcat ttacattccc
     2761 cctcttgtaa aagaaagata ttttacgcaa attgataaaa ataccttacc tttagttatc
     2821 gtagggcctt atgagcatca ttctaatgaa ctttcatttc gagaaggctt gtgcgaatgt
     2881 attagaattc ccttggataa aaatggagaa attgattttg attttctaga aaaaacttta
     2941 caaaaaaaca aaaaaagaaa aataatcgct agcttttctt tagcttcaaa tgttactggg
     3001 atattaagtg attacaaacg catttctgaa atggttcgta aatttaaagg gatagttgct
     3061 tttgatgcat ctagtttcat tccctataaa aacatatctt gtcaatacta tgatgcgttg
     3121 tttataagtt ctcataaatt aatcggtggt attggcggtt ctggactttt agccatcaaa
     3181 aaagatcttt gtggaaacaa acctagcttt gccgcaggtg gaactgtggg ctatgtttct
     3241 cgcacttcac aatgctacct ttgcaatgaa gaagctttag aagaaggagg aacacctgga
     3301 attttacaac tcattcgcgc tagcttagct tttaaaatca aagattctat aggggttaaa
     3361 aatatagaaa aaaaagaaga aattttaaaa gattattttt ttgaaaaact aaaaactata
     3421 cctaatttaa ttttatacgc aaagaattta aaaacccgat tgcctatttt tgctttcaat
     3481 atcaaaggaa tttctccttt tgatatcgct tacgaactta gtaaaaaata ccacatagaa
     3541 acacgcgctg gatgtgcttg tgctgggcct tatggtcatg atttgctagg cttaaaagat
     3601 aatcaaaaac ttaaaacaaa accaggttgg ttaagaataa gcttgcatta tacgcatgaa
     3661 aaagaggata ttgattattt ttttaatgct ttaaataaaa ctatagtaaa attatcgcat
     3721 taaaatatta tagttttatt attatgtata aaaattctat cttcaaaagc caaatcaagt
     3781 gcttttgaaa gaacatcttt ttctatattt ctacctgctt gttgcatatc ttgccaagta
     3841 aattcatggt ttacaggcga aacagcttga gtgataatag gaccttcatc aagattatta
     3901 tttacaaaat gtgccgtagc tccaattatt ttaacccctc tttcaaaggc ttgtttataa
     3961 ggatttgctc ctataaatgc aggtaagaaa gaatggtgaa tatttataat cttgccttca
     4021 aaatgcctaa caaaatcagg agataaaatt ctcatatatt ttgccaaaac caaataatca
     4081 aatttatatt gttcaagaca ttttaaaatc tgattttctt gctctttacg atctaaattt
     4141 tcagcgctga taaaatgata aggaatttca aatttctcaa ctaaatcctt taaagagttg
     4201 tgatttgaaa tcacagcttt gatatttgct tcaagttcgt tactataatg ctttattagc
     4261 aaatctccca aacaatgact ttctttagta gcaaaaacaa caatatcttt ttttctcttc
     4321 tcgcaaagct ctatcaaggc ttcttgtcca agcatagcct caagcgttcc tataaaagct
     4381 tctttatcaa actcaccttc taaaagagca cgaaaaaaaa acattccttc acctacaaat
     4441 tcatcgtttt ttactatatt gatatgatat ttaaaaataa catcagaaat tctataaatt
     4501 aaaccttttt gatctttggt gcaaattttt aatacagaaa tcatttagct aaacctttta
     4561 tatattcttt taattcattc tctcttgctt cttgaagctt taaaccaaga attttaccac
     4621 aaaatccagc atttatgaaa tcttttgcta aaattttact ttcaaactta ttctcataaa
     4681 gccctaatct tttagcttgc tcaatacgct ttttactcca aagtccaagc cattccttca
     4741 aaggcatttc aaaagcaatt tttgctagtt caaaatcact tatatcatca agataaaaag
     4801 cttgatttgc gtattttagg tattcttttt taagtttagt tcttttaaaa aatatatctt
     4861 tttctaaatt aaaaaaattc aaatacaaat acaagaataa agcatcgctt tttacaaatt
     4921 ctctactttg tctgagtaaa ttttgaaatt ccgaactctt aaaaacactc tcaaagccga
     4981 aaacctgttt ctctaagcca agttcttgta aatatctata gccaacatca agtctaggac
     5041 ttttaaagaa tttacaaagc tccgcattga tcctatcttt gctaagatca gttatatcca
     5101 tactttgcat caatttcaag ctttcactag ttatcttaaa gttaaacctt gaggcaaata
     5161 ctactgctct taataccctt aaactatcct cttgaaagct ttgtttatca atatgcctta
     5221 aaaagcctac tcctagatct tttaatcctc cataaaaatc taaaaactca tcgttaaaaa
     5281 gattaatcat catagaattt atggtaaaat cgcgtctttt ggcgccaagt ttttcatcat
     5341 tgcaaatttg aacttcaaaa cctttatgtc catagcttat tttattttcg gttctagcaa
     5401 gagctaaatc ataattttta aacttatata caaaaaaact ttttccaaag ccttgtgcgc
     5461 ccaatttttg cataatcttt tcaaaatctt taggttttat atcataaagc tctatatcat
     5521 agtcgcaaat ttttaaacct aaaaacaaat ccctaacgct acctccaacc aaatacgctc
     5581 gtttggtata aggctttaaa aactcagcga taaactgtaa atcgggatta ttttttaagc
     5641 ttatcttcga tatttgcaag caaaaactct aaaaaattta tggtcaagtt taacctattt
     5701 tcaagatcat ctttttttat gctatttaaa ccttcaaaaa gaactaaaat tctctctcta
     5761 agatgtttta aaaaaatatc ctcattaagc gtttgaacct ctgtcataac actaggattt
     5821 aaaatttcat tttgtaaaaa aggctcttct tttttaaact ctttattttc ctgagtagaa
     5881 atttcaatat tattttgtat tttttgctct tcttcaaatt ttgccataga aattttatct
     5941 tctaagtctt gcggagtatc aagctcttcg catacaaact ccataggtgg taattcatct
     6001 tttatttcag tttttctatt taattcttgt tcttttaaaa tttcattttg tcttctttgc
     6061 tcttccatga tagagctaac ttcgctaatg gtttttttag ctaaatcttc caaattcata
     6121 tttttatcaa ccacctttta aattcattaa tttcttcatc gcttttcata ttaataaaaa
     6181 aatccaacat ttgagtgttt aagtctttat gcttggatct aaaaccacta agacgacgaa
     6241 ccgcatcgat agcgttttgg ttattcggat cttcttttaa gatattttta taaatttcta
     6301 aagcttcgtc ttttaaccct tgagcctcat agatagaagc ttcagtgact gtatttttca
     6361 tcactgtttc ctaaaatttt tctttaattc tagcaaaaag ctttttaatt tatctttaag
     6421 aaaataatat gatttttaat gcctattttg ttttaaacaa tttttctata tattcttttt
     6481 tttctttctc taagctagaa tttaattctt tttgttcttt tttaacttgc acttttaaat
     6541 cttgattttt aaaatacaca taatcaattc caaaaataac accaattata ataagcaatg
     6601 ggattaaaaa taccatatac tttacacttt aagaaaattg attaaacaca ctaccatagt
     6661 agcgaacatt ctcagcattt tcattttttt ctatcgtttc tattgcgcca ctattgattg
     6721 ctttttggat atcatcattt aaatcttgat aagaaaaaac catattaata ctgataatat
     6781 ttggcaattt ctcaagcatt ttataagagt ttaactcatc ttctaaattt tcactttcaa
     6841 tcacaactat aatcttttca ttttcacaaa gttctacaga acaaaaagga atttcagata
     6901 tagccttttt taaatcattt atatattctt cttttgctaa aatcaaaaca ctagaaagat
     6961 tattcatcaa tactcctaaa cattatacta tcaccaaagc ctgaaacgat aaaatcttta
     7021 ttgtttaaaa aaataataaa ctcactcatc aaattttcat tattaaaagt tttaacaggc
     7081 ttaaaatcac ttgtgctaaa aacttcacta actccagctt cattatcgct ataaacagcg
     7141 aattctccac taggacttaa agcacaagta tatatcaaaa aatctttttg taaaaaattt
     7201 tgttcttcat tttttacaac tcctatacgc ctatccgttc cacaacttaa aataacatta
     7261 tttttaaaat ctacttgata gatattatct ttatgcattt tatcatagtt tttcaacatc
     7321 ttccaatttt tcaaatcaaa aagttctact tcgccactct caaaacctgc aattagtcta
     7381 ctcttatctt catttaaaac tgcatcatta agactagaat gggaaaaatt aaattttttt
     7441 atatttttta aacttttatc aatcaattct atttcagaac caatagaaat caaaagataa
     7501 gtattttcat tgataaaaaa tgcttttatt atgctatttt cttcgagctt tttgatttgt
     7561 aaattttcct tataaaaact taaattttta gcaccaaaat caccctcgct aagtattaaa
     7621 agtgtatgtt taaaaatatc aatgttgtaa attttagcaa aatcatcacc ataataattt
     7681 ttaatctttg gcaaagataa aagttctttt aaacttttat ctttaatgtt atattgcaaa
     7741 atttcacctt tatcagtgcc tatatataag ttttgcttat caagctttaa agctgttata
     7801 ttggcattta atttcagctc ataagcataa gacaaaacac aaaaaagact caaaataaaa
     7861 agaaattttt tcatttattt actttacacc ctcattaatc acatcaatta aatttgaacg
     7921 actttttaat tgttcatttt taaattcagg tttaaagcta tttcccacta aaggttttgc
     7981 atcactttgt ggaacatgac actgagtgca attaaaacga ctatcgctaa tcatatctcc
     8041 tgtggtttta ttgtgtctaa aatcataata atgactagca ggaagtggag ttgcaccagc
     8101 atctgctgct atagccttat catggcagct taagcacata ttgttatctt tagttatagg
     8161 taacaaatct tcaatagcat gcggaattaa tggtggtgca ttttcataag aacgctcaaa
     8221 acgagtagat tccccaggct gtaaagttgt gaaatttgcc tccactaaat ttactttatt
     8281 ttcattttct aaacttgctt ttctaagtcc aatttgttct gaacttaccc cactattcat
     8341 tgcacaagcg gcaaaaaata ccactgcagc acttcctaat aaaaccaatt tcttcttcat
     8401 catttattcc ttaaatcaaa aatattaaaa ttcaaagcat catcattaca aacttctata
     8461 catcttgcac accttataca ctctcctgat ttcacgctag tactttcttt tccaaccatc
     8521 cacaaaacct gtttttcagg acaaatacgg atacattcat aacatttagt gcatttatca
     8581 ctatcatgct ttattttaag caaagcaaaa cgagaaataa aagcataaaa agctcctagt
     8641 ggacaaaaat gtgaacaaat tgccctagga cttaaaaaag tatcgataca aaaaagtata
     8701 aaggctacaa aaatccaaga acttgtagca aaaataatcc ctctatgtat cattcctata
     8761 taagaaaaac tttcaaacac aggcaatgaa aatacaaaag aaaggactaa aaccaagacc
     8821 aatacaaaat agcgtaaatt tttaggcaaa attaaaaatt tattattaag ggttaattta
     8881 tttcgcacaa aagcagcaaa atctgtgatt aaattaacag gacaaaccca agagcaaaaa
     8941 acccttccta aaagcaaacc atagataaaa aatataatca aagctcctat taaagccatt
     9001 aaatctatac tccagcttgc tagaatgatt tgcaaaactg caaaaggatc acttaaaggt
     9061 atggtattaa aaagtctaga agaacttaaa tttccctgca agataaaatc tgtagcttta
     9121 aaactaaaaa gcgctaaaat tccaagctga acgatgcgtc tagcaattaa atacttcatc
     9181 acagttctcc atcatttaaa taattggttg cttttttaac attaaaatgt tttgaagtat
     9241 ctgcattttt tatacgacct tcatcttttt catcccagcc ttttacataa tgagatcctg
     9301 cttttcccaa tacatactcc cttggcaaaa cacgaatggc cggtttttca gtaatacaag
     9361 ccagttcaca aagcccacaa cctacacaca cttcatgatc cacactaggt agtaaaaaag
     9421 catgtttggc ggtgcgttca ttgcgtttaa gctcaagttt taaagcccta tctatcaaag
     9481 gacaagctct ataacaagca tcacattgaa ttccccagtg tgccacacaa gaagcactat
     9541 caacaatagc aatacccatt ttcaaagatt ctataccctg ctctaaatgc tttttatcta
     9601 aagcatcagt tggacattct ctaatgcaag gaatatcctt gcaaagataa caaggaattt
     9661 ctcttgcctt aaaaaaaggc gtaccatttt ttggactatc taacaagcta gcaagcttta
     9721 aagtatcata aggacaggct tttacacaaa gcccacaacg aatacattta cttaaaaatc
     9781 tagcttcatt ttcagcccca ggaggacgca aggcataatt atcatcagct tttaaagcca
     9841 aattagccaa aaatccacct cctgtacata aacatgcagc cttaaaggca ctaacgaaaa
     9901 attctcttct acctttcatt taatcaaaac cctaaattaa gctttataaa tttttacagc
     9961 acatttttta aagtcagttt gttttgaaag cggacaagtc gcatccaaag taactttatt
    10021 gatatataca ttctcatcaa accacggcac atacacaagt cctacaggcg gtttgtttct
    10081 tccacgcata tctactcttg cttttacttt accacgacga gattccaccc aaaccaaatc
    10141 accttgattt aagcctaatt tctctccatc tttctcactc atatagcaaa gtgcttcagg
    10201 cacagcacgg taaagctcag gcacacgcat agtcatagtt ccactatgcc aatgctctaa
    10261 aacccttcct gttgcaagcc agaacggata ctctttactt ggtctttcag gtgctttcat
    10321 aaatggccta aagaaaattt tagccttatt tttaatactg tgctcttttt catctttagg
    10381 agctattaaa tccccatttg taagcatttt gttaaaatca ccataaaaag caaaatctga
    10441 atttggagcc gcttttttag cataataatc aaatttagta ttaaatctcc actgtgtttc
    10501 cttgccatta accacaggcc atcttaaacc ccttacttta tgataggtat caaaatccgc
    10561 taaatcatgt ccgtgtccta agccaaattt acgatattct tcccaaaggt atttttgaac
    10621 gaaaaagcca tagcctgtaa attcttttcc atcactgcct tgaatttttc tctcatcacc
    10681 tttaacatcg gtattatcaa agccttttgc gatggcatcg tttggattaa agctttttgc
    10741 ttctttattg gcaaatagca catcaaaaag tgtatcatct tcgctataac ccatagcttt
    10801 tgcctcttct aaaacgcttg gcaaggtaag cttattatcc actttttgct ctttccaaac
    10861 ttctttaagc ttaaagcgtt ttgcaaattc taaaatttgc caagtatcac tcatggcagc
    10921 acctacaggt aagacttgtt gtttccaatg ttgagttctt ctttcagcat taccataagc
    10981 accccatttt tcataaatca tagcgcttgg taaaataaga tcagctactt ttgctgaaat
    11041 tccaggataa caatcactta caacaataaa attatccatt tctcttgctg ctgcaatcca
    11101 gtgatttgca tttgcagtgt tttgccatgg attattcact tgcacccatg caaatttaat
    11161 ttttccatct tctaaatctc tcatgatatt aagataagga gaacctggtt ttgggttgat
    11221 agtctttgca ggaactttcc aaattttttc agaaatttct ctgtgttttg gattggctac
    11281 aaccatatct gcaggcaaac gatgtgagaa agttcctact tccctagctg ttccacaggc
    11341 acttggctgt cctgttaaag aaaaggctcc actacctggt ttagcttgct ttcctagcaa
    11401 aaaatgtacc atataagctt gttcatttac ccaagaacct cttgtgtgtt gattaaagcc
    11461 catagtccaa aaacttacga ctttgcgatt tttctctatg taaagattag ctaattcttg
    11521 aagttttttc ttaaaatctt ccaaagactc attatcatca cctttggcta ctcttgcagt
    11581 gtattctaaa gtataagggg ctaaaccttt tttaaattcg tcaaaagaaa tttcccagtt
    11641 tttatcagcc acaccttgat gtttcatttc aaatttatca cccgctttaa cgccaagata
    11701 agataaagaa gtagcctctt catcatctaa agtgattaca ttttcttttt caaccgtatc
    11761 tttttcactt tccttaaatt ttggatgatt tggattattt ctcataccat aaccaatatc
    11821 agcataacca gttgcaaata cgcagtgatc tttgataaat ttcatatcca tagcctctgg
    11881 atgattataa acaatctctc ttgctatgta gttccaaata gccaaatctg tatttggttt
    11941 aaaaataatt tcaatatcag caatatttga agtacggtta gaaaaagtgc ttagattaac
    12001 aactttaacc ttatcaagat tgcttagttt tctatcactt actcttgacc aaaggattgg
    12061 gtgcatttca gccatattag ctccccaagt gataatagta tctgtaagct ctatatcatc
    12121 ataacagcct gatggctcat ctacaccaaa agtttgcata aaaccaacca ctgcagaggc
    12181 catacaatgt cttgcatttg gatcgatatt atttgttcta aaacccgctt ttgcaagctt
    12241 taaagcagca taaccttctt ggatagtgta ttgcccacta ccaaaaatcc ctatacctgt
    12301 aacgccgagt tcattgtagg cttttttaaa ttgtttttcc atttcatcaa aggctctttg
    12361 ccaagaaact tgttgaaatt tgcctttttt atcaaattcg cctttttcat tcatgcgaag
    12421 caaaggcata acaagacgat cttcaccata catgatctta gcattaaaat aacctttgat
    12481 acaattaagt ccgcgattta cgggtgctgc aggatcacct tttgttgcta cgattttgcc
    12541 atcttttctg gctatcataa ttccacagcc agttccacaa aatctacaaa cagccttatc
    12601 ccatttccaa tcttcttctt gtgcaccaag catagagctt ggaacactaa gtcctgcaac
    12661 actagcagca cttgcaatag cggtattttt aataaaatcc cttctattca tccttattcc
    12721 tccaaaataa aaaaatcatc ttattataaa aaatggagta taaaaatctc ttgaaatttt
    12781 aataaaaata ataattttaa agctctattt tataggagtt ttattgtcct ttttatatta
    12841 ttcttacaca aaataaatat taaaaataat caacttaaca attaaaatat aatcaactta
    12901 aaataataaa aaaatgaaga tataaaaatt aagccctaag aatgggctta atcaaaatta
    12961 atggcaacca caaccaccgc agcagctaga accaccaaaa aatgcatcaa gttttgcaat
    13021 atctggcatt tctgtgattt catttacaag ttctttatat gccactttac cctctttaat
    13081 cacaaatacg gcacgagcta aaagcccttc taaagcacct tcatttatca aaacaccata
    13141 tttttcacca aattcttttg ccacaaaatc acttgcaaca cttaaatttt caataccttc
    13201 tgtactgcaa aatcttccca tagcaaaagg taagtccata cttactacaa tcacttcagc
    13261 accattgtaa ctggctactt ttttattaaa ttctctagcc tctgtagcac aaactggtgt
    13321 atctaaactt ggaacactta aaatgatttg agttttaccc gctgcaccga tttcaatcac
    13381 gcttaaatct ttagctttaa gatttacctt aggagcatct gctccaactt ctactgaatt
    13441 tcctttaagt tttacaggat ttcctttaaa atttactata ctcatttaat ttcctttttt
    13501 gatattttaa acattattgc aattaatgtt ttaggagtaa ttatatccta taaatattaa
    13561 ttatttttta atttcactca aaattatttt acttctttcc aagtatattt tttccacact
    13621 ttttgagctt cctgactctt aataaaatct acaaattcta aagctttttt attttctaaa
    13681 cctttttttg taggagctat ttcagctgca cgataaatca ctgcattttt atctttgata
    13741 aataaagctt tatcatcgcc taaagccttt gcccaatgag accaaatgat taaagcatca
    13801 atatttggat tgttattcca ctcatctaca gcagctttgg aatttttagc ataaattttt
    13861 atatttttac gtaattttac caaattttct ctttttgcac tttttaaagc catatcttca
    13921 taaagtccaa cttgtcctgc accatcaacc accataacat ttatgccatc ttttaaaatg
    13981 tcttcaaaat ttttaatatt ttttggatta tttggacgca cgataatacc tgatggacgc
    14041 acatttaaaa cgcttaaatt ttccaaactt aaacttggaa tttttttagc aaaatcatcc
    14101 atcattgaag tattgcctga aaaaatcaaa tctgcatttt cttttgcttt gtctacccaa
    14161 gctggagttg gacctgcggt tacaatcacc ttttcttttg ttttttcttc aaattttaaa
    14221 gcaagctctt ttagcacagg agcaggacca cctggaccat aaactaaaat ttcagcattt
    14281 aaaaaacttg ctgctaaact taaaattaat atttttttca taaaataaac ctttctttga
    14341 taatataaag gaaattgtat caatctatag ttaactctcc cttgcaaagc cctgcttcta
    14401 taagaaaacg agaaggagcg aaagaagttt ttttattttt atcatattta gcatagctta
    14461 aataaagtat attttttgcc ctagttactg caacataaaa aagccttctt tcttcttcta
    14521 agcttccacc cattcccata agcttttgat taggaaagcg accttgcgca agatcaatca
    14581 caaaaacaag atcaaattcc aagcccttac ttgcatgtac gctaagcaaa ttaactcctt
    14641 tgccactact catttcactt gcacctaaag ttaaaaaatt ataatactta taaatatcgc
    14701 tataattttt tgtaagctct tttaagacat taaattttgt ttctattttt tctaaatttt
    14761 cactctttct taataaatcc acctgccctg ctttgttcgt cgctctttta gttgcaagtt
    14821 cttcgcaaat ttctctataa aaagaatttt cgcaaattaa attgactaaa gtcaaagaat
    14881 gttttatttc catagctttt tttaaaaaaa gatagatttt ttccaaattt ctagcgcaca
    14941 aatcattgat ttttgaaagt cttaaaatag gatgtgcgtc aaattcactc tcaaatttaa
    15001 aacgagtttc gctagctaat tcttctaaat ctgcaaaaag cccaagttga taatttcttt
    15061 tttgatgatt ttgcaaattt acatttttat caggatctaa aaaacctttt attaaatttc
    15121 catgccctaa ttttaaaagt gcgtcaaaaa tttcttttgc taaaactcca cccacacctt
    15181 tggtatattg aaccaaatga ataaaagcca tgatatcctt aggatttacc acaagcgcaa
    15241 gcatggagct aaaagcttta acttccaaac tttcaaaaaa acttccactt ccctttctca
    15301 cacttgcaat gccctgctcc cttaaagcta cttcaacccc atcagcactt gagttgttgc
    15361 gaaaaatcac ggcaatttct tccaaactta ctccgcttgt aagtatcatt ttggctatat
    15421 tttgatactg atcaaataat tcttcaaaag taagcaaaga tggggcttta aactcatcat
    15481 ttcttgtaac aataagttct tttggatata atctttcgtt atttaaaatc actttattag
    15541 ccaaagctaa aatacttctt gatgaacggt agtttttatt taaagaaaaa atttttgcat
    15601 ctttaaaacg atctttaaac ccacctatga tattaatatc cgctccatta aaagcataaa
    15661 tactttgatc ataatcccct acgcaaaaca aacttttact atgaaaagcc tctattaaag
    15721 aactttgcaa agtatttgtg tcttgatatt catctactaa aatttcatca aattcatatt
    15781 tttcttcttt taaaagatct tttagattga taagcaagtc attaaaatcc acataattaa
    15841 aacgcttttt ttcattatca tattctttta aaatatcttc ataaatttca gcataaatac
    15901 tttgatcttc atagttttga caaaaccaag tataaaaatc ttgattgtgt gctttgtttt
    15961 gaaacaaaga ataaagatcg tataaataac ttgattgata aggttttata tcacttaaat
    16021 gcctaaaagt tcttttttca tagacacttt taagtagagt ttttaactcg cttgcttgct
    16081 ttaaggctat atttttatcc gcatttctaa gtaaggtata agccgtacta tgaaaagttc
    16141 ctgcaagtat tttactggta atatttttat caaaaaattt ccctaaacgc cctatcattt
    16201 ctttgctggc tttatttgtg aaagtcaaaa gcatgatttt ttgaggtgcc actcccttgc
    16261 ttaaaagata agaaattctt gcaacaatag tagaagtttt tcccgtccct gcacttgcaa
    16321 taacaagatt gtgtccaaaa tcagcagtag cggcaagata ttgttcatta tttaattttg
    16381 aaagtggcat tat
//
LOCUS       DAPIYB010000038        15898 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.038, whole genome shotgun sequence.
ACCESSION   DAPIYB010000038 DAPIYB010000000
VERSION     DAPIYB010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15898)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15898)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15898
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.038"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(42..2408)
                     /locus_tag="RJ318_000952"
     CDS             complement(42..2408)
                     /locus_tag="RJ318_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein"
                     /protein_id="HDV7430835.1"
                     /translation="MRILFLILLSFLNAFAFELVLNTGRENNQAFAVLHASNDLEFTC
                     QKFITEAKVHFECDIVGMVDNKLKDQSFSAFDLKFIQEAQKIKMIILPKIQARMFDTS
                     QNIYIDKELSSSSSHKSKAFTFIFTPELAPIKDYDGLDFNINFPHESLPYVGALDLNS
                     DPVVIPQSADINTYLRIKKEYDKANYNQVVIDAQNAINRYRGSIFTSEFILYKLRAQN
                     KLYTQDPSMRDQQILEKMIDDAKNWTRTFTSDKNFSEVLHIMLRTYIALAQRADVEYT
                     MSILDNEQPNNYFTQLSKLDYADYIYNLNEKEKAVNIYENTYFNTKNLDLAARAAMSL
                     AKNLLSNEQVNKAIEYINTILKANPEYFGKDIPRSLELAKLFNQKGQFDISASIYEDA
                     FAKMSKLDPSYEETLKDLALVLSHANRSSDAKKYLDLYMDDYLDGKYLDEIKKASDEV
                     FFALGDNNASFLHQRYTDLMKQYANKDENIANKALDEDVALYYKEGNFSAILAYKDLI
                     ESKKIPNATQFLEKAAINDLKNAIKADNCINAANIFMRFSAYDIGQKIENKKQMLACL
                     IRTSNVEQALDYIDKNYNEDSIFYGLQKASILFDNKQYPQVIKISKDIANSRILKSDD
                     ENFKAYYLQFLSLLRLNDYNQAIKILQILESFPMNFSMVEAYDALLSYANDHNMQTTI
                     LTYAPKAIDYQNFKGINLFSPNLEFIYLDALTKINKNEESLAVLTDLLKLKLSDEDRA
                     RALYIQALTYERMQNIQAEKESLKQCLEIKSASNWQNLCKSKNQILNQ"
     gene            complement(2430..3818)
                     /locus_tag="RJ318_000953"
     CDS             complement(2430..3818)
                     /locus_tag="RJ318_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HDV7430836.1"
                     /translation="MLNNFLNLELLNISLSYPFLFLITTAIVLLLCSGFWKFHRSFYI
                     GISSLSLIVSAFLILNNANAQGLEVKAFLATLNNDIVSFYASLVILCFSFLYLLMQKE
                     ENQGEFYALFLFMIASLLLMVSSSNLVLIFIGLESSSLALYTLIAMRGSDNAISSAIK
                     YFSVAAVGAGFFVMAVAFIYLKTGTLDLSANLALKNEFQKDPMLLGAGVMIFVLCAIK
                     LSLAPFHFWLKDVYYAAHTNLVAFISVVPKVAMLVVVIRLFDFLNNTGFEYIIIVLAI
                     FSMLIGAFAALSQNNIKKMFAYSSVVHSSLVLVACIPLLKEQNFDGILLAIFGYWTLF
                     AFANYAVFMILSNYENNSYESLNGLLVKKPLIAFCLSISVLSLAGIPPFGVFWGKFMI
                     LNTAILNGYWYLALFVALSSVIMLYAYLKILIHALFMKNDRVHNIKFSFIQNFILAFC
                     VCVSTFVILLML"
     gene            complement(3808..5295)
                     /locus_tag="RJ318_000954"
     CDS             complement(3808..5295)
                     /locus_tag="RJ318_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HDV7430837.1"
                     /translation="MLNYLIFFPLISAFVVLLLNRGGVKVFSVVVSFMILALNLDIFA
                     DFLQGVSFDYNLSFKILKFFSFHVGVDSIALVLILLSSLMIFLSFLFLKLEQKALISC
                     IFFLEFAIMGLFSAKDGLLFYVFWEFSLLPLLYIMGVYGKDFRAGVKFFIYAFAGSIL
                     MLVALIYQAYLNYQLLNIFTFDLEIWKNNASAVNFTEQLLLFGAFFIAFAIKAPLFPL
                     HTWAPKVYANSPILVSVMLVVFKMAPFGFLLFCLPLFPDASVYFMPLIVALCIVSIVY
                     NALIAYRAENIKELIAYSSISHLGVMILGIFSLNALGISGAVFYMFAHGIVTGALFLM
                     VELLYQRYHTYDISFYHSLAKKAPLFSIFFMLILLASVSLPLTVSFVGEFLILLGIAK
                     INLFYALLAGLVIILGAIYMFAVFRKIFFMQKQSFIEGFSLLFREIVALVCIVVMIFG
                     LGLMPNILLKPIQKDVDNLIKTMNIRAVEQNTLDFLSKIGEANVK"
     gene            complement(5297..7087)
                     /gene="nuoL"
                     /locus_tag="RJ318_000955"
     CDS             complement(5297..7087)
                     /gene="nuoL"
                     /locus_tag="RJ318_000955"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HDV7430838.1"
                     /translation="MQNLALISLFSPFVAFLFASCFALSEKKQFVGIICSLLVALSAF
                     CSLYLLFCNEAFNVSLFEWFAGVNFGFDIDAISLTMMSVVGIVATCVHFYSIFYMAHD
                     EGFNKFFAYLGLFVFSMLFLVMSDNFLGLFVGWEGVGLCSWLLIGFWYKNDTYSFAAN
                     EAFIMNRIADLGMLLGIFWLYLQAGTLKYDEVFSMAQSLDHNALILIATCLFIGAMGK
                     SAQFPFHTWLADAMAGPTPVSALIHAATMVTAGVYLVIRASTLYDLVPEVSYIIALLG
                     AFVAIFAASMALVVRDLKRIIAYSTLSQLGYMFVAAGLGAYGIALFHLATHAFFKSLL
                     FLGAGNVMHAMNDKLDIKKMGGLFKPLKITAILMCIGSLALAGIYPFAGFFSKDLILG
                     YSFISFHHGIFLVLLIAAFLTAFYSFRLLMLVFFTPARHDEHPHEASKIALLAMSPLM
                     VLAIIAGFFEHSFFEYLSTKLVFIDAQNQIVMICASVAAILGAILAIFAYKNSWFKES
                     IEENKIHKLLSNDYFIPQFYHQFIVSKYESLCAILKHCDLYIFDRIVEKIALYSQNIS
                     QKMIMPNSLNLMLRFLVAAFVILLILVWMV"
     gene            complement(7089..7385)
                     /gene="nuoK"
                     /locus_tag="RJ318_000956"
     CDS             complement(7089..7385)
                     /gene="nuoK"
                     /locus_tag="RJ318_000956"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HDV7430839.1"
                     /translation="MIEKYFFVAILMFVIGLVGILKRQNLIMLFISSEILLNSANLAL
                     VAASKMHNDLNGQVFALFIMGVAACEVAVGVALCVLWYRRKGTLELKSLKEVEA"
     gene            complement(7382..7900)
                     /locus_tag="RJ318_000957"
     CDS             complement(7382..7900)
                     /locus_tag="RJ318_000957"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HDV7430840.1"
                     /translation="MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGF
                     YFLLDAEFLGVIQIIVYSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFTLVVLSTIL
                     LLAMLIGFKYQNISTDLPLNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAI
                     VLTHKELTKEKQ"
     gene            complement(7897..8538)
                     /gene="nuoI"
                     /locus_tag="RJ318_000958"
     CDS             complement(7897..8538)
                     /gene="nuoI"
                     /locus_tag="RJ318_000958"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HDV7430841.1"
                     /translation="MKNYYLVDEKRKTPVSTWEKISQALRRSVKLELFVGLFVMMREL
                     LKRNNSATIKYPFEKVKLDNRYRAVHRLMRFIESENERCIGCGLCEKICISNCIRMET
                     SLDENGRKKVENYSINLGRCIYCGFCAEVCPELAIVHGTEYENAAEQRSYFGYKQDFL
                     TPIDKLKNQVEFEGAGSLRKDANLWVKKTPNYYDVMIERALENQNTQEQGENK"
     gene            complement(8548..9546)
                     /gene="nuoH"
                     /locus_tag="RJ318_000959"
     CDS             complement(8548..9546)
                     /gene="nuoH"
                     /locus_tag="RJ318_000959"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HDV7430842.1"
                     /translation="MSDFAFFALETLIKCIIIIAIFASLAGLATYAERKVLAYFQRRI
                     GPDMVGPFGLIQLVADMIKLFTKEDIIPSNSQKFIFAIAPLISAICAFVSLAAIPMLP
                     EFTLFGRVIQPIVADINVALLFVIGTSGLCFYAVFLGGLASNNKWSILGAARGLVSII
                     SYESVGALALIAIIMLVGSFSLVDINNYQSDGFFSWLIFKQPLAFVLFIIALFIETNR
                     TPLCLTENDAEIVAGYGTEYSGLRWGMFFIGEYTSMIAGAILVTLLFLGGFNSFWIIP
                     GWIMMIVKSSFIFFWYFWARAAFPQLRPDQVMKMCYLILIPLAVLNLLITALTVLL"
     gene            complement(9539..12001)
                     /locus_tag="RJ318_000960"
     CDS             complement(9539..12001)
                     /locus_tag="RJ318_000960"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HDV7430843.1"
                     /translation="MTVKINGIDCAFEEGEYILNIARRNDIFIPAICYLSGCSPTLAC
                     RMCMVEADGKKVYSCNTKAKEGMVVESDLQNLWDERNEIMQAYCINHPLECGVCDKSG
                     ECELQNFTHKSRVNVQKHWIKDTHKPHKHWGMINYDPALCIVCERCITVCKDKIGESA
                     LKTVPRGGDSVDNSFKESMGKDAYAIWTKFQKSLIGPANGDTLDCSFCGECTSVCPTG
                     ALIGSKFQYTSNIWELKRIPASNPHSSDCELMYYDIKQSGISNQKEKIYRVSNDFAFA
                     SLNKAARFAFDTQNEADKDEKAFKELVELFEKNEIKNIKFNSFITNEEALILQNLKKK
                     FNLSLINEEALKFKEFLQEFIANSGEFYSANTQDITKSDFLVVAGMLLRYDAPTLSYK
                     INNALVMNKGSGLYFHPMEDMGIAKYSKNFIPHIHKNGDEEQILYFLLQKFSQDEGIK
                     THLAEFFVSENKEIEESINEEVVEQVIEKDEEGNEIQKEVKKVVPKKVKKIIEVQRSV
                     FAKNLGIDEDKLEDLLLKKANFTLVVGSDFYFHKNAKKLAKLLALIQNTTPFKVFLNP
                     THTNTLGVAMICDLDNNTQEGKTLGYNEKGDFSFSYEEHANLASASLNQQEGTFLNYD
                     KRVVPTNAALEFKGYFLNDLANALGFDEEYTINYTKRLPINKGFSPIDFDHLDNFYTN
                     AGDCKRGYELNLECFKQVAKKEFISPNFENLSLKEDEILLYSANPSYQFGRFSNRASA
                     INEVIFLGVSENLAKEKNLKDKDLVKLKIKDKELSLSVRVDKDIKNGAFLPYFDEKLD
                     TLSFFDERFVVANLEKLGANHE"
     gene            complement(11998..12690)
                     /locus_tag="RJ318_000961"
     CDS             complement(11998..12690)
                     /locus_tag="RJ318_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430844.1"
                     /translation="MIYDNALCFLDMPSLKNKNLCEKIGVNSINISCLEDKNLKAKFY
                     KCEIASLSFVLALLCKLSDEGQFCDLDEGYLSAESCFGEEEAGEVLAFLKEVKYLIID
                     KNIHSYKDSENIKYFLNFLSVKYGLKILDSDEEECDFKKAKLNTLKELDNYDGLVLFR
                     ANLQDKNLHCSKQFLQIAKCKDQSEVEILAKDFSFKTKLCLDENLQGTIAFLNYENNG
                     FDFTPIRIKEAK"
     gene            complement(12687..12914)
                     /locus_tag="RJ318_000962"
     CDS             complement(12687..12914)
                     /locus_tag="RJ318_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase subunit E family
                     protein"
                     /protein_id="HDV7430845.1"
                     /translation="MRRVDLRKSKELFEDLAQIIKEAKQGEVLVVLFEIGDFSPVEKS
                     FSFVKEQGCELLNSLKFNQVDWTIVIKKERV"
     gene            complement(12911..14137)
                     /gene="nuoD"
                     /locus_tag="RJ318_000963"
     CDS             complement(12911..14137)
                     /gene="nuoD"
                     /locus_tag="RJ318_000963"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HDV7430846.1"
                     /translation="MQIPSKLKPYYENIAFEQEDSKMIINLGPQHPSAHGNLRLILEL
                     DGEQVVKARPCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLC
                     GLEIPRRAAVIRMILLELNRITSHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKY
                     CGARLTHSSMRIGGVMLDLPENYLEEMLAFCDKFPNDLKDYEDLLDDNRIWRLRTENV
                     GVVTKEQALNWGCTGVMLRGSGIKYDIRKEEPYLLYNEVEFGVPYATQGDSYARYKVY
                     MQEFRESLKILRQCAMLYKDTSPEILATHPEYVSASKEQILTQNYSLMQHFVLITQGL
                     KPPKGEVYVPTESPKGELGFFIHSDGTGRPYRLKARTPSYWHCAFFEEMLVGTYLADV
                     VAIMGNVNIVLGEIDR"
     gene            complement(14139..14933)
                     /locus_tag="RJ318_000964"
     CDS             complement(14139..14933)
                     /locus_tag="RJ318_000964"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HDV7430847.1"
                     /translation="MMRKYSDKKNAQTQNYYKDRFYHAPHTVKSDVNESVFKEDFEVL
                     KTQVEILNSFVELDFWVIEIKKEDNVKTLQMLKTLGYLSFTEASAIDFIADKNGFEVF
                     YQLLNLEKKLRVRIKTFVGVKERLQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRI
                     LMPDDWFGHPLLKTYPLKGDEFARWYEIDKIFGKEYREVVGEEQRDSGFADDKDTLNF
                     ARLYHEVPKGGQKKEISFKQEYQEDEGVAFVKKVKRDEAKILEKRR"
     gene            complement(14930..15433)
                     /locus_tag="RJ318_000965"
     CDS             complement(14930..15433)
                     /locus_tag="RJ318_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HDV7430848.1"
                     /translation="MAEHQVNYASGLPVVLTSVDKLVQWGRSNSLWALSYGLACCAIE
                     MMAAGGSRYDFDRFGTIFRASPRHSEVMIIAGTLCKKHAEFTRRLYDQMPDPKWVISM
                     GSCANTGGMFNTYSTVQGVDRIIPVDIYVPGCAPRPESFQFALMILQKKIRKEKASRK
                     IAPKRLI"
     gene            complement(15415..15804)
                     /locus_tag="RJ318_000966"
     CDS             complement(15415..15804)
                     /locus_tag="RJ318_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase subunit 3"
                     /protein_id="HDV7430849.1"
                     /translation="MSHIDASHPYFGIFLMLVLASVIFFGLVFLASKIGNNFAAKNRK
                     KLGLGIYECGPIPVKQANKINSQFFIIALIFILLDIEVVFLFPWALIFKDLGWFGFLE
                     VFVFIVLLGVGFLYAYKKGAFAWQSIK"
BASE COUNT         5951 a         3018 c         1894 g         5035 t
ORIGIN      
        1 cttagataac tagccaaaaa gctagttatc tctaaattta cttattgatt taaaatttga
       61 tttttactct tacataaatt ctgccaattt gaagcacttt tgatttcaag acattgtttt
      121 aaactttctt tttcagcttg tatattttgc attctttcat aagttaaggc ttggatatat
      181 aaagctcttg ctctatcttc atctgaaagt tttaatttaa gtaaatctgt taaaacagct
      241 aaactttctt catttttatt gattttagtc aaagcatcaa gatatataaa ttctaaatta
      301 ggactaaaaa gatttatacc tttaaaattt tgatagtcaa tggccttagg tgcgtaagtt
      361 aaaatagttg tttgcatatt atgatcatta gcgtaagaaa gtaaagcatc ataagcttcc
      421 accatactaa aattcattgg aaaactttct aaaatttgca aaattttaat ggcttgatta
      481 tagtcattta aacgcaataa agataaaaat tgcaaataat aagccttaaa attctcatca
      541 tcacttttta aaattctaga attagctatg tctttagaaa ttttaatcac ctgaggatat
      601 tgtttattgt caaaaagaat agatgctttt tgaagaccat aaaatataga atcttcatta
      661 taatttttat ctatataatc aagtgcttgt tcaacattag aagttctgat aagacaagct
      721 aacatttgtt ttttattctc aattttctga cctatatcat aagcactaaa acgcataaaa
      781 atatttgcag cattgataca attatcagct tttatggcat tttttaaatc attaatggct
      841 gctttctcta aaaattgagt agcatttgga atttttttac tttctataag atctttataa
      901 gctaaaatgg cactaaaatt tccctcttta taataaagtg caacatcttc atctaaagct
      961 ttatttgcaa tattctcatc tttatttgca tattgcttca ttaaatctgt ataacgctga
     1021 tgcaaaaagc ttgcattatt atcacctaaa gcaaagaata cctcatcact tgctttttta
     1081 atttcatcta aatacttacc atctaaataa tcatccatat acaaatcaag gtatttttta
     1141 gcatcactag atctgttagc atgtgataaa accaaggcta aatcttttaa agtttcttca
     1201 taacttggat caagtttgga cattttagca aaggcatctt cataaatact tgcacttata
     1261 tcaaattgtc ctttttgatt aaataattta gcaagttcta aagatcttgg aatatctttt
     1321 ccaaaatatt caggattggc ttttaaaatg gtattaatat attctatagc tttatttact
     1381 tgctcatttg aaagcaaatt ctttgccaaa ctcatagctg ctcttgcagc taaatctaaa
     1441 ttttttgtat taaaataagt attttcataa atatttacag ctttttcttt ttcatttaaa
     1501 ttataaatat agtctgcata atcaagtttt gataactgag taaaataatt attaggttgt
     1561 tcattatcta aaatcgacat tgtatactct acatcagcac gctgagctaa agcgatataa
     1621 gttcttaaca ttatatgtaa aacttctgaa aaatttttat cacttgtaaa agtacgcgtc
     1681 caatttttag catcatcaat catcttttct aaaatttgtt gatcacgcat acttggatct
     1741 tgagtgtaaa gtttattttg agctcttaat ttataaagta taaattcact agtaaaaata
     1801 ctgccacgat atctattgat agcattttgt gcatcaatca ccacttgatt gtaattagcc
     1861 ttatcgtatt cttttttgat gcgtaaataa gtattgatat ctgcactttg aggaataaca
     1921 acaggatcag aatttaaatc caaagctcca acataaggca aactctcatg tggaaaattg
     1981 atattaaaat cgagtccatc atagtcttta ataggtgcta gttctggtgt aaaaataaaa
     2041 gtaaaagcct tacttttatg cgaacttgat gaactgagtt ctttatctat ataaatattt
     2101 tgagaagtgt caaacattct tgcttgtatt tttggcaaaa tgatcatttt aattttttga
     2161 gcttcttgta taaattttaa atcaaaagca gaaaaactct gatcttttaa tttattatca
     2221 accataccta caatatcaca ttcaaaatga acttttgctt cggtaataaa tttttgacat
     2281 gtaaattcta aatcattact cgcatgtaaa actgcaaaag cttgattatt ttcgcgaccc
     2341 gtgtttaaaa caagctcaaa agcaaaagca tttaaaaaac ttaataaaat taaaaataat
     2401 attctcataa aataattata gcaaaactct tataacatta acaatataac aaaagtgctt
     2461 acacaaacac aaaaagctaa aataaaattt tgtataaaac taaacttaat attatgaacc
     2521 ctatcatttt tcataaataa agcatgaatt aaaatcttta aatacgcata aagcataata
     2581 acagaagata aagccacaaa aagcgccaaa taccaatatc catttaaaat tgctgtattt
     2641 aaaatcataa atttacccca aaacactcca aaaggcggga tacctgctaa agaaagcaca
     2701 ctaatgctta aacaaaaagc aattaaaggt tttttaacca aaagcccatt taaactctca
     2761 taagaattat tctcataatt gcttaaaatc ataaatacag cataatttgc aaaagcaaat
     2821 aaagtccaat atccaaaaat agcaagcaaa attccatcaa aattttgttc ttttaataaa
     2881 ggaatgcaag ctaccaaaac caaagaagaa tgcactacag aactataagc aaacattttt
     2941 ttgatattgt tttgacttag agccgcaaaa gcacctataa gcatagaaaa aatcgctaga
     3001 actattatga tatattcaaa acctgtatta tttaaaaaat caaacaaacg aataaccaca
     3061 accaacatgg caacttttgg cacaactgaa ataaaagcaa ccaaatttgt atgtgctgca
     3121 taatacacat ctttaagcca aaaatgaaaa ggtgccaaag aaagcttgat tgcacaaaga
     3181 acaaaaatca tcactccagc acccaaaagc atgggatctt tttgaaactc attttttaac
     3241 gctaaattag cagataaatc taaagttcct gtttttaaat aaataaaagc tacagccata
     3301 acaaaaaacc cagctcctac agccgctaca ctaaagtatt ttatcgcact tgaaatagca
     3361 ttatcacttc cacgcattgc tattaaagta taaagtgcta aagaagaact ttcaagtcct
     3421 ataaaaataa gtactaaatt tgagcttgaa accatcaaaa gcaaagatgc aatcataaat
     3481 aaaaataaag cataaaattc accctgattt tcttcttttt gcattaaaag atataaaaat
     3541 gaaaaacaca aaatcaccaa agaagcataa aatgaaacaa tatcattatt taaagtagcc
     3601 aaaaaagctt ttacttctaa accttgagca tttgcattat ttaaaatcaa aaaagcactt
     3661 acaatcaaag acaaagaact tatgccgata taaaacgatc gatgaaattt ccaaaaacca
     3721 gagcaaagca aaagaactat tgcagttgta attaaaaata aaaatggata agataagctt
     3781 atatttaaaa gttctaaatt taaaaaatta tttaacattt gcctctccta ttttagataa
     3841 aaaatctaaa gtattttgct caacagctct aatattcatt gtttttataa gattatccac
     3901 atctttttgt atcggcttta aaagtatatt tggcataagc cctagtccaa aaatcattac
     3961 tacaatgcac acaagcgcta ctatttctct aaaaagtaaa gaaaaaccct ctataaagct
     4021 ttgtttttgc atgaaaaata tttttctaaa tactgcgaac atataaatcg ctcctaaaat
     4081 aatcaccaaa cctgccaaca aagcgtaaaa taaattaatc tttgctatac ctaaaagaat
     4141 taaaaactct cccacaaaag aaacagttaa aggcaaagaa acactcgcaa gtaaaatgag
     4201 cataaagaaa attgaaaata aaggtgcttt tttggctaaa gaatggtaaa aagaaatatc
     4261 ataagtatga tatctttggt ataaaagttc aaccattaaa aataaagctc ccgttacaat
     4321 accatgtgca aacatataaa aaaccgcacc actaataccc aaagcattta aagaaaaaat
     4381 tcccaaaatc atcacaccaa gatgtgaaat agaactataa gcaatcaatt ctttaatatt
     4441 ttctgctcta taagcaatta aagcgttata aacgatactt actatacata aagctacaat
     4501 taaaggcata aaatacacac tcgcatctgg aaaaagtggt aaacaaaaaa gtaaaaatcc
     4561 aaaaggagcc attttaaaaa ctacaagcat tacagaaaca agtataggcg aatttgcata
     4621 aaccttaggt gcccaagtat gaagtggaaa taaaggagct ttgatagcaa aagcgataaa
     4681 aaatgctcca aaaagtaaaa gttgctctgt aaaatttact gctgaggcat tatttttcca
     4741 aatttccaag tcaaaagtga agatatttaa aagctgataa tttaaataag cttgataaat
     4801 caatgctaca agcattaaaa ttgaacccgc aaaagcatag ataaaaaatt tcacccctgc
     4861 tctaaaatct ttaccataaa ctcccataat ataaagcaaa ggcaaaagag aaaattccca
     4921 aaaaacataa aacaacaaac catcttttgc gctaaaaagt cccataatag caaattctaa
     4981 aaagaatata caagatataa gcgctttttg ttctagtttc aaaaataaaa agcttaaaaa
     5041 tatcatcaaa gaacttaaaa gtatcaatac aagtgcaata ctgtctactc ctacatgaaa
     5101 gctaaaaaat ttcaaaattt taaaagagag attataatca aagcttaccc cttgtaaaaa
     5161 atccgcaaaa atatccaaat ttaaagccaa aatcataaaa cttacaacaa cgctaaaaac
     5221 cttaacgcct ccgcgattta atagcaaaac cacaaaagca gaaattaaag gaaaaaatat
     5281 caaataattt agcattttac accatccata ctaaaatcaa caaaatcaca aaagctgcca
     5341 ccaaaaacct aagcattaag tttaagctgt ttggcataat cattttttgt gaaatatttt
     5401 gagaatacaa agcaattttt tcaactattc tatcaaaaat ataaagatca caatgcttta
     5461 aaatcgcaca taagctttca tattttgaaa cgataaattg atgatagaat tgaggaataa
     5521 aataatcatt acttaaaagt ttatgaattt tattttcttc aatactttcc ttaaaccaag
     5581 aatttttata agcaaaaata gccaaaattg cacccaaaat agctgctaca ctcgcacaaa
     5641 tcattacaat ttgattttgc gcatcaataa aaactaattt tgtgcttaaa tattcaaaaa
     5701 aactatgttc gaaaaatcct gcaataatag ctaaaaccat caaaggactc atagccaaaa
     5761 gtgcgatttt acttgcttca tgtggatgtt catcatgtct tgcaggggta aaaaatacca
     5821 acattaaaag tctaaagcta taaaatgctg ttaaaaaagc tgcgattaag agcactaaaa
     5881 aaataccatg gtgaaaagaa atgaaagaat atcccaaaat caaatcttta gagaaaaatc
     5941 ctgcaaaagg ataaattcct gctaaagcta aagatcctat acacattaaa atagctgtaa
     6001 tttttaaagg tttaaaaagt ccacccattt ttttaatgtc taatttatca ttcatagcat
     6061 gcattacatt tccagcgcct aagaaaagta aagatttaaa aaaagcatgc gtagctaagt
     6121 gaaataaagc tataccataa gccccaagtc ctgcagccac aaacatatat ccaagttgcg
     6181 ataaggtaga gtaagcaata atgcgtttta aatccctaac caccaaagcc atagaggctg
     6241 caaaaatcgc tacaaaagct ccaagtaagg caataatata agaaacttca ggaactaaat
     6301 cataaagcgt actcgcacga attaccaaat aaacccccgc tgttaccatg gttgctgcat
     6361 ggattaatgc agaaacagga gttggccctg ccatagcatc agcaagccaa gtgtgaaaag
     6421 gaaattgtgc agattttccc atagccccta taaataaaca agttgcgatt aagatcaaag
     6481 cattgtgatc taggctttgt gccatggaaa aaacttcatc atattttaaa gttcctgctt
     6541 gcaaataaag ccaaaaaatt cctaaaagca tacccaaatc cgcaatacga ttcataataa
     6601 aagcttcatt agccgcaaaa gaataagtat catttttata ccaaaaacct atgagcaacc
     6661 aagagcaaag cccaacgcct tcccaaccta cgaaaagtcc taagaaatta tcactcataa
     6721 ctaaaaaaag catagaaaag acaaaaagcc ccaaataagc aaaaaattta ttaaaacctt
     6781 catcatgagc catataaaaa atactataaa aatgcacaca agtagctaca atacctacaa
     6841 cactcatcat agtaagcgaa atagcatcta tatcaaagcc aaaatttact ccagcaaacc
     6901 attcaaacaa actcacatta aaagcttcat tgcaaaaaag caaatacaaa gaacaaaaag
     6961 cactcaaagc tactaaaagt gaacaaatta tccctacaaa ttgttttttc tcactcaaag
     7021 caaaacaact tgcaaacaaa aaagctacaa aaggactaaa aagagaaatc aaagctaaat
     7081 tttgcatact aagcctccac ttcttttaag ctttttaatt ccaaagtgcc ttttcttcta
     7141 taccaaagca cacacaaagc tacaccaaca gctacttcac aagctgctac acccatgata
     7201 aaaagcgcaa aaacctgtcc atttaaatca ttgtgcattt tagaagctgc tactaaggct
     7261 aaattagcac tatttaataa aatttcactt gagataaaaa gcatgatgag attttgtctt
     7321 tttaaaatcc ctacaagtcc tatgacaaac attaaaatag cgacgaaaaa atacttttct
     7381 atcattgttt ttcctttgtt agctctttat gagtaagcac tatagcacag actaaagcaa
     7441 tcaaaagcaa aatagctata aactcaaaag ctaaaagata ttttgaaaaa atcgctaaag
     7501 ccagttgttt attaaaatca aacaaagcag gatcatttaa aggcaaatcc gtgctgatat
     7561 tttggtattt aaaacctata agcatggcca aaagtaaaat cgtacttaaa accaccaaag
     7621 taaaaaaact ttttttagct ttaagttgtt ctttaaattc tttagaagca tcaaaaaaca
     7681 tcatcgcaaa actataaagt ccaagtacag ctccactata aacaataatt tgtatcacgc
     7741 ctaaaaactc tgcatcaagt aaaaaataaa atcccgataa aaataccatt ccacccgcta
     7801 aagcagaaag agaataaagc atatttttac ttaaaaccgc aatgccaaaa aagcctaaaa
     7861 ccactacact aaaaaataca aaagccaaat tttctatcat ttattttctc cttgctcttg
     7921 tgtattttga ttttctaagg ctctttcaat catcacatca taataatttg gcgttttttt
     7981 aacccacaaa tttgcatcct ttctaagact tcctgctcct tcaaattcaa cttgattttt
     8041 aagcttatca ataggagtta aaaaatcttg cttatagcca aaataagacc tttgctcggc
     8101 tgcattttca tactctgtgc catgcactat agcaagttca gggcaaacct cagcgcaaaa
     8161 accacaataa atacaacgcc ctaaattaat actataattt tctacttttt tacgcccatt
     8221 ttcatctaaa gaagtttcca ttctgataca attactaatg caaatttttt cgcaaagccc
     8281 acaacctata catctttcat tttcgctttc tataaaacgc atcaaacgat gaacagcacg
     8341 gtaacgattg tcaagcttta ccttttcaaa aggatattta atcgtagcgc tattatttct
     8401 cttaagtaat tctctcatca tcacaaaaag ccctacaaaa agctctagtt taacgcttct
     8461 acgcaaagct tgtgaaattt tctcccaagt gctaacagga gtttttcttt tctcatctac
     8521 taaataataa tttttcatat caaactccta taaaagaact gtcaaagcag tgattaaaag
     8581 gtttaaaaca gctaaaggga ttaagatcaa atagcacatt ttcatcactt gatctggacg
     8641 caattgcgga aaagcagctc ttgcccaaaa ataccaaaag aaaataaaac ttgattttac
     8701 tatcatcata atccaaccag gaataatcca aaagctatta aaacccccta aaaacaaaag
     8761 agtgaccaaa atagctccag ctatcataga agtatattca cctatgaaaa acatacccca
     8821 tcttaaaccc gaatactccg ttccataacc cgctacaatt tcagcatcat tttccgtcaa
     8881 acaaagcgga gttctattag tctctataaa taaagcaatt ataaaaagca caaaagccaa
     8941 aggttgttta aaaataagcc aagaaaaaaa tccatcgctt tgataattgt taatatccac
     9001 caaagaaaaa gaacctacaa gcattataat agcaatcaaa gctaaagctc ctacgctttc
     9061 ataggaaata atcgatacaa gccctcttgc agcccctaaa atcgaccatt tattattact
     9121 tgcaagtcca cccaaaaaca ccgcataaaa gcaaagtcct gaagtgccga tgacaaaaag
     9181 caaagctaca ttgatatctg ccactatagg ctgaatcacc cttccaaata aagtaaattc
     9241 aggtagcata ggaatagctg ctaaagaaac aaaagcacaa atagcagaaa tcaaaggtgc
     9301 tatagcaaaa ataaattttt gcgaatttga agggattata tcttctttag taaaaagttt
     9361 tatcatatca gctacaagtt gaataagccc aaaaggccct accatatcag gccctatgcg
     9421 tctttgaaaa taagctaaaa cctttctttc agcataagtt gcaagacctg ctaaactcgc
     9481 aaatattgca atgataataa tacatttaat caaagtctct aaagcaaaaa aagcaaaatc
     9541 actcatggtt tgctcctaat ttttctaaat tcgccacaac aaatctttca tcaaaaaagc
     9601 ttagcgtatc aagtttttca tcaaaatacg gcaagaaagc tccatttttt atatccttat
     9661 ccacacgcac actaaggctt aattctttat cttttatttt aagttttaca agatctttat
     9721 cttttaaatt tttctcttta gctaaatttt cacttacacc taaaaaaatc acctcattaa
     9781 tcgcactagc acgatttgaa aatctaccaa attgatagct aggattagca ctataaagca
     9841 aaatttcatc ttcttttagg cttaaatttt caaaatttgg agagatgaat tcttttttag
     9901 caacttgttt gaaacattct aaattaagct catatcccct tttacaatcg cctgcattgg
     9961 tataaaaatt gtctaaatga tcaaaatcaa tcggagaaaa acctttattt atagggagtc
    10021 tcttagtata atttatagta tattcctcat caaaacctaa agcattagcc aaatcattta
    10081 aaaaatatcc cttaaattct aaagcagcat tagttggtac cactctttta tcataattta
    10141 aaaaagttcc ttcttgctga tttaaactcg cactagctaa atttgcatgc tcttcataag
    10201 aaaaactaaa atcacctttt tcattgtagc ctaaagtctt gccttcttgt gtattgttat
    10261 ccaaatcaca aatcatagcc acacctaagg tattagtatg cgtaggattt aaaaagactt
    10321 taaaaggagt agtattttgg atcaaagcaa gtaatttagc aagttttttc gcatttttat
    10381 gaaaataaaa atcactccct acaacaagag taaaatttgc ttttttaagc aataaatctt
    10441 ctaatttatc ttcatctatg cctaaatttt tagcaaaaac agagcgttgt acttctatga
    10501 ttttttttac ttttttaggt acgacttttt ttacttcttt ttgaatttca ttgccttctt
    10561 catctttttc tatgacttgt tctacaactt cttcgttgat actttcttct atttctttat
    10621 tttcactaac aaaaaactct gctaaatgag ttttaatacc ttcatcttgg ctaaattttt
    10681 gaagtaaaaa atataaaatt tgctcttcat cgccattttt atgaatgtgc gggataaaat
    10741 ttttagaata ttttgctata cccatatctt ccataggatg aaaataaagc cctgagcctt
    10801 tattcatcac taaagcatta ttgattttat agctaagcgt tggagcatca tatcttaaaa
    10861 gcattccagc tacaaccaaa aaatcacttt ttgttatatc ttgagtatta gcgctataaa
    10921 actcaccaga attagcgata aattcttgta aaaattcttt aaatttcaaa gcttcttcat
    10981 tgatcaaaga aagattaaat ttctttttta aattttgtaa aatcaaagct tcttcattgg
    11041 taataaaact attaaattta atgtttttaa tttcattttt ctcaaaaagc tccacaagtt
    11101 ctttaaaggc tttttcatct ttatccgcct cattttgcgt atcaaaagca aaccttgcag
    11161 ccttatttaa actcgcaaag gcaaaatcat tactcacacg ataaattttt tctttttgat
    11221 tgctaatgcc gctttgctta atatcataat acatcaactc acaatcgctt gaatgcggat
    11281 ttgaagcagg gattctttta agttcccaaa tatttgaagt gtattgaaat ttcgaaccta
    11341 tcaaagctcc tgttggacac acgcttgtac attctccaca aaatgaacaa tcaagcgtat
    11401 caccatttgc agggcctatc aaactttttt gaaatttagt ccaaatcgca taagcatctt
    11461 ttcccatgct ctctttaaag ctattatcca cactatctcc gccacgagga acagtcttta
    11521 aagcactttc gccgatttta tccttacaaa ctgtaataca acgctcacac actatgcaaa
    11581 gtgcgggatc gtaattaatc attccccaat gtttatgtgg tttatgcgtg tctttaatcc
    11641 aatgtttttg aacatttaca cgacttttat gagtaaaatt ttgcaattca cactcgcctg
    11701 atttatcgca aactccacat tctaaaggat gattgataca ataagcttgc atgatctcat
    11761 ttctttcatc ccaaagattt tgtaaatcac tttctacaac cataccctct tttgctttag
    11821 tattgcaaga atataccttt ttaccatcag cttcaaccat acacatacga caagccaaag
    11881 taggactaca gcccgaaaga tagcaaatcg ctgggataaa aatatcattt cttcttgcta
    11941 tatttaagat atattcgcct tcttcaaagg cgcaatctat accattaatc ttaactgtca
    12001 ttttgcttcc tttatgcgaa ttggagtaaa atcaaaacca ttattttcat aatttaaaaa
    12061 agctatggtg ccttgtaaat tttcatctaa acaaagctta gttttaaaac taaaatcttt
    12121 agctaaaatt tcaacttcac tttgatcttt gcattttgca atttgtaaaa attgctttga
    12181 acaatgtaaa tttttatctt gcaaatttgc tctaaaaagc actaacccgt cataattatc
    12241 gagttctttt agggtgttta attttgcctt tttaaaatcg cattcttctt catcgctatc
    12301 taaaatcttt aatccatatt ttacacttaa gaaattcaaa aaatatttga tattttcact
    12361 atctttataa gaatggatat ttttatctat aattaaatac ttaacctctt ttaaaaaagc
    12421 aagcacttcg cctgcttctt cctctccaaa acaagattca gcacttaaat atccctcatc
    12481 taaatcgcaa aattgtcctt catcgcttaa tttacaaagc aaggccaaaa caaaactcaa
    12541 acttgcaatt tcgcatttgt aaaatttagc ttttaagttt ttatcttcca aacaagaaat
    12601 attaatgcta tttacaccta ttttttcaca taaatttttg tttttaaggc ttggcatatc
    12661 taaaaaacaa agagcattat cataaatcat accctctcct tttttataac aatagtccaa
    12721 tcgacttgat taaatttcaa agaatttaaa agctcacagc cttgttcttt tacaaaagaa
    12781 aaactttttt caacaggaga aaaatcgccg atttcaaaaa gcaccactaa aacctcacct
    12841 tgttttgctt cttttatgat ttgtgctaaa tcttcaaaaa gctctttgct ttttcttaaa
    12901 tctacccttc tcatcgatct atctcaccta aaactatatt tacattaccc ataatggcta
    12961 caacatcagc taaataagta cctacaagca tttcttcaaa aaacgcacaa tgccaataac
    13021 taggcgttct agcctttaaa cgataaggtc ttcctgtacc atcactatgg ataaaaaagc
    13081 caagctcacc ttttggactt tcagtaggca cataaacttc gcctttaggg ggttttaaac
    13141 cttgagtgat taaaacaaaa tgctgcatta aagaataatt ctgcgttaaa atttgttcct
    13201 ttgaagcact tacatactca ggatgcgtag ctaaaatttc aggcgaagta tctttataaa
    13261 gcatggcaca ttgtctaagg attttcaaac tttcacgaaa ttcttgcata taaactttat
    13321 atcttgcata agaatcccct tgcgtagcat aaggcacacc aaattcaact tcattataaa
    13381 gcaaataagg ctcttctttg cgtatatcgt attttatgcc acttcctctt aacatcacac
    13441 ccgtacaacc ccaatttaag gcttgttctt tagtaaccac acctacattt tcagttctta
    13501 aacgccaaat tctattatca tctaaaagat cttcataatc ttttaaatca tttggaaatt
    13561 tatcgcaaaa tgcaagcatt tcttctaaat aattctcagg taaatcaagc ataaccccgc
    13621 ctattctcat agaagaatgc gtaagccttg caccgcaata cttttctatc aaatccaaaa
    13681 catactctcg ttctctaaaa cagtataaaa atacactcat cgcaccaata tcaagcgcat
    13741 gagtagcaag ccaaagcaaa tgcgatgtga tacggtttaa ttctaaaagt atcatgcgta
    13801 tcactgcggc acggcgtgga atctctaaac cacaaagctt ttcaaccgct gcacaataag
    13861 cataattatt cgctgaagca gcgatatagt ccattctatc agtagtagga ataaattctt
    13921 gataaatcat attttcagcc attttttcca taccacgatg catataacct atacaaggac
    13981 gcgcttttac aacttgctct ccatcgagtt ctaaaataag acgcaaattt ccatgcgctg
    14041 aaggatgttg agggcctaag ttgataatca tttttgagtc ttcttgctca aaagctatat
    14101 tttcataata aggttttaac ttgctaggaa tttgcatttt aacgcctttt ctctaaaatt
    14161 tttgcttcat cacgttttac tttttttaca aaagccacac cttcatcttc ttgatattct
    14221 tgtttaaagg aaatttcctt cttttgacca ccttttggca cttcatggta aagtcttgca
    14281 aaatttagcg tatctttatc atcagcaaaa ccagaatctc tttgttcttc gcccactact
    14341 tcacgatatt ctttgccaaa aattttatca atctcatacc atcttgcaaa ctcatcgccc
    14401 tttaaaggat aagttttcaa aagcggatgt ccaaaccaat catcaggcat taaaatgcgt
    14461 tttaaattag gatgatttat gatgaaaatt ccaaacatat cataaatttc tctctcactc
    14521 caatttgccc ctttaaaaac atgagccacg ctttgcaaac gctcttttac gcctacaaaa
    14581 gtttttattc tcactcttaa ttttttttct aaatttaaaa gctgataaaa cacttcaaaa
    14641 ccatttttat ctgctataaa atcaatagca cttgcttctg taaaacttaa ataacctaaa
    14701 gttttaagca tttgcaaggt tttaacattg tcttcttttt taatttctat tacccaaaaa
    14761 tcaagctcta caaaggaatt taaaatttct acttgagttt ttaaaacttc aaaatcctct
    14821 ttaaaaacac tttcattaac atcagatttt acagtgtgtg gtgcgtgata aaatctatct
    14881 ttgtagtaat tttgagtttg agcatttttt ttatcgctat actttctcat catatcaacc
    14941 ttttaggtgc gatcttgcga cttgcttttt ctttgcgaat ctttttttgc aaaatcatca
    15001 aagcaaactg aaaactttcg gggcgtggag cacagcctgg cacataaata tctacaggta
    15061 taattctatc cactccttga acagtagaat aagtattaaa cataccgcct gtattggcac
    15121 aacttcccat agaaatcacc catttaggat caggcatttg atcataaagt cttcttgtaa
    15181 attcagcgtg ctttttacac aaagttcctg cgataatcat cacttcactg tggcgtggtg
    15241 aagctctaaa aatcgttcca aatctatcaa aatcatatct tgaaccccca gccgccatca
    15301 tctcaatcgc acaacaggca agtccataag ataaagccca taaagaatta ctcctgcccc
    15361 attgaactag cttatccaca ctggttaaaa ctacgggcaa accacttgca taatttactt
    15421 gatgctctgc catgcaaacg ctcctttttt ataagcatat aaaaatccaa ctcctaaaag
    15481 tacgataaaa acaaaaactt ctaaaaatcc aaaccaacct aaatctttaa aaatcaaagc
    15541 ccaaggaaat aaaaacacaa cttctatatc caaaagtatg aagattaagg cgatgatgaa
    15601 aaattgagag ttaatcttgt tagcttgttt aacaggaata ggaccacatt cataaattcc
    15661 aagtcctaat tttttgcgat tttttgcggc aaaattatta ccgatttttg aagctaaaaa
    15721 aaccagtcca aaaaaaataa cactagcaag taccagcatt aaaaaaatac caaaataagg
    15781 atgcgaagca tctatatgag acatttattc tcctttttta aagcacttta atcactccac
    15841 aacaaaaatt aaatttacac ttttctttat tttactctaa actttctata ttgaaact
//
LOCUS       DAPIYB010000039        15340 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.039, whole genome shotgun sequence.
ACCESSION   DAPIYB010000039 DAPIYB010000000
VERSION     DAPIYB010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15340
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.039"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            71..970
                     /gene="hisG"
                     /locus_tag="RJ318_000967"
     CDS             71..970
                     /gene="hisG"
                     /locus_tag="RJ318_000967"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDV7430850.1"
                     /translation="MQENTRLRIAIQKSGRLSKESIELLSECGVKMHIHEQSLIAFST
                     NLPIDILRVRDDDIPGLIFDGVVDLGIIGENVLEENELERQSLGENPSYKLLKKLDFG
                     YCRLSLALPQENKFQNLKDFEGLRIATSYPQLLKRFMKENGINYKNCTLTGSVEVAPR
                     ANLADAICDLVSSGATLQANNLKEVKVIYESRACLIQKENALSKEKQALVDKIMLRVA
                     GVMQARESKYIMLHAPKEKLDKIQALLPGVERPTILPLAHDEKNVALHMVSKENLFWE
                     TMEALKEEGASSILVLPIEKMLK"
     gene            978..2264
                     /gene="hisD"
                     /locus_tag="RJ318_000968"
     CDS             978..2264
                     /gene="hisD"
                     /locus_tag="RJ318_000968"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDV7430851.1"
                     /translation="MQILVYDNLDEKQKEEALKRPAISAKDEISKIVSSIIKEVQEKG
                     DKALIEQALKFDKAEISKIKITQEEITQASNRLDKDLQEAILVAYENIKKFHEAQIPH
                     EIALETTKGVKCEVLTRPIEKVGLYIPGGLAPLFSTVLMLAIPAKIAGCEKIVLASPA
                     KINDAVLFCAKLCGVDEIYQMGGAGAIAALTYGTQSVLKVDKIFGPGNAFVTEAKRQV
                     SSDINGAAIDMQAGPSEVLVIADDLANEKFVASDLLSQAEHGADSQVILVCLSQDFAK
                     KASDEVQSQLELLPRKELASKSIANSRIIIAKDLNQALEISNLYAPEHLIIQTQNPRE
                     LLKGVKHAGSVFLGAYSPESMGDYASGTNHVLPTYGLTKTHSSLGLADFSKRMTVQEL
                     SKEGFLALGKSVEILAQNEHLDAHKNAVTFRLESLK"
     gene            2261..3319
                     /gene="hisB"
                     /locus_tag="RJ318_000969"
     CDS             2261..3319
                     /gene="hisB"
                     /locus_tag="RJ318_000969"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HDV7430852.1"
                     /translation="MSQKILFIDRDGTLIEEPKSDFQIDTLEKLRFEKDAIPTLLKLK
                     KFGFKFVMVSNQDGLGTPSFPKENFEIAHEKMLDILKSCGIEFQDIFICPHFENENCA
                     CRKPKTAMLEEYIKHELYDKEQSFVIGDRESDMILASNLGVRGLKYGELSWKEIENEI
                     LSSFRSASYQRTTKETDIKVKVCLNGGKVSIKTGIDFFDHMLEQIAVHGGIGLEISCK
                     GDLEIDEHHSVEDVALALGACIKKALGDKIGIARYGFALPMDECLASCAMDFCNRPHL
                     VYKAKFKKSHLGALSTEMIEHFFYSLSYAMGVSLHLKVKGKNDHHKAEGLFKAFAKAL
                     KMAVKIESENLASSKGVI"
     gene            3316..3903
                     /gene="hisH"
                     /locus_tag="RJ318_000970"
     CDS             3316..3903
                     /gene="hisH"
                     /locus_tag="RJ318_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDV7430853.1"
                     /translation="MKIIIIDTACANLASLKFCLDRLGFNATISRDLKELESADKLFL
                     PGVGTAKEAMKNLEQFNLIDFIQNTKKPLLGICLGMQILGNFSEELNQETLKLIDFTT
                     QKFKAKEGFTFPHMGWNEVYSSHALFKGLEGAYFYFVHSYCVGLGKYTIADCEYSQKF
                     SASVMKDNFYGVQFHPERSSEAGEILISNFIKDIG"
     gene            3900..4631
                     /gene="hisA"
                     /locus_tag="RJ318_000971"
     CDS             3900..4631
                     /gene="hisA"
                     /locus_tag="RJ318_000971"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDV7430854.1"
                     /translation="MTQIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAG
                     AKELHLVDLTGAKDPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVV
                     IGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFY
                     SNKGLKHILCTDISKDGTMQGVNVRLYKLIHEIFPNICIQASGGVASLKDLENLKGIC
                     SGVIVGKALLDGVFSVEEGIRCLAN"
     gene            4616..5572
                     /locus_tag="RJ318_000972"
     CDS             4616..5572
                     /locus_tag="RJ318_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COG2958 family protein"
                     /protein_id="HDV7430855.1"
                     /translation="MSSKLSYKELTLEILKQSDRPLSVNEIWQKALEQGLDKKLSSIG
                     QTPIATLGARIYVDIKELQHNSLFIKASQKPTTFWLKERENELLKLDNKNEITNEKQE
                     KNKFHERDLHPLLVKFLYENLDFNLNCKTIYHEQSKKGKGGEDKWNYPDIVGVYFPYD
                     DYEKETITLLENIKQNSYKLFSFELKIALNFSNLKECYFQAVSNSSWANEGYLVVLQE
                     IDSEVLSELRRLNQSFGIGVIKLEKDISNSQILISAKEKELDIQTLNMLINKNPNFKE
                     FIDDINKQIKVGKEAKIQANFDEIKSDEEMEKYLKEKCILEK"
     gene            5573..6340
                     /gene="hisF"
                     /locus_tag="RJ318_000973"
     CDS             5573..6340
                     /gene="hisF"
                     /locus_tag="RJ318_000973"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDV7430856.1"
                     /translation="MLTKRIIACLDVKDGRVVKGTQFKNHKDMGDIIELARYYSQNGI
                     DELVFYDIAASARKERISREWVSEVAKNINISFCVAGGIKSEEDAAELLANGADKISI
                     NSPALNDPSLITRLAKSFGVQCVVVGIDSFKDENGNLKVFQYTGDEKTSKHSGKSTLE
                     WVKKVQDLGAGEIVLNMMNQDGVKNGYDLEQLEAVYKICKVPLIASGGAGKMEHFLEA
                     FKLGIDGALAASVFHQKLIDIKELKIYLKNQGLSIRI"
     gene            6342..6965
                     /locus_tag="RJ318_000974"
     CDS             6342..6965
                     /locus_tag="RJ318_000974"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDV7430857.1"
                     /translation="MQNFKELNEKIAWQKVDNLLPVIIQDAKTCEVLMLGFMNNEALE
                     KSLESGKVVFFSRTKQRLWMKGEESGNFLNIIDLSLDCDNDTLLILANPVGPTCHTGD
                     ISCFEKISKNADFVFLARLEKLINARKNADENTSYTAKLFKSGTKRIAQKVGEEGVET
                     ALAATVKDKEELICEAADLMYHLSVLLADANLSFSDVISKLKERHKA"
     gene            complement(6990..8150)
                     /locus_tag="RJ318_000975"
     CDS             complement(6990..8150)
                     /locus_tag="RJ318_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-carboxylate
                     N-succinyltransferase"
                     /protein_id="HDV7430858.1"
                     /translation="MINTKEDFLLLIKQIEQKSGYKKPKAFGIARLDRGQLNKNKILQ
                     ASFALINYEQNFGSAAIMLEAFMQRGVEIDFNASEFVQTLKLEDIDFALSCFKPFLEE
                     DGHQNIDLLKIIKDKFKDDEFSFVCLFEDKEPLSVESIYLKLYLLSTKKVPLRSINLN
                     GAFGLLSNVAWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTR
                     ILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGACMVEGRISSSAIVGEGSDVGGGA
                     SILGVLSGTSGNAISVGKACLLGANSVTGIPLGDNCIVDAGIAVLEGTKFLLKDAEEL
                     AKLNPYFNFDKEIYKGLELKGLNGLHFRQDSISGAMIVALNKKAVKLNEALH"
     gene            complement(8176..9282)
                     /locus_tag="RJ318_000976"
     CDS             complement(8176..9282)
                     /locus_tag="RJ318_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HDV7430859.1"
                     /translation="MKEQILEKLKTVKYPGFEKDIVSFNFVKDIKIQDDGVFIDIEIV
                     SANPEVANEIRKNTIEALSSLALKNIELNIITPKIPEEKSNSRSGKNIAPQVKNFIMV
                     SSGKGGVGKSTTTVNLAISMAKMGKRVGILDADIYGPNIPRMLGETKTQPEVVGQRLK
                     PILTHGVYMMSMGVLIEEGQGLMWRGAMIMKAIEQLLADVIWPELDVLFLDMPPGTGD
                     AQITSAQSIPIAAGVCVSTPQTVSLDDSKRALDMFNKLHIPIAGVIENMSGFLCPDNG
                     KEYDIFGKGTAEDMAKAYKSEVLAQIPIEMIVREGGDEGKPVSFYHPESVSSKRYLMA
                     AEKIWSFIEKINNEGGADNSAIQPVMNGKSACSH"
     gene            9405..10520
                     /locus_tag="RJ318_000977"
     CDS             9405..10520
                     /locus_tag="RJ318_000977"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HDV7430860.1"
                     /translation="MSEMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSF
                     YPFKKIVVTSSNITYMKKFTKNYEFIEGGDTRAESLKKALELIDSEFVMVSDVARVLV
                     SKNLFDRLIENLDKADCITPALKVADTTLFDNEALQREKIKLIQTPQISKTKLLKKAL
                     DQNLEFTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLDLPTPSFEIFTGNGFDV
                     HEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMK
                     FKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEF
                     RINVKATTTEKLGFIGRKEGMAVLSSVNLKYFDWTRL"
     gene            10517..11404
                     /locus_tag="RJ318_000978"
     CDS             10517..11404
                     /locus_tag="RJ318_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDV7430861.1"
                     /translation="MKVLIIENEIYLAQSISIKLSDAGYSCEIINSFDEYNGEKYYDI
                     ILLSTNTNNFLKAVGQFKHSIIILLISYISTDTVSNPLKLGASDYIQKPFMIEELIRK
                     IKHYQDFRKLSILNKAYQSYIKSRLETIKIPEYNYKKLKLPLILKSNKQSSADAFVFN
                     YANECDITLSFIDLTSTNSVEKVMKLPTENNLLFLSNFQALKAAEKEKLLDFIQNKNV
                     ILHTNSNTDDLKINCINLNDNEKNINSNEILTIDEYVKYVIINYQNIFPDTDLSKKLG
                     ISRKSLWEKRKKYEISKKK"
     gene            11382..12542
                     /locus_tag="RJ318_000979"
     CDS             11382..12542
                     /locus_tag="RJ318_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HDV7430862.1"
                     /translation="MKSARKNKNITIDQNEFGILSLIKEGLLGTCTHLMNEKEVNEII
                     KSGKFKGESFPYPLSFAPKNAEEALNDIKSGDRIDLMLDEKVVGHIDFKSQFKNNKNF
                     SDIFSPNTCSLEDMGTTCISGKIEIYNSQIEKIKENFQQIKNNLNAQKITAIVSSFDP
                     LHRAHERMFRWTIDKADLVVIFLVESFDVNGFEFELKEAYLKKFIQNYLPPDRIFIFP
                     LKNINIFHAHLNPGLESIIAKSLGCTKLVVGQNHTGLGMFYDDNQPKTILDDFSKDYG
                     IEVIVLPEFVFCDQCRMIVSTRSCPHGCHHHLHYNSQSLKDLLRAGIIPPAIFIRKEV
                     SSVILTSLFPNRLKNMQKIYNELFPTDGILEYKNDEEFYQKLLEIHQMSYMV"
     gene            12547..13047
                     /locus_tag="RJ318_000980"
     CDS             12547..13047
                     /locus_tag="RJ318_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HDV7430863.1"
                     /translation="MQKLFLTFFYSGSVKKASGTFGTIAALIPAFFILKYLGINTLFL
                     LSILIFVASIRVIDDYEKKTGIHDDKHIVIDEVAGVFLACAIAASVENSIVNFILAFV
                     LFRLFDITKPSIIGKIDKKVKGGLGVMLDDMLAGLFAGLLSAVIYGFLLKFNLVFWDI
                     NLKDLF"
     gene            13126..13389
                     /gene="rpsT"
                     /locus_tag="RJ318_000981"
     CDS             13126..13389
                     /gene="rpsT"
                     /locus_tag="RJ318_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDV7430864.1"
                     /translation="MANHKSAEKRARQTIKKTERNRFYRTRLKNITKAVREAAANGNK
                     NAANEALKVANKSIHAMVSRGFIKKQTASRRVSRLALLVNKIA"
     gene            13408..14475
                     /gene="prfA"
                     /locus_tag="RJ318_000982"
     CDS             13408..14475
                     /gene="prfA"
                     /locus_tag="RJ318_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDV7430865.1"
                     /translation="MLASKLDPFFKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEP
                     IVLKAKEYLKTLDNIEENKALLNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDP
                     NDERNIFLEIRAGTGGDEASLFVGDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEII
                     MLVKGTGAYSRLKYEGGTHRVQRVPQTESQGRVHTSAITVAVMPEVDDIEIEINPNDL
                     KVDVMRSSGHGGQSVNTTDSAVRITHIPTGIVVVNQDGKSQHKNKESAMKVLKARLYE
                     MQESERLAKESEARKSQVGSGDRSERIRTYNFPQNRISDHRINLTLYRLDAIMQDGLF
                     DEIIEPLITHHQAQALQEQNL"
     gene            complement(14489..15244)
                     /locus_tag="RJ318_000983"
     CDS             complement(14489..15244)
                     /locus_tag="RJ318_000983"
                     /EC_number="1.14.14.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HugZ family heme oxygenase"
                     /protein_id="HDV7430866.1"
                     /translation="MNFESIISHMNDHHKSNLVDLCKKFGGIEQVQDVFLKSVDFNGL
                     DLVYNDKENLRVEFPKKADENTIKDAIISLCMSAKSEQNFSGVEKELNEFMLSFNSVA
                     LATLNANGEVVCSYAPFVSTQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAVS
                     VILRKRLRYRVNASFLERGERFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKG
                     RFVKGFGQAYDIENGNVAHVGASGNPHKFLHKH"
BASE COUNT         5572 a         2301 c         2569 g         4898 t
ORIGIN      
        1 aaaacccttg ctaaaaattc aactacttat gctaatataa gtttttaatt tttaatttca
       61 aggatatgtt atgcaagaaa acactcgttt acgcattgcg atacaaaaat caggtagact
      121 ttcaaaagaa tccatagagc ttctttcaga atgtggtgtt aaaatgcata tccatgaaca
      181 aagcttgatc gctttttcta caaatttacc catagatatt ttacgcgtta gagatgatga
      241 tatccctggg cttatttttg atggggttgt agatttaggc attatagggg aaaatgtttt
      301 agaagaaaat gaacttgaac gccagtcttt aggagaaaat ccaagctata agcttttaaa
      361 aaagctagat tttggatatt gccgtctttc tcttgcctta cctcaagaaa ataaatttca
      421 aaatttgaaa gattttgaag gcttaaggat agctacttct tatccacaac ttttaaagcg
      481 ttttatgaaa gaaaatggga ttaattataa aaattgtacg cttacaggtt ctgttgaagt
      541 agcccctagg gcaaatttag ccgatgcgat ttgcgatctt gtttcaagcg gggcaacttt
      601 acaagcaaac aatcttaaag aagttaaagt catttatgaa tctcgtgctt gtttgattca
      661 aaaagaaaat gctttaagta aagaaaaaca agccttagtg gataaaatta tgttgcgtgt
      721 agcaggagta atgcaagcaa gagaatctaa atacattatg cttcatgctc caaaagaaaa
      781 gcttgataaa attcaagccc tacttccagg agttgaaaga ccgactatct tacctttagc
      841 acacgatgaa aaaaatgtag ctttacatat ggtaagtaaa gaaaatcttt tttgggaaac
      901 catggaggct ttaaaagaag aaggtgcgag ttcgatttta gttctgccta tagaaaaaat
      961 gttaaagtga gtaaaaaatg caaattttag tatatgataa tttggatgaa aaacaaaaag
     1021 aagaagcgtt aaaacgccct gctataagtg cgaaagatga aatttcaaaa atagtaagtt
     1081 ctatcattaa agaagtgcaa gaaaaaggcg ataaagcttt gatagaacaa gctttgaaat
     1141 ttgataaggc tgaaatttca aagattaaaa tcactcaaga agaaatcact caagcaagca
     1201 atcgtttaga taaagattta caagaagcta ttttagtggc ttatgaaaat atcaaaaaat
     1261 ttcacgaagc ccaaatccca catgaaatcg ctcttgaaac tacaaaaggc gttaaatgtg
     1321 aagttttaac acgccctata gaaaaagtag gactttacat accagggggt ttggcacctt
     1381 tgttttcaac ggttttaatg ctagctattc ctgcaaaaat tgcaggttgt gaaaaaatcg
     1441 ttttagcaag tcctgcaaaa atcaatgatg ctgtgctttt ttgtgctaag ctttgtggcg
     1501 tggatgaaat ttatcaaatg ggcggtgcag gagctatagc agctttgact tacggtaccc
     1561 aaagtgtttt aaaggtggat aaaatttttg gcccaggaaa tgcctttgta accgaagcaa
     1621 aacgccaagt aagtagtgat ataaacggag cagctattga tatgcaagca ggacctagtg
     1681 aagttttagt catagctgat gatttagcta atgaaaaatt tgtagctagt gatttgcttt
     1741 cacaagctga acatggtgca gattctcaag tgattttagt gtgtttaagt caagattttg
     1801 ctaaaaaagc aagtgatgaa gtccaaagtc aattagaact tttgcctcgc aaagaacttg
     1861 caagcaaaag cattgctaat tcacgcatta tcatagctaa agatttaaat caagccttag
     1921 aaatttcaaa tctttacgcc cctgaacatt tgatcataca aactcaaaat ccacgagaac
     1981 ttttaaaagg tgtaaaacac gcaggatcag tatttttagg agcttattcc ccagagtcta
     2041 tgggtgatta tgcaagtggg acaaatcatg ttttacctac ttatggactt actaaaacgc
     2101 attctagttt aggtttggca gattttagta aaagaatgac cgttcaagag ttaagtaaag
     2161 aaggtttttt agctttaggt aaaagtgttg aaattttagc acaaaatgag catttagacg
     2221 cgcacaaaaa tgcagtaact tttcgtttag aaagcttaaa atgagtcaaa aaatcctttt
     2281 tatagataga gatggcactt taatagagga gccaaaaagc gattttcaaa tcgatactct
     2341 tgaaaaattg cgttttgaaa aagatgctat tcccactctt ttaaaactaa aaaaatttgg
     2401 atttaaattt gttatggtaa gcaatcaaga cggtcttgga acaccaagtt ttccaaagga
     2461 aaattttgaa atcgctcatg aaaaaatgct tgatatttta aaaagttgcg gtatagaatt
     2521 tcaagatatt tttatttgtc cgcattttga aaatgaaaat tgtgcttgca gaaaacctaa
     2581 aaccgctatg ttagaagagt atatcaaaca cgaactttat gataaggaac aaagttttgt
     2641 tataggagat cgtgagagtg atatgatctt ggcttcaaat ttaggcgtgc gtggtttaaa
     2701 atacggcgaa ctttcttgga aagaaataga aaatgaaatt ttaagttctt ttagaagcgc
     2761 gagttatcaa agaactacta aagaaacaga tataaaagta aaggtatgct taaatggggg
     2821 taaggttagc attaaaacag gtattgattt ttttgatcac atgttagagc aaatcgctgt
     2881 acatggaggt atagggcttg aaatttcttg taaaggagat ttggaaatcg atgagcatca
     2941 tagcgttgaa gatgtagcct tagcacttgg agcttgtatc aaaaaagctt taggggataa
     3001 aatcggcatt gcaagatatg gttttgcttt acctatggat gagtgtttgg caagttgtgc
     3061 aatggatttt tgcaatcgtc cccatttagt ctataaagcc aaatttaaaa aatctcattt
     3121 aggggcttta agcacagaaa tgatcgagca ctttttttat tctttaagct atgctatggg
     3181 cgtgagtttg catttaaaag ttaaaggcaa aaacgatcat cataaagccg aagggctttt
     3241 taaagccttt gcaaaagctt tgaaaatggc agtaaaaata gaaagtgaaa atttagccag
     3301 ctctaaagga gtgatatgaa aatcatcatc atcgatacag cctgtgcgaa tttagcatct
     3361 ttgaaatttt gtctagatag attaggtttt aatgcaacta tcagtaggga tttaaaagag
     3421 cttgaaagtg cggataagct ttttttacct ggagtgggta ccgcaaaaga agcaatgaaa
     3481 aatttagaac aatttaatct tattgatttt attcaaaata ccaaaaaacc tttgcttggt
     3541 atttgtttag gtatgcaaat tttaggaaat ttttctgaag aattaaatca agaaacctta
     3601 aaactcatag attttacaac tcaaaaattt aaagctaaag aaggctttac ttttccacat
     3661 atgggatgga atgaagttta tagctctcat gctttgttta aaggcttaga aggggcttat
     3721 ttttattttg tgcatagtta ttgtgtagga cttgggaaat acactatagc agattgtgag
     3781 tattcgcaaa aatttagcgc aagcgtaatg aaagataatt tttacggagt gcaatttcac
     3841 cctgaaagaa gtagcgaggc tggggaaatt ttaatttcaa attttattaa ggatatagga
     3901 tgactcaaat catacccgca ctcgatctta tagatggcga agtggtgcgt cttgtaaaag
     3961 gggattacga acaaaaaaaa gtatataaat acaatccctt aaagaaattt aaagaatacg
     4021 aaaaagcagg agcgaaagaa cttcatcttg tagatcttac aggtgcaaaa gatcctagca
     4081 aaagacaatt tgctttgata gaaaaattag ccaaagaagt cagtgtcaat ttgcaagtag
     4141 gtggaggtat acgctctaaa gaagaagtta aagctttgct tgattgtgga gtaaaaagag
     4201 tagttatagg atctatggca attaaagatg cgactttatg tcttgaaatt ttaaaagaat
     4261 ttggtagtga agctatagtt ttagccttag atacgatttt aaaagaagat tatgttgtgg
     4321 ctgtaaatgc ttggcaagaa gcaagcgata aaaagcttat ggaagtttta gatttttata
     4381 gcaataaagg cttaaaacac atactttgca cagatatttc aaaagatggt accatgcaag
     4441 gagtaaatgt aagactttac aaacttatcc atgaaatttt tcctaatatt tgcattcagg
     4501 caagtggtgg agtagcgagc ttaaaagacc ttgaaaactt aaaaggaatt tgtagtgggg
     4561 ttatcgtagg aaaagcttta ttagacggag tttttagcgt agaagaaggg ataagatgtc
     4621 tagcaaatta agctacaaag aacttacttt agaaatttta aaacaaagtg acagaccttt
     4681 aagtgttaat gaaatttggc aaaaagctct tgaacaaggc ttagataaaa agctttctag
     4741 cataggacaa actccaattg ctactttagg ggctaggata tatgttgata taaaagaatt
     4801 gcaacacaat tctttgttta tcaaagcttc ccaaaaacct acaacttttt ggctaaaaga
     4861 aagagaaaat gaacttttaa agcttgataa taaaaatgaa attactaacg aaaaacaaga
     4921 aaaaaataaa tttcatgaaa gagatttaca ccccttgctt gtaaaatttt tatatgaaaa
     4981 tttagatttt aatttaaatt gcaaaacaat ttaccatgaa caaagcaaaa agggtaaagg
     5041 cggggaagat aagtggaatt atcctgatat tgtaggggtt tattttcctt atgatgatta
     5101 tgaaaaagag accataacac ttttagaaaa tatcaaacaa aatagttata agcttttttc
     5161 ttttgaactt aaaattgctt taaatttttc aaatttaaaa gaatgctatt ttcaagctgt
     5221 aagcaattct agctgggcaa atgaaggcta tttggttgtt ttacaagaaa ttgatagcga
     5281 agttttaagt gagttaagac gcttaaatca aagttttggc ataggagtga taaaacttga
     5341 aaaagatatt tcaaattctc aaattttaat tagtgcaaaa gaaaaagaac ttgatattca
     5401 aacactaaat atgctgatca ataaaaatcc aaattttaaa gaatttattg atgatataaa
     5461 caaacaaatt aaagtgggca aagaagcaaa aattcaagct aattttgatg aaattaaaag
     5521 cgatgaagaa atggaaaaat atcttaaaga aaaatgtatt ttggagaaat aaatgcttac
     5581 aaaacgcata attgcatgtt tagatgtcaa agatggcaga gtagtaaaag gaacacaatt
     5641 taaaaaccat aaagatatgg gagatatcat agagcttgct aggtattatt ctcaaaatgg
     5701 tattgatgag cttgtttttt atgatattgc tgcaagtgct agaaaagaac gcatatcaag
     5761 agaatgggta agtgaagtag caaaaaatat caatatttct ttttgtgttg cagggggtat
     5821 taaaagcgaa gaagatgcag ctgaactttt ggctaatggg gcagataaaa tttctatcaa
     5881 ttctcctgct ttaaatgatc caagcctaat cacacgcctt gctaaaagct ttggcgtgca
     5941 atgcgtagta gtagggattg atagttttaa agatgaaaat ggaaatttaa aagtatttca
     6001 atacacaggg gatgaaaaaa caagtaaaca tagtggaaaa agcactttag aatgggttaa
     6061 aaaagtgcaa gatctaggtg caggcgaaat tgttttaaat atgatgaatc aagatggtgt
     6121 taaaaatggc tatgatttag aacaattaga agctgtatat aaaatttgta aagtaccttt
     6181 aatcgcaagt gggggagcgg gaaaaatgga acatttttta gaagctttta aactaggtat
     6241 agatggggct ttagctgctt ctgtttttca tcaaaaactt atagacatta aagaattaaa
     6301 aatttatctt aaaaatcaag gcttaagtat aaggatataa tatgcaaaat ttcaaagaac
     6361 ttaatgaaaa aatcgcttgg caaaaagtgg ataatctttt acctgtcatc atccaagatg
     6421 caaaaacttg cgaagtttta atgctaggct ttatgaataa tgaagcctta gaaaaaagct
     6481 tagaaagtgg caaagtagtc tttttttcac gcacaaaaca gcgtctttgg atgaagggtg
     6541 aagaaagtgg aaatttctta aatatcatag atttaagctt agattgtgat aatgacacgc
     6601 ttttaatttt agcaaatcct gtagggccta cttgtcatac gggcgatatt tcttgttttg
     6661 aaaaaatttc taaaaatgca gattttgttt ttctagccag acttgaaaaa cttattaatg
     6721 cacgcaaaaa tgccgatgaa aatacttctt atacagcaaa acttttcaaa agtggtacaa
     6781 aacgcatcgc acaaaaagtt ggtgaagaag gcgtagaaac agctttagca gcgacagtaa
     6841 aagataaaga agagcttatt tgtgaagcag cggatttaat gtatcattta agtgttttac
     6901 ttgcagatgc aaatcttagt ttctcagatg tgatttcaaa attaaaagaa agacataaag
     6961 cttaaagctt tatgtaaaat aaatttatat caatgcaagg cttcattaag tttgactgct
     7021 tttttattta aagctactat catagcacca cttatagaat cttgacggaa atgtagccca
     7081 tttaaacctt taagctctaa gcctttgtaa atttctttat caaaattaaa ataaggatta
     7141 agtttagcaa gttcttcggc atctttgagt aaaaatttcg ttccttctag cactgcaata
     7201 cctgcatcaa ctatacaatt atcccctaaa ggaattcctg tcactgaatt agcccctaaa
     7261 agacaagcct tgcctacgct tatagcattg ccacttgttc cacttaaaac acctaaaatc
     7321 gaagctccgc cacctacatc agaaccttct cctactatag cacttgaact aatacgccct
     7381 tcaaccatac aagctcctgt tgtacctgca ttaaaattca cataacttgc ccctggcatg
     7441 atggttgttc ctgctgctaa agacgcaccc attcttactt tagaactttc taaaattctt
     7501 gtattatcct cagggataat atgtgctaaa aatcttggga atttatcaac aaaatcgatt
     7561 tttggatatt gattgctcat ttttaaacgc atttcatttg ctcttaaata ctcaagctcg
     7621 ataggcttat catcactcca agctacattg cttaaaagtc caaaagctcc atttaaattg
     7681 atacttctta aaggtacttt tttagtagaa agcaaataaa gttttagata aatactttct
     7741 acacttaaag gttctttatc ttcaaaaaga caaacaaaag aaaattcatc gtctttaaat
     7801 ttatctttga taatctttaa taaatcaata ttttgatgcc catcttcttc taaaaaaggt
     7861 ttaaaacaag aaagtgcaaa atcaatatct tctaatttca aagtttgcac aaactcactc
     7921 gcattaaaat caatctccac gcccctttgc ataaaagctt caagcatgat tgccgctgag
     7981 ccaaaatttt gctcatagtt aatcaaagca aaacttgctt gtaagatttt atttttattt
     8041 aactgtcctc tatcaagcct tgctatacca aaagctttag gttttttata gccacttttt
     8101 tgctcgattt gtttgattaa aagtaaaaaa tcttctttag tattaatcat tttcttttcc
     8161 ttatccactt aatttttaat gcgaacacgc actttttcca ttcatcacag gttgtatagc
     8221 agaattatcc gcaccacctt cattgttaat tttttctata aagctccaaa ttttttcagc
     8281 cgccattaaa taacgctttg aactcacact ttcagggtga taaaaactca caggcttgcc
     8341 ttcatctcca ccttctctta ctatcatttc tataggaatt tgtgctaaga cttcactttt
     8401 ataggctttt gccatatcct cagccgttcc tttgccaaaa atatcatact ctttaccgtt
     8461 atcaggacat aaaaatccac tcatattttc aatcacaccc gctataggaa tgtgaagttt
     8521 attaaacata tctaaagctc ttttactatc gtctaaagat acggtttgag gcgtacttac
     8581 acaaactcct gcagcaatag gaatgctttg tgcagaagta atttgcgcat cgcctgttcc
     8641 tggaggcata tccaaaaaca atacatcaag ctcaggccaa attacatcag ctaaaagttg
     8701 ctcaattgct ttcatgatca tagctccacg ccacataagg ccttgaccct cttcgatcaa
     8761 aacccccata ctcatcatat aaacaccatg agttaaaata ggctttaatc tctgccctac
     8821 tacttcaggc tgagttttgg tttcacctag cattcttgga atatttggcc cataaatatc
     8881 cgcgtctaaa atacctactc tttttcccat tttagccatg gaaattgcta aatttactgt
     8941 agttgtagat ttacccacac caccttttcc acttgaaacc atgatgaaat tttttacttg
     9001 tggagcgata ttttttccac ttcttgaatt acttttttct tcaggaattt ttggagtaat
     9061 gatattaagt tcaatatttt ttaaagccaa actcgataaa gcttcaatag tatttttacg
     9121 aatttcatta gctacttcag gatttgctga aacgatttct atatcaatga atacaccatc
     9181 atcttgaatt ttaatatctt ttacaaagtt aaaactcact atatcctttt caaaaccagg
     9241 atattttaca gtttttaatt tctctaaaat ttgttctttc atattttttc cttgtctttt
     9301 aaaaaaatca attttactaa taaaatgata aaatttagct ttttataagt gtataatatg
     9361 gtaacattat aaaaaccaac aatattaaaa agaggaatga aaaaatgagt gaaatgagcc
     9421 tcattatgtt agcagctgga aattctactc gttttaatac aaaggtaaaa aaacaatttt
     9481 tacgacttgg aaatgaccct ctttggcttt atgcaacaaa aaatttaagc tctttttatc
     9541 cttttaaaaa aatagttgtt acctctagta atatcactta tatgaaaaaa tttaccaaaa
     9601 actatgaatt catagaaggt ggtgatacca gagcagaatc cttaaaaaaa gccttagagc
     9661 tcatagatag cgaatttgtt atggtaagtg atgtagcaag ggtattggtg agtaaaaatt
     9721 tgtttgatcg tttgattgaa aatttagata aagcagattg tattacccct gctttaaaag
     9781 ttgcagatac aacacttttt gacaatgaag ccttgcaaag agaaaaaatc aaactcattc
     9841 aaaccccgca aatttctaaa accaaattgc ttaaaaaagc cttggatcaa aacctagaat
     9901 ttacagatga tagcacagct atagctgcaa tgggtggaaa aatttggttt gttgaaggtg
     9961 aagaaaatgc aagaaaacta acctttaaag aagatcttaa aaaacttgat ttgcctacac
    10021 ctagctttga aatttttact ggcaatggtt ttgatgtgca tgaatttgga gagaatcgcc
    10081 ctttgctttt agcaggagtg caaattcatc ctactatggg gcttaaagca cacagcgatg
    10141 gagatgtttt agctcactct ttaaccgatg cgattttagg tgctgcagga cttggagata
    10201 taggagagct ttatcctgat actgatatga aatttaaaaa tgccaactcc atggagcttt
    10261 taaaacaagc ttatgataaa gtcagagaaa taggttttga actcattaat atagacattt
    10321 gcgtcatggc acaaagccct aaacttaaag actttaaaca agctatgcaa agcaatatag
    10381 ctcatacttt agatttagat gaatttagaa tcaatgttaa agccacaaca acggaaaaat
    10441 tgggttttat tggaagaaaa gaaggtatgg cggtgcttag tagtgtaaat ttaaaatatt
    10501 ttgattggac aagattatga aagttttaat tattgaaaat gaaatttatc tagcgcaaag
    10561 cattagcatt aaactaagtg atgctggata tagctgtgaa attattaact cgtttgatga
    10621 atacaatggt gaaaaatact atgacattat actgctttct acaaatacta ataattttct
    10681 aaaagccgta ggtcagttta aacatagtat tattattttg cttatttctt atataagtac
    10741 agatacagtt tcaaatcctt tgaaattagg tgctagtgat tatattcaaa aaccctttat
    10801 gatagaagag ctgattagaa aaataaagca ttatcaggat tttagaaaac tttcaatcct
    10861 taataaagct tatcaaagct atatcaaatc aagattagaa acaatcaaaa ttccagagta
    10921 taattataaa aaattaaaac ttccattgat attaaaatcc aacaagcaaa gcagtgctga
    10981 tgcttttgtt tttaattatg caaatgaatg tgacattact ctttctttta ttgatttaac
    11041 atctacaaat tcagttgaaa aagttatgaa acttcccaca gaaaacaatc ttttattttt
    11101 gagtaatttt caagcattaa aagcagcaga aaaggaaaaa ctcctagatt ttatacaaaa
    11161 caaaaatgtt attttgcata ccaattcaaa tacagatgat ttaaaaataa actgcattaa
    11221 tttaaatgat aatgaaaaaa atatcaatag caatgaaatt ttaactatag atgagtatgt
    11281 aaaatatgtt attataaatt accaaaatat atttcctgat actgatcttt caaaaaaatt
    11341 aggcatttca cgtaaatctt tatgggaaaa aaggaagaaa tatgaaatca gcaagaaaaa
    11401 ataaaaacat taccatagat caaaatgaat ttggcatctt atcacttatt aaagaaggtt
    11461 tgctaggcac ttgcactcat ttaatgaatg aaaaagaagt caatgaaatc attaaatcag
    11521 gaaaatttaa aggagaaagc tttccctatc ccttaagctt tgcaccaaaa aatgccgaag
    11581 aagcactaaa tgatataaaa tctggcgata gaatcgatct catgctagat gaaaaagtag
    11641 taggacatat agattttaaa agccaattta aaaataataa aaatttttct gatattttca
    11701 gtcctaacac ttgctcttta gaagacatgg gaacaacttg cataagtgga aaaatagaaa
    11761 tttataattc tcaaattgaa aaaataaaag aaaattttca acaaatcaaa aacaatctta
    11821 atgcacaaaa aattactgct atagtttcaa gttttgatcc tttgcatcgt gcccatgaaa
    11881 gaatgtttcg ttggactatt gataaagcag atttagttgt aatttttctt gtagaatctt
    11941 ttgatgtaaa tgggtttgaa ttcgaactta aagaagcata tttgaaaaaa tttattcaaa
    12001 actatcttcc accggataga attttcattt ttccattaaa aaatattaat atttttcacg
    12061 ctcatttaaa tcctggctta gaaagtatta tcgcaaaaag tctaggttgt accaaactag
    12121 tagtaggaca aaatcataca ggacttggaa tgttttatga tgataaccaa ccaaaaacca
    12181 tacttgatga tttttccaag gactatggca tagaagtgat cgttttgcct gaatttgtat
    12241 tttgcgatca atgtcgcatg attgttagca caagatcttg ccctcatggt tgtcatcacc
    12301 atttgcacta taattctcag tctttaaaag atttactaag agcgggtatc attcctccag
    12361 caattttcat acgcaaggaa gtatctagtg ttattttaac ttctcttttt ccaaatagat
    12421 taaaaaatat gcaaaaaatt tataatgagc tttttccaac tgatggaatt ttagaataca
    12481 aaaatgatga agaattttat caaaaacttt tagaaattca tcaaatgtct tatatggtgt
    12541 aataaaatgc aaaaattatt tttaactttt ttttattcag gttctgtaaa aaaggcaagt
    12601 gggacttttg gtactatcgc tgctttaata cctgcttttt ttatacttaa atatctcggg
    12661 attaatactt tgtttttact aagcatttta atttttgttg caagtattcg tgttatagat
    12721 gattatgaaa aaaaaacagg aattcacgat gacaaacaca tagttatcga tgaggttgct
    12781 ggagtttttc ttgcttgtgc tattgcagca agtgttgaaa actcgatagt caattttatt
    12841 ttggcttttg ttttattcag actctttgac attacaaaac cttctattat tggtaagata
    12901 gataaaaaag tcaaaggcgg actaggtgta atgcttgatg atatgttagc aggattgttt
    12961 gctggacttt taagtgcggt aatttatgga tttttactta aatttaattt agttttttgg
    13021 gatataaatt taaaagattt attttgaaat tttgcttaaa ttaattaaat tttaaatttt
    13081 attcttatat aatttagtct ttaatttcaa aaaaggaaaa tataaatggc aaaccataaa
    13141 tctgctgaaa aaagagcaag acaaactatt aaaaaaacag aaagaaatag attctataga
    13201 acaagactta aaaatataac taaagccgta agagaagctg cagcaaatgg aaataaaaat
    13261 gctgctaatg aagctttaaa agtagctaat aaaagcattc atgctatggt aagtcgcggt
    13321 ttcattaaaa aacaaactgc ttctcgccgt gtaagccgct tagccctttt agtaaataaa
    13381 atcgcataat tttctatata gtttttaatg ttagctagca aactagatcc tttttttaaa
    13441 cgctttgaag agttaaattc tcttcttagc agttctgata tactcaacga tatcagtaaa
    13501 atgactacac tctctaaaga acaaaaaaat ttagaaccta tcgttttaaa agctaaagag
    13561 tatttaaaaa ctttagacaa tatagaagaa aataaagctt tgctaaacga tccagaactt
    13621 ggggaacttg caaaagaaga actaaaaact ttagaagaat taaaaccgaa acttgaagaa
    13681 gagattaaaa ttttacttct tcctaaagat cccaatgatg aaagaaatat ttttcttgaa
    13741 attcgtgcag gcacaggtgg cgatgaggca tctttatttg tgggagatct tgtaaaagct
    13801 tatgcaagat atgctgaaaa tcgcggctat aaacttgaga ttgtaagctc tagtgaagga
    13861 agcgtaggtg gatttaaaga aatcatcatg cttgttaaag gaacaggggc ttattcaaga
    13921 cttaaatatg aaggtggaac gcaccgtgtt caaagagttc ctcaaacaga atcccaagga
    13981 cgcgtgcata cttctgctat caccgtggca gtaatgccag aagttgatga tatagaaatc
    14041 gaaatcaatc caaacgatct taaagttgat gttatgcgat cttcaggaca tggtggacaa
    14101 agtgtaaata ctactgattc agctgttcgt atcactcata tccctacagg tatagttgta
    14161 gtcaatcaag atggaaaaag ccaacacaaa aataaagaaa gtgcgatgaa agtcctaaaa
    14221 gcaaggcttt atgaaatgca agagagtgaa agactagcaa aagaaagtga agcaagaaaa
    14281 tcacaagtag gaagcggaga tagaagcgaa cgcattcgca cttacaattt tccacaaaat
    14341 cgtatcagcg atcatagaat aaatcttact ttatatcgct tagatgccat tatgcaagat
    14401 gggctttttg atgaaatcat agaaccttta atcactcatc atcaagccca agctttacaa
    14461 gaacaaaatt tataagattt tatataaatt aatgcttatg taggaattta tgtggatttc
    14521 cactagcacc tacatgtgca acatttccat tttctatatc ataagcttga ccaaaacctt
    14581 ttacaaagcg tcctttttta aattcaagct ttactagatg aaaatcaagc atcttgcgta
    14641 tagttttaat gcctccttct cctccggttt gtttttcaaa ctcatcataa atttgatcaa
    14701 atctttcacc tctctctaaa aagcttgcat ttactctata gcgcaatctt ttacgaagta
    14761 taacagaaac agctttactc tcatcctcta aaaacattat ttctatattg tttggattta
    14821 ctttgatgtt gttaaaatgt tcacttactt cacttatata aatataattt ccccattgtg
    14881 tgcttacaaa aggtgcatac gagcaaacaa cttctccatt tgcatttaaa gttgccaaag
    14941 ctacagaatt aaaacttagc ataaattcat ttaattcttt ttctacacca ctaaaatttt
    15001 gctcgctctt tgcactcatg caaagggata ttatagcatc tttaatcgtg ttttcatcgg
    15061 cttttttagg aaattccact cgtaaatttt ctttatcatt gtaaacaaga tctaagccat
    15121 taaaatcaac actttttaga aaaacatctt gtacttgctc aataccacca aattttttac
    15181 aaagatcgac taaatttgat ttatgatgat cattcatatg agaaataatg ctttcaaaat
    15241 tcatttttat cctttcttga ttttaaaata aaatattaaa aaaaatggta tcaattatca
    15301 aattaaaaag cacttaaaat atataaatta tctattttaa
//
LOCUS       DAPIYB010000040        15064 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.040, whole genome shotgun sequence.
ACCESSION   DAPIYB010000040 DAPIYB010000000
VERSION     DAPIYB010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15064)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15064)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15064
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.040"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(155..1351)
                     /locus_tag="RJ318_000984"
     CDS             complement(155..1351)
                     /locus_tag="RJ318_000984"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDV7430867.1"
                     /translation="MYLFTSEVVSAGHPDKCADIIADTIVDILLKNDKNSRVASEVFV
                     AGNKVVIGGEVKSNHKLSKADYDNLVKDVLKNIGYDGAGHFSKEQCLHPDEVDVMVFL
                     NEQSPDINQGVDQEDGETGAGDQGIMFGFASCEAEEYMPAAISYARMLCDRVYAYAKA
                     NPHELGVDIKTQVTIDYGTKANFENCKPQSIHTIVVSAPCVESMKIEDLRSLVMKLIL
                     DSNLPKELFDPNKTRILINPTGKYVNHSSLHDSGLTGRKLIVDSFGGYSPIGGGAQSS
                     KDYTKVDRSGLYAGRWLAKNIVAAGLAKKCIVQLSYAIGVAKPTSVSVDCMGTNTSVN
                     DDVLSDFVMQNFSLTPNWIRDKFHLDKPSKETFLYADVAARGQVGQKDYPWEKLDALE
                     QFKKLL"
     gene            1492..2715
                     /gene="sstT"
                     /locus_tag="RJ318_000985"
     CDS             1492..2715
                     /gene="sstT"
                     /locus_tag="RJ318_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HDV7430868.1"
                     /translation="MFSKIIQSYAKGNLIVQICIGIALGILIGISSKEISEIANLLGI
                     LFTSALKAIAPMLVFILILTSICTKDFSQSGAKIKNIIILYIVGTFFASACAVLANFF
                     FPVKLVLDGVQTATNSSPTHMSDIFKDLLFKIVDNPINALSSGNYLGILTWAIAGGIA
                     LKHCSNEAKQVFIDINEGVLKIVKFVVKLAPFGIFGLVANSVAQTGAQGLLSYVKLLI
                     LLVATMLFVTFVINALIVFFYTRKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALC
                     AKLGIDKEFYGISIPLGATINMAGAAVTIAILSLTAANTVGIEISLLQAFLLSIIATF
                     AACGASGVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVIQDSVETALNSSTDVL
                     FTAICSKNELNYNIK"
     gene            2725..3612
                     /locus_tag="RJ318_000986"
     CDS             2725..3612
                     /locus_tag="RJ318_000986"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HDV7430869.1"
                     /translation="MRHLITTKDFNKVEIMELFKEASDFLDEKPRTFLEGKSITTIFF
                     ENSTRTLSSFESAARRLGARVLRLDVSRSSSSKGETLYDTAANLDAMSPNAIVVRHAN
                     SGVPLILAKHMHCPVVNGGDGKHAHPTQALLDLFTIYNHFQGNVEGKKICIVGDIKNS
                     RVAASNIELLSRFNLDITLVAPPHFMPNTHLKKHYKLDENIIANSDIIMSLRTQTERH
                     NKTVYASLKDYANDFCIQKSLVKDKKLILLHPGPVNRNIDISDEMMSNERTLVLKQVK
                     NGVAIRMAVLKKLILENEG"
     gene            3616..5337
                     /locus_tag="RJ318_000987"
     CDS             3616..5337
                     /locus_tag="RJ318_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HDV7430870.1"
                     /translation="MLEWDLSALFHDKEALQNFTQDQIQQSLNFKKNYENKLYTLNAN
                     EFLQALKDYENLNQALGKIMTYAYLLFAKNTQNGSFYAQYEEECKKIEENLLFFELEF
                     CELAPEKSREFTTFCKDYDFYLSNLLQNKRYNLSKNEERIMLYLSNTGANAFSRLFDE
                     SMSALKIPFEGKKLSEEEILSKMYDENRKIRKKAAKKFSKVLQKNSRLLSFIINMIKT
                     ERKNISLLRGYENAEISRHISNQISQKSVDSLIASAQKHFNLVSQFYKRKKQILGYDE
                     LKDYDRYAPIGKEASFDFKTSKNIVLEAFQAFSPQFYDIAKNAFDQGWIDVYPQENKQ
                     GGAFSHSATSDAHPFVLLNYTNKRRDLFTLAHELGHTIHQKLSYNVSYLNQNTPLTTA
                     ETASVFAEMLVFDFIKDKLKKEELLSLYANKIEDIFATFYRQINFTCFERRLHAQENE
                     LSTEEINKIWMEESQKMFQDSVKLTKNYASWWSYIPHFIHSPFYCYAYAYAQLLVLAL
                     YGLYKSKKCENFKELYIKMLSLGGSVSPKELVGMFGFDIEDENFWEIGIKEIQKLINE
                     FMELQSC"
     gene            5331..5768
                     /locus_tag="RJ318_000988"
     CDS             5331..5768
                     /locus_tag="RJ318_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430871.1"
                     /translation="MLETILKNENFIHTMQKHCYEVISHLIEENIEFSIVANTNFIDF
                     NPELPKELDIKQNPYALFALGGYTFESIQLNKDFIQFHAGFGNDDFDSFVKVDLGAIT
                     QIQVENSILFVNFSLYKREDSKNLQKSKNIFLNNPKNKDIFKK"
     gene            5765..7840
                     /locus_tag="RJ318_000989"
     CDS             5765..7840
                     /locus_tag="RJ318_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDV7430872.1"
                     /translation="MNLFEDLNDSQKQAVSHIDGAMLILAGAGSGKTKTITTRLAYLI
                     GEVGIPSHNTLTLTFTNKAASVMRHRALNFLQGNHNPLLCTFHKFGLLFLKLHFERLE
                     RKNSFIVIDTDDTKKIIKDLIHDKNKDNVYDIIQYISYCKNEGKRVSNVFEDLNLLKE
                     HNFEKYQNEYKFANYYRAYEEYLLKQNFVDFDDLLLLSNLILENDINFAKEQSLLYNY
                     ITVDEYQDTNTLQYKILKNLCCMHENITVVGDDDQSIYSWRGAKIENILNFQNDFKNV
                     KLVKLEQNYRSVGTILQAANNLISHNEQRLGKTLICTKDTGENIKILKNENEKDEGLY
                     IAQEVKKLLNSGVEAKEIAILFRVNALSRAIEEAFMKKQISYKLLSGMRFYERLEIKD
                     LISYLRLILNPSDDLSFKRIINRPKRSIGEKALKNLEEYAKKRQISLFDALCESDGGV
                     GILTTKKAQNEANIFIQNIHTLKSYDNAKKVFDNIEELFKIKDYFSEQDDGDERIRNL
                     DEFYANLREKLKEDPKASLEDLLSEISLLSDQDNLDEECVCLMSIHASKGLEFDYVFI
                     IGFDEGFFPLNSEENLEEERRLAYVGITRAKKFLTISVANSRFYHGSRANINPSRFLE
                     ESKLINEKSKNQNIQKTSFCKGDLVKHKIFGIGRVVEVNKSGKEEKLNINFGGIMRVI
                     MASFVEKAV"
     gene            7837..8655
                     /gene="truB"
                     /locus_tag="RJ318_000990"
     CDS             7837..8655
                     /gene="truB"
                     /locus_tag="RJ318_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDV7430873.1"
                     /translation="MNKIFAAFKPKGLSSNAFLSTLKKKYKNKKAGYSGTLDPFAKGV
                     LIVAFGQYTKLFRFLKKTPKTYKATLWLGVYSLSLDDQNIKEIQNIKEFDLANLKQII
                     DQMQGIISYTPPQFSAKRINGTRAYELAKKGIEANLKPCQMEVFDCKILSYNHPFLNI
                     EITVSEGAYIRSYCELFARKLGINATLSSLERIKEGKFVYNNEKSLNVLKYINLKPNF
                     IKDLNKLENGAKIFVEELEFHDEGDYYIETEKYFSIINIKENTVKYLLNKVEKC"
     gene            8649..8876
                     /gene="csrA"
                     /locus_tag="RJ318_000991"
     CDS             8649..8876
                     /gene="csrA"
                     /locus_tag="RJ318_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDV7430874.1"
                     /translation="MLILSRKENESIIIGEGIEIKVVQTGKGYAKIGIEAPKSLMILR
                     KELVQQVKDENLHSVVQNDIKLDDLSKKLIK"
     gene            8873..9640
                     /locus_tag="RJ318_000992"
     CDS             8873..9640
                     /locus_tag="RJ318_000992"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDV7430875.1"
                     /translation="MKAYAKANIFLKLTGFDSRKYHLLESRFILLKDVFDELELIDKE
                     SDSKKEFEIISNFKCENNIIQKAYLLLSRRYNNELKELFSKKSLKLTKNIPVCAGLGG
                     GSSDCASFLLLINETLNLKLNLQELINLSIQLGSDIAFFLSGFHSANVSSCGEIIEEF
                     EDDIPNLKWTFPQISCQTKAVYDEFDRGIFDFQKNNNQAQIYKKLSTKELLQNFKNKE
                     LNDLFTPCATLYPKMKSYLQEDFFLSGSGSSVFKVDR"
     gene            9637..10089
                     /gene="smpB"
                     /locus_tag="RJ318_000993"
     CDS             9637..10089
                     /gene="smpB"
                     /locus_tag="RJ318_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDV7430876.1"
                     /translation="MKIIARNKKALFDYSIIERFEAGIVLKGSEVVALRAGRANLKDS
                     FVRIIKNEIFLLNSHISLLHTTHSFYKHEERGARKLLMHRKQIDKLLGKVSIEGYTIV
                     ALDLYFNTKNKVKATLALAKGKNLHDKRETLKKKQADLEARAAMKNYK"
     gene            10100..10702
                     /locus_tag="RJ318_000994"
     CDS             10100..10702
                     /locus_tag="RJ318_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDV7430877.1"
                     /translation="MKKISALFLISLAFFLNACSKEEEIQNDFMFEEYHKGDKIVLNS
                     VNGGSKTLIRTDKGFVVEGEEGKVLMFDFFGTFCTPCKEEALDLSKLWKNNSSKFIII
                     GLTHFEDVSDETVKKFAGDYGAYYFLSNGSSNDRIIAQILKDIDYQNMEQLPFKVVLK
                     NGIYQKISDYWNNNTPTNFYLGKIPTELMQEDLNKIYKGK"
     gene            10702..10992
                     /locus_tag="RJ318_000995"
     CDS             10702..10992
                     /locus_tag="RJ318_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HDV7430878.1"
                     /translation="MPKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQN
                     LEKASQTMLEIHHNGSGICGIYTQEIALSKQKKVMDAAKLANFPLQAKVEEE"
     gene            10989..13118
                     /locus_tag="RJ318_000996"
     CDS             10989..13118
                     /locus_tag="RJ318_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7430879.1"
                     /translation="MKYQENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLSTDFKD
                     IFEEFSDGDLELLETELKNYISQNNQVIKQEIEPTISVVLDEILLSSKNKNNEIKIID
                     FLEKLIQDSRSYSSYLLKKHNINLNKIQELQNHENIQNLNNHTSDLTLLAQNGKIDPL
                     IGRKFELERMMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIAEKKVPKNLQNAKIF
                     SLDMASILAGTKYRGDFEKRIKEILSELEKIPNAILFIDEIHTIVGAGSTGESHTDFS
                     NLLKPALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGLK
                     NKYEEFHHIKLNDEILQYAVIWGKKFFNDKFLPDSAIDLIDELGASFALNPRAKKNAN
                     LKDLENVLAKMTHHHKMFEFDQNKALMNLKTNLKAKIFGQDEVIDSLVSSLKQSFAGF
                     KNSNTPRGVFLFTGSSGVGKTELCKALAEFLGLNLERFDMSEYAEKHAISKLIGSPAG
                     YIGFEEGGLLSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFK
                     NTIIIMTSNLGLKESNELGFLSKNEEKSNRAIKDFFAPEFINRIDKILHFNDLNDAIL
                     VKIIEKELDEISKNLNNIKLSVDDKAKIYLAKKAYNKEFGVRLLKRIISEEIGEKISD
                     EILFGKLKKGGIAKIKLGKNEKLEFIF"
     gene            13093..13740
                     /locus_tag="RJ318_000997"
     CDS             13093..13740
                     /locus_tag="RJ318_000997"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HDV7430880.1"
                     /translation="MKSSNLYSKLLNAPKNAPVFLSQNLEADFIVKAYTFGLFPWTSK
                     PVTWWCPDPRCILIPNQIHIQKNMKKFINLYQIKLDYDFLKLITLCRDTRSQSWIDDE
                     FITTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKL
                     CDLLKPYDFIIDCQVYNQHLEFMGAHNISRKEFLNILKEKCNQESGFKNFKDLIT"
     gene            complement(13762..15051)
                     /gene="cetZ"
                     /locus_tag="RJ318_000998"
     CDS             complement(13762..15051)
                     /gene="cetZ"
                     /locus_tag="RJ318_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy taxis response protein CetZ"
                     /protein_id="HDV7430881.1"
                     /translation="MFGAKKNNTKIIEQLEKKCNGLGDILRSIGNTMAVIEFTTDGVI
                     LEANQNFLTTMKYSLSEIKGKHHSMFCLPEVVNSSAYSDFWKDLRDGKARSGLFRRIA
                     KGGIDVYLEANYLPISDNNGYVYKIIKFANDITQRHYEMLDLRNTIAAANRSMAIIEF
                     KPDGTIITANENFLRAMDFNIDEIKGKHHSMFCDSNYRHSKDYVQFWEDLREGKFQSG
                     KYIRYGRNNKKVYLEASYNPVKNDDGKIYKVIKFATDISEQVKKDQEKLRLISELAEK
                     NDNLTQDGDRVIENTVSNVQNIADMMSQSSNLVSSLNQQSDEIKSIIQTISDIADQTN
                     LLALNAAIEAARAGEHGRGFAVVADEVRNLAERTGHSVNEITTTINSIRNVTSQVVES
                     IKSGLEDVNQSVELAKEARECMEKIRESSAEVAKAMS"
BASE COUNT         5618 a         2264 c         2256 g         4926 t
ORIGIN      
        1 taccccaaag ctaaattaat ttagcttcct tcctaacttt tatatttatg agggatattg
       61 aaaaatatcc ctctaagtca aaaattaata taactttatt aattctttat aattatacaa
      121 gccttgttta agcttgtata atattgttaa ttttttaaag tagcttttta aactgttcta
      181 gagcatcaag tttttcccaa ggatagtcct tttgtcctac ttgcccacga gctgctacat
      241 ccgcataaag aaaagtttct ttacttggtt tatccagatg aaatttatca cggatccaat
      301 ttggcgttaa agagaaattt tgcattacaa aatcacttaa aacatcgtca tttacactgg
      361 tatttgtgcc catacaatcc acgcttaccg aagtaggttt tgcaacacct atagcataac
      421 taagttgaac tatacatttt ttagcaagcc ctgctgcaac tatgttttta gctaaccatc
      481 tacctgcata aagtccactt ctatcaactt tagtataatc tttgctcgat tgtgcgccac
      541 cacctattgg agaataacct ccaaaactat ctactataag ttttcttcct gttaaaccac
      601 tatcatgtaa agaagaatga ttaacatatt taccagttgg attgattaaa attctagtct
      661 tattaggatc aaaaagttct tttggtaaat tactatctaa gataagtttc atcactaaag
      721 atcttaaatc ttctattttc atactttcaa cacaaggtgc agaaactact atagtatgaa
      781 tactttgcgg tttacaattt tcaaaattcg ccttagtgcc ataatctata gtcacttgag
      841 ttttaatatc cactccaagt tcatgtggat ttgcttttgc ataagcataa actctatcac
      901 atagcattct tgcataacta atagctgctg gcatatattc ctcagcttca caacttgcaa
      961 aaccaaacat aatgccttga tcacctgctc ctgtttcgcc atcttcttga tcgacacctt
     1021 ggttgatatc agggctttgt tcatttaaaa acaccataac atcaacctca tcaggatgta
     1081 aacactgctc tttgctaaaa tggcctgctc cgtcataacc aatgtttttt aaaacatctt
     1141 taactaaatt atcgtaatca gctttactaa gtttgtgatt tgacttaact tcgcctccta
     1201 tcacaacctt atttcctgcg acaaaaacct cactcgccac ccttgaattt ttgtcatttt
     1261 tcaagagtat atccactatc gtatcagcga ttatatcagc gcacttgtct ggatgacctg
     1321 cacttacgac ttctgaagtg aatagataca taaaaagtcc tttcatttaa aatgaaccac
     1381 aattgtatcc aaataaactt atcaaagctt gataaattaa aaattctcta aaattaagca
     1441 aaagttagtt aaaatcaact tttgatataa aaaatattta ataaggtttt tatgttttct
     1501 aaaatcattc aaagctacgc taaaggcaac ctcatagttc aaatttgcat aggtatagca
     1561 ctaggaatac ttataggcat tagctctaaa gaaatatctg aaattgcaaa tttacttgga
     1621 atacttttta caagtgcctt aaaagctatc gctcctatgc ttgtttttat tttaatttta
     1681 acctcaattt gcactaaaga tttttctcaa agtggtgcta agatcaaaaa tattatcatt
     1741 ttatatatag taggcacctt ttttgcttca gcttgtgcag ttcttgctaa ttttttcttc
     1801 cctgtaaagc ttgttttaga tggagttcaa actgctacaa actcatctcc aacccacatg
     1861 agtgatattt tcaaagatct tttatttaaa attgtcgata atcccataaa tgctctttca
     1921 agcggaaatt atttaggaat tttaacttgg gcaatagctg gaggtatagc attaaaacac
     1981 tgttctaacg aagcaaaaca agtttttata gatatcaatg aaggggtttt aaaaatcgtt
     2041 aaatttgtag taaaacttgc cccttttgga atttttggac ttgtggctaa ttctgtagca
     2101 caaacaggag cacaaggttt gctaagctat gtaaaacttt taattttact tgtagctact
     2161 atgctttttg ttacttttgt tatcaatgcc ttaatagtct ttttttatac aagaaaaaat
     2221 ccttttcctt taatttttat ctgcttaagg cacagtgcat tttttgcctt ttttacaaga
     2281 agttcagcgg caaatattcc tgtaaatatg gcactttgcg ctaaacttgg catagataaa
     2341 gaattttatg gcatttctat acctttagga gctactatca acatggcagg agcagcagtt
     2401 actatagcta ttttaagtct tactgcagcc aataccgttg gtatagaaat cagtctttta
     2461 caagcctttt tattaagcat tattgccacc tttgcagctt gtggggctag cggagttgcg
     2521 ggcggatctt tactgcttat acctttggct tgttctttat ttaatataga ctatgatatt
     2581 gctatgaagg tagttgccat aggttttatt ataggggtta ttcaagatag tgttgaaact
     2641 gctttaaata gttctacaga tgttcttttt acagcaattt gttctaaaaa tgaattaaat
     2701 tacaatatca aataaggtaa aaacatgcgt catctcatca ctacaaagga ttttaataaa
     2761 gtcgaaatta tggagctttt taaagaagca agtgatttct tagatgaaaa acctaggact
     2821 tttcttgaag gaaaaagcat cacgacaatt ttttttgaaa actctacacg caccctttca
     2881 tcttttgaaa gcgctgcaag aagattaggt gctagggttt tacgccttga tgtttcaaga
     2941 tcaagctcta gcaaaggaga aactctttat gatactgctg ctaatttaga tgccatgagt
     3001 cctaatgcta ttgttgtaag acacgcaaac tcaggagttc ctttgatatt agcaaagcat
     3061 atgcattgtc cagttgttaa tggaggagat ggaaaacacg cccatcctac ccaagcttta
     3121 ctcgatttgt ttacgattta taatcatttt caaggtaatg ttgaaggtaa gaaaatttgc
     3181 atcgtaggtg atatcaaaaa ttcccgcgtt gcagcgtcca atatagagct tttaagtaga
     3241 tttaatcttg atattaccct agtagctcca ccacatttta tgcctaatac ccatcttaaa
     3301 aaacattata agcttgatga gaatatcata gcaaattcag atattatcat gagtcttaga
     3361 acacaaacag aaagacataa taaaaccgtt tatgcttcac ttaaagacta tgcaaatgat
     3421 ttttgcattc aaaaaagctt agtaaaggat aaaaagctta ttttactaca tccaggccct
     3481 gtaaatcgca atattgacat aagcgatgaa atgatgagca atgaaaggac tttagtttta
     3541 aaacaagtta aaaatggagt ggctattaga atggctgttc ttaaaaaact catactagaa
     3601 aatgaaggat aaaaaatgtt agaatgggat ttaagtgctt tatttcacga taaagaagca
     3661 ttgcaaaatt ttacacaaga ccaaatccaa caaagtttaa attttaaaaa aaactatgaa
     3721 aataaacttt atacattaaa tgctaatgag tttttacaag ctttaaaaga ttatgaaaat
     3781 ttaaatcaag cccttggcaa aatcatgact tatgcttatt tgctttttgc taaaaacact
     3841 caaaatggtt ctttttatgc acaatacgaa gaagaatgca aaaaaataga agaaaattta
     3901 ctctttttcg agcttgaatt ttgcgagtta gctcctgaga aaagtcgaga atttacaact
     3961 ttttgcaaag attatgattt ttatctttct aatttattgc aaaacaaacg ctataatctt
     4021 agcaaaaacg aagaacgcat tatgctttat ctttccaata caggtgcaaa tgcttttagt
     4081 agactttttg atgaaagtat gagtgcttta aaaatccctt ttgaaggtaa aaaacttagc
     4141 gaagaagaaa ttctaagcaa aatgtatgat gaaaatagaa agatacgcaa aaaagctgct
     4201 aaaaaattca gtaaagtctt acaaaaaaat agcagacttt taagttttat tatcaatatg
     4261 ataaaaacag aaagaaaaaa tataagctta ttaagaggtt atgaaaatgc tgaaatttca
     4321 agacatatca gcaatcaaat ttcacaaaaa agcgttgatt ctttgatagc aagtgcgcaa
     4381 aaacatttta acttagtatc gcaattttac aaaagaaaaa aacaaatttt aggctatgat
     4441 gagcttaaag actatgacag atatgcaccc ataggaaaag aagcaagttt tgattttaaa
     4501 acaagtaaaa atattgtttt agaggcattt caagcttttt ctcctcaatt ttatgatata
     4561 gcaaaaaatg cttttgatca aggttggatt gatgtttatc cgcaagaaaa taaacaaggg
     4621 ggtgcttttt cgcattctgc aacttctgat gcacatcctt ttgttttatt aaactacacc
     4681 aataaaagac gcgatctttt tacacttgca catgaattag gacacactat ccatcaaaaa
     4741 ctttcttata atgtaagcta tttaaatcaa aatacacctt taaccaccgc agaaacagct
     4801 tcagtttttg ctgaaatgct cgtatttgat tttattaaag ataagttaaa aaaagaagaa
     4861 ctcttatctt tatatgcaaa taaaatcgaa gatatttttg caacttttta tagacaaatt
     4921 aattttactt gttttgaaag acgcttacat gctcaagaaa atgaacttag cactgaagaa
     4981 atcaataaaa tttggatgga agaatctcaa aagatgtttc aagacagcgt aaaacttaca
     5041 aaaaattatg cttcttggtg gagttatatt cctcatttta tccattctcc tttttactgc
     5101 tatgcttatg cttatgcaca acttttagtt ttagctcttt atggacttta caaaagtaaa
     5161 aaatgtgaaa attttaaaga actttatatc aaaatgcttt ctttaggtgg aagcgtgagt
     5221 ccaaaagaac tagtaggaat gtttggattt gatatagaag atgaaaattt ttgggaaata
     5281 ggcataaaag aaattcaaaa actcatcaat gaattcatgg agttacaatc atgctagaaa
     5341 caatcttaaa aaatgaaaat tttatccata ccatgcaaaa gcattgttat gaagttattt
     5401 cacaccttat agaagaaaat atagaatttt ccatagttgc aaatacaaat ttcatagatt
     5461 ttaaccctga acttcccaaa gagcttgata ttaaacaaaa tccttatgct ctttttgctc
     5521 ttggaggata cacctttgaa tccatacaac taaataaaga tttcattcaa tttcacgcag
     5581 gttttggaaa tgatgatttt gatagttttg taaaggttga tttaggagct atcacgcaaa
     5641 ttcaagtaga aaatagcatt ttattcgtta attttagtct ttataaacgt gaagatagca
     5701 aaaatttaca aaaatctaaa aatatatttt taaataatcc aaaaaataaa gatattttca
     5761 aaaaatgaat ctatttgaag atttaaatga tagtcaaaaa caagcggtaa gccacattga
     5821 tggagccatg cttatcctag caggcgcagg tagtggaaaa accaaaacta tcaccactcg
     5881 tcttgcttat cttatcggtg aagtaggcat cccctcacat aacactctta ctcttacttt
     5941 tacaaataaa gcagctagtg ttatgcgtca tagagcatta aattttctac aaggcaatca
     6001 caatcctttg ctttgcacct ttcataaatt tggactttta tttttaaaac tccattttga
     6061 aagattggag cgtaaaaata gttttattgt tatcgataca gatgatacaa aaaaaataat
     6121 taaagactta atccatgata aaaacaaaga taatgtctat gatattatcc aatacatatc
     6181 ttattgcaaa aatgaaggca aaagagtaag caatgtcttt gaagatttaa atttactaaa
     6241 agaacataat tttgaaaaat atcaaaatga atacaaattt gccaactatt accgtgctta
     6301 tgaagaatac ttattaaaac aaaattttgt agattttgat gatcttttat tgctaagcaa
     6361 tctcatttta gaaaatgata taaattttgc caaagaacaa agcttacttt ataattacat
     6421 tacagttgat gagtatcaag atactaatac cttgcaatat aaaattctaa aaaatctatg
     6481 ttgtatgcat gaaaatatca cagttgttgg tgatgatgat caaagtattt atagttggcg
     6541 tggagcaaaa attgaaaata ttttaaattt tcaaaatgat tttaaaaatg ttaaacttgt
     6601 aaaacttgaa caaaactatc gttcagtagg gactatttta caagcagcaa ataatctcat
     6661 atctcacaat gagcaacgac ttggaaaaac tttaatctgc actaaagata ctggggaaaa
     6721 tattaaaata ttaaaaaacg aaaacgaaaa agatgaaggt ttatatatcg ctcaagaagt
     6781 gaaaaaattg ctaaattctg gagtagaagc taaagagatc gccattttat ttcgagttaa
     6841 tgcactatca agagcaatag aagaagcatt tatgaagaaa caaatttctt ataaactact
     6901 tagtggtatg cgtttttatg agagattaga aataaaagat ttaatctcgt atcttagact
     6961 tatcttaaat ccaagcgatg atttgtcgtt taaacgtatt attaatcgcc ccaaaagatc
     7021 cataggagaa aaagccctaa aaaatttaga agaatatgca aaaaaacgtc aaatttcact
     7081 ttttgatgcc ctatgcgaaa gcgatggtgg tgtaggaatt ttaacaacaa aaaaagcaca
     7141 aaatgaagca aatattttta tacaaaatat tcacactcta aaaagctacg ataatgcaaa
     7201 aaaggttttt gacaatatag aagaattatt taaaatcaaa gattattttt cagagcaaga
     7261 tgatggagat gaaagaatca gaaatcttga tgagttttat gctaatctaa gagaaaaact
     7321 caaagaagat cccaaagctt ctttagaaga tctacttagt gaaatttctt tattaagcga
     7381 tcaagataat ttagatgaag aatgtgtttg cttgatgagt attcatgcta gcaaaggttt
     7441 ggaatttgat tatgttttta taataggctt tgatgaagga ttttttcctt taaatagcga
     7501 agaaaatctc gaagaagaac gccgtcttgc ttatgttggc atcactcgcg ccaagaaatt
     7561 tctcacaata agtgttgcaa attctcgttt ttatcatggt tcaagagcaa atatcaatcc
     7621 tagtcgcttc ttagaagaaa gtaaattaat caatgaaaaa tcaaaaaatc aaaatataca
     7681 aaaaactagt ttttgcaaag gagatctagt taaacataaa atttttggca ttggcagggt
     7741 tgttgaagtt aataaaagcg gaaaagagga aaagcttaat attaattttg gtggtataat
     7801 gcgtgtaatc atggcaagct ttgtggaaaa agcagtatga acaagatctt tgcagccttt
     7861 aaaccaaagg gtttgagttc taatgccttt ttaagtactt taaagaaaaa atataaaaat
     7921 aaaaaagcag gatattctgg cactcttgat cctttcgcca aaggggtttt aatcgttgca
     7981 tttggacaat acacaaaact tttccgtttt ttaaaaaaaa ccccaaaaac ctataaagct
     8041 actttatggc ttggagttta ctccttaagt cttgatgatc aaaatataaa agaaattcaa
     8101 aatataaaag aatttgatct tgcaaattta aaacaaatca ttgatcaaat gcaaggaatt
     8161 atctcctata caccacctca atttagcgcc aaaagaatca atggaactcg cgcctatgaa
     8221 cttgcaaaaa aaggtataga agcaaattta aaaccttgtc aaatggaagt atttgattgt
     8281 aagatcttaa gctataatca tcctttttta aatattgaaa tcacagtcag tgaaggtgct
     8341 tacataagat cttattgtga actttttgct agaaaactag gtattaatgc gactttaagc
     8401 tctttagagc gcattaaaga aggcaaattt gtttataata atgagaaaag cttaaatgtg
     8461 ttaaaataca ttaacctaaa gccaaatttt atcaaggatt taaataaact cgaaaatggt
     8521 gctaaaattt ttgtcgaaga attagaattt catgatgaag gagattatta tattgaaaca
     8581 gaaaaatatt ttagcataat taatattaaa gaaaatacag taaaatatct tctaaataag
     8641 gttgaaaaat gttaatatta tcaagaaaag aaaatgaaag tataattatc ggagaaggta
     8701 tagaaatcaa agtcgttcaa acagggaaag gatatgccaa aataggtata gaagctccaa
     8761 aatcccttat gatacttaga aaagaacttg ttcaacaagt aaaggatgaa aatttgcatt
     8821 ctgttgttca gaatgatatt aaacttgatg acttaagcaa aaaactaatc aaatgaaagc
     8881 ttacgctaaa gcaaatattt ttttaaaact taccggtttt gactcaagaa aatatcatct
     8941 tttagaatca cgatttatac ttttaaaaga tgtttttgat gagcttgagc ttattgataa
     9001 agaatcagat tctaaaaaag aatttgaaat cattagtaat tttaaatgcg aaaataatat
     9061 tattcaaaag gcttatttgc tactttctag aagatataat aacgaattaa aagaattatt
     9121 tagcaaaaaa agtctaaaac tcacaaaaaa tatcccagta tgtgctgggc ttggtggtgg
     9181 aagtagcgat tgtgcgagtt ttttactact aataaatgaa accctaaatt taaaattaaa
     9241 cctacaagaa cttataaatt taagcataca actaggaagt gatattgcct tttttttaag
     9301 tggctttcac tctgctaatg taagtagctg tggcgaaatt atagaagaat ttgaagatga
     9361 catacctaat ttaaaatgga cttttccaca aatatcttgc caaactaaag ctgtttatga
     9421 tgaatttgat agaggaatat ttgactttca aaaaaacaat aatcaagcgc aaatctacaa
     9481 aaaactcagc acaaaagagt tgttacaaaa ctttaaaaac aaagaattaa atgatttatt
     9541 tactccttgt gcaactttat atcctaaaat gaagtcttac ttgcaagaag atttttttct
     9601 aagcggtagc ggtagtagtg tttttaaggt tgatcgatga aaattattgc gagaaataaa
     9661 aaagctttat ttgattatag catcatagaa cgctttgaag ccggaattgt ccttaaagga
     9721 agtgaagttg tagccttaag agcaggaaga gcaaatctta aagactcttt tgttcgcatt
     9781 ataaaaaatg agattttttt acttaattct catatttcat tgcttcatac tacacattct
     9841 ttctataaac acgaagaaag aggtgctaga aagcttttaa tgcatagaaa gcaaattgat
     9901 aaattattag gtaaagtaag tatagaagga tatactatcg ttgcattaga tctttatttt
     9961 aacacaaaaa ataaagtaaa agctaccctt gctttagcta aagggaaaaa tttgcacgac
    10021 aagcgtgaaa ctttaaagaa aaagcaagcc gatttagaag ctagagctgc tatgaaaaat
    10081 tacaaataaa ggaaaataaa tgaaaaaaat ttcagcccta tttttaataa gtttagcatt
    10141 ttttcttaat gcttgctcca aggaagaaga aattcaaaat gattttatgt ttgaagagta
    10201 tcacaaagga gataaaatag tcttaaatag tgtaaatggt ggaagcaaaa ctttaataag
    10261 aacagataaa ggttttgtgg tggaaggaga ggaaggaaaa gttctaatgt ttgatttttt
    10321 tggcactttt tgcaccccat gtaaagaaga agctttagat cttagcaaac tttggaaaaa
    10381 taattctagc aaatttatca ttataggact tacacatttt gaagatgtta gcgatgaaac
    10441 agttaaaaaa ttcgcgggtg attatggtgc ttactatttt ctaagcaatg gcagctctaa
    10501 tgatcgtatt attgctcaaa ttttaaaaga tatagactat caaaatatgg agcaacttcc
    10561 ttttaaagtt gttttaaaaa atggaattta tcaaaaaata agcgattact ggaataataa
    10621 tactccaaca aatttttatc ttggtaaaat tccaacagaa ctcatgcaag aagatttaaa
    10681 taaaatctac aaaggaaaat aatgccaaaa acccaaactc tagagcaaac aaaacttagt
    10741 gaaccaaaaa tgtataaagt tatactctta aatgatgatg taacaaccat ggattttgtc
    10801 atagaaattt tgatgaatat ttttcatcaa aaccttgaga aagcaagtca aacaatgtta
    10861 gaaattcatc acaatggttc tggaatttgt ggcatttaca cccaggaaat agctctttca
    10921 aaacaaaaaa aagttatgga tgcggctaaa cttgctaatt ttccactaca agcaaaggtg
    10981 gaagaagaat gaaataccaa gaaaatttac aaaaatatct tgataatgcc aaaaatctaa
    11041 gcttaataaa tcaccatgaa tttgttacct gtgagcatgt actgtttgca ttactaaaac
    11101 taagcactga ttttaaggat atatttgaag aattttcaga tggagatctt gaacttctag
    11161 aaactgaatt aaaaaattac atttctcaaa acaatcaagt tattaaacaa gaaatagaac
    11221 ctacaatatc tgttgtttta gatgaaatct tactttcatc taaaaataaa aataatgaaa
    11281 ttaaaattat agatttttta gaaaagctca tacaggattc aagaagttat tctagctatc
    11341 tcttaaaaaa acacaacata aatcttaaca aaattcaaga acttcaaaat catgaaaata
    11401 tacaaaattt aaacaaccac acaagtgatt taacactttt agctcaaaat ggcaaaattg
    11461 atcctttaat aggaagaaaa tttgaacttg aaagaatgat gcaaattctt tcacgtcgca
    11521 agaaaaataa tcctatttta gtaggagaag caggagttgg aaaaacagcc attgtagagg
    11581 gattagcatt ggctattgcg gaaaaaaagg tgcctaaaaa cttacaaaat gcaaaaattt
    11641 ttagtcttga tatggctagt atacttgcgg gaacaaaata ccgtggagat tttgagaaaa
    11701 gaattaaaga aattttaagt gaacttgaga aaatacccaa tgctatttta tttattgatg
    11761 aaattcacac tatagtagga gctggaagca caggagaatc tcatactgat ttttccaatc
    11821 ttttaaaacc agctctaagc aatggaactt taaaatgcat aggtgcaaca acttttatgg
    11881 aatataaaaa tacttttgat aaaaataaac ccctaagtcg ccgttttgct aaaataaatg
    11941 tagatgaacc aagccaagaa gaaagcttgc aaattcttaa aggattaaaa aacaaatatg
    12001 aagaatttca tcatatcaaa ttaaacgatg aaattcttca atatgctgta atttggggta
    12061 aaaaattttt taatgataaa tttttacctg atagcgctat agatctgatc gatgaacttg
    12121 gcgcttcttt tgctttaaat ccaagagcta aaaaaaatgc caatttaaaa gatttagaaa
    12181 atgttttagc aaaaatgacc caccatcaca aaatgtttga attcgatcaa aataaagctt
    12241 taatgaactt aaaaacaaat ttaaaagcaa aaatttttgg ccaagatgaa gttatagata
    12301 gccttgtttc atcacttaag caaagtttcg caggatttaa aaattccaat acaccacgcg
    12361 gagtgttttt gtttactgga tcaagtggag ttggaaaaac agaactttgc aaagctttag
    12421 ctgaattttt aggtttaaat ttagaacgct ttgatatgag tgaatatgca gaaaaacatg
    12481 ctataagtaa actaatagga tctccagctg gatatatagg ttttgaagag ggtggacttt
    12541 taagcaatgc tattcgcaaa aatcctttca gtcttgttct ttttgacgaa atagaaaagg
    12601 ctcatcctga tttaagcaat acctttttac agatttttga caatgctgaa ctcaccgaca
    12661 atagtggtct taaagtagat tttaaaaata caatcattat tatgacatct aatctaggac
    12721 ttaaagaaag caatgagctt ggttttttaa gtaaaaatga agaaaaaagt aatcgtgcta
    12781 tcaaagactt ttttgctcca gaatttatta atcgcattga taaaatttta cattttaatg
    12841 atttaaacga tgctatactt gttaaaatta tcgaaaaaga acttgacgaa atttctaaaa
    12901 atttaaataa tataaaatta tcagtggatg ataaagctaa aatttattta gctaaaaaag
    12961 cctataataa agaatttgga gtaaggcttt taaaacgcat aatttctgag gaaataggag
    13021 aaaaaatcag tgatgaaatt ttatttggaa agcttaaaaa aggtggtata gctaaaatca
    13081 aacttggtaa aaatgaaaag ctcgaattta tattctaaat tactcaatgc gcctaaaaat
    13141 gctcctgtat ttttaagtca aaatttagaa gctgatttta ttgtaaaagc ttatactttt
    13201 ggtctattcc catggacaag taaacctgta acttggtggt gtccagatcc tagatgcatt
    13261 ttaattccaa atcaaattca catccaaaaa aatatgaaaa aatttattaa tctctatcaa
    13321 attaaacttg attatgattt tttaaaatta attacattat gtcgcgatac acgctctcaa
    13381 agctggatag atgatgaatt tattaccact tattataagt tatttaccca aggctatgcg
    13441 catagccttg aactttatga aaataatgaa cttataggtg gaatttatgg tttaatttta
    13501 ggcaaggttt tctttggtga aagcatggta agcattaaaa aaaatgcatc taaagttgcc
    13561 atgattaaac tttgtgattt attaaaacct tatgatttta tcatagattg tcaagtttat
    13621 aaccaacatt tagaatttat gggtgctcat aatatttcta ggaaagaatt tttaaatatt
    13681 ttaaaagaaa aatgcaatca agaaagtggt tttaaaaatt ttaaagattt aattacttaa
    13741 aaataagcgt gaaaatcacg cttatgacat cgctttagca acttcagcag agctttcacg
    13801 aattttctcc atacactctc ttgcttcttt tgcaagttca acactctgat taacatcctc
    13861 taaaccgctt ttaatactct caaccacttg tgatgtaaca ttgcgaatag aattaatcgt
    13921 agtggtaatt tcattaaccg aatgccctgt tctttcagct aaatttctta cttcatcagc
    13981 aacaacagca aaacctctac catgttcacc agcacgtgct gcctcaatag cagcatttaa
    14041 agcaagcaga ttagtctgat cagcaatatc actaatagtt tgaataatag atttaatttc
    14101 atctgattgt tgatttaaag aggaaacaag atttgaactt tgagacatca tatcagcaat
    14161 attctgaaca tttgaaacag tgttttcaat tacacgatct ccatcttgag taagattatc
    14221 atttttttct gcaagttcgc ttatgagacg aagtttttct tgatcttttt taacttgttc
    14281 gcttatatct gtagcaaatt taataacctt gtaaattttt ccatcatcat ttttaaccgg
    14341 attataactt gcttcaaggt atactttttt attatttctt ccgtatctta tatatttacc
    14401 tgattgaaat ttaccctctc ttaaatcttc ccaaaattga acatagtcct tagagtgtct
    14461 ataattagaa tcacagaaca tactatgatg ctttccttta atctcatcaa tattaaaatc
    14521 catagctctt aaaaaatttt cattagccgt aataatagtc ccatcaggtt taaattcaat
    14581 aatagccata gaacgattag cagcagcaat agtatttcta agatcaagca tttcataatg
    14641 tctttgagtt atatcattgg caaatttaat aattttataa acataaccat tattatcact
    14701 aattggaaga taatttgctt ctaaataaac atctatccct cccttagcta tacgtctaaa
    14761 aagaccactt ctagcttttc catctcttaa atctttccaa aaatcactat atgctgaaga
    14821 attaacaact tcaggcaaac aaaacatact atgatgctta cccttgatct ctgaaaggga
    14881 gtatttcata gttgttaaaa aattttgatt tgcctctaaa ataacgccat cggtagtaaa
    14941 ttcaattacc gccatggtat tcccaataga tcttaaaata tctcctaaac cattacattt
    15001 tttttcaagt tgttcaatta ttttagtatt atttttctta gcaccaaaca taaaactcac
    15061 cttt
//
LOCUS       DAPIYB010000041        14281 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.041, whole genome shotgun sequence.
ACCESSION   DAPIYB010000041 DAPIYB010000000
VERSION     DAPIYB010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14281
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.041"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            60..1082
                     /locus_tag="RJ318_000999"
     CDS             60..1082
                     /locus_tag="RJ318_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430882.1"
                     /translation="MNLKIFSIIVGILIAVIVILGGTYYYLFEYSKPKNYTLNTNTYT
                     EQKSYTNNYDNPYSPSIQTNNSSSNVNTNNNTIQKQETNPLLDENQSLNNDTFNISIS
                     ENNQSLNNDTNTSNNINTNENKQILDTDKEKLKQENKQAKIEALKKEISKQQKILERE
                     RAIKKELQSNKSNKNKYLNTAREYLSIGKNSRLEPELSTENMKVYILDGKFLSQYRIN
                     LLKDMLSIIQDNAKDYYLSIFVKMLPKGEMKLTIYNKEIIFSDMKKAYKYISLDRLSP
                     YLNNPKELNEHVAREEILERLKLQIKKDGKGSDFSKHIKSLKTGLNTAQYFFPFCEII
                     EISSIK"
     gene            1105..3717
                     /locus_tag="RJ318_001000"
     CDS             1105..3717
                     /locus_tag="RJ318_001000"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDV7430883.1"
                     /translation="MYDKNLEKEYYQICEERGYFEIDGNKTIQEKDKNFCIMMPPPNV
                     TGVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNVVEKQLLAQGIKKE
                     ELGREEFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLVNAVKKAFVELY
                     DKRLIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKYFLKDSDEFLVVATTRPET
                     FFGDTAVMVHPDDERYAKFVDKEVILPISKKAIKIIADKHVEKEFGTGVVKVTPAHDM
                     NDYEVGLRHNLDFISVFDEKGILNEHCLEFQGLERLEAREKIVAKLESLGFIEKIEEY
                     NNQIGYCYRCNNIVEPYISKQWFVKKEIAQESIEKVALGESKFYPNHWINSFNAWMKD
                     LRDWCISRQLWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVLDTWFSSG
                     LWAMSTLGWGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQSTNVLHQ
                     LPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRDIKL
                     SNDKLLQVRNFTNKIYNAKNYLLLNESKFEDLENITLHSELAKYIYAKFQTCVKDVRE
                     NLDNYRFNDAANTLYKFFWDDFCDWGIELSKAEKSSVKELGSIFKEALKLLNPFMPFI
                     SEYLYHKLSDTELKTSPSIMISKYPKFKEQDKNIEKIFSLLIESIVSIRRAKSLIDLG
                     NSKIEKAYIKFNDKKIKDEIKAYMNFIIMLAKCEQIEFSEEKLPKAICDVSENLEIFI
                     TLENVDLSGILTRLENQKNKLEKESFKLNSMLSNEKFIANAPKEVVEQNKEALENLKI
                     QLEKISVELQNLRG"
     gene            3722..4732
                     /locus_tag="RJ318_001001"
     CDS             3722..4732
                     /locus_tag="RJ318_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDV7430884.1"
                     /translation="MIKIKNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLL
                     RCINGLENYQEGSLKVFDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENV
                     AMPLRTHYTQCKFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQ
                     RVAIARALALNPKILLSDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVK
                     DIAQKALLLEHGQIIGSGAIDELFLRPNAKMKEFLGESDFLPEHGLNIKLYFPKEVAQ
                     NSVITHMARTLNIDFNIVWGKIEKLNGKALGNLVININEKDKDKVLDYIEKSGVLWEV
                     AS"
     gene            4729..5640
                     /locus_tag="RJ318_001002"
     CDS             4729..5640
                     /locus_tag="RJ318_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7430885.1"
                     /translation="MNEENISIVSAFFSRISQFFNEFSWQDIKEVSLSSITSFNENYE
                     NILKPALNETIYMSLMAVLFGFLLAIIPGILLAIWDKNGIKENKIAYSILDFITNILR
                     AFPFLILIVVLLPLSKIIVGTSIGTNAAIVPLAIGIAPYLAKMLESAFKEIDKGIIEA
                     AKSYGASNIQIIFKVIFSEALPAIISGITLTLIFTIGFSALAGTVGGGGLGDVAIRYG
                     YERFNKEVMIQTVVILLILVQLVQILGNLFYTWAKNSKTTYIIATLLILLGVSIVINI
                     NNDENFFWQVIVFILFLGSLLYKGFKK"
     gene            5830..6603
                     /locus_tag="RJ318_001003"
     CDS             5830..6603
                     /locus_tag="RJ318_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7430886.1"
                     /translation="MKIKSLFIASILTLSLNANALETITVAATPVPHAEILEQVKPDL
                     EKQGYKLEIKEFTDYVLPNLAVDNGEADANFFQHTPYLEEFNKNKGTKLIKVAAIHIE
                     PMAVYSKKYKSLDDIKEGVKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDIID
                     NPKKIKFVELKPAQLPRALNDVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILV
                     VRVGHENDPKIKALIQALQSDKIKQFIIEKYNGSVLPAF"
     gene            6652..7422
                     /locus_tag="RJ318_001004"
     CDS             6652..7422
                     /locus_tag="RJ318_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7430887.1"
                     /translation="MNLFKIIILACILNLSSLFAQNITIGATPNPFGSLLELMKDDFK
                     NKGYELKIVEFSDYILPNRALEEKELDANLYQHKPFLEEYNLKKGSNLIATTPVLIAP
                     VGVYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKN
                     PKKLKFIELKAAQLPRALDDVDIAIINSNFALGAGLNPSKDTIFREDKNSPYVNYVVV
                     RSEGKNSEKTKVIDEILRSDKFKAIINEHYKDILIPAF"
     gene            7432..8208
                     /locus_tag="RJ318_001005"
     CDS             7432..8208
                     /locus_tag="RJ318_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7430888.1"
                     /translation="MNIKKIFLSVLFTISLSFGADKTIIIGATPTPYAEILNFSKPLF
                     QEKGWKLIVKEFNDYNIPNIALNEKDLDANLYQHKPFLDDFNTHKGTKLSSLGAIVLV
                     PMAIYSNSIKDIKDIPNGAKIAIPNDATNESRALDLLAKANLIEFKSQSTLKTPIDIS
                     KNPKKLKFIELKAAQLPRALNDTDLAIITTNYALGAGLNPLKDGIFMEDKDSLYAIVL
                     ATRKGEETSQKSLVIKEILTSDKIKNFIIEKYKGSVIPTF"
     gene            8292..8954
                     /gene="flgA"
                     /locus_tag="RJ318_001006"
     CDS             8292..8954
                     /gene="flgA"
                     /locus_tag="RJ318_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HDV7430889.1"
                     /translation="MKIIFLTFFIVINYIQAASLEEIKTALAKEFRNNFPKIIISQID
                     LKITSLPKDFDQYEFLRIANGRFNQAQGFLRAEFKTPQNIQKNVFFRYFIQANLEVLK
                     SERAIKRGDKLGAFDYKSVLIDFDKVPLNALTLDDVDNLVAKSNINKNAILRANMFKT
                     TALIRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKEGKVMQGIVVGKNRMI
                     IQ"
     gene            8951..9514
                     /locus_tag="RJ318_001007"
     CDS             8951..9514
                     /locus_tag="RJ318_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HDV7430890.1"
                     /translation="MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLNFKTE
                     NQANLEEICQENFKYTHFLDDKNLSLSVASGSFGIEKTIIAPCSISSLAKIHAGFADT
                     LLMRAAAVALKERKKLILGVREMPFSTLNLEHMLKLSQMGVIIAPPIIASYSKANNLE
                     QMENFIAGKWLDLLEIKHNLYEKWQNF"
     gene            9554..10030
                     /gene="coaD"
                     /locus_tag="RJ318_001008"
     CDS             9554..10030
                     /gene="coaD"
                     /locus_tag="RJ318_001008"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDV7430891.1"
                     /translation="MTCLYPGTFDPITNGHLDVIKRALKIFDEVIVAIAKSEHKKPCY
                     DLEKRKELALLATQNLKNVKIIAFDNLLVDLAKELKVNTIIRGLRAVSDFEYELQIGY
                     ANHALWEDMETIYLMPSLKHAFISSSIVRSIVAHGGDVSSLVPKEILPFLKDQSCM"
     gene            10021..10599
                     /locus_tag="RJ318_001009"
     CDS             10021..10599
                     /locus_tag="RJ318_001009"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDV7430892.1"
                     /translation="MYVVFEGIDCVGKSTQISLLKEIYKDAIFTLEPGGTELGKHLRE
                     ILLNKTHPINKRAELLLFLADRAQHFEEILKINQNKLIISDRSFISGMAYAKDFENDL
                     LFALNSFALENFFPQKIIFLKGDANLIQERLSQKELDSIEKRGIEYFLSVQDKLEKVL
                     HFLKEKISIEILTLDAKESKEKLHQQIKEFLQ"
     gene            10596..11822
                     /locus_tag="RJ318_001010"
     CDS             10596..11822
                     /locus_tag="RJ318_001010"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDV7430893.1"
                     /translation="MINALKGMKDLLDKDAYCYEKVIKTCEEVAKNYGFTFINTPHLE
                     LCTLFKRSVGESSDIVGKEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKR
                     WFYYGSMFRYERPQKGRLREFHQFGVESLGIPNVYEDASIILMLVEIFSRLGIDFKLQ
                     LNSLGCSQCLPKYRDRLVEFLDSKEGFCEDCLRRKNLNPIRVLDCKNEHCQNLLENAP
                     LLINNLCTSCQKDFETLQQILKDNGVKFELDSKLVRGLDYYSKTAFEFISDEIGAKAA
                     IAGGGRYDRLIEYLGGKSGYGIGFAMGIERIITILEQKEEKIQREGIYLCAMDEIYIQ
                     KLLYIATNLRKEYKVLLSYEARKLAKHLENADKNNTEIFLCMGENEAQNESLFYKNLA
                     KKEEKMIKISDLKKVL"
     gene            11819..13654
                     /gene="speA"
                     /locus_tag="RJ318_001011"
     CDS             11819..13654
                     /gene="speA"
                     /locus_tag="RJ318_001011"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HDV7430894.1"
                     /translation="MMDYGIDIWGNENFIIKNGKVCINYEKKPAIIDIVKELRDDGYK
                     GPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGK
                     DYNYGLEAGSKAELLLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGL
                     NELEAIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLL
                     KENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLA
                     VEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIA
                     PVLELFSQEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLF
                     DLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSM
                     PDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKEN
                     YFLGFFLVGAYQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDTLEDLDYD
                     IHAIMDILNERISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV"
     gene            13655..>14281
                     /gene="cysE"
                     /locus_tag="RJ318_001012"
     CDS             13655..>14281
                     /gene="cysE"
                     /locus_tag="RJ318_001012"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDV7430895.1"
                     /translation="MNFWGIIKEDFSQPKAQDPAFNSCIELFFNYPGVWAVVNYRFAH
                     FFYIRNFKRIARMISGISQFLTGVDLHPGAELGRRIFIDHANGVVIGQTAIIEDDVLI
                     YQGVTLGGTSLEKGTKRHPTIKKGVIIGSGAKVLGNITIGENAKIGSNAVVVKDIGAN
                     LTAVGIPAYIIEERKNKNIRAIDANCDDKLEKLEKKILELENLILKQPE"
BASE COUNT         5490 a         2016 c         2376 g         4399 t
ORIGIN      
        1 atattagatt atagtacaat gctaaaatta tttaactttc tatttttaag ggatagcaaa
       61 tgaatttgaa aattttttct attattgttg gcatattaat tgctgttatt gtaatattag
      121 gtggaaccta ttattatctt tttgaatatt caaaaccaaa gaattacacc ttaaatacca
      181 acacttacac cgaacaaaaa tcgtatacca ataactacga taatccctat tcaccctcga
      241 tccaaaccaa caatagttca tcaaatgtaa atactaacaa caataccatc caaaagcaag
      301 aaacaaaccc attattagat gaaaatcaaa gcttaaataa cgatacattt aatatatcaa
      361 taagcgaaaa caatcaaagc ttaaataatg acaccaatac aagtaataat attaatacaa
      421 atgaaaataa gcaaatttta gatacggata aagaaaaatt aaaacaagaa aataaacaag
      481 ccaaaataga agctcttaaa aaagaaatca gcaaacagca aaagatctta gaaagagaaa
      541 gagctataaa aaaagaactt caatcaaaca aatcaaacaa aaataaatat ctaaataccg
      601 ctagagagta tctaagcata ggaaaaaaca gtcgtttaga acctgagctt agcacagaaa
      661 atatgaaagt ttatatttta gatggaaaat ttttaagcca atacagaatc aatctgttaa
      721 aagatatgct aagcattata caagataatg caaaagatta ttatctaagt atttttgtta
      781 aaatgctacc aaaaggggaa atgaaattaa ctatctataa caaagaaatt atcttttcag
      841 atatgaaaaa agcttataaa tatattagtt tagatagatt aagcccatat ttaaacaatc
      901 caaaagaatt aaatgaacat gtagcacgtg aagaaatttt agaaagactt aaacttcaaa
      961 ttaaaaaaga tggcaaagga agtgattttt ctaaacatat caaaagtttg aaaactggac
     1021 ttaatacagc acaatatttc ttcccgtttt gtgaaattat agaaattagc tctattaaat
     1081 aagctaaaac aataaaggca aataatgtat gataaaaatt tagaaaaaga gtattatcaa
     1141 atttgcgaag aacgcggata ttttgaaatc gatggcaata aaaccataca agaaaaagat
     1201 aaaaatttct gcattatgat gcctcctcct aatgtcactg gagttttaca cataggacat
     1261 gctttaactt ttactctaca agatattatg acgcgttata aaagaatgga tggctataag
     1321 gttctttatc aaccagggct tgatcacgca ggtattgcca ctcaaaatgt tgtagaaaaa
     1381 caactccttg ctcaaggcat taaaaaagaa gaactaggta gagaggaatt tatagaaaaa
     1441 gtctgggagt ggaaagagca aagcggtgga aaaattttag accaaatgag aacactaggc
     1501 atcactcctg catggagtcg cttgcgtttt actatggatg aaggtttggt taatgccgta
     1561 aaaaaagcct ttgtagaact ttatgataaa agacttattg tacgtggaaa ctacatgata
     1621 aattggtgta ctcatgatgg cgctttaagt gatatagaag ttgaatacaa agaaaacaaa
     1681 ggaaaacttt atcatattaa atacttttta aaagatagcg atgaattttt agtagtagcc
     1741 acaacgcgtc ctgaaacttt ttttggcgat actgcagtta tggtgcatcc tgatgatgaa
     1801 cgctatgcta aatttgtgga caaagaagtg attttgccta taagcaaaaa agccattaaa
     1861 atcatagccg ataaacatgt agaaaaagaa tttggaacag gagttgtaaa agttactccc
     1921 gctcatgaca tgaacgatta tgaagtagga cttagacata atttagattt tataagtgtt
     1981 tttgatgaaa aaggaatttt aaacgagcat tgtttagagt ttcaaggttt agaacgctta
     2041 gaagcaagag aaaaaatcgt agccaaactt gaaagtcttg gttttataga aaaaatagaa
     2101 gagtataaca atcaaatagg atattgttat cgttgcaaca atatagttga accttatatc
     2161 tccaaacaat ggtttgtaaa aaaagaaatc gcccaagaaa gtatagaaaa agttgcgctt
     2221 ggagaaagta aattttaccc aaatcactgg ataaatagct ttaatgcttg gatgaaagat
     2281 ttaagagatt ggtgtatttc aagacaactt tggtgggggc atcaaattcc tgtgtattat
     2341 tgcgaatgct ctcatgaatg ggcaagccaa catacgccta aaacttgtcc aaaatgtcaa
     2401 agtcaaaatt tcaaacaaga tgaagatgtg cttgatactt ggttttcttc aggactttgg
     2461 gctatgagta ctctaggctg gggaaatgaa aattggggta aagataaaat ttggtctgaa
     2521 aaggatttaa aagattttta tcccaattct ttactcatta caggttttga tattttattt
     2581 ttctgggtgg ctagaatgat gtttcaaagc accaatgtct tacatcaact tccttttaaa
     2641 gatatttatt tacatgctct tgtgaaagat gagcaaggta gaaaaatgag taaaagcctt
     2701 ggaaatgtta tcgacccaaa tgaaagcatt aaagaatata gtgctgatat tttacgcttt
     2761 actttagcac ttcttgctat acaaggacgc gatattaaac ttagcaatga taaactttta
     2821 caagttagaa attttacaaa taaaatttat aatgctaaaa attatctgct tttaaatgaa
     2881 agtaaatttg aagatttgga aaatatcaca cttcattcag aattagcaaa atatatttat
     2941 gccaaatttc aaacttgtgt taaggatgta agagaaaatt tagacaatta tcgctttaat
     3001 gatgcggcta atactctata taaattcttt tgggatgatt tttgcgattg gggtatagag
     3061 cttagcaaag ccgaaaaatc aagcgttaaa gaacttggta gtattttcaa agaagcttta
     3121 aaacttttaa atcctttcat gccttttatc agcgagtatt tataccacaa actaagcgat
     3181 acagaactta aaacaagccc ttctattatg ataagcaaat atccaaaatt taaagaacaa
     3241 gataaaaata tagaaaaaat cttttctttg ctcatagaaa gcatagttag tatccgccgt
     3301 gctaaaagtt taatcgatct tggaaattct aaaatagaaa aagcttatat caaatttaac
     3361 gataaaaaaa tcaaagatga aatcaaagct tatatgaatt ttatcataat gctcgcaaag
     3421 tgcgagcaaa tagaatttag tgaagaaaaa ttaccaaagg caatatgtga tgttagcgag
     3481 aatttagaaa tttttattac gcttgaaaat gttgatttaa gtggtatttt aacaagactt
     3541 gaaaatcaaa aaaataagct tgaaaaagaa agtttcaagc ttaactccat gctttcaaat
     3601 gaaaaattca tcgctaacgc acctaaagag gtggtggagc aaaataaaga agctctagaa
     3661 aatttaaaaa ttcaacttga aaaaatatca gttgaacttc aaaatctaag aggttaaaaa
     3721 tttgataaaa ataaaaaatt taaaaaaata ttatggcaag gaactcgtga taaacgatgt
     3781 ttctttggag attaaaaagg gtgaaattta cgccatagta ggtcatagtg gagctggaaa
     3841 atccactctt ttaagatgta ttaatggact tgagaattat caagaaggaa gtttaaaagt
     3901 ctttgatcaa gaaattaaag atttaagtca aaaaaaatca aaagagttaa gaatgcttag
     3961 aaaagatata gggatgattt ttcaaaattt tgccctaatg gagcgcaaaa atgtatttga
     4021 aaatgttgct atgcctttaa gaacacacta tactcagtgt aaatttcatg ccaagctttt
     4081 taataaagaa tacatgagcg aaaaagaaat tgcccaaaaa gtcaattcct tacttgaaat
     4141 cgtagggctt gatcataaaa acaaatccta cccaagagaa ctgagcggag ggcaaaaaca
     4201 acgtgttgct attgctagag ccttagcttt aaacccaaaa attttactta gtgacgaagc
     4261 tacttcggct cttgatccaa acactacaaa aaatatttta gagcttatat ctaaaatcaa
     4321 tgctgaattt gggattactg ttgttttagt aactcacgaa atggatgtgg taaaagacat
     4381 agctcaaaaa gctttattac ttgaacatgg acaaatcata ggaagtggag caattgatga
     4441 gcttttttta aggcctaatg ccaaaatgaa agaattttta ggagaaagcg acttcttgcc
     4501 tgagcacgga cttaatatca aactttactt tccaaaagaa gttgcccaaa atagcgtcat
     4561 cactcatatg gcaagaactc taaatataga ctttaacata gtttggggta aaatagaaaa
     4621 actgaatgga aaagccttgg gaaatttagt tataaatata aatgaaaagg ataaagacaa
     4681 ggttcttgat tacatagaaa aaagtggagt attatgggag gtggcatcat gaatgaagaa
     4741 aacatctcta ttgtcagtgc tttttttagt agaatttctc aattttttaa tgaattttct
     4801 tggcaggata ttaaagaagt gagtttaagt tctatcacga gtttcaatga aaattatgaa
     4861 aacattttaa aacctgcact taatgaaaca atttatatga gtttaatggc tgtactattt
     4921 ggatttttat tggctatcat tcctggaatt ttacttgcta tttgggataa aaatggaatt
     4981 aaagaaaata aaatcgctta tagtatttta gattttatta ccaatatatt acgcgccttt
     5041 ccatttttaa ttcttatagt tgttctttta ccactttcta aaatcatagt aggcacaagc
     5101 ataggtacaa atgctgccat agttccttta gctatcggaa tagctcctta tttggcaaag
     5161 atgcttgaaa gcgcttttaa agaaatagac aaaggaatta tagaagcagc aaaaagttat
     5221 ggtgctagca atattcaaat tatcttcaag gttatcttta gtgaagccct tcctgctata
     5281 attagcggaa ttaccctaac tttgatcttt accattggtt tttctgctct tgctggaact
     5341 gtcggtggtg gaggattagg agatgtagct attcgctatg gttatgaaag atttaacaaa
     5401 gaagttatga ttcaaactgt agttatttta cttatattag ttcaattagt tcaaattcta
     5461 ggtaatttat tttatacttg ggctaaaaat agtaaaacta catatatcat tgccactcta
     5521 ttgattttac ttggagttag tatagttatc aatataaaca atgatgaaaa tttcttttgg
     5581 caagtaattg tttttatctt atttttagga agtttgcttt ataaaggttt caaaaaataa
     5641 ggagattata tctcctttta agataaatat aagttttttt aagtaaaatt taaaaaaaat
     5701 taaaggaatt aaaatgatgt atcagatgcg ttaatctgac tatcaacaag tttttatatg
     5761 cttcttcctg atagtcagag tgaatttatt aagattaaag caagcacaaa atgactaaaa
     5821 aggaaaaaaa tgaaaatcaa atctttattt atagcaagta ttttaacatt aagtcttaat
     5881 gcaaatgcat tagaaaccat cacagttgca gcaactcccg tccctcatgc tgaaatccta
     5941 gaacaagtaa aacctgattt agaaaaacaa ggctataaac ttgaaatcaa agaatttacg
     6001 gattatgttt tgcctaatct agctgttgat aacggagaag ccgatgcaaa ttttttccaa
     6061 catactcctt atttggaaga atttaataaa aacaaaggca ccaaacttat caaagtagct
     6121 gccatacaca tagaacctat ggctgtttac tccaaaaaat acaaaagtct agatgatatt
     6181 aaagaagggg ttaaaatcgc cattccaaat gatccaacca atgaaagtag agctttagat
     6241 attattgcaa aaaaaggttt ggtaaaattt aaagataagg ctttaaaaac acctcttgat
     6301 attatagaca atcctaaaaa aattaaattt gtagaattaa agcccgcaca acttccaaga
     6361 gctttgaatg atgttgattt tgctgtaatt aattccaact acgctctctc tgcaaatcta
     6421 aatcctgcaa aagatagcgt atttatcgaa gataaagaaa gcccgtatgc aaacattctt
     6481 gttgtaagag tgggacatga aaacgatcca aaaatcaaag ccttaatcca agctctacaa
     6541 agtgataaaa tcaaacaatt tatcatagaa aaatacaacg gatctgtttt acctgctttt
     6601 taattttgtc ccttacctag ggactttttt cttaagtaca aaggagtttt tatgaattta
     6661 tttaaaatta ttatactcgc ttgcattcta aatttatcta gcctatttgc acaaaacatt
     6721 actataggag ccactccaaa tccttttggt agcttactag aactaatgaa agatgatttt
     6781 aaaaacaaag ggtatgagct taaaatagta gaattttcag actatatttt gcccaatcgt
     6841 gcattagagg aaaaagaact tgatgcaaat ttatatcaac acaaaccttt tttagaagaa
     6901 tacaacctaa aaaaaggttc aaatttaatt gcaacaacgc ctgtacttat agctccagta
     6961 ggagtttata gtaaaaaaat caaaaattta gaaaatctta aagaaggtgc tagagttgct
     7021 atacctaatg atgcgaccaa tgaaagcaga gctttagagc ttttagagaa agcaaaatta
     7081 atagagctta acaaaaatac tctaaaaacc ccattggaca taaacaaaaa tccaaaaaaa
     7141 cttaaattta tagaacttaa agccgcacaa cttccaagag ctttagatga tgttgatatt
     7201 gctataatta attctaattt cgcacttgga gccggtctga atccaagtaa agatactatt
     7261 tttagggaag ataaaaatag cccttatgta aattatgttg tggtacgctc agaaggtaaa
     7321 aatagcgaaa aaaccaaagt aattgatgaa attttaagaa gcgataaatt taaagccatc
     7381 attaatgaac attataaaga tatattaatc ccagcttttt aggagtatag catgaatatt
     7441 aaaaaaatat ttttaagtgt tttatttaca attagcctta gttttggagc agataaaacc
     7501 ataatcatag gtgcaacacc aacgccttat gctgaaattt taaatttctc caaaccctta
     7561 tttcaagaaa aaggctggaa gttaatagtt aaggaattta atgactataa tatacctaat
     7621 atcgctttaa atgaaaaaga tttagatgca aatttatatc agcataaacc ttttttagat
     7681 gattttaata cccacaaagg aacaaaatta agttctttag gtgctattgt tttagttcct
     7741 atggctatat attctaactc cataaaagat ataaaagaca ttcctaatgg tgctaaaatc
     7801 gctataccta atgatgctac caatgaaagc agagctcttg atttactagc taaagcaaat
     7861 ttaatagagt ttaaaagtca aagcaccctt aaaaccccta ttgacataag taaaaatcca
     7921 aaaaaactta aatttataga gcttaaagcc gcacaacttc caagagccct aaatgatact
     7981 gatttggcta ttattaccac aaactatgct cttggagcag gcttaaaccc tttaaaagat
     8041 ggtattttta tggaagataa agatagttta tatgctattg ttttagctac aagaaaaggt
     8101 gaagaaacaa gtcaaaaaag tcttgttatt aaagaaattt taacaagcga taaaattaaa
     8161 aattttatca tagaaaaata caaaggctct gttatcccta ctttttaact ctatacaaag
     8221 ccttctaaag gctttgttaa acttataaaa gctaaaatac tatttattgc attataattc
     8281 ttaggataaa aatgaaaatt atttttttaa ctttttttat tgtgataaat tatatccaag
     8341 cagctagttt agaagaaatc aaaacagcac tagctaaaga atttagaaat aattttccta
     8401 aaattataat ttctcaaatt gatttaaaaa taacatcatt gcctaaagat tttgatcaat
     8461 atgaatttct aagaatcgct aatgggcgtt ttaatcaagc acaaggcttt ttaagggctg
     8521 aatttaaaac tccgcaaaat atacaaaaaa atgtattttt tagatatttc attcaagcaa
     8581 atttagaagt tttaaaaagc gaacgcgcta taaaaagagg agataaactt ggagcttttg
     8641 actataaaag cgtattgatt gattttgata aagttccttt aaatgcctta accttagatg
     8701 atgtagataa tcttgtagct aaaagcaata ttaacaaaaa cgccatttta agagcaaata
     8761 tgtttaaaac cacagcttta atacgccgaa atgatcctat aatcggggtt ttaagcgaag
     8821 caaatgttga tgttttaatc gaacttgtgg ctttgcaaag tgcaaatatg ggcgaaagga
     8881 ttcgtgcaaa aaacaaagaa ggtaaagtta tgcaaggtat cgtagtgggt aaaaatagga
     8941 tgattataca atgaaagttt tattgggaat ttctggttca agcagtgtca atttaggctt
     9001 aaaattatta aaaaatttag aaaatcaatg cgaactttat tgtattttaa cccaaggtgc
     9061 aaaacttaac ttcaaaactg aaaatcaagc aaatttagaa gaaatttgtc aagaaaattt
     9121 taaatacact cattttttag atgataaaaa tttaagtcta agtgtagcaa gtggatcttt
     9181 tggaatagaa aaaaccatca ttgctccttg ttcaatttca agtttagcaa aaattcacgc
     9241 tggttttgca gacactcttt taatgcgtgc tgcagcagta gccctaaaag aaagaaaaaa
     9301 actcatctta ggggtacgtg aaatgccttt ttctacttta aatttagaac atatgttaaa
     9361 acttagccaa atgggagtta tcatcgcccc tcctattatc gcaagctatt ctaaagcaaa
     9421 caatctagag caaatggaaa attttatcgc aggtaaatgg ttagatcttt tagaaataaa
     9481 acacaattta tatgaaaaat ggcaaaattt ttagtttaaa tttgttatat ttttaaaaaa
     9541 aattggagca aaaatgactt gtttatatcc tgggactttt gatcctatta ccaacgggca
     9601 tttagatgtt ataaaacggg ctttaaaaat ttttgatgaa gtcatcgttg ccatagcaaa
     9661 aagtgaacat aaaaaacctt gctatgattt agaaaaacgc aaagaactag ccctgcttgc
     9721 aacacaaaat ttaaaaaatg ttaaaatcat tgcttttgat aatttgcttg tagatttagc
     9781 caaagaatta aaagttaata ctataatccg tggacttaga gcagtgagtg attttgaata
     9841 cgaattgcaa attggctatg caaatcacgc actttgggaa gatatggaaa ccatttatct
     9901 tatgccaagt ctaaaacatg cttttatttc aagttctatt gttcgctcta tagtagcaca
     9961 tggaggcgat gtaagttctc ttgttccaaa agaaattcta ccttttttaa aggatcaatc
    10021 ttgtatgtag tttttgaagg tattgactgc gtaggaaaaa gtacgcaaat ttcactttta
    10081 aaagaaattt ataaagacgc cattttcaca ctcgaacctg gcggaacaga acttggaaaa
    10141 catttaagag aaattttact taataaaact catcctatta acaaaagagc tgaactcttg
    10201 ctttttttag ctgatcgtgc tcaacatttt gaagaaatct taaaaatcaa tcaaaacaaa
    10261 ctcattatta gcgatagaag ttttatttca ggcatggctt atgccaaaga ttttgaaaac
    10321 gatttgcttt ttgctttaaa tagttttgct ttagaaaatt tttttccaca aaaaattatc
    10381 tttttaaaag gagatgcaaa ccttatccaa gaacgcctca gtcaaaaaga actagatagc
    10441 atagaaaaac gtggcattga gtatttttta agtgtgcaag ataaactcga aaaagtgctt
    10501 cattttttaa aagaaaaaat ttctatagaa attttaacac ttgacgcaaa agaaagtaaa
    10561 gaaaaattac accaacaaat aaaggaattt ttacaatgat taacgcttta aaaggaatga
    10621 aagatttatt agataaagat gcatattgtt atgaaaaagt gattaaaacc tgcgaagaag
    10681 tagctaaaaa ctatggcttt acttttatca atacaccgca tttagaactt tgcacccttt
    10741 ttaaaagaag cgtaggagaa agttctgata tagtaggcaa agaaatgtat gaatttatcg
    10801 ataaaggcga aaatcatgtt tgcatgcgtc ctgaaggaac tgctggggtg gtgcgtgcct
    10861 atatagaaaa aaaactcgat aaaaacacta gtgtgaaaag atggttttat tatggttcta
    10921 tgtttcgtta tgaaagacct caaaagggtc gcttaagaga atttcatcaa tttggagttg
    10981 aaagccttgg catacctaat gtttatgaag atgcaagcat tattttaatg ctagtagaaa
    11041 ttttctcacg ccttggtatt gattttaaac ttcaacttaa ttctttaggc tgctcacaat
    11101 gcttgccaaa ataccgcgat aggctcgttg aattcttaga ttccaaagaa ggtttttgtg
    11161 aagattgttt gcgtagaaaa aatttaaatc ctattcgtgt cttagattgt aaaaatgagc
    11221 attgtcaaaa tttgcttgaa aatgctccgc ttttgatcaa taatttatgc acctcttgcc
    11281 aaaaagactt tgaaacactg caacaaattt taaaggataa tggagttaaa tttgagttag
    11341 attcaaaact tgtgaggggt ttggattatt attctaaaac ggcttttgaa tttataagcg
    11401 atgaaatagg agcaaaggct gctatcgcag gtggaggacg ctacgataga cttatagagt
    11461 atttaggtgg aaaaagtggc tatggtatag gttttgccat gggtatagaa agaattataa
    11521 ctattttaga acaaaaagaa gaaaagattc aaagagaagg aatttatctt tgtgctatgg
    11581 atgaaattta tatccaaaaa cttttgtata tcgctacaaa tttaagaaaa gaatataaag
    11641 tacttttaag ctatgaagca agaaaactag ccaaacatct tgaaaacgcg gataaaaata
    11701 atactgaaat ttttctttgc atgggagaaa atgaagcaca aaatgaaagt ttgttttata
    11761 aaaatttagc aaaaaaagaa gaaaaaatga ttaaaatttc agacttaaag aaggttttat
    11821 gatggattat ggtattgata tttggggaaa tgaaaatttc attatcaaaa atggtaaagt
    11881 ttgtatcaat tacgagaaaa aacctgctat tattgatata gttaaagaat taagagatga
    11941 tggatacaag gggcctttac ttttaagatt tcctcatctt atccaaaaac aaattgaaaa
    12001 tatttacgga aatttcaata aagcaagaaa ggaatttggc tataaaggag gatttaacgc
    12061 tgtttatcct ttaaaggtca atcaataccc tggttttgta aaaaatcttg taaaacttgg
    12121 aaaagactat aactatggac ttgaagcagg ttctaaggca gagcttttac tcgctatggc
    12181 ttataataac gaaggcgcac ctattaccgt aaatggcttt aaagatagag aacttatcaa
    12241 cataggcttt attgcagctg aaatgggaca taatatcact ttaaccatag aaggacttaa
    12301 tgaacttgaa gctatcatag acatagctaa agaacgcttt aaacctaaac caaatatagg
    12361 cttacgtgta cgtttgcatt ctgctggagt tggaatttgg gcaaaaagcg gtgggattaa
    12421 ttctaaattt ggacttacat ccactgaact catagaagcg gtaaatttac tcaaagaaaa
    12481 caaactttta gaacaattta ccatgattca ctttcatcta ggctcacaaa ttaccgaaat
    12541 tcaccccttg aaaaaagcct taaatgaagc aggaaatatc tatacagaac ttagaaaaat
    12601 gggagctaaa aatctaaaag ctattaatct tggtggcggt ttagctgtgg aatactcaca
    12661 atttaaaaat gaaaaaagta gaaattacac cctaagagaa tacgctaacg atgtagtttt
    12721 tatcctaaaa aacatagccg aacaaaaaaa agatttagag cctgatattt tcatagaaag
    12781 tggacgtttt gtagcagcta atcacgctgt tttaatcgct cctgtattag aacttttttc
    12841 tcaagaatac gcagaaaaca aactcatact taaaaaacaa aatccaaaac ttatcgatga
    12901 gctttatgat ctttataaaa gtataaaacc ttccaatgct ttagaatact tgcacgatag
    12961 catagatcat ttagagagta ttttaactct ttttgatttg ggctatgtgg atttacaaga
    13021 tcgttccaat gctgaaattt taactcattt gattacaaaa aaagccatct tgcttttagg
    13081 cgataagcaa aatcctgcgg atttacttgc catacaagat gaagtgcaag aaaggtattt
    13141 ggtaaatttt tcgctctttc aaagcatgcc tgatttttgg ggtttagaac agaatttccc
    13201 catcatgcca cttgatcgct tagatgaaga accgacacga agtgcaagta tttgggatat
    13261 aacctgcgat agcgatggag aaatttcata ctctaaagat aaacctttat ttttgcacga
    13321 tgtagatgta gaaaaagaaa attattttct agggtttttt cttgtaggtg cctatcaaga
    13381 agtacttgga atgaaacaca atctttttac tcatcctact gaagctatta taagcatcaa
    13441 tgaaaaaggc tatgaagtcg aggggattat agaagcgcaa tccatacttg ataccttaga
    13501 agatttagac tatgatatac acgctatcat ggatatactt aatgaacgca taagtaattc
    13561 taagcttgta aatgataagc aaaaaaagca tattttaggc gaactttatc ttttcttaaa
    13621 tgataatggt tatttaaaaa gcataggagt ttagatgaat ttttggggta ttataaaaga
    13681 agatttttct cagccaaagg cacaagatcc agcttttaat tcttgtatag aacttttttt
    13741 taattaccct ggagtatggg ctgtagtaaa ttaccgcttt gcacattttt tttacataag
    13801 aaattttaaa cgcattgcta gaatgattag cggaatttca caattcttaa ctggggtaga
    13861 tttgcaccct ggagcagaac ttggaaggcg tatttttata gatcatgcca atggagtggt
    13921 tataggtcaa acagcaatta tagaagatga tgttttaatt tatcaaggcg ttactttagg
    13981 tggaacaagc cttgaaaaag gtactaaacg ccatccaacc ataaaaaaag gagtgatcat
    14041 aggctcaggc gcaaaagtgc ttggcaatat caccatagga gaaaatgcca aaataggctc
    14101 aaatgctgta gtggttaaag atataggtgc aaatttaact gccgttggaa ttcctgctta
    14161 tattatcgaa gagcgtaaaa ataaaaacat tagagccata gatgcaaatt gcgatgacaa
    14221 actagaaaag ttagaaaaga aaattttaga acttgaaaat cttatattaa aacaacctga
    14281 a
//
LOCUS       DAPIYB010000042        13721 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.043, whole genome shotgun sequence.
ACCESSION   DAPIYB010000042 DAPIYB010000000
VERSION     DAPIYB010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13721
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.043"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..552
                     /locus_tag="RJ318_001013"
     CDS             <1..552
                     /locus_tag="RJ318_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HDV7430896.1"
                     /translation="KEYQNFTLFKLDEKIFHKKHSLFYNFSLPFKNRYKGGILKLILY
                     KDGRYEFQQSALKQNSNDILLLSDDKINSKSDNLYHKSSLRTFYNQHSYKWQQNLCYD
                     IAFFNEKDELCEGSRTNLILEKNAQFYTPQIQSGMLNGVYRNFLVNLGLIKEKVLFKQ
                     DLFEAENIYCINSVRGLKKVKLQ"
     gene            549..1118
                     /locus_tag="RJ318_001014"
     CDS             549..1118
                     /locus_tag="RJ318_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002916151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDV7430897.1"
                     /translation="MKKILFIDNYDSFSYTIIYYLKELGFECKVIKNDAFKKAKELEK
                     FDFTHLIISPGPHSPKESKLSLKAIKYFKKNKKILGICLGHQCIAEVFGGSVSKMQNP
                     MHGKISKLYFKKDPIFKGIKKEIEICQYHSLHISKMPKKCKILAKNSQDIIMAIKHKK
                     YSIYGIQFHPEAILSQQGKKILRNFMKIC"
     gene            1188..1586
                     /locus_tag="RJ318_001015"
     CDS             1188..1586
                     /locus_tag="RJ318_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430898.1"
                     /translation="MKIDNTLKELSQYTKINTDNTQKEKETKDTQKLDSAVEVTISKE
                     AKEKSSKQLQSKNNQNSNESNSQDDNTDKLAELMQKLAEIQAKIAELTGKMANADKNQ
                     LASLQSQVATLIGQSATIQAQIQEIQNQQK"
     gene            1647..2903
                     /gene="murA"
                     /locus_tag="RJ318_001016"
     CDS             1647..2903
                     /gene="murA"
                     /locus_tag="RJ318_001016"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDV7430899.1"
                     /translation="MTFLEIKGVDSLEGEVQISGAKNAALPLIASTILAKNEVKISNV
                     PNVADIKTLISLLENLGARVNFQNNSAFLNTNTLNQTIAKYDIVRKMRASILTLGPLL
                     ARFGHCEVSLPGGCAIGQRPIDLHLLALEKMGANIQIKQGYVVASGNLKGNEILFDKI
                     TVTGSENIIMAAALAEGKTKLLNVAKEPEVVQLCEVLKDAGLEIKGIGTDELEIYGSN
                     GELLEFKEFSVIPDRIEAGTYLCAGAITNSKITLDNVNATHLSAVLAKLHQMGFETLI
                     AEDSITLLPAKEIKPVEIMTSEYPGFPTDMQAQFMALALKANGTSIIDERLFENRFMH
                     VSELLRMGADIKLNGHIATIVGGKELNAADVMATDLRASSALILAALAAKGTSKVHRI
                     YHLDRGYENLEAKFKGLGVKITRLEE"
     gene            2900..4060
                     /locus_tag="RJ318_001017"
     CDS             2900..4060
                     /locus_tag="RJ318_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDV7430900.1"
                     /translation="MKNIFETLKDLENQISCLDESELISLEKAKDRILAKDLYATKNL
                     PSFDNAALDGYAFNYADINEALEIKGTIFAGDKNFYTIAKNECYKIMTGAKMPENADT
                     ILMLEDEYIEENKLIIKKAPKQYNAYRYKGEELKKGEILLQKGTKLNDKHIALLASQG
                     LYKIEVIRKIRIGIFSSGNELKEPWQECDEESIYNANALPLLTMLQNASYLGIIKDNF
                     KSTKEALENTNFDLLITSGGASIGEADFMEKALDELGFTPLFKGLKARPARPTKLYRK
                     GENFVLILPGNPMAAYLSCFIFAKKIIALLSGNLDNPLTFYAKMGMDLKLKNGRNNLI
                     LGNLEKGIFTPFNENKFGSGMLLPLVKSEFLLISEENTSELKKGNEITLLKI"
     gene            complement(4082..4930)
                     /gene="lepB"
                     /locus_tag="RJ318_001018"
     CDS             complement(4082..4930)
                     /gene="lepB"
                     /locus_tag="RJ318_001018"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDV7430901.1"
                     /translation="MEILKKLYKFSQSWTGTVVIVLLVIFFFIQAFVIPSGSMKNTLL
                     VGDFLFVKKFSYGIPTPHIPWLEIPVLPDFNKDGHLIKAQGPQRGDIVVFRNPRNEKE
                     HFVKRCVGTGGDRIVYANKTLYVRMHEGDEFMKEHYPNDLVTLGGQIYVKEPYKQKGI
                     HYDPKKDIESDILRFLSIGDFAMSPAYIKELGNHIGFSGGNAYVFDVPENEYFMMGDN
                     RDYSYDSRFWGSVPYRLIVGKPWFVYFSWDKDKNVRWERIGRFVDTLENDEQYIHDHD
                     DEDKLS"
     gene            complement(4940..5788)
                     /gene="folD"
                     /locus_tag="RJ318_001019"
     CDS             complement(4940..5788)
                     /gene="folD"
                     /locus_tag="RJ318_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDV7430902.1"
                     /translation="MTLLDGKALSAKIKEELKEKNQFLKSKGIESCLAVILVGDDPAS
                     QTYVKSKAKACEECGIKSLVYYLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHI
                     CKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDA
                     VIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDM
                     VKEGVIVVDVGINRLESGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKS
                     AKNRLN"
     gene            5868..6215
                     /locus_tag="RJ318_001020"
     CDS             5868..6215
                     /locus_tag="RJ318_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430903.1"
                     /translation="MKIVLMFFLFSISLFGADFITLKEYSKMLYENPRGISCKECHGA
                     NGSEQILGYYMKNGIKTAYKVPSIQNLSFENFKNSLNQSKDAKSIMPNYSLTNDEIVT
                     LYNYIKQFSKEEK"
     gene            6212..7486
                     /gene="hemL"
                     /locus_tag="RJ318_001021"
     CDS             6212..7486
                     /gene="hemL"
                     /locus_tag="RJ318_001021"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDV7430904.1"
                     /translation="MTNKKAFKEACKFIAGGVNSPVRAFANVQSEPKFISHGKGAYIF
                     DIDGNSYIDYVQSWGPLLFGHCDKDIQKACQKALHKGSSFGAPTLLETELAKLVLSDF
                     PHLEKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFN
                     SPSSLGVLEDVAKHTLVAKYNDINSVKELFEKNKDIACIIIEPIAGNMGLVPAKQDFL
                     EELAKICKNNQTLLIFDEVMSGYRASYLGSYGINHIQADIITFGKVIGGGLPAAAFAS
                     RAEIMDILSPLGGVYQAGTLSGNPLAMAAGIASLTKAKKKTKLYDKLGKLAKKLTQGM
                     KKLADEKGLPLQACHVGSMFGYFFTKDPVSNYQDALKSDLALFSKFHKNMLENGIYLA
                     PSQFETGFICSKMDDKIIDTTLEAVRESFKRI"
     gene            7483..7812
                     /locus_tag="RJ318_001022"
     CDS             7483..7812
                     /locus_tag="RJ318_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HDV7430905.1"
                     /translation="MSNILKEEKNHLENSNSKRQKIIRKTLEAADGLSLGISMVVAVF
                     IGVGIGYLLKKFTPYPWLFWLGVFWGISAAILNVYKAYKVQVKSYEEFKERDELIKEK
                     IQKEKNK"
     gene            7812..8315
                     /locus_tag="RJ318_001023"
     CDS             7812..8315
                     /locus_tag="RJ318_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430906.1"
                     /translation="MEHKKALFCIFAIIHLFFWIIFSSLNHFKLDTFLSYEIAFFSVL
                     LIIFTSYLNYKKVIIKKSKNYEKDFNFISSLFIKKKQNLSKIIHFKVLKDDLKPNIKE
                     KIHFFTMFFTLFKLMAYVILVAGFLFLHRQDKLDIFAYICGISSLLICVFIFILYIKK
                     YESKKNY"
     gene            8293..9480
                     /locus_tag="RJ318_001024"
     CDS             8293..9480
                     /locus_tag="RJ318_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7430907.1"
                     /translation="MSPKKIIKSMTALFAGMAFLFAGNALIVSSIGVILKENGESSLA
                     VGVVSSCFFVGALVGTISAHKIISRIGHIRSFGLFGAIFGISAMLHTVSENLIFWAIL
                     RFFIGICYYGLLMVIESWLNEKSKNAIRSRILGFYEIVFYLAFGIGVLIIALNLSKHS
                     VFILSATLILLSSLPLNLIKIKEPVLPASSPISIPKIFDIAPLAIVTSFIAGMLINGF
                     FSMASLFILLQGFDTKAVSYFIFCGVLGGFIAQTIIGTISDKLGRKFAIITCASIGFI
                     TMLIFIFFKLHLYMQYFLGITLGIGIFCLYALALARANDVLVSKNKGVELGRGVLFCY
                     SLGSLFGPLILGFLMQYFEIKGFIWFYIVSLAFLILFAINKPNILNKKFKKKPGNMVI
                     FDD"
     gene            9473..11632
                     /locus_tag="RJ318_001025"
     CDS             9473..11632
                     /locus_tag="RJ318_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDV7430908.1"
                     /translation="MINTQLASQIANTQKNDLKVDNSASKDKTNLKDNPKEALAQALK
                     QNLGLSKDASSEEILAKFVQNETGTKLKELVNKLLDQINAQKNPDSPVLKQGKNLNLA
                     PNFANELKILSTELAKSDTFTQVLDRLNQILKPASEIKNNNLAPLFKNSGVFLEAKLK
                     DALNEELLPKSFHSLLSTIKGLSSEKLSVQIAQLANTNLSPKDTLKELKNIINSSKNE
                     NKQILNQSSFKALLNLSSKLENFKNYISKNPSHAQEKITPIANKILKELNSIKNDFFK
                     ALNKPENLMIKDPNILKQTATAFEKLENTLKNILGNQASKIQDKENILENLLSNKENI
                     KEEKLNHNTKNQDEEKHIKASKEDENLDSGIKTHEEDTQDTKNDIQNNETENKPDNDI
                     KNSTPNQEKIKDEKQEKSKENIKENPKFYETKTENKTSINTNTNTSNPNTNNTQNLNN
                     TQNIQSNNNQTMQNIFKNQEFIKQNIVKNLAFNVENLDLEQVQDLSKNLSNLSRRLNE
                     SLKELEPYTQNAKLNQAELKNLEHKLNLSIKDLAQIKPKTEQDIAESLHHDVKSTLLQ
                     ISNLAKNEGNEAVYNQANRLLAQIEINQLMSLANDSINTYLPFSWDDLNDSKIMFRRG
                     KKDKFFAQIKLEFAKLGDLEILISLNNEKYIDINIMAENIEFRKTIYENAHELKRNIN
                     KAGLLSANFFVGDIIRSKFDTRNMKNLDLEMGMDKKV"
     gene            11629..11910
                     /locus_tag="RJ318_001026"
     CDS             11629..11910
                     /locus_tag="RJ318_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlhB-like flagellar biosynthesis protein"
                     /protein_id="HDV7430909.1"
                     /translation="MSKIKRSIKKAVALGYQKEKNSAPKVLASGKGESAAKIISLAKE
                     HGVPIKEDEDLIEILSKLDLGDEIPPNMYKAVAEVFAFIYQMANKTPKN"
     gene            complement(11907..12707)
                     /locus_tag="RJ318_001027"
     CDS             complement(11907..12707)
                     /locus_tag="RJ318_001027"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDV7430910.1"
                     /translation="MSFSKESSRLFGFVAGIKFPKMIQKVINENYVKYFNINMSEFKA
                     PCEYESLNALFTRTLQIPRKFEEGFISPSDGKILECGSTFLANEEHFAFSIKGHAYSV
                     EELLKDSFEKDELKNGLDYVNIYLSPKDYHRYHSPCDMQILSATYTSGVLYSVNEKHL
                     ERISNLYVKNERVSLKCQNEKGIFWLVFVGAQNVGKMRFNFDASIQTNAKISHNFTRK
                     YENLNFKKGEELGNFELGSTIVLISQKGLLTFNLKVGQGIKFGEKIAD"
     gene            complement(12704..13615)
                     /locus_tag="RJ318_001028"
     CDS             complement(12704..13615)
                     /locus_tag="RJ318_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDV7430911.1"
                     /translation="MFYAPTYCLFFMTLAWDFVKLILALMGKRDKTYNLILRLIFELS
                     LIVLSVFLIYASINNALKTPEVKSVDVEIPNLKQDLKIAMLTDIHLGKNLHENFLDKL
                     ITKVNLQSPDMVVIVGDLIDTNPKDLKNYISKLNDFNSTYGTFYALGNHEYYHGINEV
                     LDLLRKHTNMKILVNQNLDLGFINIAGLGDLAGLDRGLYAPDLARIKVDLNTSKASIL
                     LTHQPKTALLYDLSDFDLVLSGHTHGGQIFPFMFLVKLQQGFVYGLYDLGEKTKLYVS
                     SGAGFWGPSLRVFAPSEIVILNLKGKK"
BASE COUNT         5188 a         2096 c         1971 g         4466 t
ORIGIN      
        1 aaagaatatc aaaattttac actttttaaa ctcgatgaaa aaatttttca caaaaaacac
       61 tctttatttt ataatttttc cctacccttt aaaaatcgat acaaaggagg aattttaaaa
      121 ctgattttat ataaagacgg aagatacgaa tttcaacaaa gcgccttaaa acaaaattca
      181 aatgatattt tgcttttaag tgatgataaa atcaactcaa aaagtgataa tctctatcac
      241 aaaagctctt tacgtacttt ttataatcaa cactcataca aatggcagca aaacttgtgt
      301 tatgacatag ctttttttaa cgaaaaagat gaactttgcg aaggctcaag aaccaatctc
      361 atcttagaaa aaaacgctca attttatact ccacaaattc aaagtggtat gttaaatgga
      421 gtatatagaa acttcttagt caatcttggt ttgataaaag aaaaagtatt atttaagcaa
      481 gatttatttg aagcagaaaa tatttattgt attaattccg tgcgtggttt aaaaaaggta
      541 aaattacaat gaagaaaatt ttatttatag ataattatga ttcttttagt tataccatca
      601 tctattatct taaagaactt ggttttgaat gcaaagtgat aaaaaatgat gcctttaaaa
      661 aagctaaaga attagaaaaa tttgatttta ctcatcttat catttctcct ggccctcatt
      721 ctcccaagga atctaaatta agcttaaaag caatcaaata ttttaaaaaa aataaaaaaa
      781 ttttaggtat atgtttaggg catcagtgca tagctgaagt tttcggcggt agtgtttcta
      841 aaatgcaaaa tcctatgcat ggtaaaattt ctaaacttta ttttaaaaaa gatcctattt
      901 ttaagggtat taaaaaagaa attgaaattt gccaatatca ttctttacat ataagcaaaa
      961 tgcctaaaaa atgtaaaatt ttagccaaaa attctcaaga cattattatg gcaattaaac
     1021 ataaaaaata tagtatttat ggcatacaat ttcaccctga ggctatttta agtcaacagg
     1081 gtaaaaaaat actacgtaat tttatgaaaa tttgttagtt aatagatgta aataataata
     1141 aaaaaagaga cgatataaaa aatatacaaa gttaaggaga aataaatatg aaaattgata
     1201 atactctaaa agaattaagt caatatacta aaataaatac agataataca caaaaagaaa
     1261 aagaaacaaa agatacacaa aagttagatt cagctgttga agttactatt agcaaagagg
     1321 caaaagaaaa atctagtaag caattgcaat ctaaaaataa tcaaaattcc aatgaatcga
     1381 attctcaaga tgataataca gataagcttg cagaattgat gcaaaagtta gcagaaatac
     1441 aagcaaaaat agcagaactt actggaaaaa tggctaatgc tgataaaaat caacttgcaa
     1501 gtttgcaaag tcaagttgca acattgattg gtcaatctgc aactattcag gcgcaaattc
     1561 aagagattca aaatcaacaa aaataaataa tttttccaaa agtttaagaa tgatataata
     1621 aagcatttta ttttttaagg aaaaatatga cttttttgga aattaaaggt gttgattctt
     1681 tagaaggtga agttcaaatt agcggcgcta aaaatgccgc cctaccctta atcgcttcta
     1741 ctatacttgc taaaaatgaa gtaaagatat ccaatgtccc aaatgtagct gatataaaaa
     1801 ctcttatatc tttgctagaa aatttaggag ctagggtcaa ttttcaaaac aatagtgctt
     1861 ttttaaacac aaacactctt aatcaaacca tagccaaata tgacattgtg cgcaaaatgc
     1921 gtgcttccat acttactcta gggcctttgc ttgctcgttt tgggcattgt gaagtatctt
     1981 tgcctggtgg atgtgctata ggacaaagac ctattgattt acatctttta gccttagaaa
     2041 aaatgggggc aaatatacaa atcaaacaag gctatgtcgt agctagtgga aatttaaaag
     2101 gcaatgaaat tctttttgat aaaatcacgg ttacaggtag tgaaaacatc atcatggcag
     2161 cagctttagc tgaaggtaaa accaagctct taaatgttgc aaaagaacct gaagtagttc
     2221 aactttgcga agttttaaaa gacgcaggac ttgaaatcaa aggcataggc acagatgaac
     2281 ttgaaattta tggcagcaat ggagaacttt tagaatttaa agaatttagc gttatacctg
     2341 atagaattga ggcaggaact tatctttgtg caggggctat tacaaattct aaaattactt
     2401 tagataacgt taacgccact catcttagtg cagttttagc aaaacttcat caaatgggtt
     2461 ttgaaacttt gattgcagaa gatagtatca ccctacttcc tgctaaagaa attaaacctg
     2521 tagaaatcat gacaagcgaa tatccaggct ttccaaccga tatgcaagcg cagtttatgg
     2581 cattagcttt aaaagctaat ggaactagta ttatcgatga aagactattt gaaaatcgtt
     2641 tcatgcatgt aagtgaactt ttaagaatgg gtgcggatat caaactcaac ggtcatattg
     2701 ctactatagt aggcggaaaa gaacttaacg ctgctgatgt catggctaca gatttgcgcg
     2761 cttcctcagc ccttatctta gcagctcttg cagccaaagg cacaagcaaa gtccatagaa
     2821 tttaccatct tgataggggt tatgaaaatt tagaagcaaa atttaaaggt ttaggtgtga
     2881 aaatcacaag gcttgaagaa tgaaaaatat ctttgaaacc ttaaaagact tagaaaatca
     2941 aatttcatgc ttagatgaaa gtgagcttat tagccttgaa aaagcaaagg atagaatttt
     3001 agctaaagat ttatacgcta caaaaaatct acccagtttt gacaatgctg ctcttgatgg
     3061 ctatgctttt aattatgctg atatcaatga ggctttggag attaaaggga ctatttttgc
     3121 aggagataaa aatttttata caattgctaa aaatgaatgc tataaaatca tgacaggggc
     3181 taaaatgccc gaaaatgctg atactatctt aatgttagaa gatgagtata tagaagaaaa
     3241 taaactcatc attaaaaaag cccctaaaca atacaatgcc tatcgctata aaggcgaaga
     3301 attaaaaaaa ggtgaaattt tacttcaaaa aggcactaaa cttaatgata aacatatcgc
     3361 cctacttgct tctcaagggc tttataaaat agaagtcata agaaaaattc gcataggtat
     3421 tttttcaagt ggaaatgagc ttaaagaacc ttggcaagaa tgcgatgaag aaagtattta
     3481 taatgccaat gctttacctt tactaaccat gcttcaaaat gcttcttatt taggtattat
     3541 caaagataat tttaaaagta ctaaagaggc cttagaaaat acaaattttg atcttttaat
     3601 cacttcaggg ggtgcaagca ttggcgaggc tgattttatg gaaaaagctt tagatgaatt
     3661 aggctttact ccgcttttta aaggactaaa agcacgccct gcaagaccta ctaagcttta
     3721 tagaaaaggt gaaaatttcg tattgatttt accaggaaat cctatggcag cttatctttc
     3781 ttgttttatt tttgctaaaa aaattattgc tttattgagt ggaaacttag acaatccttt
     3841 aacattttac gccaaaatgg gtatggattt aaagcttaaa aatggaagaa ataatctcat
     3901 cttaggaaat ttagaaaaag gtatttttac accatttaat gaaaacaaat ttggctctgg
     3961 tatgttactt ccacttgtta aaagtgagtt tttacttata agcgaagaaa atacaagtga
     4021 attaaaaaaa ggtaatgaaa tcacgctttt aaaaatataa tgtttgtgtt tttcacaaac
     4081 attagcttaa tttatcctca tcatcatgat catggatata ttgctcatca ttttccaagg
     4141 tgtcaacaaa acgccctatc ctttcccagc gaacattttt atctttatcc caagagaaat
     4201 atacaaacca aggtttgcct actatcaacc tataaggaac agaaccccaa aaacgactat
     4261 cataagaata atcgcgatta tcacccatca tgaaatactc attttcaggt acatcaaaaa
     4321 cataagcatt tccgccgcta aaacctatat gatttccaag ttctttaata taagctggag
     4381 acatggcaaa atcacctatg ctaagaaagc gtaaaatatc gctttctata tctttttttg
     4441 gatcataatg aatacctttt tgtttataag gttcttttac ataaatttgc cctccaagag
     4501 taacaagatc attcggataa tgttctttca taaattcatc accctcatgc attcttacat
     4561 aaagtgtttt atttgcataa actatcctat ctcctcctgt gcctacacaa cgctttacaa
     4621 agtgttcttt ttcatttcta ggatttctaa aaacaactat atctcctctt tgcggccctt
     4681 gtgcttttat caaatgccca tctttattaa aatccggcaa aacaggaatt tccaaccaag
     4741 gaatatgagg agttgggata ccatagctaa attttttaac aaataaaaaa tcccctacta
     4801 ataaggtgtt tttcatagaa ccagaaggaa taacaaaagc ttgtataaag aaaaaaatca
     4861 ccaaaagaac aataactaca gttccagtcc aagactgtga aaatttatat aatttcttta
     4921 aaatttccat agattttccc taattaagtc tatttttagc agatttaact gtgttttcta
     4981 aaagcatggc tatagtcata ggacctactc cacctggaac aggagttata taactagatt
     5041 ttttagatac ctcttcaaaa tctacatctc caactatctt tccactttca agacgattga
     5101 ttccaacatc aacaacaatc actccttctt ttaccatatc cgatcgaagt aaattcacac
     5161 aacctgctgc tactataatc aaatcagctt gcctagtata aaggctcaaa tctttggttt
     5221 taatatgaca aacgcttact gtagctccag cgtttaaaag catagtagcc ataggacgac
     5281 ctactatatt tgaagcacct ataataacag cgtcttttcc ttctaaatca atttcataag
     5341 ccttcaaaag cttcataact ccaagtggag tacaaggcaa aaacccactt tctaagccta
     5401 aatttaaata tcctacatta ataggatgaa agccatcaac atctttacta cttataatgc
     5461 tttcaagtat taaatcttta caaatatgat caggtaaggg aagttgaacc aaaattccat
     5521 gaacactatc atcgtgattt aaggtattaa tcaatgccaa aagttcattt tgtgtagtat
     5581 tttcattaag ataataaact aaagatttaa ttccacattc ttcacaggct ttagccttag
     5641 attttacata agtttgactt gcaggatcat ctccaaccaa gataacagct aaacagcttt
     5701 caatcccttt gcttttcaaa aattgatttt tttcttttaa ttcttctttg atttttgcgc
     5761 ttaaagcttt accatcaagc aaagtcatta ttttccttct ataaatttaa tcactttttt
     5821 aaagtaaaaa ttgtatcata ttaaaacttc attaacaagg tgaaactttg aaaattgtct
     5881 taatgttttt tttatttagt atcagtcttt ttggtgctga ttttatcact cttaaagaat
     5941 actctaaaat gctttatgaa aatccaaggg gcattagttg taaagaatgt catggagcaa
     6001 atggaagcga acaaatttta ggatattata tgaaaaatgg tattaaaaca gcttataaag
     6061 ttccaagtat acaaaatctt agttttgaaa attttaaaaa ttctcttaat cagagtaaag
     6121 acgcaaaatc aatcatgcca aattactctt taacaaatga tgaaattgta actttatata
     6181 attacatcaa gcaatttagc aaggaagaaa aatgacaaac aaaaaagctt ttaaagaagc
     6241 gtgtaaattc atcgcaggtg gtgtaaattc tccagttcgt gcttttgcaa atgttcaaag
     6301 tgagccaaaa tttatttctc atggaaaagg tgcttatatt ttcgatatag atggaaattc
     6361 ttatatagac tatgttcaaa gctgggggcc tttacttttt ggacattgtg ataaagatat
     6421 acaaaaagct tgtcaaaaag cacttcataa aggttcaagt tttggagctc caactttatt
     6481 agaaactgaa cttgccaagc ttgttttatc tgattttcct catttagaaa agatccgctt
     6541 tgtaagcagt ggaacagaag caaccatgag tgctattcgt cttgcccgtg gttttactaa
     6601 aaaagataaa attttaaaat ttgaaggatg ttatcacggg cattctgatt cattattagt
     6661 gagtgcagga agtggtgctg ctacttttaa ctctcctagt tctttgggtg ttttagaaga
     6721 tgtagctaaa cacactttag tagctaaata taatgatata aatagcgtta aagagctttt
     6781 tgaaaaaaat aaagatattg catgtattat cattgagcct attgctggaa atatggggtt
     6841 agttccagct aaacaagatt ttttagaaga acttgctaag atctgtaaaa acaatcaaac
     6901 tctgctgatt tttgatgaag taatgagtgg atatagagca tcttaccttg gttcctatgg
     6961 aatcaatcat atccaagcag atataattac ttttggtaag gtaataggag gcggtctacc
     7021 tgcagcagca tttgcttcta gagctgaaat tatggatatt ttaagtcctt tgggtggagt
     7081 ttatcaagca ggaactttaa gtggaaatcc tttggcaatg gctgcaggta tagcaagtct
     7141 tacaaaagcc aaaaagaaaa ccaagcttta tgacaaactt ggaaaattag caaaaaaact
     7201 tacacaagga atgaaaaaat tagcagatga aaaaggactt ccgctgcaag cttgtcatgt
     7261 aggttctatg tttggatact ttttcaccaa agatcctgta tcaaactacc aagatgcatt
     7321 aaaatctgat ctagcattat tttcaaaatt tcacaaaaat atgcttgaaa atggaattta
     7381 tttagcacct tctcaatttg aaacaggctt tatatgttca aaaatggatg ataaaattat
     7441 agatacaaca ttagaggctg ttagggaaag ctttaaaaga atatgagcaa tattttaaaa
     7501 gaagaaaaaa atcacttaga aaattccaac agcaaaagac aaaaaatcat tcgcaaaact
     7561 cttgaagctg cggatggttt aagtcttggc atttctatgg ttgttgctgt atttataggt
     7621 gtgggaatag gatatttgct taaaaaattt actccttatc cttggctttt ttggcttgga
     7681 gttttttggg ggatcagtgc tgctatactt aatgtttata aagcttataa agttcaagta
     7741 aaaagctatg aagaatttaa agaaagagat gagttgatca aagaaaaaat tcaaaaagaa
     7801 aagaacaaat aatggaacat aaaaaagctc tattttgtat ttttgccatt attcatttat
     7861 ttttttggat catattttca tcgttaaatc attttaaatt agatacattt ttaagctatg
     7921 aaatagcttt ttttagtgtt ttattgatta tttttacttc ttatttaaat tataaaaaag
     7981 tcattataaa aaaatcaaaa aattatgaaa aagattttaa tttcatttca tcacttttta
     8041 ttaaaaaaaa acaaaattta tcaaaaatta ttcattttaa agttctaaaa gacgatttaa
     8101 agccaaatat taaagagaaa atccattttt ttactatgtt ttttactctc tttaaattga
     8161 tggcttatgt gatattggtt gctggatttt tatttttaca tcgccaagat aaattagata
     8221 tctttgctta tatttgtgga atttcatcct tgctaatttg tgtgtttatt tttattttat
     8281 atataaaaaa gtatgagtcc aaaaaaaatt attaaatcaa tgacagcact ttttgctggt
     8341 atggcatttt tatttgcagg taatgccttg atagtaagct ctataggtgt tatattaaaa
     8401 gaaaacggag aaagttcttt agctgttgga gtagtaagtt cttgtttttt tgtaggcgct
     8461 cttgttggaa ctatcagtgc tcataaaatt atttctcgta taggtcatat acgctctttt
     8521 gggctatttg gtgctatttt tggaatttca gctatgcttc atacagtaag cgaaaatctt
     8581 attttttggg ctattttaag atttttcata ggaatttgct actatggact tttaatggtc
     8641 atagaatcat ggcttaatga aaaaagcaaa aatgccattc gatctagaat tttaggcttt
     8701 tatgaaattg ttttttatct tgcgtttggt attggagttt taatcatagc gttaaatttg
     8761 agcaaacata gtgtatttat tctcagtgca actttaattt tactttcatc tttaccttta
     8821 aatctaatta aaatcaaaga acctgtttta cccgcatcaa gtcctatttc tatacctaaa
     8881 atttttgata tagctccttt agctatcgtc acaagcttta tagctggaat gcttataaat
     8941 ggcttttttt ctatggcatc tttatttata cttttgcaag gttttgatac aaaagcggtt
     9001 tcttatttta tattttgtgg ggttttaggt ggttttattg cacaaaccat cataggaact
     9061 atttcagaca aacttggtcg caaatttgcc attatcactt gtgcaagcat aggatttatc
     9121 actatgctta tatttatctt ttttaaactt catttatata tgcaatattt tttaggaatt
     9181 actcttggta taggaatatt ttgcttatat gctttagcac ttgctagagc aaatgatgtt
     9241 ttagtaagca aaaataaagg tgtagagtta ggtcgtgggg ttcttttttg ttattctttg
     9301 ggctctttgt ttggcccttt aattttaggt tttttaatgc aatattttga aatcaaaggt
     9361 tttatatggt tttatatagt ttctttagca tttttaattc tttttgctat caataaacca
     9421 aatattttaa ataaaaaatt taagaaaaag cctggaaata tggtgatatt tgatgattaa
     9481 tactcaacta gcaagtcaaa ttgccaatac gcaaaaaaat gatttaaaag tagataactc
     9541 tgcttcaaaa gataaaacaa atttaaaaga caatccaaaa gaagcacttg cacaagcttt
     9601 aaagcaaaat ttaggtttaa gcaaggacgc tagtagtgag gaaatactag caaaatttgt
     9661 tcaaaatgaa acaggtacca aattaaaaga acttgttaat aaacttttag atcaaatcaa
     9721 tgctcaaaaa aatcccgatt cccctgtgct taaacaagga aaaaatttaa atttagctcc
     9781 taattttgct aatgaattaa aaatcttaag tacagaactt gcaaaaagtg atacttttac
     9841 acaagtttta gacagattaa atcaaatttt aaaacctgcc agtgaaataa aaaacaataa
     9901 cttagctcct ttgtttaaaa attcaggcgt atttttagaa gctaaattaa aagatgccct
     9961 aaacgaagaa ttactaccca aaagttttca ctctctttta agtacaatca aaggtcttag
    10021 tagcgaaaaa ctaagcgttc agatagccca gcttgcaaat acaaatttaa gcccaaaaga
    10081 cactttaaaa gaattaaaaa atattattaa ttctagcaaa aatgaaaata agcaaatttt
    10141 aaatcaaagt tcttttaaag cacttttaaa tttaagttct aaattggaaa attttaaaaa
    10201 ttatataagt aaaaatccca gtcatgctca agaaaaaatc acccctatag ctaataaaat
    10261 tttaaaagaa ttaaattcca tcaaaaatga ttttttcaaa gctcttaata agccagaaaa
    10321 tttaatgata aaagatccaa acatccttaa gcaaactgct accgcctttg aaaaacttga
    10381 aaatacttta aaaaatatac taggcaatca agcttctaaa atacaagata aagaaaatat
    10441 tttagaaaat cttttaagta acaaagaaaa tatcaaggaa gaaaaactta atcataatac
    10501 aaaaaaccaa gatgaagaaa aacatataaa agcatcaaaa gaagatgaaa atttagattc
    10561 tggtataaaa acccatgaag aagataccca agatacaaaa aatgatattc aaaataatga
    10621 aacagaaaat aagccagaca atgatataaa aaattctact ccaaaccaag aaaaaattaa
    10681 agatgaaaaa caagaaaaat caaaagaaaa tatcaaagaa aatccaaaat tttatgaaac
    10741 aaaaacagaa aacaaaactt caatcaatac aaataccaac acttcaaatc ctaacacaaa
    10801 caatacgcaa aatttaaata atactcaaaa tattcaatct aacaataacc aaactatgca
    10861 aaatattttt aaaaatcagg aatttataaa acaaaatatt gtaaaaaatt tagcatttaa
    10921 tgtagaaaat ttagatctag aacaagtgca agatttaagt aaaaatttaa gcaatctttc
    10981 tcgtagactt aatgaaagct taaaagaact tgaaccctat actcaaaatg ccaagcttaa
    11041 tcaagcagaa cttaaaaatc tcgaacacaa actcaatctt tctatcaaag atctagcgca
    11101 aattaaacca aaaacagaac aagatatagc tgaatcttta catcatgatg taaaatcaac
    11161 acttttgcaa atttcaaatt tagctaaaaa tgaaggcaat gaagctgtat acaatcaagc
    11221 taatcgtctt ttagcgcaaa ttgaaatcaa tcagcttatg tctttagcta atgattctat
    11281 caatacttat ctgccttttt cttgggatga tttaaatgat tctaaaatta tgtttagacg
    11341 cggaaaaaag gacaaatttt ttgctcagat taaactcgaa tttgcaaaac ttggggattt
    11401 agaaattctt atttctttaa ataatgaaaa atatatagat attaatatta tggcagaaaa
    11461 tattgaattt agaaaaacca tctatgaaaa tgcccatgag cttaaaagaa atatcaataa
    11521 agcaggactt ttaagtgcaa atttctttgt aggtgatatc ataagaagta aatttgatac
    11581 tagaaatatg aaaaatttag atcttgaaat gggtatggat aaaaaagtat gagcaaaatc
    11641 aaaagatcga ttaaaaaagc tgtagctcta ggctatcaaa aagaaaaaaa ctctgcacca
    11701 aaagtgcttg caagtggcaa aggagaaagt gctgctaaaa ttatttcttt agccaaggaa
    11761 cacggagttc ctattaaaga agatgaagat ttaatagaaa ttttaagcaa gcttgactta
    11821 ggtgatgaaa ttccacctaa tatgtataaa gctgtagctg aagtttttgc ctttatctat
    11881 caaatggcaa ataaaactcc taaaaactaa tccgctattt tttctccaaa tttaataccc
    11941 tgccctactt ttaaattaaa agttaaaagt cctttttgag agattaaaac tatagtagaa
    12001 cctagctcaa aatttcctag ttcttcgcct tttttgaaat ttaaattttc atattttcta
    12061 gtaaaattat gagaaatttt agcattggtt tgtatgcttg catcaaaatt aaaacgcatt
    12121 tttcctacat tttgcgctcc tacaaaaaca agccaaaaaa tacctttttc attttgacat
    12181 ttcaagctca ctctttcatt ttttacatat aaattactaa tgcgttctaa atgtttttca
    12241 tttacgctat aaagcactcc acttgtgtaa gttgcactta aaatttgcat atcacaaggg
    12301 ctgtgataac gatgataatc ttttggagaa agataaatat tgacataatc aagcccattt
    12361 ttaagttcat ctttttcaaa gctatctttt aaaagctcct caacgctata agcatgtcct
    12421 tttatagaaa aagcaaaatg ttcttcattt gctaaaaaag tacttccaca ctctaaaatt
    12481 ttaccatcac ttggactgat aaaaccttct tcaaattttc ttggaatttg taaagttctt
    12541 gtaaaaagag catttaaact ctcatattca caaggagctt taaattcact catattgata
    12601 ttaaaatact taacataatt ttcattaata actttttgta tcattttagg aaatttaatc
    12661 cccgctacaa aaccaaaaag tctcgaactt tcttttgaaa aactcatttt tttcctttta
    12721 aatttaaaat cactatttca ctcggagcaa aaactctaag acttggcccc caaaatcctg
    12781 ctccactact cacataaagc ttagtttttt ctcctaaatc ataaagccca taaacaaaac
    12841 cttgctgaag tttaactaaa aacataaaag ggaaaatttg ccctccatgt gtatgcccac
    12901 ttaaaacaag atcaaaatca cttaaatcat aaagcaaagc tgttttaggt tgatgtgtga
    12961 gtaaaatact agctttgctt gtatttaaat ccacttttat tcttgctaaa tcaggagcat
    13021 ataaacccct atcaagtccg gctaaatctc caagtccagc aatatttata aaacccaaat
    13081 ctaaattttg attgactaaa attttcatat tagtatgttt tctaagtaaa tccaaaactt
    13141 cattgatacc atgataatac tcatgatttc ccaaagcata aaaagttccg taagtggagt
    13201 taaaatcatt aagttttgag atgtaatttt ttaaatcttt aggattagta tcaatcagat
    13261 cccctactat tacaaccata tcaggacttt gcaaattcac tttagtgatg agcttgtcta
    13321 aaaaattttc atgcaaattt ttacccaaat gtatatcagt aagcatggca atttttaaat
    13381 cttgtttaag atttggtatt tcaacatcaa cactctttac ttcaggtgtt tttagagcat
    13441 tatttatact tgcataaatt aaaaacacac ttaaaactat aagagaaagt tcaaaaatca
    13501 aacgcaaaat aagattatat gttttatctc ttttacccat aagagctaaa atcaatttaa
    13561 caaaatccca agctaaagtc ataaaaaaca aacaataagt cggcgcataa aacatggcta
    13621 aaatttcata ccaagtatca cttaaatatt catctctacg aaatattaaa aacacagctt
    13681 gagctaaaaa aagcacaata aaaataaaga aaaaaatttt a
//
LOCUS       DAPIYB010000043        13684 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.044, whole genome shotgun sequence.
ACCESSION   DAPIYB010000043 DAPIYB010000000
VERSION     DAPIYB010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13684)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13684)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13684
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.044"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..436
                     /locus_tag="RJ318_001029"
     CDS             <1..436
                     /locus_tag="RJ318_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDV7430912.1"
                     /translation="SNLEKEFLNFIEVKKDEINKVFSKWFVIRNEGFEEFKIYDNRKD
                     EVTYAMGFEPDFIFFGKKNKDDDNFLSIQCFIETKGEHLAIAKDAWKEEFLETLKGKI
                     ITTKDDKKLTLQSLPFFINKNFNINDKFLSSFDEFVSFQDER"
     gene            complement(467..1432)
                     /locus_tag="RJ318_001030"
     CDS             complement(467..1432)
                     /locus_tag="RJ318_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDV7430913.1"
                     /translation="MYRKELQILLSKDSIPNFFFLYGADNFQSELYAEFIKEKYKPDE
                     TLKLFFEEYNFTRASDFLSAGSLFSEKKLLEIKTSKKIPTKDLKILVELCKNNTNNFF
                     LLELYDENSKQSDIEKIFSPHFVRFFKANGAKEGVELLSIKAKQLGVEITQNALFTLF
                     ASFDENLYLAASELNKFSGLRVDEKTIEQYCYSLNTGSFESFFEKILKKQDFKSELEK
                     ILDNFNEITLINSLYNSFYRLFKIALYAKVNGKIDFKDLLGYTPPPQVGQNLSSQAFN
                     LKIEQYKEIFTLLLKSEYELKTNSKLVKKEFLISNLLKLARILKS"
     gene            complement(1425..3359)
                     /locus_tag="RJ318_001031"
     CDS             complement(1425..3359)
                     /locus_tag="RJ318_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HDV7430914.1"
                     /translation="MKEFLNSLSYGISSHEVNNEFKQIFRELLTNHIIKEHKNKYYLN
                     NGFAFGVLDISSKGTGFLQCFDESFKKDLLIENKNLKGANYKDIVAVKLLPLKKKRPS
                     AKVILVLKRANETSLVITKRYGEAVLGMNIKTGLSTTLKASQKSLKALPLGTILKIEN
                     ENNNIIEVLGHIDDESIDEKISLALFNKNNEFSDACIKEALANGDSVDASMYENRMDL
                     RALPFCTIDPIHAKDFDDAIYFDTQKREIYVAIADVSEYVYAYSAIDKEARNRGFSIY
                     FPHIAIPMLPHPLSENICSLKPHLDRLAYCFKITLDHENKVIKEELFEGIINSKRRFN
                     YDEVDEILVQKPDLKELSWLYELFEITKNLRKMRLKNAFEFRTEELRMNLDENLSLKS
                     TVFEKDTPSHNLIEDCMLLANKAAAKLIDIGVFRNHLSADTRKIDKLLNELRELGIDV
                     NFKPNLPELIRDIQALADELNLRAEVDKLIIKAQKKAEYSSVNAGHFGLGFDKYSHFT
                     SPIRRYSDLILHRLLKAKQKNDEKLFNYLLLNIESTCENLSTLEREADKVAFDFMDRK
                     FARWAAKNIGKKFKALVVQNDGLCIAKLDDEIKGADIILYDTRVNLLESVEVQIIEAD
                     IVMAKIYAKITQRLIKEENV"
     gene            3478..4500
                     /gene="ilvC"
                     /locus_tag="RJ318_001032"
     CDS             3478..4500
                     /gene="ilvC"
                     /locus_tag="RJ318_001032"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDV7430915.1"
                     /translation="MAITVYYDKDCDLNLIKSKKVAIIGFGSQGHAHAMNLRDNGVNV
                     TIGLREGSVSAVKAKNAGFEVVSVSEASKIADVIMILAPDEIQADIFNVEIKPNLSEG
                     KAIAFAHGFNIHYGQIVVPKGVDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESK
                     NAKNLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLSALIQAGFETLVEA
                     GYEPEMAYFECLHEMKLIVDLIYQGGIADMRYSISNTAEYGDYITGPKIITEETKKAM
                     KGVLKDIQNGVFAKDFILERRAGFARMHAERKNMNDSLIEKTGRNLRAMMPWISAKKL
                     VDKDKN"
     gene            4504..5586
                     /locus_tag="RJ318_001033"
     CDS             4504..5586
                     /locus_tag="RJ318_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HDV7430916.1"
                     /translation="MSKKKLVQIQRYLIIAILFLLCIALALGILVKYQNSQDVSSVKP
                     DYFIDKQEDLISLNKDHYEIGIFQENEFDNNKSVSILEQKIQEIDDLNTSLNEQNLSS
                     VEQNLSLEQNQSLEQNFILKDTNLTQDQNLTFNEDIHLNKISKKPKLAIIIDDMANAS
                     QVRGLKALNLKLNPSFFPPDKNHSETPKLALKFDFYMVHLPLAAINYNKPELDTLNPN
                     DSKERIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKTI
                     GNSKANKIAKELSMPYIQRDVFLDNEDDVNYVKKQLESAVKLAQKKGFVIAIGHPRKN
                     TFKALEQSKDLLKGVDLVYLSEIYGK"
     gene            5576..6349
                     /locus_tag="RJ318_001034"
     CDS             5576..6349
                     /locus_tag="RJ318_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDV7430917.1"
                     /translation="MASEILPDEFLELFKDLKKPPKKLHYKGNLSLLKQDKIAIIGSR
                     RMSVYTKNCVFSLASMLKNAHLCVVSGGALGVDITASMAAMPNTIGIFANGLDQIYPR
                     TNEKIIKQIYENALALSEYEDDYLPKNYDFLLRNRLVIALSKAVVVAQADIKSGSMQS
                     AKLALELNKPLYVLPQRLEESTGTNFLLKENKSKLICDFKEFVSEFASIDINQDEFLE
                     FCKKGVSVDEALKIYGQKVYEYELEGKISIEGLFIRVLA"
     gene            6346..6729
                     /gene="ruvX"
                     /locus_tag="RJ318_001035"
     CDS             6346..6729
                     /gene="ruvX"
                     /locus_tag="RJ318_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDV7430918.1"
                     /translation="MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKN
                     LLKILEISLLIVGIPKGGSSEEEMTRRIKHFVSLLEFDKEICFVDESGTSKEALGYGV
                     ANTRKKDGKLDSLSAFIMIKDYFAL"
     gene            6758..7597
                     /locus_tag="RJ318_001036"
     CDS             6758..7597
                     /locus_tag="RJ318_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HDV7430919.1"
                     /translation="MQNILSSFAQEKNVCVFANTLKTSIEELEKEFLKQNLKFKKINV
                     YCYLFDAKDKAILSSMKAFNEAHFYIQNYSSYLCALNLEVKAGQSVLDMCAAPGGKSI
                     NLANFMQNTGYLACNEMSRDRFFILQKNLKNYGVNAKVFMKDGKNIGNLCPLKFDKIL
                     LDAPCSTFAKIGFDLEKSYKEIKNIAKTQKKLLHSALKALKIGGELVYSTCTFTKEEN
                     EEVIENALKSEFKLELLDIDLENVEAKAGQSEEFAEISKCRRILPSLDYDGFFIAKLR
                     KLC"
     gene            complement(7773..8270)
                     /gene="msrA"
                     /locus_tag="RJ318_001037"
     CDS             complement(7773..8270)
                     /gene="msrA"
                     /locus_tag="RJ318_001037"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDV7430920.1"
                     /translation="MKNIVLGGGCFWCVEAVFERLKGVINTEVGYSGGKPNPSYESVC
                     NGDGNIEVVKINYDEKQISLLEILTLFFKIHDPTSIDKQGGDIGIQYRSIIFYENEED
                     KILAQNFIEEQQKIFSKKIVTKISRLQTYYKAENYHQHYFINNPDQGYCQAVIAPKLQ
                     KIQSD"
     gene            complement(8311..8829)
                     /gene="ppa"
                     /locus_tag="RJ318_001038"
     CDS             complement(8311..8829)
                     /gene="ppa"
                     /locus_tag="RJ318_001038"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDV7430921.1"
                     /translation="MNLSKIKIGDIPNKINAVIEIPYGSNIKYEIDKDSGAIMVDRVM
                     ASAIFYPANYGFIANTLADDGDPVDILVLNEYPIQAGAVIPCRLIGVLIMEDESGMDE
                     KLLAVPNSKIDARYDNIKTYTDLPQATLNKIKNFFETYKILEPNKWVKVQDFKDEKAA
                     IEILEKAIKNYK"
     gene            complement(8839..9417)
                     /locus_tag="RJ318_001039"
     CDS             complement(8839..9417)
                     /locus_tag="RJ318_001039"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDV7430922.1"
                     /translation="MKELFLIIGAPGSGKTTDASLIAQADATNITHYSTGDLLRAEVA
                     SGSELGKTIDSFISKGNLVPLDVVINTIVYALKAAPTKTIIIDGYPRSVEQMMEFDKV
                     LSEQNEICLKGVIEVRVSEEVAKERVLGRNRGADDNEEVFYNRMKVYTEPLNEILDFY
                     QKKKLHFIIDGERTIEPIVADMKELIKKIQSI"
     gene            complement(9414..11165)
                     /gene="aspS"
                     /locus_tag="RJ318_001040"
     CDS             complement(9414..11165)
                     /gene="aspS"
                     /locus_tag="RJ318_001040"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDV7430923.1"
                     /translation="MRSHYNTDLGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGI
                     IQLVCDPNDSKEAHEIASNARNEFVLIAEGTIRPRGEGLINPKLKTGEIEVVVSKLTI
                     ENESAVPPFAIADESVNEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFL
                     EVETPILTKATPEGARDYLVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCF
                     RDEDLRADRQPEFTQIDIEMSFCEQKDVINVAETFLKDIFKACGKEIQTPFRQMQYKD
                     AMENYGSDKPDLRFDLKFIDVIDIFTKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFS
                     KRQMQRFEEFVRKFGAQGLAFIQVKKDGLKGPLCKFFSEEDLNELSKRCELEVGDVVF
                     FGAGAKKTVLDYMGRFRIFLANELKLIDPNALEFLWVVDFPMFEQNDDGSYSAMHHPF
                     TMPKNIDETDLEEISSIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNINEEQQKEK
                     FGFLLDALSFGAPPHGGIAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPA
                     SNEAMRELGIKLRENIK"
     gene            11256..12116
                     /locus_tag="RJ318_001041"
     CDS             11256..12116
                     /locus_tag="RJ318_001041"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HDV7430924.1"
                     /translation="MQNKIDYKNIKKIGLVTRPNVSLDKEILKLQSILSIYKVELVLL
                     KESSEILDLPKYGLDDLFKISDFVISLGGDGTLISLCRKACEYDKAVLGIHAGHLGFL
                     TDFKVDEAENFFQAFFQGEFRIEKPYLLSVFLEDKQGKILEKLAFNDVVISKNNQASM
                     AHIEVFRKEKKFNEYFGDGLIVATPAGSTAYNLSANGPIVYTLAQAFILTPVCSHSLT
                     QRPIVLPKGFEIEIMAKDCILCIDGQENYKMNDFKSIKVGLSDKNVALIHPKNRDYFQ
                     ILKEKLHWGN"
     gene            12116..13639
                     /locus_tag="RJ318_001042"
     CDS             12116..13639
                     /locus_tag="RJ318_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7430925.1"
                     /translation="MINRIFMKENLGFKKAELEISKGLTVFTGLSGAGKSVLFKGILS
                     AFSLSESEAKIVEIELDDKLDLESFGIESEEENVFKLLKEKNTKYFINNQSIAKKSLQ
                     NLSKTFIKYLSAKENNEFGNEKFLNLLDALEMQENTNFVSFLEDFKKDFNAYSQISNE
                     INAILEEEKKVEELKELARAQIEKISSINPKIGEYEELLILKKKLSKKDKLEEAWSKA
                     ERIFELEKVVIEALNLSEVDASFFSECLNELRVICENQKMEDLDFDVEALLDRIENLS
                     YLIKRYESIENALEVLKQKKYELEHYENLSFEKKELEKKFQELKQKLEEKAQILTQTR
                     KKNLKKLEKCLNNYLKDLYMKDASLTLKENEKISILGKDEIMLDINLAHLKNLSSGEL
                     NRLRLAFIATECNILNTGKGILFLDEIDANLSGKEAMSIAKVLEELSKFYQIFAISHL
                     PQLSSKAHNHFLVEKNGEESKVKKLDQEERIKELARMVSGELVSDEAIEFAKTLFKN"
BASE COUNT         4721 a         1891 c         2257 g         4815 t
ORIGIN      
        1 tagtaattta gaaaaagaat ttttaaattt tatagaagtg aaaaaagatg aaatcaataa
       61 agtgttttct aaatggtttg ttataagaaa tgaaggcttt gaagaattta aaatttacga
      121 taatagaaaa gatgaagtaa cttatgctat gggatttgaa cctgatttta ttttctttgg
      181 taagaaaaat aaagatgatg ataatttttt aagcatacaa tgttttatag aaacaaaagg
      241 agagcattta gcaatagcaa aagatgcttg gaaggaagaa ttcttagaga ctttaaaagg
      301 aaaaataata accaccaagg atgataaaaa attaactctt caatctttac cgttttttat
      361 aaacaagaac tttaatataa atgataaatt ccttagtagt tttgatgaat ttgtaagttt
      421 tcaagatgaa agataagtaa tatttatttt taccaagtat ataaatctag cttttcaaaa
      481 tccttgcaag tttaagcaaa tttgaaatca aaaattcttt ttttacgagc ttagaattgg
      541 ttttaagctc gtattcgctt ttaagcaaaa gagtgaaaat ttctttatat tgttcgattt
      601 ttaaattaaa ggcttgagag cttaaatttt gtcccacttg aggaggtgga gtatagccta
      661 aaagatcttt aaagtcaatt ttaccattga ctttagcata aagtgcgatt ttaaacaaac
      721 gataaaaaga attatacaaa gagttgatta aagtaatttc attaaaatta tctaaaattt
      781 tttcaagttc gcttttaaag tcttgttttt ttaaaatttt ctcaaaaaag ctttcaaaac
      841 ttcctgtatt caaactatag cagtattgtt ctatggtttt ttcatctact cttaaaccac
      901 taaatttatt aagctcactc gcagcaagat ataagttttc atcaaaactt gcaaaaagag
      961 taaataaagc attttgagtg atttcaaccc ctagttgttt tgcttttatg cttaaaagtt
     1021 ccacgccttc tttagctccg ttagctttga aaaatcttac aaaatgagga gagaaaattt
     1081 tttctatatc gctttgttta gaattttcat cataaagctc taaaagaaag aaattgttcg
     1141 tattgttttt gcaaagttcg actaaaattt taagatcttt tgttggaatt tttttagaag
     1201 ttttgatttc tagtaatttt ttttcgctaa aaagcgatcc tgcgcttaaa aaatcactcg
     1261 cacgagtgaa gttgtattct tcaaaaaaaa gttttaaagt ttcatcgggc ttatattttt
     1321 cttttataaa ttcagcataa agttcgcttt gaaaattatc tgctccataa agaaagaaaa
     1381 aattaggtat tgaatcttta gaaagtaaga tttgaagctc ttttctatac attttcttcc
     1441 tttataagtc tttgggtgat tttagcataa atttttgcca taactatatc cgcttctatg
     1501 atttgcacct caacactttc tagcaaattt acacgcgtat cataaaggat tatatctgct
     1561 cctttgattt catcatctag tttagctatg caaagtccat cattttgcac aactaaagct
     1621 ttaaattttt tgcctatatt tttagctgcc catctagcaa attttctatc cataaaatca
     1681 aaagcaacct tatccgcctc tctttcaagt gtgctaagat tctcgcaagt gctttctatg
     1741 tttaaaagta gataattaaa aagtttttca tcgttttttt gtttggcttt taaaagtctg
     1801 tgtaaaataa gatcagaata ccttcttata gggcttgtaa aatgtgagta tttatcaaaa
     1861 cctaagccaa aatgccccgc atttacgcta gagtattccg cttttttttg tgctttgatg
     1921 atgagtttat ctacttctgc tcttaaattt aattcatcag ctaaagcttg tatgtcgcgt
     1981 atgagctcag gaagattggg tttaaaattt acatcgatgc ctaattcgcg taattcattt
     2041 aaaagcttat cgatttttct tgtatcagca cttaagtgat ttctaaaaac gcctatatct
     2101 atgagttttg ctgcggcttt attggctaaa agcatacaat cttcgatcaa attatgcgaa
     2161 ggcgtgtctt tttcaaaaac tgtgcttttt agacttaaat tttcatctaa attcattctt
     2221 aattcttcgg tgcgaaattc aaaggcattt ttaagacgca ttttgcgtaa attttttgtg
     2281 atttcaaaaa gctcataaag ccatgaaagt tcttttaaat caggtttttg taccaaaatt
     2341 tcatcaactt catcataatt aaaacggcgt tttgagttga taataccttc aaaaagttct
     2401 tctttgatga ctttattttc atgatcgagt gtgattttaa aacaatacgc taagcgatct
     2461 aaatgaggtt ttaaagaaca gatattttca cttaaaggat gcggtaacat aggtatagca
     2521 atgtgcggaa aataaataga aaatccacga tttcttgctt ctttatctat agcactataa
     2581 gcataaacat attcgctaac atcagcaata gctacataaa tttctcgttt ttgagtgtca
     2641 aaataaatcg catcatcaaa atcttttgca tgtataggat ctatagtgca aaaaggcaag
     2701 gctcttaaat ccatgcgatt ttcatacata ctcgcatcaa cactatcgcc gtttgctagg
     2761 gcttctttga tacaagcgtc gctaaattcg ttgtttttat tgaaaagggc taaagagatt
     2821 ttttcatcta tactttcatc atcaatatgc cctaaaactt ctatgatatt gttattttca
     2881 ttttctattt ttaaaattgt ccctaaaggt agtgctttta aggatttttg agaagctttt
     2941 aaggtggtgc ttaatcctgt tttgatattc attccaagca cggcttcgcc ataccttttg
     3001 gtgatcacta aagaggtttc attggctctt tttagaacca aaatcacctt tgcactgggg
     3061 cgttttttct ttaaaggtag aagttttact gcaactatat ctttatagtt tgcgcctttt
     3121 aggtttttgt tttctatcaa aagatctttt ttgaaacttt catcaaagca ttgtaaaaaa
     3181 cctgtgcctt tactcgaaat atcaagtact ccaaaggcaa aaccattgtt aagatagtat
     3241 ttgtttttgt gttctttaat gatatgattg gttaaaagtt ctctgaaaat ttgtttaaat
     3301 tcattgttta cttcgtgaga gctaatgcca taactaagac tgtttaaaaa ttctttcact
     3361 tttgatactt tatgattttt tgtaaaattc ttacataaag tttataaaaa aaatatgaaa
     3421 tttatacttt aattgctata ataatacctt taatttttga atttttaagg agtgaatatg
     3481 gctattacag tatattatga taaagattgt gatttaaatt taatcaaatc aaaaaaagta
     3541 gcaattatag gctttggctc tcaagggcac gctcatgcga tgaatttaag agataatggc
     3601 gtaaatgtaa ctatcggact tcgtgaaggt agtgtaagtg ctgttaaagc aaaaaatgct
     3661 ggttttgaag tggtgagtgt gagtgaggct tctaagatag cggatgtgat tatgatttta
     3721 gctcctgatg aaattcaagc agatattttt aatgtcgaaa taaaaccaaa tttaagtgaa
     3781 ggcaaggcta tagcttttgc acacggtttt aatatccatt atggtcaaat tgttgttcca
     3841 aaaggtgtag atgttatcat gatagcacct aaagcaccag gtcatacagt aagaaatgaa
     3901 tttactctag gtggtggcac tccttgttta atagctatcc atcaagatga aagcaaaaat
     3961 gctaaaaatt tagccttaag ttatgcaagt gcgatcgggg gtggacgtac aggtattata
     4021 gaaacaacct ttaaagccga aacagaaaca gatctttttg gtgagcaagc tgtgctttgt
     4081 ggtggactta gtgctttgat tcaagcaggt tttgaaactt tggttgaagc aggttatgaa
     4141 cctgaaatgg cttattttga gtgtttgcat gaaatgaaac tcattgtgga tttgatttat
     4201 caaggtggta ttgcagatat gcgttattct atttcaaata ctgcagaata cggcgattac
     4261 atcacagggc caaagattat cactgaagag actaaaaaag cgatgaaagg tgttttaaaa
     4321 gatatacaaa atggtgtttt tgcaaaagat tttatcttag aacgccgtgc aggttttgct
     4381 agaatgcatg cagaacgcaa aaatatgaat gattctttga tagaaaaaac aggacgcaat
     4441 ttgcgtgcta tgatgccttg gatcagtgct aaaaaattag tagataaaga taagaactaa
     4501 acattgtcaa agaaaaaatt agttcaaatt cagcgttatt taatcatagc tatacttttt
     4561 ttactttgca tagctttagc tttgggaatt ttagtaaaat atcaaaattc ccaagatgtt
     4621 tcttctgtta agccggatta ttttattgat aagcaagaag atttaatttc attaaataaa
     4681 gatcattatg aaattggtat ttttcaagag aatgagtttg ataataataa atctgtaagt
     4741 attttagagc aaaaaattca agaaattgat gatttaaata caagtttaaa tgagcaaaat
     4801 ttaagcagtg tggagcagaa tttaagttta gagcaaaatc agagtttaga acaaaatttt
     4861 attctaaaag atacaaattt aacccaagat caaaatttaa cttttaatga agatattcat
     4921 ttaaataaaa tttctaaaaa accaaaactt gccattatta tcgatgatat ggcaaatgca
     4981 agtcaggtta gaggtttaaa agctttaaat ttaaagttaa atccttcttt ttttccgcca
     5041 gataaaaacc atagcgaaac gccaaaactt gctttaaaat ttgattttta tatggtgcat
     5101 ttacctttag cagcaattaa ttacaataaa cccgagcttg atactttaaa tccaaatgat
     5161 agcaaagaaa gaatttttaa aaaaatcaag caaattaaaa aagattttaa ggatttaaga
     5221 tatatcaata atcacacagg aagtttattt acaagcaatg aagaagctat gagaaagctt
     5281 tacgaggctt taaaaaatca aaatatattt tttgtagatt ctaaaactat aggaaattct
     5341 aaggcaaata aaatcgctaa agaactcagt atgccttata tacaaagaga tgtgtttttg
     5401 gataatgaag atgatgttaa ttatgttaaa aaacaacttg aaagtgcggt aaaacttgca
     5461 caaaaaaaag gttttgttat agccatagga catcctagga aaaatacttt taaagcttta
     5521 gagcaaagta aggatttgtt aaaaggcgtt gatcttgtgt atttgagtga aatttatggc
     5581 aagtgaaatt ttgcctgatg aatttttaga actttttaaa gatttaaaaa agcctcctaa
     5641 aaaattacac tataaaggaa atttatcttt attaaaacaa gataaaatcg ctattatagg
     5701 ttcaaggcgt atgagtgttt atacgaaaaa ttgtgttttt tccttagcga gtatgcttaa
     5761 aaatgctcat ctttgcgtgg taagtggcgg tgctttgggt gtggatatca ccgcaagtat
     5821 ggcagctatg ccaaatacta taggtatttt tgccaatggt ttagatcaaa tttatccaag
     5881 aactaatgaa aaaatcatta aacaaattta tgaaaatgct ttagctttaa gtgaatacga
     5941 agatgattat ttgccaaaaa attatgactt tttactaaga aatcgtttgg ttattgcttt
     6001 aagcaaggcc gttgtggttg cacaagcaga tataaaaagt ggttctatgc agagtgcaaa
     6061 acttgcttta gaactcaata aacctttata tgttttacca caaagactag aagaaagcac
     6121 aggaactaat tttcttttaa aggaaaataa atcaaagtta atttgtgatt ttaaagaatt
     6181 tgtaagtgag tttgcaagta tagatataaa tcaagatgag tttttagagt tttgtaaaaa
     6241 aggtgtgagt gttgatgagg ctttaaaaat ttatggacaa aaagtttatg aatatgaact
     6301 tgagggaaaa atttccatag aagggctttt tataagggtt ttagcatgag agctttggct
     6361 ttagatgtag gtttaaaacg cataggtgta gcgctttgca tagataaaaa gatcgctttg
     6421 cctttagatg cagttttaag aaaaaatcgc aatcaagccg ctaatgaaat caaaaattta
     6481 cttaaaatac ttgaaatttc tttactcatt gtaggcattc ctaagggcgg atcaagtgaa
     6541 gaagaaatga caagacgcat taagcatttt gtttctttgc ttgaatttga taaagaaatt
     6601 tgctttgtag atgaaagcgg aacaagcaaa gaagctttag gatacggcgt agccaataca
     6661 cgcaaaaaag atggtaaatt agactcttta tccgctttta tcatgataaa ggattatttt
     6721 gctctctaga atagaaaaac tttataccaa agatgaaatg caaaatattt tatcttcttt
     6781 tgctcaagaa aaaaatgttt gtgtatttgc aaatacttta aaaactagca ttgaagaatt
     6841 agaaaaagaa tttttaaaac aaaatttaaa atttaaaaag atcaatgttt attgttattt
     6901 gtttgatgcc aaagataagg ctatcttaag ttctatgaaa gcttttaatg aggcgcactt
     6961 ttatatacaa aattattctt cttatttgtg tgctttaaat ttagaggtca aagcagggca
     7021 aagtgttctt gatatgtgtg cagctccggg tggcaaaagt atcaatcttg caaattttat
     7081 gcaaaataca ggttatttag cttgcaatga gatgagtagg gatagatttt ttattttgca
     7141 aaaaaatctt aaaaattacg gcgtgaatgc taaagttttt atgaaagatg gtaaaaatat
     7201 aggcaattta tgccctttaa aatttgataa aatcttactt gatgcacctt gttcaacttt
     7261 tgctaaaata ggttttgatt tggaaaaaag ttataaagaa atcaaaaata ttgcaaaaac
     7321 tcaaaaaaaa cttctacatt ctgctttaaa ggcattaaaa ataggcggag agcttgtata
     7381 tagtacttgc acctttacca aggaagaaaa tgaagaagtg atagagaatg ctttaaaaag
     7441 tgagtttaaa ttagagcttt tagatattga tttggaaaat gttgaggcta aagcagggca
     7501 aagtgaagaa tttgctgaaa tttcaaaatg cagacggatt ttaccaagct tagactatga
     7561 tggatttttt atagctaagc ttaggaaatt atgttaattg ataaaattat tcacatttaa
     7621 atacaaattc ataaaaaaac ttaaaaaaca ataaataatt ttttctttat tttaaagctt
     7681 aaagttctat ttttaagtac tttgaaaaga aaatcacagc gtgaaaaggc tgtgaataaa
     7741 gttgaaattt ttttaacctt aaaaagatga aattagtctg attgtatttt ttgcagtttt
     7801 ggagctatta cagcttgaca atatccttga tcgggattat ttataaaata atgttgatga
     7861 tagttttcag ctttatagta agtttgcaat cttgaaattt tagtaactat ttttttgcta
     7921 aatatttttt gctgttcttc gatgaaattt tgagctaaaa ttttatcttc ttcattttcg
     7981 taaaagatta ttgagcgata ttgtatacca atatctccac cttgtttatc tatacttgtt
     8041 ggatcatgaa ttttaaaaaa gagtgttaag atttcaagaa gagagatttg tttttcatcg
     8101 taatttattt tgacaacttc tatgttgcca tcaccattac acacgctttc atagctagga
     8161 tttggttttc ctccgctata tccaacttca gtattgatta caccttttag gcgttcaaat
     8221 acggcttcaa cacaccaaaa acaaccacca cctaaaacga tatttttcat tgcgagtttt
     8281 ccttgagttt agccctttga agggctagga ttatttgtag tttttgattg ctttttctaa
     8341 aatttcaatt gcagcttttt catctttgaa atcttgcact ttaacccatt tatttggttc
     8401 taaaatttta taagtttcaa agaaattttt gattttattt aaagttgctt gtggtaaatc
     8461 tgtgtaagtt tttatattgt catatcttgc atctattttt gaatttggaa ccgcaagaag
     8521 tttttcatcc attccgcttt catcttccat gattaaaaca ccgattaagc ggcaaggaat
     8581 cacggctcca gcttggatag gatattcatt aagcactaaa atatctacag gatcaccatc
     8641 atcagccaaa gtattggcaa taaaaccata gtttgctggg taaaatatcg cactagccat
     8701 aacgcgatct accatgatag caccactatc tttatcgatt tcgtatttga tatttgagcc
     8761 gtatggaatt tcgattacgg cattgatttt atttggaata tctccgattt tgattttgct
     8821 taaattcatt ttttctcctt atatactttg aattttttta atcagttctt tcatgtctgc
     8881 aacgataggt tcgatagtgc gttccccatc gataataaaa tgaagttttt tcttttgata
     8941 aaaatctaaa atttcattta aaggttctgt ataaactttc attctattat aaaacacttc
     9001 ttcattatca tctgcaccac gatttctgcc taaaactctt tctttggcaa cttcttcgct
     9061 tactcttact tctatgacac ctttaagaca aatttcattt tgctcactta aaaccttgtc
     9121 aaattccatc atttgttcta cgcttcttgg atacccatcg atgatgatag ttttagttgg
     9181 agcagctttt agagcataaa ctatagtatt tataacaaca tctaaaggaa caagattgcc
     9241 tttggagata aaactatcta tagtttttcc aagctcactc ccgcttgcta cttcagctct
     9301 taaaagatcc cctgttgaat agtgtgtgat atttgtcgca tctgcttgtg cgattaaact
     9361 agcatcggta gtttttccac tacctggtgc acctatgatt aaaaacaatt ctttcatttt
     9421 atattctccc ttaatttgat tcctaattct ctcattgctt cattgctagc aggcgatggc
     9481 gcatctgtca ttaagcattg cgctctttgg gtttttggaa aggctataac ctctcttatg
     9541 ctgtttgctc ctgtaactag catgatgagt ctatcaagtc ctatagcgat gcctccatgt
     9601 ggtggagcgc caaaacttaa agcatcaagc aagaaaccaa atttttcttt ttgttgttct
     9661 tcattgatat ttaaaagttt aaatactttt tgttgaatat catttttatg gattcttata
     9721 ctacctccac ctagctcaac gccatttaac actacatcat aagcaataga tgaaatttct
     9781 tctaaatcag tctcatcaat attttttggc atggtaaaag gatggtgcat cgcagaataa
     9841 cttccgtcat cattttgctc aaacatagga aaatcaacaa cccataagaa ttccaaggca
     9901 tttggatcta taagttttaa ctcgttggct aagaaaattc taaatcttcc catataatca
     9961 agcacggttt ttttagctcc tgcaccgaaa aataccacat ctcctacttc aagctcacag
    10021 cgtttgctta gctcatttaa atcttcttcg ctaaagaatt tacaaagtgg acctttaagc
    10081 ccatcttttt taacttgtat gaaagctaag ccttgggcgc caaatttacg cacaaattct
    10141 tcaaatcttt gcatttgtct ttttgaaaaa atagtatcgc cttttggaac gcgtatggct
    10201 ttgatgcgat ttttctttgt atctttggca atatttgcaa aaatttcatt atttgactta
    10261 gtgaaaatat caatcacatc aataaattta agatcaaatc ttaaatccgg cttatcagag
    10321 ccataatttt ccatagcgtc tttgtattgc atttgtctaa aaggggtttg aatttctttg
    10381 ccgcaagctt tgaaaatatc ttttaaaaaa gtttcagcta cattgattac atctttttgt
    10441 tcgcaaaaac tcatttcaat atcaatttgt gtgaattcgg gttggcgatc agctcttaaa
    10501 tcttcatctc taaaacattt tgcgatttga aaataacgat caaaaccgct acacattaaa
    10561 agttgtttga aaagctgagg gctttgtgga agagcataaa attcaccctg atgcacacga
    10621 gaaggcacga gataatctct tgcgccttcg ggagtagctt tggtaagaat aggggtttca
    10681 acttctaaaa atcccatatt tgccaaagaa tttctagctg ctatacaagc tttagaacgc
    10741 aaggcaaaat tttcataaag tttaggattt cttaaatcta aaaagcgata ttttaagcgt
    10801 aattcttcat ttacactttc atcagcgata gcaaaaggag gtacggcact ttcattttct
    10861 atggtaagtt tagaaacaac tacttcgatt tctcctgttt ttaatttagg atttataagt
    10921 ccttcgccac gcggacgaat agtgccttct gcaataagta caaattcatt tcttgcattg
    10981 gaagcgattt catgagcttc tttgctatca tttggatcac aaacaagttg gataatacca
    11041 cttctatctc ttaaatctat aaaaataact ccaccatgat cgcggtagct atttacccaa
    11101 ccgcaaagtt taacgctttg accaacatgg gaaattccca agtctgtatt ataatgactt
    11161 cgcaaattta ttccttgaaa aagatttttt aagataatga gcaaaattat agtattttta
    11221 ttcttttgct ttgctaagat ttgatataat tttttatgca aaataaaata gattataaaa
    11281 atattaaaaa aattggactt gttacgcgac ccaatgtgag tttagataag gaaattttaa
    11341 aacttcaatc gattttatct atatataaag ttgaacttgt attgcttaaa gaaagttctg
    11401 aaattttaga tttgccaaag tatggattgg atgatttgtt taaaatatcc gattttgtta
    11461 tttctttagg tggagatgga actttgattt ctttatgccg taaagcttgt gaatatgata
    11521 aagcagtttt aggaattcat gctggacatt taggtttttt aacagatttt aaagttgatg
    11581 aagctgaaaa tttttttcaa gctttttttc aaggagaatt tagaatagaa aagccttatt
    11641 tgttaagtgt ttttttagaa gataagcaag gaaaaatttt agaaaaatta gcttttaacg
    11701 atgtggtcat cagtaaaaac aatcaagctt ctatggctca tatagaagtt tttagaaaag
    11761 aaaagaaatt taatgaatat tttggagatg ggcttattgt tgcaactcct gcgggttcaa
    11821 cagcttataa tttaagtgca aatgggccca tagtttatac tttagctcaa gcttttatct
    11881 taactcctgt ttgttctcat tctttaacac aacgccctat tgtcttacca aaaggttttg
    11941 aaatagagat tatggcaaag gattgtatac tttgcattga tgggcaagaa aattataaaa
    12001 tgaatgattt taaaagtata aaagtgggtt taagtgataa aaatgtggct ttaattcacc
    12061 caaaaaatag ggattatttt caaattttaa aagaaaaatt acactgggga aattgatgat
    12121 aaatagaatt tttatgaaag aaaatcttgg ttttaaaaag gctgaacttg aaatttctaa
    12181 agggcttacc gtttttacgg ggctaagtgg agctggaaaa tcagttttgt ttaaaggaat
    12241 tttatccgca ttttctttga gtgaaagtga ggctaaaatt gtcgaaatag aactagatga
    12301 taagttggat ttagaaagtt ttggtataga aagtgaagag gagaatgttt ttaagctttt
    12361 aaaagaaaaa aacacaaaat attttattaa caatcaaagc atagcgaaaa aaagtttgca
    12421 aaatttaagt aaaactttta ttaagtattt aagcgcaaag gaaaataacg aatttggaaa
    12481 tgaaaaattt ttaaatctct tagatgcctt ggagatgcaa gaaaatacaa attttgtttc
    12541 ctttttagaa gattttaaaa aagattttaa tgcttatagt caaatttcta atgagattaa
    12601 tgcaatttta gaagaagaaa aaaaagtaga agaattaaaa gaactagcta gagcgcaaat
    12661 tgaaaaaatt tcaagcatta atcctaaaat aggtgagtat gaagagcttt taatacttaa
    12721 aaaaaagctt tctaaaaaag ataaattaga agaagcttgg agtaaggcag agcgtatttt
    12781 tgagcttgaa aaagttgtta ttgaagcttt aaatttaagc gaagttgatg cgagtttttt
    12841 tagtgaatgt ttgaatgaat tgcgtgtgat ttgcgaaaat caaaaaatgg aagatttgga
    12901 ttttgatgtg gaggcgcttt tagatcgcat tgaaaattta tcctatctta tcaagcgtta
    12961 tgaaagcata gaaaatgctt tagaagtttt aaaacaaaaa aaatatgagc tagagcatta
    13021 tgaaaattta agttttgaaa aaaaagaact tgaaaaaaaa tttcaagaat taaaacaaaa
    13081 attagaagaa aaagcacaaa ttttaactca aacaagaaag aaaaacctta aaaaattaga
    13141 aaaatgttta aataattatc ttaaagatct ttatatgaaa gatgcaagtt tgacgcttaa
    13201 agaaaatgaa aaaatttcaa ttttaggcaa agatgagata atgctagata ttaatttagc
    13261 tcatttaaaa aatttaagtt cgggtgaatt aaatcgctta agacttgctt ttatagccac
    13321 agaatgtaat attttaaata caggcaaagg gatattattt ttagatgaaa ttgatgcaaa
    13381 tttaagtgga aaagaggcta tgagtatagc taaggtttta gaggaacttt ctaagtttta
    13441 tcaaattttt gctatttctc atttgcctca actttcctct aaggcacata atcatttttt
    13501 agttgaaaaa aatggtgaag aaagtaaggt aaaaaagctt gatcaagaag aaagaattaa
    13561 agaacttgct aggatggtaa gtggagagct tgttagtgat gaagcgatcg aatttgctaa
    13621 gaccttattt aagaattaag cggatttttt attttgctat gttaaaatat ataactataa
    13681 aaat
//
LOCUS       DAPIYB010000044        13671 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.045, whole genome shotgun sequence.
ACCESSION   DAPIYB010000044 DAPIYB010000000
VERSION     DAPIYB010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13671
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.045"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            68..1318
                     /locus_tag="RJ318_001043"
     CDS             68..1318
                     /locus_tag="RJ318_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HDV7430926.1"
                     /translation="MNTPKWTSHDTRWVLSLFGTAIGAGVLLLPISAGLGGLIPLLVI
                     LVLAFPMTYLAHRNLCRFVLSSSNPKDDITFVAESYFGKGGGFLITLLYFFAILPILL
                     VYSANLTTTLLEFLINQFNFNADLTHAARWWVSFLIVGVLVLISILGENVVTKAMSFL
                     VFPFIIFLFIFSLLLIPQWNLSLFANVDFSVISTSNFWVTLWLVIPVMVFSFNHSPII
                     SSLACYCKKEYGGYAEPRARKIISLAIILMVFVVMFFVFSCALTFTPEDFASAKDQNI
                     NILTFIANKFPEVSLLAYVGPIVALVAISKSFLGHYLGSQEGLNGILYKASNGRIQGK
                     FAQTLTAIITFAIAWLVAYKNPSVIGIIEAIGGPVLAILLFLMPLYCIYRFDILARFR
                     NKFLDLFVLVMGIVAISAAIHDLL"
     gene            1333..2697
                     /locus_tag="RJ318_001044"
     CDS             1333..2697
                     /locus_tag="RJ318_001044"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDV7430927.1"
                     /translation="MSNLSIFKIGVGPSSSHTLGPMLAGNLFCKKVAKKLDEIDRVEV
                     TLYGSLSLTGKGHLSDKAVIWGLNGLEAKNLSAAIQDEVNKNAIENAQIDFCGEKKLS
                     FNYEKDLIFSKDFLPLHENGMKIKAYDCKGGLVDEETYYSVGGGFVLTAAELEKKGKN
                     SNQNKKKKLDIELNNAKEALELCDKRDWDLAELSYRYELQFHTKEEICAYCLEIWEVM
                     QEVYYNGTHPNEDYLPGKLHLKRRAKGLKERVAMTADPMGIIDFISLYAIAIAEENAS
                     GAKVVTAPTNGACAVIPAVMLYLKNHTIGFSDEKVIEFLLTAMLIGSFYKKNASISGA
                     EAGCQAEIGSASSMAAAAMATVLGANAFKACNAAEMAMEHHLGLTCDPVAGLVQIPCI
                     ERNAFGAIKAISAARMAMTRKSTPMVSLDEVIETMYETGKDMNYKYKETSLGGLATNL
                     KTVC"
     gene            complement(2705..3226)
                     /locus_tag="RJ318_001045"
     CDS             complement(2705..3226)
                     /locus_tag="RJ318_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430928.1"
                     /translation="MAFMNFSGFFYARNDLRLFKIEKKNELKSFFYKDYTLSSYKDDL
                     NLNNEIFFYQSLKEGLFKENDEILVSNLGKKIILFRNFTQNCDNFNETKLKQILLLFF
                     LLLASVFFASLAMINEFGAIDLLFLTICLLLLVMGVINLGLLFKQIRILKSFSKEEMK
                     EFLSQRMKKYTKV"
     gene            complement(3207..4217)
                     /gene="ribD"
                     /locus_tag="RJ318_001046"
     CDS             complement(3207..4217)
                     /gene="ribD"
                     /locus_tag="RJ318_001046"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDV7430929.1"
                     /translation="MSNFKIQGRQMKEFYMNLALNEAWKYQFLTYPNPAVGCVILDKN
                     EKILAIKAHEKAGLAHAELNAIAHAFKSLRPEISLPKEANALHEFICKNHQGVFKDSI
                     AFVTLEPCSHQGKTPPCAKLFSELGFKKIFISVKDENKIASGGAEFLKKQGIEVEFDI
                     LKEEGKKLLKPFLKWQKGQFKLFKLALSMNGSPFGKIVSNELSRTYAHEIRAVIDLLV
                     VGGETIRKDCPILDARLCKAKAPNLCILSRQNIDNFDKNIPLFKVPNRQIYTQIPSEA
                     KFLMYEGGENFLKIFKDEIDMFLIFQSSSLNDEKNVTIPLNFKPLYRNFLGSDTYGIY
                     EL"
     gene            complement(4422..4509)
                     /locus_tag="RJ318_001047"
     tRNA            complement(4422..4509)
                     /locus_tag="RJ318_001047"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4473..4475),aa:Ser,seq:tga)
     gene            complement(4531..4604)
                     /locus_tag="RJ318_001048"
     tRNA            complement(4531..4604)
                     /locus_tag="RJ318_001048"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4570..4572),aa:Cys,seq:gca)
     gene            complement(4623..4711)
                     /locus_tag="RJ318_001049"
     tRNA            complement(4623..4711)
                     /locus_tag="RJ318_001049"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4675..4677),aa:Leu,seq:taa)
     gene            complement(4721..4795)
                     /locus_tag="RJ318_001050"
     tRNA            complement(4721..4795)
                     /locus_tag="RJ318_001050"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4761..4763),aa:Gly,seq:gcc)
     gene            complement(4867..5619)
                     /locus_tag="RJ318_001051"
     CDS             complement(4867..5619)
                     /locus_tag="RJ318_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430930.1"
                     /translation="MLAFFKGLGVGFLCLLLFVAGVVFNVEFLGKKDSNHDLYFSRNI
                     EVSNTLKPDILYANINFWANENLSSKITLDNSEKAEITNTFNQILERSKKENFCSGGS
                     FSLEPNFSYKDGIQTPKGQRFDANLECEFKENQLADFNKLLNDINSIIAKNNFISVST
                     PAIQTKFSKDTLNNNKENLYKELLKTSYEYEKTYSLDLNKTCVLKNLQVNANTNIAPR
                     MLNAKSDNIELSSPIISKKEQILNAKALFICK"
     gene            5692..6711
                     /gene="mutY"
                     /locus_tag="RJ318_001052"
     CDS             5692..6711
                     /gene="mutY"
                     /locus_tag="RJ318_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDV7430931.1"
                     /translation="MQKKELEKLQENLLLWYEKNGRKTLPWRNLQSQNCDESLKHIDR
                     AYGVYISEIMLQQTQVKSVLERFYFPFLQKFPTLESLANANEDELLKAWQGLGYYTRA
                     RNLKKAALECVDKFGAKLPKDVEDLKKLSGIGAYTAGAIACFGYDQKVSFVDGNIRRV
                     LSRLFALENPSMKELEKRAKELLNLNHAFDHNQALLDIGALVCVGKNAKCRICPLYDF
                     CQGKFHTELYPRAKKILYESLNLNLFLFEFNKKFAIQKSQDKLYKGMYNFPFFKEGEY
                     KLSKDMGFVGEFKHSYTKYKLNIKVYHQILNNENKNYEFKTLKELESTALSALSLKAL
                     KLIKL"
     gene            complement(6697..7956)
                     /locus_tag="RJ318_001053"
     CDS             complement(6697..7956)
                     /locus_tag="RJ318_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7430932.1"
                     /translation="MQELTRTKKIRSIIAASSGNLVEWFDFYIYAFTATYFAHTFSTS
                     DNPVIQQINAFGVFAAGFFMRPIGSWLFGSLADKVGRKKSMVISVVLMALGSFMIAAL
                     PSKDTVGDLAIILLLIARLIQGLSVGGEYGIAATYLSELATEGKRGFYSSFQYVTLIG
                     GQLLAVASISIMFLFFSIDDMKDYAWRILFVIGGILALGSLFVRKMMNESATKLHQHE
                     DRGTLKALCKSWKPFLMVLGVTSGGSLAFYTITTYTKTFMENTGMDKMLVNNLFLGAL
                     FILMIIQPLFGYIGDKIGHKRSLIVFCILALVGIYPIFSLIANNAQNNPSLTFMLVVL
                     LFVILSFYTSVAGIFKAKLFPEHVRALGTGLGYAISNAVFGGSAPWVALQFKNAGIEN
                     GFFIYIAIFTIIMLIATLCLPKKSELN"
     gene            8122..8979
                     /locus_tag="RJ318_001054"
     CDS             8122..8979
                     /locus_tag="RJ318_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/SPASM domain-containing protein"
                     /protein_id="HDV7430933.1"
                     /translation="MKFKKIYIELSDICGLKCDFCPSQKGIRGVMSEEKFQNLAYEIS
                     NKAELFTFHLLGDPLLLPNLENYLKIAKDEAMKLEITTSGFYLNSKNQALLLGYENIH
                     QINISLMSFLSQSKISLEQYFKPILELCKKHLEQKSLSFINLRLWNLDANFKAPKSNL
                     KIYEFLAKEFEAKIDANLSKNRLQRHILLHQNKLFKWPNLKDEPLYKKGKCHALKEQI
                     GILSDGSLVPCCLDTKADINLGNVFENNFDKLFRSPRIKMMKKAFEEDKRIEKLCQTC
                     EFFKARLSD"
     gene            complement(8976..9782)
                     /locus_tag="RJ318_001055"
     CDS             complement(8976..9782)
                     /locus_tag="RJ318_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV7430934.1"
                     /translation="MKKILIIMSLFLIALNAKERLVVLDPASIETLFMLKAEDQIVGI
                     ATLQHSNIYPKDQTSKLTSVGTFSNPSLEKIVALKPSLVILSSYSLNLEEGLKNFGIK
                     SINLKAERLEDITKNITTLGQITKKEKEAELLKQEFNQKFKKLSDKPLNKSAIYLYSS
                     NPLMAFNDNSLIADILRLIGIKNLSPQSQISRPVISAEYILKQNPDILILGINAKNNL
                     LDTNALLKNTKAVKTGSIYFNKDTPILLRLSPKIIDRIQEFKTKLENNNF"
     gene            complement(9779..10555)
                     /locus_tag="RJ318_001056"
     CDS             complement(9779..10555)
                     /locus_tag="RJ318_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7430935.1"
                     /translation="MLKIHNLSFAYHQKDLLKNIHLELKNQAFIGILGPNGSGKSTLL
                     KLILKNLSPNKGVISLFNTNIKDFSLKEFAKICGFVPQKSELNTPLKVIDVLLMSKYP
                     NLKHAFSSYSKEDILEIKEFAKDLRLENFLERSILSLSGGEFQRMLLARALLKKPKIL
                     FLDEPTSALDLNYAIELLNLCEKLVKEKNIAVVAILHDLNLASIFCDKILFLKEGEIK
                     YFGTSKELFTQEILKEIYDLNCEIIYKNSKPYILALKEKK"
     gene            complement(10555..11541)
                     /locus_tag="RJ318_001057"
     CDS             complement(10555..11541)
                     /locus_tag="RJ318_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDV7430936.1"
                     /translation="MLNLNTHSKILVIIGLLVAYIIASFTALCLGDENLNPKELFSYI
                     FSQDEILRQIIIDGRLPRIIMAILIGMLLASSGAITQNVFSNPIADPYIIGIASAATF
                     GAVLAYLLKLNDYYYGILGFVCSAFFALGVFKISSKASIATLLIIGIAASSFLGAFTS
                     FFTYLIGEDSFKIVAWLMGNIGNASWFRVGILILPLIFCLFYFYAHKNELNILLSGDD
                     EARNLGVNAQKLKINLLIVSSLAVSFAVAFSGLIGFVGLIIPHTIRLLLKNYNNALVI
                     PLCTAFGGLFLLICDTLARTLLAPVQIPIGILTAFFGAPIFLYLALSARRFL"
     gene            complement(11516..13645)
                     /locus_tag="RJ318_001058"
     CDS             complement(11516..13645)
                     /locus_tag="RJ318_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDV7430937.1"
                     /translation="MHPNKKAFKLSLFALLLITNLNAQESNKAINLQKVVVSTTGFEQ
                     DADSNLRNVISIEGKDLQNKGYVSLEQALERISSISFVNFGLGRNIDMRGQGNKSNIA
                     VKVMIDGHAINVLDNSHGVTPLDSINLDNVERIEIIPGGGSVLYGSGTRGGVINIITK
                     KQKSDAFAINLKSSAYDHGGLGGNLGINGAKQINENLAFSFDIQSFNLDGYQEGYNEK
                     GYFINTKTYIDINDNSDLTLGYNYFKSKNTSSGYLTKAQAQSDPTQKGKSDNITQINR
                     PEISLDYHYYFDDIWEFNLEAFWQNQKINYLKDVSTMSYMNMSLPVYQNGSGFEDTLT
                     GISLKNKLNYANNSYFIFGYEFANHDAKRKSLVYYSVPSVINYHRMTTLIDMTKQSHS
                     IFALDSHNFNEFFTLSGGARYEFSSYNTDRSYRNEMSMNGRPPSPTIIDSTTLFDTNK
                     NANNFAFEITPNFKYSDTGKLYIKYERGFVSPSPAQFVNKDKNSQKYYSANLNPEIFD
                     TFELGIDDFWWDFYGFNLTLFYTLSKDEISYLGNPHSTSGSWWKYYNIDQTRRLGVEL
                     SLSQNFLDDDLIFRESLTYLDAKISKGVNDGMRIPYVSKIKATAGLEYAWNKNFSNFI
                     DLTYFSRAKDGGTIDENTGKMSKNSWIRDYFLTDIGMKYNYKKLQILAGIRNLFDKRY
                     YTYQDSINDQYLVGNGRNYYVEFKYAF"
BASE COUNT         4599 a         2039 c         2187 g         4846 t
ORIGIN      
        1 aaaaataatt atttataaat attttgctaa aataaaagag atgtaatctt aaatttaagg
       61 aagaataatg aatactccta aatggactag tcacgataca aggtgggttt tatctctttt
      121 tggaacagct attggagccg gcgtactttt gttgcctatt agtgctgggc ttggtggatt
      181 gatacctttg ttagttatac ttgttttagc ttttcctatg acttacttag ctcatagaaa
      241 tttatgtcgc tttgtgcttt caagttctaa tccaaaagat gatattactt ttgttgcaga
      301 aagttatttt ggcaagggcg gtggattttt aattacactt ttgtattttt ttgctatttt
      361 gcctatttta ttggtttata gtgctaatct tacaacaact ttgcttgagt tcttaatcaa
      421 tcagttcaat ttcaatgcag atcttactca tgctgctcgt tggtgggtga gttttttgat
      481 tgttggagtt ttggttttga tttctattct tggtgaaaat gttgtaacaa aagcaatgag
      541 ttttcttgtt tttcctttta ttatattttt atttattttt tcattgcttt taattccaca
      601 atggaattta tcgttatttg caaatgttga tttttccgta atttcaacaa gtaatttttg
      661 ggttacttta tggcttgtta ttcctgtgat ggtatttagt tttaatcact ctcctatcat
      721 ttcttcactt gcttgttatt gtaaaaaaga atatggtggt tatgctgaac ctcgcgctag
      781 aaaaattatt tctttggcaa ttattcttat ggtttttgtt gtaatgtttt ttgttttttc
      841 ttgtgcttta acctttacac cagaagattt tgcatcagca aaagatcaaa atatcaatat
      901 tcttactttt atagcaaata aatttcctga agtttcttta ctagcttatg ttggacctat
      961 tgttgcactt gtggctatta gcaaaagttt cttagggcat tatcttggtt ctcaagaagg
     1021 cttaaatggt attttatata aagcaagtaa tggtagaatt caaggtaaat tcgctcaaac
     1081 tttaacagcg atcattacct ttgctatcgc gtggcttgtt gcgtataaaa atccaagtgt
     1141 tataggaatt atcgaggcta ttggtggtcc tgttttggct attttgcttt tcttaatgcc
     1201 gctttattgt atttatcgtt ttgatatttt ggcaaggttt cgtaataaat ttttagatct
     1261 ttttgttttg gtaatgggga tagttgcaat ttctgctgca attcatgatc ttttataaat
     1321 taaggataaa aaatgagtaa tttaagcatt tttaaaatag gtgttggccc ttcttcttct
     1381 catactttag ggcctatgct tgctggaaat ttattttgta aaaaagttgc taaaaagctt
     1441 gatgaaattg atagagttga ggttactctt tatggttctt tgtcgttaac aggcaaagga
     1501 cacttgagtg ataaggctgt gatttggggg ttaaatggct tagaagctaa aaatttaagt
     1561 gcggcaatac aagatgaagt aaataaaaat gctattgaaa atgctcaaat tgatttttgt
     1621 ggcgagaaaa aacttagttt taattatgaa aaagatttga tattttctaa agatttttta
     1681 cctttacatg agaatggtat gaaaattaaa gcttatgatt gtaaaggtgg gttagttgat
     1741 gaggaaactt attattctgt aggtggaggc tttgttttaa cagctgcgga attagaaaaa
     1801 aaaggtaaaa attctaacca aaataaaaag aaaaaactag atatagagct taataacgct
     1861 aaagaagctt tagagctttg cgataaaaga gattgggatt tggcagagct ttcttatcgt
     1921 tatgaattgc aatttcacac taaagaggaa atttgtgctt attgtcttga aatttgggaa
     1981 gtgatgcaag aagtgtatta taatggtacg cacccgaatg aagattattt gcctggaaaa
     2041 cttcatttaa agcgtagagc taaaggactt aaagaaagag tagcgatgac agctgatcct
     2101 atgggtatta tcgattttat ttctttatat gctattgcga ttgctgaaga aaatgctagc
     2161 ggagcaaaag tcgtaaccgc accaacaaat ggagcatgtg ctgttatccc tgctgttatg
     2221 ctttatctta aaaatcatac tataggtttt agtgatgaaa aggttataga gtttttatta
     2281 acagcaatgc ttataggttc tttttataag aaaaatgcaa gtattagcgg agcagaagca
     2341 ggttgtcaag cagaaattgg tagtgctagt tctatggcag ctgcggctat ggcaacagtt
     2401 ttaggagcta atgcttttaa agcatgtaat gctgctgaaa tggcaatgga acatcatcta
     2461 ggtctaactt gcgatccagt tgcaggactt gtgcaaattc cttgcataga aagaaatgcc
     2521 tttggagcca ttaaggccat aagtgctgct agaatggcaa tgacacgcaa atccactcct
     2581 atggtaagcc ttgatgaggt tatagaaacc atgtatgaaa caggaaaaga tatgaattat
     2641 aaatataaag aaacttcttt aggtggtctt gctacaaatt taaaaacagt atgctaaagt
     2701 gtttttacac tttagtgtat tttttcattc tttgacttaa aaattctttc atttcttctt
     2761 tggaaaaact tttaagaatg cgaatttgct taaaaagcaa gccaagattg attactccca
     2821 tcactaaaag caataagcaa atcgttaaaa aaagaagatc tatggctcca aattcattaa
     2881 tcatagccaa acttgcaaaa aatacactcg ctaataacaa aaaaaataaa agcaatattt
     2941 gttttaattt tgtctcatta aaattatcgc aattttgagt gaaatttcta aaaagtatga
     3001 tctttttacc caaatttgaa actaaaattt catcattttc cttaaataag ccttctttta
     3061 aactttgata aaaaaagatt tcattgttta aatttaaatc atctttgtag cttgataggg
     3121 tgtagtcctt gtaaaaaaag gattttaatt catttttctt ttctatttta aataatctta
     3181 aatcatttct cgcataaaaa aatccactaa agttcataaa tgccataagt atcactccct
     3241 aaaaaattcc tgtaaagtgg cttgaaattt aaaggtattg taacattttt ttcatcattt
     3301 aaacttgaac tttggaaaat caaaaacata tctatttcat ctttaaagat tttgagaaaa
     3361 ttttctccac cctcatacat taaaaattta gcttcacttg gaatttgggt ataaatttgg
     3421 cggtttggaa ctttaaataa agggatattt ttatcaaaat tatctatatt ttgacggctt
     3481 aagatacaaa gattaggcgc ttttgctttg caaagcctag catctaatat agggcaatct
     3541 tttcttatgg tttctccacc gactacaagc aaatcaatca ccgctctaat ttcatgtgca
     3601 taagtgcgac ttagctcatt gcttacgatt ttgccaaaag gtgagccgtt catagaaagg
     3661 gctaatttaa aaagtttaaa ttgccctttt tgccatttta aaaaaggttt taaaagtttt
     3721 tttccttctt ctttaagtat gtcaaattca acctctatac cttgtttttt taaaaattca
     3781 gccccaccgc ttgcgatttt attttcatct ttaacgctga tgaaaatttt tttaaaacct
     3841 agctcgctaa agagttttgc acaaggaggt gtttttcctt gatgagagca aggctcaagc
     3901 gttacaaaag ctatgctatc tttaaataca ccttgatggt ttttgcaaat aaactcatgt
     3961 aaggcgtttg cttctttggg caatgaaatt tcaggtctta agcttttaaa agcatgagct
     4021 atggcattaa gttccgcatg agctaatcca gctttttcat gagcttttat ggctaaaatt
     4081 ttttcatttt tatctaagat tacacagcct acagccggat ttggataggt taaaaactga
     4141 tatttccaag cctcatttaa agctaaattc atataaaatt ctttcatttg cctaccttgt
     4201 attttaaaat ttgacatatt tttaaaattt tatatttttg ttttaagata acaaattcta
     4261 aatttccatt tgtatttctt atttttaatt atattagcca tagtttttct aagttttttt
     4321 aggatataac aaaaatagta agaccgaagt attatttttc atttgtagta tcctttataa
     4381 tttcaggaat aatataagct tgataaacta gaaagtcttg gtggccggga gaaagggatt
     4441 cgaacccctg gaggtgtgac cctcaacggt tttcaagacc gccgctttcg accactcagc
     4501 catctcccga taaagtaaag ttttgccttt tggaggcgac atccggattc gaaccggaga
     4561 tcaaggcttt gcaggcccat gccttaccgc ttggctatgt cgccctgata atgttgaaaa
     4621 agtggtgccc gaggccggac ttgaaccggc acggaagaaa aattccgagg gattttaagt
     4681 cccttgtgtc taccaattcc accacccggg cgggtgatta tggagcggga aacgagattc
     4741 gaactcgcga ccccaacctt ggcaaggttg tgctctaccc ctgagctatt cccgcataaa
     4801 tttctgaaag aattgaagat aaaagtatag caaaataaac ttaaaaggag tttattttgc
     4861 tataagttat ttgcaaataa ataaagcttt tgcatttaaa atttgttctt ttttgctgat
     4921 aattggagat gaaagttcta tattgtcaga tttcgcattt agcattctag gtgcgatatt
     4981 ggtattggca tttacttgta aatttttcaa tacacaagtt ttattaagat ctaaagagta
     5041 agttttttca tattcgtatg atgtttttaa aagctctttg tagagatttt ctttgttgtt
     5101 gtttagtgta tcttttgaaa attttgtttg tatggctggt gttgaaacgc tgatgaaatt
     5161 atttttagct atgatagaat tgatgtcatt taaaagcttg ttaaaatctg caagttggtt
     5221 ttctttaaat tcacattcta aattcgcatc aaatctttga ccttttggag tttgtatacc
     5281 atctttatag gaaaaattag gttctaaaga aaaacttcct ccgctacaaa aattttcttt
     5341 ttttgagcgt tctaaaattt gattgaaagt atttgtgatt tcagcttttt cactattgtc
     5401 taatgtaatt tttgaactta aattttcatt tgcccaaaaa ttaatatttg catataaaat
     5461 atcgggtttt agcgtattgc ttacttctat atttcttgaa aaatataaat catgattaga
     5521 gtcttttttg cctaaaaatt ctacattaaa aactactcct gcaacaaaaa gtaataaaca
     5581 taaaaaacct acacctaaac ctttaaaaaa agctaacatg gatatcctta ataatttaat
     5641 ttgagctaat tttagcaaaa aattttaaaa ttttttgtta tactctcatt tatgcaaaaa
     5701 aaagagcttg aaaaactaca agaaaattta cttctttggt atgaaaaaaa tggacgcaaa
     5761 actttgcctt ggcgtaattt acaaagtcaa aattgtgatg aaagtttaaa gcatattgat
     5821 agagcttatg gggtttatat cagcgaaatt atgcttcagc aaactcaagt taaatcagtt
     5881 ttagaaaggt tttatttccc ctttttgcaa aaatttccta ctttagaaag tttggctaat
     5941 gctaatgaag acgagctttt aaaggcttgg caaggacttg gttattacac tcgtgctaga
     6001 aatttaaaaa aggcagcctt agaatgcgtg gataagtttg gggctaaatt acccaaagat
     6061 gttgaggatc taaaaaaatt aagtggtata ggagcttata cagcaggcgc tatagcttgt
     6121 tttggctacg atcaaaaggt ttcttttgtt gatggcaata tacgccgtgt gctttctcgt
     6181 ctttttgctt tggaaaatcc tagcatgaaa gaacttgaaa aaagagctaa agagctttta
     6241 aatttaaatc atgcctttga tcacaaccaa gctttgcttg atataggggc tttggtttgt
     6301 gtgggtaaaa atgcaaagtg taggatttgt cctttgtatg atttttgtca aggcaaattt
     6361 catacagagc tttatccaag agctaaaaaa atactttatg agagtttaaa tttaaatctt
     6421 tttttgtttg aatttaataa aaaatttgcg atacagaaaa gccaagataa gctttataag
     6481 ggtatgtata attttccttt ttttaaagaa ggagagtata aactttctaa agatatgggt
     6541 tttgtagggg agtttaagca cagctatact aagtataaac ttaatatcaa ggtttatcat
     6601 caaattctaa acaatgaaaa taaaaattat gaatttaaaa ccttaaaaga gttagaaagt
     6661 accgcacttt cggcactttc tttaaaagcg ttaaaattaa ttaagctctg attttttagg
     6721 caaacataaa gtagctataa gcatgatgat tgtaaaaata gctatatata taaaaaagcc
     6781 attttctata cctgcatttt taaattgtaa agcaacccaa ggagcagatc ctccaaaaac
     6841 agcatttgaa atagcataac ctaaacctgt ccctaaagct cttacatgtt caggaaaaag
     6901 ttttgcttta aaaatcccag caactgaagt ataaaaactt aaaataacaa acaataatac
     6961 caccaacata aatgtcaaag aaggattatt ttgtgcgtta ttggctataa gtgaaaaaat
     7021 aggataaatt cctaccaatg ccaaaataca aaatacaatt aaagatcgtt tgtgacctat
     7081 tttatctcct atatatccaa aaagaggttg aatgatcatt agtataaata aagcacctaa
     7141 gaaaagatta ttaacaagca ttttatccat acccgtattt tccataaaag ttttagtata
     7201 agttgtaatg gtgtaaaaag ctaaagaacc tccagaggta accccaagta ccattaaaaa
     7261 aggtttccaa gatttgcata atgcctttaa agtaccacga tcttcatgct ggtgaagttt
     7321 tgtagcactt tcattcatca tttttcttac aaaaagcgag cctagtgcta aaattccgcc
     7381 tattacaaaa agtattctcc aagcataatc tttcatatca tcaatgctaa aaaataaaaa
     7441 cattatacta atgcttgcaa cggccaaaag ttgaccacct attagggtta catactgaaa
     7501 agatgagtaa aaaccgcgtt ttccttccgt agcaagttct gaaagataag tagctgctat
     7561 gccatactcc ccgcctacac taagaccttg aataagtctt gctattaaaa gcaagataat
     7621 agcaagatcg cccactgtat ctttgcttgg taaggctgct atcataaaag agcctaaagc
     7681 cattaaaacc actgatataa ccatagattt tttacgacct actttatcag ctaaagagcc
     7741 aaaaagccaa gagcctatag gacgcataaa aaatcctgct gcaaaaaccc caaaggcatt
     7801 gatttgctgg ataacaggat tatctgaagt tgaaaaagta tgagcaaaat aagttgctgt
     7861 aaaagcatag atataaaaat caaaccactc tactaaattt ccgctacttg cagcaataat
     7921 agagcgaatt tttttcgtgc gagtaagctc ttgcataaac ccttccttaa ttttagattt
     7981 ttatttaagt atagtgtgat ttttgtttaa tatatttaaa aataaagaag agaaataaaa
     8041 aagataaaaa tatcgataaa aatgttacat attttaataa atttcataaa ttttggtaaa
     8101 atgtttactc taggaaatat aatgaaattt aaaaaaatat atatagaatt aagcgatatt
     8161 tgtggtttaa aatgtgattt ttgtccttct caaaaaggaa ttcgcggggt aatgagtgaa
     8221 gaaaaatttc aaaacttagc ttatgaaatt tctaataaag ctgagctttt tacctttcat
     8281 cttttgggtg atcctttgct tttacctaat ttggaaaatt atctaaaaat cgcaaaagat
     8341 gaagctatga aacttgaaat cactacaagt ggcttttatc taaattctaa aaatcaagct
     8401 ttattgttag ggtatgagaa tatccatcaa atcaatattt ctttaatgtc ttttttaagt
     8461 caaagcaaaa tttctttaga acagtatttt aagcctattt tagaactttg caaaaagcat
     8521 ttagagcaaa aaagcctttc ttttatcaat ctaagacttt ggaatttaga tgctaatttt
     8581 aaagcaccta agtcaaattt aaaaatttat gagtttttag ccaaagaatt tgaagctaag
     8641 atcgatgcaa acttaagtaa aaatcgcttg caaagacata ttttgcttca tcaaaataaa
     8701 ctttttaaat ggccaaattt aaaagatgaa cccctttata aaaaaggaaa atgtcatgct
     8761 ttaaaagagc aaattgggat tttaagtgat ggaagtttgg tgccttgctg tttggatact
     8821 aaagcagata ttaacttggg aaatgttttt gaaaataact ttgataagct ttttagatca
     8881 ccgcgtataa agatgatgaa aaaagctttt gaagaagata aacgcataga aaaactttgt
     8941 caaacttgcg aattttttaa agcaagattg agtgattaaa aattgttatt ttctagcttt
     9001 gttttaaatt cttgaattct atctattatc ttaggactaa gacgtaataa tataggtgta
     9061 tctttgttaa aataaatact tcctgtttta actgctttgg tatttttcaa taaagcattt
     9121 gtatctaaaa gattgttttt agcattaatt ccaagaatga gtatgtctgg attttgtttc
     9181 agtatgtatt ctgctgatat aacaggtctt gaaatttgac tttgcgggct taaattttta
     9241 atccctataa gtcttaaaat atcagctatt aaagaattat cattaaaggc cattaaaggg
     9301 ttgctagaat aaagataaat cgcactttta tttaggggtt tatcgcttaa ttttttaaat
     9361 ttttggttaa attcttgttt taaaagctct gcttcttttt cttttttggt gatttggcct
     9421 aaggttgtga tattttttgt tatatcttct aaacgctcgg cttttaaatt gatacttttg
     9481 ataccaaaat ttttaagtcc ttcttctaaa tttaaagaat aagagcttaa aatcaccaaa
     9541 cttggtttta atgctactat tttttcaagc gaaggatttg aaaaagtgcc tacgcttgta
     9601 agttttgagg tttgatcttt aggataaata tttgagtgtt gtaaagtagc aatgcctacg
     9661 atttgatctt cagccttaag cataaaaagg gtttctatgc ttgcaggatc aagcactaca
     9721 aggcgttctt ttgcatttag tgcgattaaa aacaaactca taataattaa aatttttttc
     9781 attttttctc ctttaaagct aaaatataag gtttagaatt tttataaata atctcgcagt
     9841 ttaaatcata aatttctttt aaaatttctt gagtaaaaag ctctttgctc gttccaaaat
     9901 actttatctc cccttctttt aaaaaaagga ttttatcgca gaatatagaa gctaaattta
     9961 aatcatgcaa gatagcaaca acggctatat ttttttcttt aactagtttt tcgcaaaggt
    10021 ttaaaagctc tatagcatag tttaaatcaa gggctgaagt gggttcatct aaaaaaagaa
    10081 tttttggctt tttaagcaaa gctcttgcta aaagcattct ttgaaattca cctccgctta
    10141 aagaaagtat gcttctttct agaaaatttt caagtcttaa atccttagca aattctttaa
    10201 tttctaaaat atcttcttta gaataagaac taaaagcgtg ttttaaattc ggatatttac
    10261 tcattaaaag cacatcgatg acttttaaag gggtgtttaa ttctgatttt tgaggcacaa
    10321 agccacaaat tttggcaaat tctttaagag aaaaatcctt gatatttgtg ttaaaaagac
    10381 ttatcactcc tttatttgga cttaaatttt taagtataag ttttaaaaga gtgcttttgc
    10441 ctgagccatt tggccctaaa attcctataa aagcttggtt tttaagttct aaatgaatat
    10501 tttttagtaa atctttttgg tgataagcaa agcttaaatt atgtattttt agcattataa
    10561 aaatctccta gcgcttaaag ctaagtataa aaaaatagga gctccaaaaa atgcagttaa
    10621 aattccaatc ggaatttgca caggagctaa aagagttctt gctaaagtat cacaaataag
    10681 taaaaataat cctccaaatg ctgtacataa agggataact aaggcattat tataattttt
    10741 aagcaaaagt cttatagtat gaggaatgat gagtccaaca aagcctataa gtccgctaaa
    10801 agcaaccgca aaagatacag ctaaggatga gacaatgagt aaatttatct ttaatttttg
    10861 agcatttacc cctagatttc tagcttcatc atctccgctt aaaagtatgt ttaattcgtt
    10921 tttatgagcg taaaaataaa acaaacaaaa aattaaaggc aagattaaaa ttcccacacg
    10981 aaaccaagaa gcattgccta tatttcccat aagccaagcg actattttaa aagaatcctc
    11041 gcctataaga taagtgaaaa aagaagtaaa agcccctaaa aaagatgaag ctgctatgcc
    11101 gataatgagt aaagttgcta tagaagcttt agaagaaatt ttaaaaactc ctagggcaaa
    11161 aaaggcagag caaacaaaac ctaaaattcc ataataataa tcattcaatt ttaacaaata
    11221 cgccaaaacc gctccaaagg ttgccgcaga agctatacct atgatataag gatcagctat
    11281 aggatttgaa aatacatttt gagtgatagc cccactacta gctaaaagca taccgattaa
    11341 aatcgccatt ataatccgtg gtaagcgtcc atctatgatt atttgtctta aaatttcatc
    11401 ttggctaaag atatatgaaa aaagctcttt tggatttaaa ttctcatctc ctaagcaaag
    11461 tgctgtaaaa gaagcgatta tataagctac caaaagccct ataatcacta aaattttaga
    11521 atgcgtattt aaattcaaca tagtagtttc tgccatttcc aactaggtat tgatcattta
    11581 tactgtcttg ataggtgtag tatcttttat cgaaaagatt gcgaattcct gctaaaattt
    11641 gtagtttttt ataattatat ttcatgccaa tatctgttaa aaaataatcc cttatccaag
    11701 aatttttaga catttttcct gtattttcat ctatagttcc accatctttt gctctagaaa
    11761 aataggttaa atcaataaaa tttgagaaat ttttattcca agcgtattca agcccagctg
    11821 tggctttgat ttttgaaaca taaggaattc tcatgccgtc attaacacct ttagaaattt
    11881 tagcatcaag ataagttaga ctttctctaa agattaaatc atcatctaaa aaattttgac
    11941 tcaggcttaa ttctactcct aaacggcgag tttgatctat attataatat ttccaccaag
    12001 atccactagt agaatgaggg tttccaagat aagaaatttc atctttgctt agggtgtaaa
    12061 ataaagttag attaaagccg taaaaatccc accaaaaatc atcaatacct agttcaaagg
    12121 tatcaaagat ctcaggattt aaatttgcag aataatactt ttgtgaattt ttatccttgt
    12181 tgacaaattg tgctggactt ggagagacaa aacctctttc gtatttgata taaagctttc
    12241 ctgtgtctga gtatttaaaa tttggagtga tttcaaaagc aaaattattg gcgtttttat
    12301 tggtatcaaa aagtgttgtt gagtctatga tagtaggtga tgggggtctt ccgttcatac
    12361 tcatttcatt tctataagat ctatcggtat tataagagct aaattcatat ctagctccac
    12421 cggataaagt aaaaaattca ttaaaattat gagaatcaag agcaaaaata gaatggcttt
    12481 gtttagtcat atctattaaa gttgtcatcc tgtgataatt tatgacactt ggaacgctat
    12541 aatacaccaa actctttctt tttgcatcat ggtttgcaaa ttcataacca aaaataaaat
    12601 aagaattatt tgcataattt agtttgtttt ttaaacttat ccctgtaagc gtgtcttcaa
    12661 aaccacttcc attttgatat acaggaagac tcatattcat gtagctcatt gtagaaacat
    12721 cttttagata attgatcttt tgattttgcc aaaaagcttc taggttaaat tcccatatat
    12781 catcaaaata gtaatgataa tccaaagaaa tttcagggcg attgatttgt gtgatattat
    12841 cactcttacc tttttgggtt ggatcgcttt gagcttgtgc ttttgttaga tagccactgc
    12901 tggtattttt gcttttaaaa taattataac ccaaagttaa atcgctatta tcattgatat
    12961 caatataggt ttttgtgttg ataaaataac ctttttcatt ataaccttct tgatatccat
    13021 caaggttaaa actttgtata tcaaagctaa aagctaaatt ttcatttatt tgtttggcac
    13081 cattgatacc taaatttcca cctagtccac catgatcata agcactgctt tttaaattta
    13141 tagcaaaagc atctgatttt tgtttttttg taatgatatt aatcacgcca cctctagtac
    13201 cacttccata aagcacagat ccacccccag gtatgatttc tatgcgttct acattatcta
    13261 aattgatact atctagtggg gttacaccat gggaattatc aagaacatta atagcatgcc
    13321 catcaatcat aacttttaca gctatattgg atttatttcc ttgtccacgc atatctatat
    13381 tgcgtccaag tccaaaattt acaaaactaa tgctcgaaat tctttctaag gcttgttcta
    13441 aagaaacata acctttattt tgtagatctt tgccttctat gctgattaca ttgcgtaaat
    13501 ttgaatccgc atcttgttca aaacctgttg tactaacaac aactttttgt agattgatag
    13561 ctttatttga ttcttgtgca tttaaattag ttattagcaa taatgcaaat aaagataatt
    13621 taaaagcttt tttatttggg tgcaaatttt actccttaaa taaaataaat a
//
LOCUS       DAPIYB010000045        13459 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.046, whole genome shotgun sequence.
ACCESSION   DAPIYB010000045 DAPIYB010000000
VERSION     DAPIYB010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13459
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.046"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..2093)
                     /gene="copA"
                     /locus_tag="RJ318_001059"
     CDS             complement(<1..2093)
                     /gene="copA"
                     /locus_tag="RJ318_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase CopA"
                     /protein_id="HDV7430938.1"
                     /translation="MEELRIKIGKMTCVNCSNAIERACKKIDGVKDASVSYVNSSGVF
                     LLEDQKKRKDIIAKIKNLGFEILEDEQSLNAYKAKKHLELRKNLLLSIVLSVIIMYFE
                     MFVKSSFSQNIQMALSFFGIFYCGRDFFSHAFLGFKSKNLDMNTLVALGTLSAFVYSF
                     LVYLQIFKEEDLYFSGAMMIISFVLLGKYLESKAKFKAQDYQRILENIDTKKTKILLE
                     DESIKEISSSFVKSGDVLLVKEGESIVADGVVLLGSAELDMSFLNGEFLPVLKKEGDE
                     VQAGAVVLNGALRIKANKKAMDSTLEQIKNLVFEAGSIKSPLANLADQISKYFVGGII
                     FFAFLVFVFWVLKADLNTAFLHSCAVLLISCPCALGLATPIALVVASANAAKNFILIK
                     NPAALEKLALVKYAFFDKTGTLTKENLSIFKHNLSKDDFDKLCQIESLSSHPIAKALH
                     KDQICDLKGEGRVIVGSGIKYKEDNDNYLVGNAQFLHENEIDTKESDIFFDTFKEYVR
                     VYFAKNKKCLGGVLLSNALKDGTKELVLNLKKQNLKTFILSGDHVKNVEKIAKELQID
                     EFYAQLKSEEKLQIIQKFKKTLFVGDGINDAAALSAASVSMSFSKANELAKKTGDFIL
                     IKDDLSAIFKCFKLAKKTRSIIKLNLFWAFIYNVLCIPIAAGFVPFITLSPHIAALAM
                     CFSSITVVLNSLRLK"
     gene            complement(2093..2287)
                     /locus_tag="RJ318_001060"
     CDS             complement(2093..2287)
                     /locus_tag="RJ318_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal transport/detoxification protein"
                     /protein_id="HDV7430939.1"
                     /translation="MKFKVKNVNCMNCVNLIKNSLEDEFGNIEVDLEQKILSLNLEEN
                     QVSNFTKEFQDLGFEIVERL"
     gene            complement(2277..3227)
                     /gene="czcD"
                     /locus_tag="RJ318_001061"
     CDS             complement(2277..3227)
                     /gene="czcD"
                     /locus_tag="RJ318_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter CzcD"
                     /protein_id="HDV7430940.1"
                     /translation="MYKFLSHEPLANKSCHHNHEEHSHEHHHSHADARSVDKKILKIS
                     LLMTFSMMLVQFIYSILSNSLALLSDTLHMFSDVFALALSFLAIIAVEKWQDHQKTFG
                     YFRLEVLVAFINALTIILSALFIIYEAIEKFINPKEIDAKTMIIVAILGFLVNGINAL
                     MMFKGANLENVNMKSAFLHMMSDLLGSLAVIIGGIVVYFSDIVYIDTILAIVLSILLL
                     RWAIILLKQSANVLLESSPVDIEKVRQVLLLNPSVDEVVDLHITQITNKMLVASMHLK
                     VRVCNLKEFEKLSQDLSHKLLHEFEIGHITIQPIRSENEI"
     gene            complement(3303..3566)
                     /locus_tag="RJ318_001062"
     CDS             complement(3303..3566)
                     /locus_tag="RJ318_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HDV7430941.1"
                     /translation="MLCPVCNVDLVMSDRSGVEIDYCPKCRGVWLDRGELDKIIERSV
                     PNTANFNQAPRQESRYNDSAYHQHNDYYKKKKKESWLGELFDF"
     gene            complement(3636..4130)
                     /locus_tag="RJ318_001063"
     CDS             complement(3636..4130)
                     /locus_tag="RJ318_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HDV7430942.1"
                     /translation="MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSALLAAIAHGLR
                     FTLVEYFHFQTLAIATFVASFCIGCLGIVLAKIIKTPAEIIAFPALIPMIPGIYAYKA
                     ILYLISFIRSDDLKAKSEFLVQFFDYFFTTVSVTLALAIGVSVTLLIFFEQSFMMTRH
                     AKKH"
     gene            complement(4127..4903)
                     /locus_tag="RJ318_001064"
     CDS             complement(4127..4903)
                     /locus_tag="RJ318_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HDV7430943.1"
                     /translation="MEKPDIQRLTNFLIIYTKTLLGAGTYTARVAKCVGRIAEVYGYE
                     ININFFFHHITLNVVDMDDNSIQRTYVIPNHHAHVNFKLIFDLSALSWAIYDHKYDLE
                     KAKVVFGQISQQKKHSYLLNLLFVSMANSAFCRLFGGDFGAGNLVFFATFVGLLLRYI
                     LTKAKIDLRIQYILCSFISSWFVFFGLDMGYTNTSDVALGSSILYLIPGVFFINSVID
                     ILKDHILMGLSRIISVAILICCIALGIYMTLSISDFGILR"
     gene            4970..5896
                     /locus_tag="RJ318_001065"
     CDS             4970..5896
                     /locus_tag="RJ318_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HDV7430944.1"
                     /translation="MAKIGIVGLGYVGAASAYSIVIQGICSELYLYDIKQDLALAHAR
                     DLEDMSAIHFSYTKIFHVPNLENLASCDIIILAFRKESLKELPSRLVELKNNILELKD
                     IVLTLKNANFKGKYIVATNPNDTITYYTQVLSQLPKNHVFGSGTNLDSSRLKKLLAKD
                     LNINSKDIFACMIGEHGDSQFAALSNASVLGQNLLDFYKQKLSKDLDIQELEKAVISE
                     GYFIYERKGRTEFGIGTSCANLAKAILEDRKSLHPVSVVFDDIAFSMPAIIGKDGIEK
                     VFELKFNEKEKIKLENSKQQIKNAIQSVKDKI"
     gene            complement(5893..6495)
                     /locus_tag="RJ318_001066"
     CDS             complement(5893..6495)
                     /locus_tag="RJ318_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV7430945.1"
                     /translation="MQEIISFIVETASAWGYLGIIILMTLESCFIPFPSEVVMIPAGY
                     LAHKGELDITLCILSGTLGSVLGALINYYICFFWGKNFVLKWGKYFGINEVKFAKFEE
                     FFNKHGEFSTFTCRLLPGIRQYISMPAGLVKMKLVNFILFTALGSAIWVAILVFLGYY
                     IGQNEELIKTYLTQILIIIIVFVILASLIYIKIKKPFKKA"
     gene            complement(6576..6803)
                     /locus_tag="RJ318_001067"
     CDS             complement(6576..6803)
                     /locus_tag="RJ318_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430946.1"
                     /translation="MRKILFASLLPIIALADCASLMAKYEAPEPESKTMKQVERWINK
                     KVSDPADAAVLKECMIARAADNPNQVSVAGK"
     gene            complement(6814..8232)
                     /locus_tag="RJ318_001068"
     CDS             complement(6814..8232)
                     /locus_tag="RJ318_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3373 family protein"
                     /protein_id="HDV7430947.1"
                     /translation="MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAQI
                     RKEREAQAKQNEAVKAELADLNDRADETEFQAALSKVKFGLEFSTAVSNTNYKVDGQD
                     YSANNKWMNELHLNMNADINDKTKFYGRLSMAKNWSQMGWSGSPLDLDAGRNTRTSGP
                     VLYVDRAYLDYYITPEWIATVGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVI
                     TYKPESLQDHKVAIRAAYGKTYQWDEEGKVRDWMSDQKDADANLYYAAVEGELPIEGM
                     GDNLLLLNVAYISDFSLPIDGGTIINNLIGGAGVKNLGDATIANIHFENYKAFGTNFN
                     WFASLGYYNGSNANAFWIPTASSFANNLKFNEEDGYAVHVGGRYDFTKALKVGYEFFW
                     GSRYWYTMSRPSINDPLNIRMTRGTAHDVYVIYQLDRYQFLRLSYTNIQNKWGNRGIP
                     LMGAKKEKSRADNIMLMYNVKF"
     gene            complement(8388..8870)
                     /locus_tag="RJ318_001069"
     CDS             complement(8388..8870)
                     /locus_tag="RJ318_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDV7430948.1"
                     /translation="MIKTIDTSKVNEYKFALIETEKGTMKLKLFGDEAPQTVCNFATL
                     ANEGFYKDLNFHRVIPNFVIQGGCPHGNGVGGPGYEIICECDDQEHKHERGTLSMAHA
                     GRDTGGSQFFICHSPQAHLDGVHTVFGQIDPKDEESLEVLDSIRQGDKILDIKICDKI
                     "
     gene            complement(8880..9587)
                     /locus_tag="RJ318_001070"
     CDS             complement(8880..9587)
                     /locus_tag="RJ318_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDV7430949.1"
                     /translation="MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMN
                     PKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDN
                     PTRTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGLEE
                     LEQNEEELVISGDYTAFGELSSAIETKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLL
                     DKLEDDDDVQAVYTNID"
     gene            9696..10037
                     /locus_tag="RJ318_001071"
     CDS             9696..10037
                     /locus_tag="RJ318_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDV7430950.1"
                     /translation="MNIAKKELFVAWFFLIAAIVFEVLGTSFLKMENQILGYIFMALF
                     IAFSYFFMGKAIKKIQVGIAYAVWELLGIILILLVSFIVFKESLTLTQILGIILSIIG
                     IIMINIGEVKE"
     gene            10037..10345
                     /locus_tag="RJ318_001072"
     CDS             10037..10345
                     /locus_tag="RJ318_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7430951.1"
                     /translation="MYIFIIILSALLDIVANLLLKKSDGFKHKIWGLAAIANAILAFF
                     LLSFSLKYVPLSIAYSTWGAIGIIGTCLGGWILYKEKLNKIGILGIIIVIIAVFLLNY
                     "
     gene            complement(10363..11955)
                     /locus_tag="RJ318_001073"
     CDS             complement(10363..11955)
                     /locus_tag="RJ318_001073"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDV7430952.1"
                     /translation="MKSIIFNEIKKILECDFALENPKDKNLAHFATPLAFSLAKELKK
                     SPMLIASDLASKFQNHDCFESVEAVNGYLNFRISKTFLNELANQALTNPNDFTKGEKK
                     QESFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLL
                     GLSILLSVKENTLHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAK
                     DKMLVLIKQNLEQAKIKIDNYVSERSYYDALNTTLESLKEHKGIYEQEGKIWLASSQK
                     GDEKDRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFL
                     GFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCD
                     THLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQSLNQDGVNL
                     LFEALNLKAILNDAFEARALQKIPDYLKNLAANFHKFYNENKVVGSANENDLLKLFSL
                     VALSIKTAFSLMGIEAKNKMEH"
     gene            complement(11967..12206)
                     /locus_tag="RJ318_001074"
     CDS             complement(11967..12206)
                     /locus_tag="RJ318_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HDV7430953.1"
                     /translation="MGGWSSPSHWLIILLIVVLLFGAKKIPELAKGLGKGIKTFKDEM
                     NNDDEVAKNTQKIEENKNTTNNTNADASIDETKKA"
     gene            complement(12208..12831)
                     /gene="gmk"
                     /locus_tag="RJ318_001075"
     CDS             complement(12208..12831)
                     /gene="gmk"
                     /locus_tag="RJ318_001075"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDV7430954.1"
                     /translation="MKLQGFVLLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKP
                     REGEKNGIHYHFISHEEFQKGIDSDHFLEWARVHENFYGTSLKHTQNALDNGKIVVFD
                     IDVQGFKIARKKMADKIVSVFITTKNKDELKKRLIKRNTDTIIQLEKRLQNASDEMKE
                     LSEYDYLIINDELKQSYEALRAILIAHKFRTKGQNLGQIQNIWNEGE"
     gene            complement(12828..>13459)
                     /locus_tag="RJ318_001076"
     CDS             complement(12828..>13459)
                     /locus_tag="RJ318_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430955.1"
                     /translation="NKELQANISDFDDLPVVEEQEKEMDFDDLPEDAEFLGQAKDNEE
                     SEEVLEEFAPVVEEDVQDEMDDFTSNLSTQDQIKEELAQLDELDYGIDSDNSSKVLED
                     FKDEPILDDKELGTNEEEVVVPNLNISDFDTLKESDIQEALGEEILEKNEEPIVSDVT
                     KDDNSEEIVNELSQSIAGAITSSIKDDTLKAALKGMNMNININISFKED"
BASE COUNT         4581 a         2474 c         1747 g         4657 t
ORIGIN      
        1 cttttaagtc ttaaagaatt aagcactaca gtaatagaac taaaacacat tgcaagtgct
       61 gctatatgag gacttaaagt gataaaaggt acaaatcctg ccgcgatagg aatgcaaagc
      121 acattataaa taaaagccca aaaaagattt agcttaataa tactgcgtgt ttttttagca
      181 agtttaaaac atttaaaaat cgctgataaa tcatctttta tcaagataaa atctcctgtt
      241 tttttagcaa gctcatttgc ctttgaaaaa ctcatactca cacttgcagc agataaagcc
      301 gccgcatcat tgatcccatc tcctacaaaa agagtttttt taaatttttg aatgatttgt
      361 agtttttctt cactcttaag ttgagcataa aattcgtcta tttgtaattc tttggctatt
      421 ttttctacat tttttacatg atcgccgctt aaaataaaag ttttaagatt ttgctttttt
      481 aaatttaaca caagctcttt ggttccatct tttaaagcat tgcttaacaa aacaccgcct
      541 aaacactttt tattcttagc aaaatacacc ctaacatatt ctttaaaagt atcaaaaaag
      601 atatcacttt cttttgtgtc aatttcattt tcgtgcaaaa actgtgcatt gcctacgaga
      661 taattatcat tatcttcttt gtattttata ccagaaccca caatcactct tccctcaccc
      721 tttaaatcac aaatttgatc tttatgtaaa gccttagcta taggatgaga gcttaaactt
      781 tcaatttgac ataatttatc aaaatcatct ttagaaagat tgtgtttaaa aatactcaaa
      841 ttttcctttg ttaatgtacc cgttttatca aaaaaagcat acttaactaa ggctaatttt
      901 tctaaagcag caggattttt aataagaatg aaattttttg ccgcatttgc acttgccaca
      961 accaaagcta taggcgttgc aagacctaaa gcacaaggac aagagatcaa aagcacagca
     1021 caagagtgta aaaaagctgt atttaaatct gcttttagca cccaaaaaac aaaaactaaa
     1081 aaagcaaaaa atattatacc ccctacaaag tatttagaaa tttgatctgc taaatttgcc
     1141 aaaggacttt tgatacttcc tgcttcaaaa actagatttt tgatttgttc taaagtacta
     1201 tccatggcct ttttgtttgc tttgatcctt aaagcaccat ttaaaactac tgctcctgct
     1261 tgaacttcat cgccttcttt ttttaaaaca ggcaaaaact ccccatttaa aaaactcata
     1321 tcaagctctg cactccctaa aagcactact ccatctgcaa caatgctttc tccttctttt
     1381 accaaaagta catcgccact tttaacaaaa gaacttgaaa tttctttgat actttcatct
     1441 tcaagcaaaa tttttgtctt ttttgtgtct atattttcta aaattctttg ataatcttgt
     1501 gccttaaatt tagccttact ttcaagatat tttcctaaaa gcacaaagga aataatcatc
     1561 attgcaccac taaaatacaa atcttcttct ttaaaaattt gcaaatacac caaaaaagaa
     1621 tacacaaaag cactcaaagt ccccaaagct acaagggtat tcatatctaa atttttgctt
     1681 ttaaagccta aaaaagcatg agaaaaaaag tctctcccac aataaaatat cccaaaaaaa
     1741 ctcaaagcca tttggatatt ttgagaaaaa gaacttttaa caaacatttc aaaatacata
     1801 ataatcacac tcaaaactat acttaagagc aaattttttc ttaattctaa gtgttttttt
     1861 gccttgtatg cgttcaagct ttgttcatct tctaaaattt caaagcctaa atttttaatt
     1921 tttgcgatga tatccttgcg ttttttttga tcttcaagta aaaaaacccc gctagaattc
     1981 acataagaaa cactagcatc tttaacacca tcaatttttt tacaagctct ttctatagca
     2041 ttagaacaat taacgcaagt cattttgcct atttttatac gcaattcttc cattataaac
     2101 gctctacaat ctcaaaacct aaatcttgaa attcttttgt aaaatttgat acttgatttt
     2161 cttctaaatt taaacttaaa attttttgct ccaaatccac ttctatattt ccaaattcat
     2221 cttcaagaga atttttgatc aaatttacac aattcatgca attaacattt tttactttaa
     2281 atttcatttt cactccttat aggttgtatg gtaatatgcc cgatttcaaa ttcatgcaac
     2341 aacttatgag ataaatcctg agatagtttt tcaaattcct ttagattgca aactcttact
     2401 tttaaatgca tagaggctac tagcatttta ttagtgattt gagtaatatg caaatccact
     2461 acctcatcca cactaggatt taaaagcaaa acttgtctta ctttttctat atccacagga
     2521 gaactttcaa gcaagacatt agcactttgt ttaagcaaga taatcgccca tcttaaaagc
     2581 aagattgata atacaatagc taaaatcgta tctatataaa caatatcact aaaatacacc
     2641 acaatcccac ctataataac cgctaaagaa cccaataaat cgctcatcat atgcaaaaaa
     2701 gcggacttca tattgacatt ttctaaattt gcacccttaa acatcatcaa agcattaatc
     2761 ccatttacca aaaagcccaa aatagctaca attatcatgg ttttagcgtc aatttctttt
     2821 ggattgataa atttttctat agcctcataa atgataaata aagccgataa aataatggtt
     2881 aaagcattga taaaagccac taaaacttca agacgaaaat acccaaaggt cttttgatga
     2941 tcttgccatt tttctacagc tataatggct aaaaaactaa gagctaaggc aaaaacatca
     3001 gaaaacatat gcaaagtatc gcttaaaagt gccaaagaat ttgaaaggat tgaataaata
     3061 aattgcacaa gcatcataga aaaagtcatt aaaagagaaa tttttaaaat ctttttatcc
     3121 acactccttg catcggcatg ggaatgatga tgttcatgag aatgttcttc gtgattatga
     3181 tgacaagatt tgttagctaa aggctcgtgt gataaaaatt tatacatctt atatcctttt
     3241 ttgcttgaca ttttaagata ttaagctaaa aaggatataa atatttgtta tttttataaa
     3301 aattaaaagt caaaaagctc gcctagccaa ctttctttct ttttcttttt ataatagtca
     3361 ttgtgctgat gataagctga gtcattatat cttgactctt gtcttggagc ttggttaaaa
     3421 tttgctgtat tagggacact gcgttctatg attttgtcaa gctctccacg atcaagccaa
     3481 acgccacgac actttggaca ataatcaatc tcaactccac tcctatcact cataaccaaa
     3541 tctacattac aaactggaca taacatacaa tacctttttt taaatttttg acttaaaatt
     3601 ataaaaagaa atattaaaca aatttacaac aagttttaat gtttttttgc atgtctagtc
     3661 atcataaaac tttgttcaaa aaatataagc aaggtaacac tcactcctat agctagagcc
     3721 aaagtcacag aaacagttgt aaaaaaataa tcaaaaaatt gaactaaaaa ttcagactta
     3781 gccttcaaat catcactgcg tataaaagaa ataagataca aaatcgcttt ataagcataa
     3841 attccaggta tcataggaat aagagcaggg aaagcgataa tttcagcagg agttttgatg
     3901 atttttgcta aaacaattcc taaacatcct atgcaaaatg aagcaacaaa agttgcaatt
     3961 gctaaagttt gaaaatgaaa atattccacc aaggtaaaac gaagtccatg tgcaattgcc
     4021 gctaaaagag cagataaaat aagggttttt aaaggtggat tacaagcata agcaaagcca
     4081 aatcccgcca cagcagcaaa aaacatatct cttaaaataa attcaatcat cttaaaatcc
     4141 caaaatccga aatactaagc gtcatgtaaa ttccaagtgc tatacaacaa atcaaaatag
     4201 ccacgctgat aatacggcta agccccatta aaatatgatc ttttaatata tcaatcacag
     4261 aatttataaa aaatacccct ggtataagat acaagatact agaacccaaa gccacatcag
     4321 aagtattggt atatcccata tccagtccaa aaaatacaaa ccatgatgag ataaaagaac
     4381 aaaggatgta ttgaattctt aaatcaatct ttgctttagt taaaatatat cttaataaca
     4441 atcccacaaa agttgcaaaa aatactaaat ttccagcacc aaaatcacca ccaaaaagcc
     4501 tgcaaaaagc cgaatttgcc atagaaacaa ataaaagatt aagcaaataa gaatgctttt
     4561 tttgttgaga aatttgccca aaaacgactt ttgctttttc aagatcgtat ttgtgatcat
     4621 atatagccca gcttaaagca cttaaatcaa aaataagttt aaaattaaca tgggcatgat
     4681 gattgggtat aacataagtt ctttgaatgg agttatcatc catatctaca acatttaaag
     4741 taatatgatg aaaaaagaaa ttgatattta tctcatagcc ataaacctca gctattcttc
     4801 ctacgcattt tgccacccta gctgtataag ttccagcacc tagcaaagtt ttagtatata
     4861 tgattaaaaa attagttaat ctttgtatat caggtttttc catattttaa taatctttga
     4921 ttgaatttgt tataattata gcaaatttta aaataaataa ggagaaaaaa tggcaaaaat
     4981 cggtatagtt ggtttaggtt atgtaggagc tgctagtgct tatagcatag ttattcaagg
     5041 aatttgttca gaactttact tatatgatat aaaacaagat ttagctctag ctcatgcaag
     5101 agatttggaa gatatgtcag ccattcattt ttcttataca aaaatttttc atgtgccaaa
     5161 tttagaaaat ttagcttctt gcgatattat cattttagct tttagaaaag aaagcttaaa
     5221 agaattacct agtcgcttag tagaacttaa aaacaatatc ctcgaactta aagacattgt
     5281 cttaacctta aaaaatgcta attttaaagg caaatacatt gtcgcaacaa atccaaatga
     5341 caccataact tactacactc aagtattaag ccaattacct aaaaatcatg tttttggtag
     5401 tggaacaaat ttggatagtt caagacttaa gaaattgtta gccaaagatt taaacataaa
     5461 ttcaaaagat atttttgctt gtatgattgg tgaacatgga gattctcagt ttgcagcact
     5521 ttctaatgca agcgttttag gacaaaattt attagatttt tataagcaaa aattaagcaa
     5581 agatttagac atacaagaac tcgaaaaagc cgtgattagc gagggatatt tcatctatga
     5641 acgcaaagga aggacagaat ttggcatagg aacttcttgt gcaaatttag ccaaagccat
     5701 cctagaagat agaaaaagtt tacatcctgt aagtgtggtt tttgatgata tagctttttc
     5761 aatgcccgct atcataggaa aagatggtat agaaaaggtt tttgaattaa aattcaatga
     5821 aaaagaaaaa ataaaattag aaaattcaaa acaacaaatc aaaaacgcca tacaaagcgt
     5881 aaaagataaa atttaagcct ttttaaaagg ctttttgatt ttaatataaa ttaaacttgc
     5941 taaaatcaca aaaacaatta taataattaa aatttgagtt aaataagttt taatcaactc
     6001 ttcattttgt cctatataat aacccaaaaa tacaagtata gccacccaaa tagcactacc
     6061 aagtgcagta aaaagtataa aatttacaag tttcattttt accaaacctg caggcataga
     6121 gatgtactga cgaatccctg gtaaaagacg acaagtaaag gttgaaaatt ccccatgttt
     6181 gttaaaaaat tcttcaaatt tagcaaattt gacttcgttt ataccaaaat acttacccca
     6241 ttttaataca aaatttttac cccaaaaaaa gcaaatataa taattaatca aagcccctaa
     6301 aacagaacct aaagtcccac taagtataca aagagtgata tcaagttcgc ctttatgtgc
     6361 caaatatcca gcaggtatca taacaacttc acttggaaaa ggtataaaac aactctctaa
     6421 ggtcattaag ataataatac ccaaataccc ccaagcacta gccgtctcaa caataaaaga
     6481 aatgatttct tgcatattag ccttatttga agaaaatttt aaaaaattgt agcttaaaag
     6541 attaaacagt aaaaagcggt tttataccgc tttttttatt tacctgcaac cgaaacttga
     6601 tttggattgt ccgctgcacg agcgatcata cattctttta aaacagcagc atcagctgga
     6661 tcgctaactt ttttattaat ccagcgttca acttgtttca ttgtttttga ctctggctct
     6721 ggagcttcgt attttgccat caaacttgca cagtcagcca aagcaatgat aggtaataaa
     6781 cttgcaaaaa gtatttttct catcttttgc tccttagaat tttacattat acattaacat
     6841 gatattatca gctcttgatt tttctttttt agctcccatt aatggaattc cacgatttcc
     6901 ccatttgttt tggatattgg tatagcttaa gcgtaagaat tgatatctat caagttgata
     6961 aatcacataa acatcatgag ctgttcctct tgtcattctt atattaagcg gatcattgat
     7021 acttggacgg ctcatagtat accagtatct acttccccag aaaaactcat aacctacttt
     7081 taaagccttg gtaaaatcat agcgtccgcc tacatgcaca gcataaccat cttcttcatt
     7141 gaattttaaa ttatttgcga aactactggc agtaggtatc cagaaagcat tagcattgct
     7201 tccattgtag tatcctaaag aagcaaacca gttaaaattt gttccaaaag ctttgtagtt
     7261 ttcaaaatgg atatttgcta tagtggcatc accaagattt ttaacaccgg caccaccaat
     7321 taaattatta attattgttc caccatcaat aggaagtgaa aagtcgctaa tataagctac
     7381 attaagaagt aataagttat cccccatacc ctctatagga agttctcctt ctactgcagc
     7441 atagtaaaga tttgcatcag catctttttg atcgctcatc cagtctctta ccttaccctc
     7501 ttcatcccat tgataagttt taccataagc tgcacggatg gctaccttat gatcttgtaa
     7561 actttcaggt ttataagtga ttactgctgc atcacctaga gcattaatcg ctaaggctgg
     7621 ataagtggat tgtcttagag cattgtttct aagattactt cctggaccat cggttcctgg
     7681 ctgtcttcct acggttgcaa tccactcagg tgtgatatag tagtcaagat aagctctatc
     7741 tacataaagt acaggcccac ttgttcttgt gtttcttcct gcatctaagt caagtggact
     7801 tccactccaa cccatttgag accaattttt agccatagat aaacgaccat agaatttggt
     7861 tttatcatta atatcagcat tcatatttaa atgaagctca ttcatccatt tgttattagc
     7921 actataatct tgtccgtcaa ctttatagtt tgtatttgaa accgctgttg aaaactcaag
     7981 tccaaattta accttgctca aagcagcttg gaattctgtt tcatcggctc tatcattaag
     8041 atcagcaagt tcagctttta cagcttcatt ttgcttagct tgagcttccc tttcttttct
     8101 gatttgtgca agttcagctt gaatttgtgc aagctgtttt tgaagcttgg ttatctcatc
     8161 atctgtattt ttagcaaaaa gtgaagatga aagaagacaa gcacttaaaa taagtgaaaa
     8221 cttagttttc ataatcataa ctccttgtaa ttttgttaca tttagcaaat taaaattgtg
     8281 attatagaaa aaaaagttta aaaaaaaatt atacattaat catttttagc tagtcaaact
     8341 tatgactagc tttgtaaata ttgtagtttc aaaaaagttt taaattttta aattttatcg
     8401 caaattttta tgtctaaaat tttatctcct tggcgtatag agtctaaaac ttctaaactt
     8461 tcttcatctt ttggatcaat ttgcccaaaa acagtatgaa ccccatctaa atgagcttga
     8521 gggctgtgac aaatgaaaaa ttgagaacca cccgtatcgc gtcctgcgtg tgccatagat
     8581 aaagttccac gctcatgttt atgctcttga tcatcacatt cgcaaatgat ttcatatcca
     8641 ggcccaccta caccattgcc gtgtggacaa cctccttgta tgacaaaatt tgggatcaca
     8701 cgatgaaaat ttaaatcttt ataaaatccc tcattagcca aagtagcaaa attacaaacc
     8761 gtttgcggag cctcatcgcc aaaaagtttt aatttcattg tgcctttttc agtttctata
     8821 agagcaaatt tgtattcatt tactttgctt gtgtcaattg tttttatcat tatttctcct
     8881 taatctatat ttgtataaac agcttgaaca tcatcatcat cttctaactt atctaaaagt
     8941 ttttctatat cgctaagctg ttcttcgcta aagcttacag gattgtttgg tatatactca
     9001 agtcctgctt ttttaagaac taaaccctta gtctctatag cagaacttag ctcaccaaag
     9061 gcagtataat caccgctaat tactaactct tcttcatttt gttctaattc ttcaagtcct
     9121 gcatcaatca aatcaagttc taattcttct aaatctcctg caaatttttc aagatgaaaa
     9181 accgcttttc tagtaaacat aaagcctaaa gatccatttt gtaaaacttc tccaccattt
     9241 ttgctaaaaa tagcttttac attagccacg gtgcgtgtag ggttatcgct catacattca
     9301 actataacca aagctccatg tgcagctttt ccttcataat gaatgttttt aatatctgcg
     9361 ctatcttttc cgctcgcacg cttaatagcc gcatctatat tatcttttgg catattattt
     9421 gcttttgctg tagctatagc acttcttaat tttggattca tatcaggatc ggtgccacct
     9481 tctttagcgg ctacttgtat ggctttagca agcttaggaa aaagcttact cattttatcc
     9541 catctagcct ctttagaagc tcttcggtat tcaaacgctc gtcccataaa ttctcacttt
     9601 ctttaaagat ttttaaactt aaaagtataa actaaaaagg ctaattaaag ctttaaatgg
     9661 tatgatttta ccatttattt ttggggagaa gctttttgaa tatcgcaaaa aaagaacttt
     9721 ttgttgcttg gtttttcttg attgctgcta ttgtatttga agttttaggc actagttttt
     9781 taaaaatgga aaatcaaatt ttaggctata tatttatggc tttatttata gctttttctt
     9841 atttttttat gggcaaggcg attaaaaaaa ttcaagtagg catagcctat gctgtatggg
     9901 agcttttagg gattattctt atacttttag tttcttttat agtttttaaa gagagtttaa
     9961 ccttaactca aattctaggc attattcttt ctatcattgg aattatcatg attaatatag
    10021 gcgaggttaa agaataatgt atatttttat cattatttta tcagcattgt tagatatcgt
    10081 agcaaattta ttgctaaaaa aatcagatgg ttttaagcat aaaatttggg gcttagctgc
    10141 gattgccaat gctatacttg cttttttcct actttctttt tctttaaaat atgttccttt
    10201 aagcatagct tactcaactt ggggtgctat aggcatcata ggaacttgtc ttggtggatg
    10261 gattttatat aaagaaaaat taaacaaaat aggaatttta ggtatcatta tcgtaataat
    10321 agcagtattt ttgctaaatt attaaaacag caaaatgctg ttttaatgtt ccattttgtt
    10381 tttcgcttca atacccatta aagaaaatgc ggttttaata ctaagagcaa ccaaagaaaa
    10441 taatttaagc aaatcatttt catttgcaga gcctacaact ttattttcat tgtagaattt
    10501 atgaaaattt gcagctaaat ttttaagata atcaggaatt ttttgcaaag ctctagcctc
    10561 aaaagcatcg tttaaaatag cctttaaatt caaagcttca aaaagcaaat ttacaccatc
    10621 ttgatttaaa ctttgtaagt cagctttcat tacatcatcg atttttttac cagctttagc
    10681 aaacacttga tgaattctag cgtgtgcata gttgatataa tatacaggat tagagctatc
    10741 ttctttttgc aaatcactaa tatcaaattc caaatgagta tcgcattttt tactcaaaaa
    10801 gatataacgc aaagcatcac ttcctatttc atcaactaca tcgctcatca agataaaatt
    10861 tcctgctctt ttgctcattt tataaggctc tccatcttta agcagggaaa ccatttgtgc
    10921 taaaataatc tcaagattat tagagtcaaa tcccaaaaac tccatcgcag ctttcattct
    10981 agggatataa ccatgatgat ctgctcccca gatattaata cactttccat aaccacgact
    11041 cattttatcc ttatgataaa caatatctgc tgccaaataa gtcccgcgtc catcttcacg
    11101 gataattaca cgatcttttt catcgccttt ttgcgaagaa gcaagccaaa ttttaccttc
    11161 ttgctcataa attcccttat gctcttttaa agattctaaa gttgtattta aagcatcata
    11221 atacgatctt tcgcttacat agttgtcaat tttaatcttt gcttgttcta aattttgttt
    11281 aatcaaaaca agcattttat cttttgccca atcagccaaa ctagggatat tttcttcgct
    11341 aaaaaattct ttaccaaatt tttcaaaagc ttcttttgct aaatccgcta tatactcgcc
    11401 tttgtaatat tgctctggat attcaacatt ttcatgaagt gtattttctt tcacacttag
    11461 taaaatagaa agccctagta aataaatttg attacccgca tcattgacat agtattctgt
    11521 atcgaattta tagcccaaat gtcttgcaag tcttgttaag gtgtctccaa aaacagcgcc
    11581 tcttgcatgt cctatgtgta aaggcccagt aggatttgca ctcacatatt caagcaaaaa
    11641 actttcttgt tttttttctc ctttagtaaa atcatttgga tttgttaaag cctgatttgc
    11701 aagttcattt aaaaaagttt tggaaattct aaaatttaaa tacccattta cagcttcaac
    11761 tgattcaaaa caatcatgat tttgaaattt gctcgctaag tcgctagcga tcaacatagg
    11821 ggattttttt aattccttag ccagtgaaaa agccaaaggg gtagcaaaat gcgctaaatt
    11881 tttatccttt ggattttcaa gcgcaaaatc acactctaaa atctttttaa tttcattaaa
    11941 aataatactt ttcaaaagac taaaccttaa gctttttttg tttcgtctat acttgcatca
    12001 gcatttgtat tattagttgt gtttttgttt tcttctattt tttgagtatt ttttgctact
    12061 tcatcatcat tattcatttc atctttaaaa gttttaatac ctttgcctaa accctttgca
    12121 agttctggaa ttttttttgc tccaaaaagc aatacaacaa tcaataaaat aatcaaccaa
    12181 tgacttggac ttgaccaacc acccatttta ttctccttca ttccaaatat tctgaatttg
    12241 ccctagattc tgccctttgg ttctaaattt atgggcgatt aaaatcgctc gcaatgcttc
    12301 ataactttgc tttaactcat cgttaatgat aagataatca tactcactaa gctctttcat
    12361 ttcatcacta gcgttttgta atcttttttc tagttgtatt attgtatcag tatttcgctt
    12421 aataagtctt ttttttaact catctttatt ttttgtagta ataaaaacag aaacaatctt
    12481 atcagccatt ttttttctgg ctattttaaa tccttgcaca tcaatatcaa aaacaactat
    12541 ttttccatta tctaaagcat tttgagtgtg ctttaaagaa gtaccataaa aattttcatg
    12601 cactctagcc cattctagaa aatgatcact atctatacct ttttgaaatt cttcatggga
    12661 tataaaatga taatgtattc catttttttc accctctctt ggtttgcgag ttgttgaaga
    12721 aatagaaaaa taaagctcat cttcaaattc atcaaaaagt ttttttaaaa gagttgattt
    12781 tccagcacca ctaggacctg aaatcaacaa aacaaaacct tgcaatttca atcctcttta
    12841 aaactaatgt ttatatttat attcatattc atacccttaa gagcagcttt taaggtatca
    12901 tctttaatac ttgaagtgat cgctcctgct atgctttggc taagctcatt aactatctct
    12961 tcgctattat catctttagt tacatcactt actataggct cttcattttt ttctaagatt
    13021 tcctctccaa gagcttcttg tatatcactt tctttcaatg tatcaaaatc acttatattt
    13081 aaatttggca caaccacttc ctcttcattt gttcctaatt ctttatcgtc taaaattggt
    13141 tcatctttaa aatcttctaa gaccttgcta ctattgtcac tatcaatacc ataatcaagc
    13201 tcatcaagtt gagctagttc ttctttgatt tgatcttgag tactcaaatt tgaagtaaaa
    13261 tcatccattt catcttgaac atcttcttcc acaacaggag caaactcctc taaaacttcc
    13321 tctgattctt cattatcttt tgcttgacct aaaaattcag catcctcagg aagatcatca
    13381 aaatccattt ctttttcttg ctcttcaacc acaggaagat catcaaagtc gcttatatta
    13441 gcttgtaatt ctttattat
//
LOCUS       DAPIYB010000046        13428 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.047, whole genome shotgun sequence.
ACCESSION   DAPIYB010000046 DAPIYB010000000
VERSION     DAPIYB010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13428
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.047"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..900
                     /locus_tag="RJ318_001077"
     CDS             <1..900
                     /locus_tag="RJ318_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDV7430956.1"
                     /translation="LELFWIKIAIGFGVCLLFVFILMLLLGRRIEKNFNKILDFLDSI
                     SDHKVVILEKGMFKEFNLLNEKLLKTKDKILKNTQKNKKQSDKITLKNTQLASVISAI
                     SHELKNPLSVIDLSLEILKDEKLEDKKLKKELLEKISRQSIKLNALTHKLNFVFNLNS
                     EALQMQEFDLFFLCEKITKNPGFERVVLQGKNTKVKADEFLIEQVIINLLSNALKYSQ
                     KEVILTARDQKIIVQDFGKGIEEDKIKLITKKFYKIDVKSDNSFGLGLFLVKKILNIH
                     KSYLEISSTLGYGSSFSFKLSQG"
     gene            904..2835
                     /locus_tag="RJ318_001078"
     CDS             904..2835
                     /locus_tag="RJ318_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDV7430957.1"
                     /translation="MALIDLIEASKKFGDKIVLNEANFSANEGEKIAIIGKNGEGKST
                     FLKTLLGTLPLDSGRVIRQNGKSIAMLSQTVDFNANLSVKEAIKQELAEIYNALEEYE
                     ILHKKLEEEPNNKDYLKKIDTLMTLIDSKDAWNIESKIIRVLKEFSLLEYENRIISTL
                     SGGEIRRVGLCILLLKNPDILLLDEPTNHLDVYMTSFLEELLKNSKMCVIFISHDRYF
                     IDAIAHKCVEVEQGKLSIFKGGYANYLEKKTQILQSLAKSHETLLKQLKSEEEWLRRG
                     VKARLKRNEGRKERIFKMREEAKKNPGAIKRLKLEISRAALNFNGEKTINRKKMLFEL
                     KNISKNINNKNLFKDFSTRILQGERIAIVGRNGCGKSTLLKILLGQIKQDSGEIKRGE
                     LKIGYFDQARSLVNSDKSLLEIFCPNGGDRVEVRGKNMHVYGYLKNFLFPKEFLDKSV
                     ALLSGGEKNRVALALLFAKEYDVLILDEPTNDLDIATINILEEYLLSFEGAILLVSHD
                     RYFVDKIATKLYAFEGNGYINILHTLYTEYLENEKEIEELDNFALELQTQEQNNNQKE
                     KSSKKLSYKENEILKNHPEKIDFLEQKIAKLNQDLSDPNVYQEIGINKLYQELEVMQK
                     ELEILENEYFLVLEKSENL"
     gene            complement(2866..2940)
                     /locus_tag="RJ318_001079"
     tRNA            complement(2866..2940)
                     /locus_tag="RJ318_001079"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2906..2908),aa:Gly,seq:gcc)
     gene            complement(2951..3037)
                     /locus_tag="RJ318_001080"
     tRNA            complement(2951..3037)
                     /locus_tag="RJ318_001080"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3001..3003),aa:Leu,seq:caa)
     gene            3218..5470
                     /gene="flgL"
                     /locus_tag="RJ318_001081"
     CDS             3218..5470
                     /gene="flgL"
                     /locus_tag="RJ318_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HDV7430958.1"
                     /translation="MRITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDAS
                     TYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSN
                     SQTSREAIAKELERIKESIVQLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINV
                     VTGAGTESPYNIPGWDLFFKADGDYKKQISTNVSFTDNRWDLNKDPDKTKYLTGDSKW
                     QQLIGQSYVKDNSLDADKDFEYDDSKLDFPPTTLYVQGTRSDGTSFKSAVLVKPEDTL
                     EDVMENIGALYGNTPNNKVVEVSMNDSGQIQITDLKQGNNKLDFHAVAFTPQADDKTE
                     LNNIIQAAQDEGITMEDVTNRVMTAALGNPNNGDITNLNNPVTIQINGQNFEIDLKQT
                     DFIKSKMTDTDGNAANGADYDNVYFEKNGNTVYGNVSQVIKGSNAYATDSTKLSEVMA
                     GDSLNGTTLNLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPIMHTNPATGNS
                     GVVTGSNDITYGQINDIIGMFAADKIPTTTIQANNGQINNADYTQIQQLMKDSQATVD
                     VSMDYKGRISVTDKLSSGTNIEISLSDSQSGQFPAPPFTTTSTVQNGPNFSFSANNSL
                     TIDEPNVDIIKDLDSMIDAVLKGNMRADSESENPRNTGMQGALERLDHLADHVSKLNT
                     TMGAYHNTIEGVNTRTSFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTT
                     ISQLSLLNYM"
     gene            5580..8420
                     /locus_tag="RJ318_001082"
     CDS             5580..8420
                     /locus_tag="RJ318_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HDV7430959.1"
                     /translation="MLAPGMGEWVYKANLFLFGEFAYYYPFFLFILNYVYYKRNYKLA
                     NFTRRELFGIGFAFFSSLLLFAVFYPNSGYILELAYAIFSTILGHTGSGIFALLLLLF
                     SLVLLFPKFAKEILKIELDFTYLLKVEQAFKSLLMRVFGGENEKEDVGKSEPIVPKLN
                     ILQDSIYGNLQINKKGETNNLEQIIKDSNINASKNSITTAKENFEKLKNQILDETIEI
                     DKQSLKESRSFVHEHSQQVRNFAQKASKMSISLDEDFNFISEEEVDMIPERFLKPKKL
                     EDIKQIDTNKNLDEPSYKRKNIEIPVSNQEVKPKIFTKELELRENLIKKEKLEQEYKA
                     YQNEILENKVKQEIKKLEEYDAINSSDIIEGNKYSFNSPKTIKTETEESDKINENKNL
                     DKADNIFEFAPIVEELNHPYIEPTPIKNINEIVIEEKNTLDFIQNTETKIDNEKTNDQ
                     EIKLQKAVLAKEIAINQALLREIEQGEIEKPKDFTLPPLDFLANPKEHKQEINESEID
                     KKIYNLLEKLRRFKIGGDVISTYVGPVVTTFEFRPSADVKVSRILNLQDDLTMALMAK
                     SIRIQAPIPGKDVVGIEVPNDEIQTIYLREILQSEVFKNAKSPLTIALGKDIVGNAFV
                     TDLKKLPHLLIAGTTGSGKSVGINSMLLSLLYRNSPKTLRLMMIDPKMLEFSIYNDIP
                     HLLTPVITDPKKAVNALSNMVAEMERRYRLMADAKTKNIENYNEKMKELGGEELPFIV
                     VIIDELADLMMTAGKDVEFYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSR
                     ISYKVGQKIDSKVILDAMGAESLLGRGDCLFTPPGTSSIVRLHAPFASEFEIEKIVDF
                     LKDQQSVEYDESFLKDQQSVGVTTNESFDGEADELYEEAKRVILEDGKTSISYLQRRL
                     KIGYNRSANIIEQLTQNGILSEPDAKGQREIL"
     gene            complement(8506..8778)
                     /gene="rpsO"
                     /locus_tag="RJ318_001083"
     CDS             complement(8506..8778)
                     /gene="rpsO"
                     /locus_tag="RJ318_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDV7430960.1"
                     /translation="MALDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLK
                     IYKKDFSSRLGLLKLVGQRKRLLSYLKRKDYNSYSKLITELNLRDK"
     gene            8953..9363
                     /locus_tag="RJ318_001084"
     CDS             8953..9363
                     /locus_tag="RJ318_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RrF2 family transcriptional regulator"
                     /protein_id="HDV7430961.1"
                     /translation="MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKIL
                     QTLAKDGLLKSFKGAKGGFVLIKEPSQYTIKEIVNSAEKKDISVFECSGGTCPNNKEE
                     NCTLMPMLVNLQNKVDEFLDSITLEDIMKNNGKK"
     gene            9350..11524
                     /gene="flhA"
                     /locus_tag="RJ318_001085"
     CDS             9350..11524
                     /gene="flhA"
                     /locus_tag="RJ318_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HDV7430962.1"
                     /translation="MAKNKIVDLVFPFLGPLIAPVLKAKSLTIVGFLVCILAIIIVPL
                     PSPILDFFLALSIALSVLIILISIYIPKPTDLTTFPTLILIITLFRLSLNIATTRMIL
                     SEGQNGPEAVSEIIAAFGEFVVGGNMVIGVIVFCILVLINFMVVTKGSTRVSEVQARF
                     TLDAMPGKQMAIDADLNAGLIDEQTARARRQEVIAEANFYGAMDGSSKFIKGDAVAGI
                     IITIINIIGGFLIGSFQHDMALSDAASTYTILTIGDGLVSQIPGLITSTATAIIITRA
                     SKDEENFAEGTLTQLLSEYRTLLIVGFVLFIFALVPGLPTLSLGFMALVFLSLGYLTK
                     QVKEGKIDITTVKKSKPSAAAASQSGAGGTTAAPAKKSEEEILKEEEHKINDILKVEI
                     LELELGYGLIKLAENELTERIRSMRRSIAESLGFLMPKIRIRDNLRLKPNEYSFKLKG
                     VSIASAEIYPDKYLAMDSGFITEEIEGIATKEPAFNSDALWIDANLKDEATLNGYIVI
                     DPASVISTHMSELIKAHASELLTRQEVQNLLDKVKNDYPIIVEGALGVAPVSLIQKIL
                     KDLLKHHIPIKDMLTILESVSDIAEVSKSFDMIIEHVRASLARMITNMYLDDKGNLDI
                     FILDSASSAVLMENVQFRDGSYHLPLSVAQTGTLVDTLRAEVAAVANGRIKPFILCVE
                     PQLRKFIADICYNFSINIVVLSFAEIAENTNFNTEGIIRIEL"
     gene            11533..12579
                     /locus_tag="RJ318_001086"
     CDS             11533..12579
                     /locus_tag="RJ318_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HDV7430963.1"
                     /translation="MKIYHLSHTDLDGYACQFIVNFYFKSVKFYNSNYGKEINENFNS
                     IIGDIEKDENFGKAIILITDLNLNLNQCEEFEKICKEKNTKIFLLDHHQSGEECAQKY
                     SWYLLDSKRCATKIVYDFFSKICTPVLELSKFVDVVNAVDIWLSEDENFELGKVFLGL
                     IANAKEINRVMFKESQIDYMFFLLDKAWKFIGKENANILLDNATHFIKKDYFARKNDD
                     TLSNLISYFVVEKLSELKENFSIEYEGHKGILTSNIGNTSVIGNDFLVKNPDYDFFID
                     VSSRKTLSFRANGKIDVSLMAKNLVGGGGHKNASGGLFATFKDGANYNYIKAQIIDLI
                     KSKELKKENNESKQ"
     gene            12563..12805
                     /locus_tag="RJ318_001087"
     CDS             12563..12805
                     /locus_tag="RJ318_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430964.1"
                     /translation="MNQNNNKTLKNELEDLQYELSIVLEAMLLYAGVKREKLENAIEA
                     YIDNIDNVLENSNKEGVDEILEVVEFLKNKYKDFFQ"
     gene            12802..>13428
                     /locus_tag="RJ318_001088"
     CDS             12802..>13428
                     /locus_tag="RJ318_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430965.1"
                     /translation="MKKCILIFFSLYSLSFANIYEKLNDFAYEKKPNKDFKIQEVKLV
                     QFSQENKDCLELLIEASQVRILNSYNSCQKLSKDESFQKFLNEDFLKLYKNNGYLINE
                     NLQNLKNTMQDIMIYYKLRYSFSKDVKDMSKNKNLDILNIDEKDGGTLLYKINNQACV
                     GIELTRHDSRMAMKIYGIENLDKECKLFIQSPSFKDLSYTKKDFKWYYL"
BASE COUNT         5091 a         1737 c         2307 g         4293 t
ORIGIN      
        1 ttagaacttt tttggataaa aatagcaatc ggttttggag tgtgcttgct gtttgttttt
       61 attttgatgt tgttgttagg tagaagaata gagaaaaatt ttaataaaat tttggatttt
      121 ttggattcta taagtgatca taaagttgtt atattagaaa aaggaatgtt taaagaattt
      181 aatttactaa atgagaaact tttaaaaact aaggataaaa ttctaaagaa tacccaaaaa
      241 aataaaaaac aaagcgataa aatcacttta aaaaatactc agcttgctag cgtgatttct
      301 gctatttcac atgagcttaa aaatccttta agcgtgattg atcttagctt agaaatatta
      361 aaagatgaga aattagaaga taaaaaatta aaaaaggaat tgctagaaaa aatttcgcgt
      421 caaagcatta aacttaatgc tttgacccat aagcttaatt ttgtttttaa tcttaatagt
      481 gaagccttgc aaatgcaaga atttgatctt ttttttctat gtgaaaaaat cactaaaaac
      541 ccaggctttg aaagagttgt attgcaaggt aaaaacacga aagttaaggc tgatgaattt
      601 ttaatcgagc aagtgattat aaatttgctt tctaatgctt taaaatatag tcaaaaagaa
      661 gtcattttaa cagcaagaga tcaaaaaata atagtgcaag attttggaaa aggcatagaa
      721 gaagataaaa taaaattgat tacaaaaaaa ttttataaaa ttgatgtaaa aagcgataat
      781 tcttttggtt taggactttt tttagtaaag aaaattttaa atatacataa aagttatctt
      841 gaaatttcta gcactttagg ctatggttct agttttagct ttaaactcag tcaaggataa
      901 aaaatggctc ttatagattt aattgaagct tcaaaaaaat ttggagacaa aatagtttta
      961 aatgaagcaa attttagtgc aaacgaggga gaaaagattg ctattatagg caaaaatgga
     1021 gaaggaaaat ctactttttt aaaaacgctt ttaggcacac ttcctttaga tagcggtaga
     1081 gtaataagac aaaatggaaa aagcatagcc atgctttcac aaaccgttga ttttaatgca
     1141 aatttaagtg taaaagaagc tatcaagcaa gagcttgcag aaatttacaa tgccttagaa
     1201 gaatatgaaa tactgcataa aaaattagaa gaagaaccta acaataaaga ttatcttaaa
     1261 aaaatagata cacttatgac tttgattgat agtaaagatg cttggaatat agaatctaaa
     1321 ataatacgcg ttttaaaaga atttagtttg cttgagtatg aaaatcgcat tatatctact
     1381 ttaagtggcg gagagatacg ccgcgttggg ctttgcatac ttttactaaa aaatcctgat
     1441 attttattgc ttgatgaacc aactaatcat ttagatgtat atatgacaag ctttttggaa
     1501 gaattgctaa aaaattcaaa gatgtgtgtg atttttattt cccatgatag atattttatt
     1561 gacgctatag cacacaagtg tgtagaagta gagcagggta agcttagtat ttttaaaggc
     1621 ggatatgcaa actatttaga gaaaaaaaca caaattttgc aaagccttgc taagagccat
     1681 gaaactcttt taaagcaatt aaaaagcgaa gaagaatggc ttagaagagg ggttaaagca
     1741 agacttaaaa gaaatgaagg acgaaaagaa cgcattttta aaatgcgtga agaagcgaaa
     1801 aaaaatcctg gggcaatcaa acgcttaaaa cttgaaattt caagagcggc tttaaatttt
     1861 aatggagaaa aaacgatcaa tcgtaaaaaa atgctttttg agcttaaaaa tataagcaaa
     1921 aatataaaca ataaaaatct ttttaaagat ttttcaacgc gtattttaca aggtgaacgc
     1981 atagctatcg taggaagaaa tggttgtgga aaatcaacat tgttaaaaat tcttctaggg
     2041 caaataaaac aagatagcgg tgaaataaaa cgcggagagc ttaagatagg atattttgat
     2101 caggctagaa gcttggtaaa ttctgataaa agcttgcttg aaattttttg tcccaatggt
     2161 ggagataggg ttgaagttcg tggtaaaaat atgcatgttt atggatattt gaaaaatttt
     2221 ctatttccta aggaattttt agataaaagc gtggctcttt taagcggcgg agagaaaaat
     2281 cgcgttgctt tagccttgct ttttgctaaa gaatatgatg ttttgatttt agatgagcca
     2341 actaatgatc ttgatatagc tacgattaat atattagaag aatacttact tagttttgaa
     2401 ggggctattt tgctagtatc acacgataga tattttgttg ataaaatcgc aacaaaactt
     2461 tatgcttttg agggaaatgg atatataaat attttacaca ctctttatac tgaatatctt
     2521 gaaaatgaaa aagaaattga agaattggat aattttgctt tagagcttca aacccaagag
     2581 caaaataata accaaaaaga aaaaagctcc aaaaaattga gctacaaaga aaatgagata
     2641 ttaaaaaacc atcctgaaaa aatagatttt ttagagcaaa agatagctaa attaaatcaa
     2701 gatttatccg atccaaatgt atatcaagaa ataggtatta acaagcttta tcaagagctt
     2761 gaagtaatgc aaaaagaact tgaaattcta gaaaatgagt attttttagt attagagaaa
     2821 agcgagaatt tataattaaa gagattttat atttttttta ctctatggag cgggaaacga
     2881 gattcgaact cgcgacccca accttggcaa ggttgtgctc tacccctgag ctattcccgc
     2941 aaaaaataag tggtgcccga ggtcggactc gaaccgacac aaggttgccc ttaccagatt
     3001 ttgagtctgg cgcgtctacc agtttcacca ctcgggctca tttttaagat ttaaagctaa
     3061 aattatactt ttttaggcta aaaaatactt taaaaataaa aagtattttc aaaaagacaa
     3121 tataaaatta tataatttaa atttttggaa cagttattgc ttttgtttat tagcaatgtt
     3181 tgaaaagatt ttaactttaa tactttagag gaaaaaaatg agaattacaa ataaacttaa
     3241 cttcacaaat agtgtgaata attctatggg cggtcaaagt gctttatatc agatatctca
     3301 acaacttgct tcaggtttga aaatacaaaa ttcatatgaa gatgcaagca cttatataga
     3361 taatacgcgt cttgaatatg aaattaaaac gttagaacaa gtaaaagaat caacaagtag
     3421 agctcaagaa atgactcaaa atagtatgaa agctttacaa gatatggtta aacttcttga
     3481 agattttaaa gttaaagtaa cccaagctgc aagcgatagc aattctcaaa cctcaagaga
     3541 agctatagca aaagaactag aacgtataaa agaaagcata gttcagcttg caaataccag
     3601 tgttaatggt cagtatcttt ttgcgggttc tcaagttgca aacaaacctt ttgattctaa
     3661 tggaaattat tatggagata aaaataatat taatgtagta actggagctg gaactgaaag
     3721 cccatacaat ataccaggtt gggatttatt ttttaaagca gatggagact ataaaaaaca
     3781 aataagcact aatgttagtt ttacagataa tcgttgggat ttaaataaag accctgataa
     3841 aactaaatat ctcacaggag attctaaatg gcaacaactt atcggacaaa gttatgtaaa
     3901 agataatagc ttagatgctg acaaagactt tgagtatgat gatagcaaac tagattttcc
     3961 tccaacaact ctttatgttc aaggtacaag atccgatgga acaagtttta aaagtgctgt
     4021 actcgtcaaa cccgaagata ctttagaaga tgtaatggaa aatattggag ctctttatgg
     4081 taatactcca aataataaag tagtagaagt aagtatgaat gatagtggtc aaattcaaat
     4141 tacagatcta aagcaaggta ataataaact cgattttcat gctgtagctt tcacaccaca
     4201 agctgatgat aaaactgaat taaataatat tatccaagca gcacaggatg aaggcattac
     4261 aatggaagat gttacaaaca gggttatgac tgctgcacta ggaaatccca ataatggaga
     4321 tattacaaat ttaaataatc ctgtaaccat tcaaattaac ggacaaaact ttgaaattga
     4381 tttaaaacaa actgatttta tcaaaagtaa aatgacagat acagatggaa atgctgctaa
     4441 tggagctgat tacgataatg tgtattttga aaaaaatggc aatactgttt atggtaatgt
     4501 ttctcaagtt atcaaaggaa gcaatgctta tgccactgat tcaaccaaac ttagcgaggt
     4561 aatggcagga gatagcctaa atggtactac tttaaattta aaagtcaatt ccaaaggtgg
     4621 aaattcttac gatgttacta taaatttaca aacttcaact gtaagctatc ctgatcctaa
     4681 taatccaggt caaaccataa gctttcctat tatgcatact aatcctgcaa ctggaaatag
     4741 tggggttgtt acaggatcaa atgatattac ttatggtcaa attaatgata ttataggtat
     4801 gtttgctgca gataaaattc ctacaacaac catacaagcc aataatggtc aaattaataa
     4861 tgcagattat acccaaatac aacaactcat gaaagattca caagctactg ttgatgtaag
     4921 tatggattat aaaggtcgta ttagtgttac tgataaactt tcatcaggaa ccaatataga
     4981 aatttctctt agtgattctc aaagtggcca atttccagca cctcctttta ccacaacttc
     5041 tactgtacaa aatggtccaa attttagttt tagcgcgaat aattctttaa ctatagatga
     5101 gccaaatgtg gatattatta aagatttaga ttcaatgatt gatgctgttt taaaaggcaa
     5161 tatgagagca gactccgaaa gtgaaaaccc tagaaataca ggtatgcaag gagctttaga
     5221 aagacttgat catttagcag atcatgttag caagcttaat acaactatgg gagcatatca
     5281 taatactatc gaaggtgtta atacacgcac atccttttta agcgttaatg tccaaagtat
     5341 aaaatcaaat gtgattgatg tagattatgg tgaggcaatg atgaatttaa tgcaagttca
     5401 acttgcatat caagcttctc ttaaagctag tacaacaatt tctcaactta gcttattaaa
     5461 ttatatgtaa aattttttat ggtataattt ggctttgatt ttattttcaa ggaaagaata
     5521 ttaaaaaaga agccattttt accagctcca cgcttgttat tttttatctt tgtctttgta
     5581 tgctagcacc tggcatggga gaatgggttt acaaggctaa tttattttta tttggagaat
     5641 ttgcgtatta ttatcctttt ttcttattta ttttaaatta tgtttattat aaaagaaatt
     5701 acaaattagc taattttaca agaagagagc tttttggtat aggatttgcc tttttctcga
     5761 gtttgctttt atttgcagtt ttttatccta attcaggcta tatactagag cttgcttatg
     5821 cgattttttc tactattttg gggcatactg ggagcggaat tttcgctctt ttacttctac
     5881 tattttcttt ggttttattg tttccaaaat ttgcaaaaga aattttaaaa atagaattag
     5941 attttactta tttattaaaa gtagaacaag cttttaaatc tttacttatg cgtgtatttg
     6001 gtggagaaaa cgagaaagaa gatgtaggta aatcagaacc tatagttcca aaattaaata
     6061 ttttgcaaga tagtatttat ggaaatttac aaataaacaa aaaaggggaa accaataact
     6121 tagaacagat aattaaagat agcaatatca atgcaagtaa aaattcaatt accacggcca
     6181 aggaaaattt tgaaaaacta aaaaatcaaa ttttagatga aaccatagag attgataaac
     6241 aaagtttaaa agaatcaaga agttttgttc atgagcattc tcaacaagtg cgaaatttcg
     6301 cacaaaaggc tagtaaaatg agcattagtc ttgatgaaga ttttaatttt atttcagaag
     6361 aagaggtaga tatgattcct gaacgttttt taaaacctaa aaaacttgaa gatataaagc
     6421 aaatagatac aaataaaaat ttagatgagc caagttataa acgtaaaaat attgaaattc
     6481 cagtttctaa tcaagaagtt aaaccaaaaa tttttacaaa agagcttgaa cttagagaga
     6541 atttgataaa aaaagaaaaa ctagaacaag aatacaaagc ctatcaaaat gaaattttag
     6601 aaaataaagt aaaacaagaa attaaaaaat tagaagaata tgatgcgata aattcaagcg
     6661 atattataga agggaataaa tatagtttta atagcccaaa aacaattaaa acagaaacag
     6721 aagaatcaga caaaataaat gaaaataaaa atctagataa agcagacaat atctttgaat
     6781 ttgctcccat tgtagaagag ttaaatcatc cttatataga acctactcct ataaaaaata
     6841 taaatgaaat agttatagaa gaaaaaaata cactcgattt tatccaaaat acagaaacta
     6901 aaatcgataa tgaaaaaaca aatgatcaag aaattaaact tcaaaaagca gttttagcca
     6961 aagaaattgc tattaaccaa gctttattgc gtgaaataga gcagggcgaa atagaaaaac
     7021 caaaagattt caccttgccg ccattagatt ttttagctaa tccaaaagaa cacaaacaag
     7081 aaatcaatga aagtgaaata gataaaaaaa tttataatct tcttgaaaaa ttgcgtcgtt
     7141 ttaaaatagg cggcgatgtt ataagcactt atgttggtcc tgtggtaact acttttgaat
     7201 ttcgtcctag tgcagatgtg aaagtaagtc gtattttaaa tttacaagat gatttaacta
     7261 tggctttaat ggcaaaatca atccgtattc aagctccaat accaggaaaa gatgttgtag
     7321 gtatagaagt tccaaatgat gaaattcaaa ccatttattt aagagaaatt ttacaaagtg
     7381 aagtttttaa aaacgctaaa agtcctttaa ccatagcttt aggtaaagat atagtaggca
     7441 atgcttttgt aaccgatctt aaaaaacttc cgcatttact catcgcagga acgacaggta
     7501 gtggtaaaag tgtggggata aattctatgc ttttaagtct tttatatcgc aactctccaa
     7561 aaaccttgcg tttgatgatg atagatccta agatgcttga atttagcatt tataatgaca
     7621 ttcctcatct tttaactcct gttatcacag atccaaaaaa agcagtcaat gcgctttcaa
     7681 atatggtagc tgaaatggaa agacgctatc gcttaatggc tgatgcaaaa accaaaaata
     7741 tagaaaatta caatgaaaaa atgaaagaat taggcggaga agaacttcct tttattgtag
     7801 taattatcga tgaacttgct gatttgatga tgactgcggg taaagatgta gaattttata
     7861 taggaagact tgcgcaaatg gcaagagcaa gtggaatcca cttgattgta gctacacaac
     7921 gaccttctgt tgatgttgta acaggactaa ttaaagcgaa tttaccaagt agaatttctt
     7981 ataaagtagg gcaaaaaatt gactctaaag ttattttaga tgctatgggt gctgaaagtt
     8041 tacttggaag aggggattgt ttatttactc ctcctggaac aagctctata gtgcgtttgc
     8101 atgcgccttt tgcaagcgaa tttgaaatag aaaaaatcgt ggattttcta aaggatcaac
     8161 aaagcgtaga atatgatgaa agctttttaa aggatcagca aagcgtaggt gttacaacaa
     8221 atgaaagctt tgatggggaa gcagatgagc tttatgaaga agctaaaaga gtaatcttag
     8281 aagatggaaa aacaagcatt tcttatttac aacgccgttt aaaaatcggc tataaccgct
     8341 ctgcaaatat tattgaacaa cttacgcaaa acgggatttt aagcgaacct gatgccaaag
     8401 gacaaaggga aatcttgtaa gatttttctt gtgtttttga tatataaaac tgattacaaa
     8461 agaagaaatt taaaaggcaa aagccccgta aaaagggctt aaaaattatt tatctctaag
     8521 atttaattca gtaattaact tactataaga attataatct tttcttttaa gataagataa
     8581 aagtcttttt ctttgaccta caagttttag aagtcctaat cttgatgaaa agtctttttt
     8641 gtagattttt aaatgttctg taagttctgc aattcttgca gttaaaagag ctacttgaac
     8701 ttctgttgaa ccagtatcac ctggtttttt agcgaatttc gcaactattt ctgctttttt
     8761 ggccgaatcc aaagccatga tagacctcct gattggtaaa ataataaaat taaagaactg
     8821 taattttatc ttaaaaagca aaaaataaac tgaatttatc ttttttagaa ggttttgtca
     8881 aaatttaagt ctttttctaa gaattattta ttataattac agctatttct gtagttataa
     8941 caaggagaat ctgtgctatt taccaaagct agcgaatacg ctttactttc tttaatttat
     9001 atttctcaaa aagaaacacc tcaagatgta gattctttag ctttagagct tgatattcct
     9061 aaaagttttt tagctaaaat tttacaaact ttagctaaag atggcttgtt aaaatccttt
     9121 aaaggggcaa aaggtggttt tgttttaatc aaagaaccaa gtcaatatac tataaaagaa
     9181 attgttaata gtgctgaaaa aaaggatatc agtgtatttg aatgcagtgg tggcacttgt
     9241 ccaaataata aagaagaaaa ttgcacctta atgcctatgt tagtaaattt acaaaataaa
     9301 gtagatgaat ttttagattc tattacttta gaagatatta tgaaaaataa tggcaaaaaa
     9361 taaaatagtc gatttagttt ttcctttctt ggggccttta atcgctcctg ttttaaaagc
     9421 taaaagcttg actattgttg gttttttagt ttgtatttta gctattatta tagttccttt
     9481 accaagtcct attttggact ttttcttggc tttaagtata gctttatcgg tattaattat
     9541 tttaatttct atttatatac ccaaaccgac agatttaaca acttttccaa ctttaatctt
     9601 gattatcact ttatttaggc tttcattaaa tatagctacc acaaggatga ttttaagcga
     9661 agggcaaaac ggccctgaag ctgtgagtga gattatagca gcatttggag aatttgttgt
     9721 tggtggaaat atggtcattg gcgtgattgt attttgtatt ttagtattga ttaatttcat
     9781 ggttgtaaca aaaggtagta caagggtttc tgaagtacaa gcaagattta cacttgatgc
     9841 gatgccgggt aaacaaatgg ctattgatgc ggatttaaat gcaggactta ttgatgaaca
     9901 aaccgctaga gcaagacgtc aagaagttat tgctgaggca aacttctatg gtgcaatgga
     9961 tggttcttct aaatttatca aaggagatgc tgttgcagga attatcataa ctattataaa
    10021 tatcataggt ggttttttaa taggatcttt tcagcacgat atggctttaa gcgatgctgc
    10081 ttctacctat actattttaa ccataggtga tggacttgta tctcaaattc cagggcttat
    10141 tacttctact gcaaccgcta taattatcac tcgtgcaagc aaagatgagg aaaattttgc
    10201 agaaggaact ttaactcaac ttttaagcga atatcgcacg cttttaatag taggttttgt
    10261 actttttatc tttgcgttag tgcctggttt gccaacttta tccttgggct ttatggcttt
    10321 agtattttta agccttggct atcttaccaa gcaggttaag gaaggtaaaa ttgatataac
    10381 tacagttaaa aaaagcaaac caagtgccgc agctgcatct caaagtggag caggtgggac
    10441 aacggcagcg cctgctaaga aaagcgaaga agaaattctc aaagaagaag agcacaagat
    10501 taacgatata ctcaaagttg aaattttaga acttgaactt ggatacggac ttattaagct
    10561 tgctgaaaac gaacttacag aaagaattcg ctcaatgaga agaagtattg ctgaaagttt
    10621 aggattttta atgccaaaaa taagaataag agataattta agacttaaac caaatgagta
    10681 tagttttaaa ctcaagggcg tgtctatagc aagtgctgaa atttatccgg ataaatattt
    10741 agccatggat agtggtttta tcacagaaga gatagaaggg attgctacaa aagaacccgc
    10801 ttttaactct gatgcacttt ggattgatgc gaatttaaaa gatgaagcaa cattaaatgg
    10861 ctatatagta atagatcctg caagtgttat ttcaacacat atgagcgaac ttatcaaagc
    10921 gcacgcaagc gaacttctca cacgccaaga ggtacaaaat cttcttgata aggttaaaaa
    10981 tgattatcca atcatcgtag aaggtgcttt aggtgttgca cctgtaagtc ttattcaaaa
    11041 aattctcaaa gacttgctta agcatcacat accaattaaa gatatgctta ctattttaga
    11101 atctgtaagc gatatagcag aagtaagcaa gagttttgat atgattattg aacatgtaag
    11161 ggcgtcctta gctaggatga ttacaaatat gtatttagat gataaaggaa atttggatat
    11221 ttttatctta gactctgcta gttctgcggt tttaatggaa aatgtacaat ttagagatgg
    11281 aagttatcac ttgcctttaa gtgtagctca aacaggtact ttagtagata ctctaagggc
    11341 tgaagttgcc gcagtagcaa atggtcgtat caagcctttt atactttgcg ttgaaccgca
    11401 gcttagaaaa ttcattgctg atatttgtta taattttagc attaatatag tagtgttaag
    11461 ttttgcagaa attgcagaaa atacaaattt taataccgag ggtattatta ggatagaact
    11521 ttaaggaata taatgaaaat ttatcatctt tcacatacag atcttgatgg ctatgcttgt
    11581 caatttatag taaattttta ttttaaaagt gtgaaatttt ataattctaa ttatggcaaa
    11641 gaaattaatg aaaattttaa ctctattata ggcgatatag aaaaagatga aaatttcgga
    11701 aaagctatta ttctaataac agatttaaat ttaaatttaa atcaatgcga agaatttgaa
    11761 aaaatttgca aagagaaaaa tactaaaatt tttcttcttg atcatcatca aagtggcgaa
    11821 gaatgtgctc aaaaatattc ttggtattta cttgattcta aaagatgtgc aactaaaatc
    11881 gtttatgatt ttttctctaa aatctgtact cctgttttag aactttcaaa atttgttgat
    11941 gtggttaatg ctgttgatat ttggctaagc gaggatgaaa attttgaact tggaaaggtt
    12001 tttttaggct tgattgccaa tgcaaaagaa ataaatcgtg taatgtttaa agaatctcaa
    12061 attgattata tgtttttctt gcttgataag gcttggaaat ttataggaaa agaaaatgca
    12121 aatattttac tcgataatgc tactcatttt ataaaaaagg attattttgc cagaaaaaat
    12181 gatgatactc tttctaattt aatttcttat tttgtagttg aaaaactaag tgagctaaaa
    12241 gaaaatttca gcatagaata tgaaggccat aaaggcatct taacttcaaa tataggcaat
    12301 acttctgtta ttggaaatga ttttttagta aaaaatcctg attatgactt ttttattgat
    12361 gttagttcta gaaaaacctt aagttttcgt gcaaatggaa aaatagatgt aagtttaatg
    12421 gctaaaaatt tagtaggtgg tggcggacat aaaaatgcta gtggtggact ttttgcgaca
    12481 tttaaagatg gagcaaatta taattatatt aaggctcaaa ttattgattt aattaaaagc
    12541 aaagaactta aaaaggaaaa caatgaatca aaacaataat aaaaccttaa aaaatgaatt
    12601 agaagattta caatatgagc ttagcatagt tttagaagct atgcttttat acgctggagt
    12661 taaaagagaa aaattagaaa atgcaataga agcttatatt gataatatag ataatgtact
    12721 cgaaaattcc aacaaagaag gggttgatga aattttagaa gtggtggaat ttctaaaaaa
    12781 taaatacaaa gatttttttc aatgaaaaag tgtattttaa ttttttttag tttatattct
    12841 ttaagttttg ctaatattta tgaaaaatta aatgattttg cttatgaaaa aaaaccgaat
    12901 aaagatttta agattcaaga agttaaatta gtgcaatttt cacaagagaa taaagattgc
    12961 cttgaacttt taatagaagc cagtcaagtt agaattttaa atagctataa ttcttgtcaa
    13021 aaattatcta aagatgaaag ttttcaaaaa tttcttaatg aagatttttt aaaactttat
    13081 aaaaataatg gatatttgat taatgaaaat ttacaaaatt tgaaaaatac catgcaggat
    13141 attatgatat attataaact ccgatattct tttagtaaag atgtaaaaga tatgagtaaa
    13201 aataagaatt tggatatttt aaatatagat gaaaaagatg gtggcacttt actttacaaa
    13261 atcaacaatc aagcttgcgt tggaatagaa cttacaagac atgactcaag aatggctatg
    13321 aaaatatacg ggatagaaaa tttggataaa gagtgcaaac tatttatcca atcaccttct
    13381 tttaaagatc tttcctacac aaaaaaggat tttaagtggt attattta
//
LOCUS       DAPIYB010000047        13305 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.048, whole genome shotgun sequence.
ACCESSION   DAPIYB010000047 DAPIYB010000000
VERSION     DAPIYB010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13305)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13305)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13305
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.048"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            62..727
                     /gene="dccR"
                     /locus_tag="RJ318_001089"
     CDS             62..727
                     /gene="dccR"
                     /locus_tag="RJ318_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DccR"
                     /protein_id="HDV7430966.1"
                     /translation="MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDMAYE
                     RYFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFMTSLNTTNDLKQGFDAGCDDYIK
                     KPFELAELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYHNNKALTLPSKEIK
                     LLSLLLKNKNNFLSTERIFEELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGY
                     CYG"
     gene            720..1910
                     /gene="dccS"
                     /locus_tag="RJ318_001090"
     CDS             720..1910
                     /gene="dccS"
                     /locus_tag="RJ318_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DccS"
                     /protein_id="HDV7430967.1"
                     /translation="MAKKVIRQILLIYLTTTGIFLTIFFALWYQKLYEELVVLKGATL
                     RENHRNIVISILNSRFTPIDISAKNIAQSTALKFAIFDAKKIVFSNIDFDLRKAKIEL
                     KGRGICDNKVFFLASMSADHYFLRHASNEEVNTNDGLQILIQGEDVGKDLFWIRTKVF
                     SFAIMAFCILGLISYILVKIALKPLEDKISTLNRFIKDSTHELNTPLSVILMSIEQLE
                     HQNLGDNTKFTRIKLAAKSLSQVYSDLVFYNFPNTLETEKQKFDLRILLEERLEYFKV
                     FFEQKKITLKLDLNQANIFAPKSQISKLIDNLISNAIKYNKKGGVISIILKANFLSIA
                     DTGCGISKSNLNHIFDRYTRFNTDQGGFGIGLSLVKKVCDDNDIKIICESVENQGSVF
                     KLNW"
     gene            complement(1953..3590)
                     /gene="groL"
                     /locus_tag="RJ318_001091"
     CDS             complement(1953..3590)
                     /gene="groL"
                     /locus_tag="RJ318_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344612.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDV7430968.1"
                     /translation="MAKEIIFSDEARNKLYEGVKKLNDAVKVTMGPRGRNVLIQKSFG
                     APSITKDGVSVAKEVELKDSLENMGASLVREVASKTADQAGDGTTTATVLAHAIFKEG
                     LRNITAGANPIEVKRGMDKACEAIVAELKKLSREVKDKKEIAQVATISANSDEKIGNL
                     IADAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKMTVELSSPY
                     ILLFDKKITNLKDLLPVLEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVK
                     APGFGDRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNG
                     AGEKANIDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKK
                     DRVDDALSATKAAVEEGIVIGGGAALIKAKAKIKLDLQGDEAIGAAIVERALRAPLRQ
                     IAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSV
                     ASMLLTTEATISEIKEDKPTMPDMSGMGGMGGMGGMM"
     gene            complement(3611..3871)
                     /gene="groES"
                     /locus_tag="RJ318_001092"
     CDS             complement(3611..3871)
                     /gene="groES"
                     /locus_tag="RJ318_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDV7430969.1"
                     /translation="MNFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVS
                     KEITDIANGDKIVFAKYGGTEIKLDNNEYLVLNLDDILGILK"
     gene            4033..6573
                     /locus_tag="RJ318_001093"
     CDS             4033..6573
                     /locus_tag="RJ318_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430970.1"
                     /translation="MKKIFYGIVAFVVVLLIALYTILFTSFGNNIVANIAQKKIKENA
                     GLDVNITRFNLRFSSLELQANIANMADCNLQGALSPFKLGFDLDYLISLNQNYAKNLG
                     LNLNQNLSFGGKIQGKASDFTLDGKGYLLGSNVLLNARMYNYSPIALNLDAQNLKIEE
                     ILHLLSYPSYAKGFLNAQAKISAQNLKPDGNIIIKLDTSYINYEAIKKDFSLDLPLNS
                     NPKAEILANVKEDKIYAVSKIYNDYLNLQTQKTLYDMSKNILSTDFNLNIPSLAKLEK
                     LTKTRLNGSLGVIGETSVVNNALSSLNAQVIGLGGEVKASLKNNKIFADINEASLEKL
                     LALAGYGALVSGNLNAKLLNADLDFSNFDLEAKINNAKINTNELKKIAKIELPNTIFS
                     LDAKANAKNSNISYNALLASNLLNIKKLQGTYNLKNSELNTDLNAFIDDLSQFSAIAG
                     QKLQGKADLNAKAHIIGTQIQNLNANANLADGVIKADSNGKKLDLNIDKLDLSKLFVI
                     AGMPNYASGVVNAKVNLDNIDFSNLNGKANLEAKGILNAATLSKILNKNFPNNTSYDL
                     NTKINFKNNIAQFDSVLNSSLADLTKLQGSFDISKMLLNSDFSLKINDFSKLGFLLDR
                     KLKGKAEFNGKVGFDKSLNFVVNSPNLFEGKLQSTFKDNLLLADLNGVDLSSLAQGLD
                     FMDIYQGKADMKANYNLLSEEGEVNLDMKEGKLKPNLITNALKILTLKDITNDVYRTA
                     NAKALIKKENIKLNLNMQADRSYILVQSGALNSKSGALNLPFDIKLDRANFKGSITGT
                     TENPKVNLNAGSVLNSIKNVVGGGVSDGAKSTGDKVDKAVNKLLNKIF"
     gene            6582..7193
                     /locus_tag="RJ318_001094"
     CDS             6582..7193
                     /locus_tag="RJ318_001094"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDV7430971.1"
                     /translation="MFNGLIREIAKVQSYQNNTLSLKAKYRPNLGDSIAVNGACLSVT
                     KLYEAGFEVELSRESRTHIVIENLKDKVHIEPALRYGDRIDGHLMQGHIDFIGTLEKI
                     QKDENGVDFYISLPKEAMKFMAEKGSIGVDGVSLTINEILKNGIRLTIIPITFKETLF
                     KDYQVGRKINIESDLLARYIYAQLQGKNKGLSWEEVERISYLY"
     gene            7157..7837
                     /locus_tag="RJ318_001095"
     CDS             7157..7837
                     /locus_tag="RJ318_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HDV7430972.1"
                     /translation="MGRSRKNFLSLLENDKVGIFCAFDKDYNVFRAKIHNENLFSHLG
                     FKDIEKCVFMDQIHSHKVIIYDENLKNLSCDGLISKEKNIALCVLSADCLPLILYHES
                     GIIAALHSGRKGSFENILKECVDQITMQNSHLDKNKFHLFILPGICAKNYEIDGEILE
                     FAKKEFKEFVQDDKLDLKALVKFQAQNLGIENIKDCGICSFDDESFFSYRRDKTTKRF
                     VSVVYLKD"
     gene            7839..8042
                     /locus_tag="RJ318_001096"
     CDS             7839..8042
                     /locus_tag="RJ318_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430973.1"
                     /translation="MYERKDLRVLKIIQKAREFGDGDLLNEALVKQLIDADFCEINEK
                     EKEELATLLHSLINAKDKALLSN"
     gene            complement(8039..9199)
                     /locus_tag="RJ318_001097"
     CDS             complement(8039..9199)
                     /locus_tag="RJ318_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDV7430974.1"
                     /translation="MKKLLLLFIFVVQSFAALSVEELTWDNGDTLLKFLQRNSIPMSL
                     YYGLDREDQELASDIAYKIKYQVLKDENNNIEQVLIPISDDLQIHIYKDKDGQYTLAF
                     TPVSYQKEDRILHLTIKSSAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDEVTL
                     YYEQKRRMGKLWGDINIKMAMVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYT
                     RISSPFTTARYHPILKRYRAHLGIDYAAPTGTPVKSAGKGVVTFIGTKGGYGNVIQIK
                     HDSGYMTLYAHLSRFAKIKNGQKVNQGQVIAYVGSTGMSTGPHLHFGVYLNNKAINPA
                     SVVKIAKSELSGKAKENFKHIIAGYEQVVKEALASNQPNPPKEEDFENYIEF"
     gene            9321..10046
                     /locus_tag="RJ318_001098"
     CDS             9321..10046
                     /locus_tag="RJ318_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasminogen-binding N-terminal domain-containing
                     protein"
                     /protein_id="HDV7430975.1"
                     /translation="MFKTIVCFLALNLSLFAVGFDLKPIKSELVKVDDIYGYIKDSDD
                     IKLYSSGVVVQHFSNSQSIIARASVIDKKNGLAKLEFSVFSALKQDALPLPNVLPKVG
                     DEVVLNFLYDRGLVIAPDEQTYNELVREFPQIYFTHIDIFGAQLIRTATLSPKRSDFR
                     QFCDDNAVGILVVALENHAEVVDCQDFNKLYEVPISKPTSVQVPFYSRIGGYKSNFFD
                     FNSQEIGNYYRYYDALINLPKVQ"
     gene            10049..11431
                     /locus_tag="RJ318_001099"
     CDS             10049..11431
                     /locus_tag="RJ318_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDV7430976.1"
                     /translation="MKKEFEQYFKRFLGEENAYFDEIHKRAYSYDATKKHYLPDGVLF
                     PRNEEDIARILKFCNENNIIVIPRGSGSGFTGGALAVNGGVVLAFEKHMNKILEIDLE
                     NLVAVVQPGVINIHLQKEVAKYGLFYPPDPASMEYSSLGGNVSENAGGMRAAKYGITK
                     DYVMALRAVLPSGEIIRAGKRTIKDVAGYNLAGILIASEGSLAVLSELTLKLIPLPKF
                     KKTAFAIFPSVKSAMNAVYKSLASGVSPVSMEFLDNLSIRAVESKFNKGLPIEAGAIL
                     IADVDGNVKEAIDEDLRNLEHYFLEAGASEFKIAKDEQETTDIWFARRNCSQSIAMYG
                     TLKLNEDITVPRSKLPTLLEGIDEISKKYGFKIPCFGHTGDGNVHTNVMVPDKNDKEQ
                     VKKGYEAVEEIFKLTVKLGGTLSGEHGIGLSKAPFMNLAFSEAEMNLMRNIKKAFDPN
                     NILNPFKMGL"
     gene            11435..12241
                     /locus_tag="RJ318_001100"
     CDS             11435..12241
                     /locus_tag="RJ318_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HDV7430977.1"
                     /translation="MKNFFTILLNLRDKEILNYAAALSFYTVLSLIPILFVCFSVFTQ
                     ISSFKAYYEKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFS
                     GYDFVINRITKNEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNF
                     FEILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGTIWYIGKNLFVYYVVYNKTYA
                     SVYGSFSTILFFFIWIYISWIIYLFGLKLYYFLNHNHNEGNKIRKNTKKS"
     gene            complement(12185..>13305)
                     /locus_tag="RJ318_001101"
     CDS             complement(12185..>13305)
                     /locus_tag="RJ318_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HDV7430978.1"
                     /translation="DNALLTHQYIKYNKKNKKYWVLKLQTENFTFYTTSFKDLNLSKN
                     QFLSLRIITHNINFKDYLSKSFYAPSYDFEKLKEKEYNPIISYFLNQHTNEKIKEFYG
                     ALFFALPISLELRNDVNYYGIAHLIAISGYHIGLLFSLIFFILAPIYSFFQKRYFPYR
                     NLRLDLSILIFALLLAYACLIGFVPSFVRSLIMAFWVFYLLCKNIKIINFVTLFCSIL
                     LCISLYPRLLFSIGFLFSILGVFYIFLYMHHFANKFNNLINIILLNIWTFFAMVLPVL
                     YFFPLISYQQILGIILSGIFVIFYPLVLFLHLINYGDLLNFILDEFFKFKIYGTNIHI
                     PFWIFISYLIASLISVRFKYLAFLCIFANFIPFIMIVI"
BASE COUNT         4624 a         1780 c         2186 g         4715 t
ORIGIN      
        1 gataagaatt ttgatacaat gatatatatt taagagattt gaagttagaa agatttaaat
       61 tatggctgct aaaattttac ttttagaaga tgatttgagc ttgagtgaga tcattgaaga
      121 gtttttaaac gatgagggat atgaagtatt tttatgcgat aatgcgcaag aagctttaga
      181 tatggcttat gaaagatatt ttgatctttg gattttagat gtaaaagttc ctttaggaga
      241 tggattttca ttacttaaag aattaagaaa aagcggaaag caaactccag caattttcat
      301 gacttcttta aacacaacaa atgatttaaa acaaggcttt gacgcaggtt gtgatgatta
      361 tataaaaaaa ccttttgaac ttgccgagtt atctatcagg gttaaagctt tgcttaaaag
      421 agctttttca cataaaaatg aagattttga agatttagga gatggattta gatttgaatt
      481 tactacacaa attctttacc ataataataa agccttgact ttaccgagta aagaaattaa
      541 gcttttgtct ttattactta aaaataaaaa caacttttta agtacagaga gaatttttga
      601 agaactctgg gattatgatg aggagcctag tgagctaagt ttaagggctt atgtgaaaaa
      661 tttacgtaaa attttaggaa aagaaaaaat tataaatcaa agaggcaggg gatattgcta
      721 tggctaaaaa agtcattagg caaattttat taatctacct aacaactaca ggtatttttt
      781 taactatttt ttttgcatta tggtatcaaa aattatatga agaattagtt gttttaaagg
      841 gtgccacttt gagagaaaat catagaaaca ttgttataag catcttaaat tctcgtttta
      901 cccctataga tataagtgca aaaaatattg ctcaaagcac agcactaaaa tttgctatat
      961 ttgatgctaa aaagattgtt tttagtaata tagattttga tttaagaaag gcaaagatag
     1021 agcttaaagg tagaggtatt tgtgataata aggttttttt ccttgcttct atgagtgcag
     1081 atcattattt tttaagacat gctagcaatg aagaagtaaa tactaacgat ggtttgcaaa
     1141 ttttaataca gggtgaagat gttggcaaag atcttttttg gattagaacg aaagttttta
     1201 gttttgctat tatggctttt tgcatattgg gtttaatatc ttatatttta gtaaaaattg
     1261 ctctaaagcc tttggaggat aaaatcagca cactaaatcg ttttattaaa gattcaactc
     1321 atgaactcaa taccccatta agtgttattt tgatgagtat agaacaactt gagcatcaaa
     1381 atttaggaga taatactaaa tttacaagga ttaagcttgc tgcaaaaagt ttgtctcaag
     1441 tgtactctga tcttgttttt tataatttcc ctaatacctt agaaacagaa aaacaaaaat
     1501 ttgatttaag aatactactt gaagaaagat tggaatattt taaagtattt tttgagcaaa
     1561 aaaaaattac actaaagctt gatttaaatc aagcaaatat ttttgctcct aaaagtcaaa
     1621 tttctaaatt gattgataat cttataagca atgctattaa atacaataaa aaaggtggag
     1681 taatttctat aattttaaaa gccaattttt taagtattgc ggatacaggt tgtggaattt
     1741 caaagtcaaa tttaaatcat atttttgata gatatacaag atttaatacc gatcaaggag
     1801 gatttggtat agggctttct ttggtaaaaa aagtttgtga tgataatgat attaagatta
     1861 tttgcgaatc tgtagaaaat caagggagtg tttttaaatt aaattggtaa tcagcaagga
     1921 aaatccttgc tgataagagg ttagagcaga tattacatca ttccgcccat gccacccatt
     1981 cctcccatac cgctcatatc tggcatagta ggtttatctt ctttaatttc actaattgtt
     2041 gcttctgtgg ttaaaagcat actagctaca gaaactgcat tgagtaaagc tactctttct
     2101 actttaacag gatcgataat tccactttca agcatattaa catattcacc ttttgcagca
     2161 tcaaatcctg tgttttcatc tttagcattt tctacgctat ttacaaccac acctgcatca
     2221 aatcctgcat tttcagcaat ttgtcttaaa ggtgctctta aagctctttc aacgatagct
     2281 gcgccaattg cttcatcacc ctgtagatca agtttgattt tagcttttgc tttgataagc
     2341 gctgcaccac caccaattac tataccttct tcaactgctg ctttagtagc gcttaaagca
     2401 tcgtcaacgc gatctttttt ctctttcatt tcagtttcag ttgctgcacc tactttaata
     2461 actgcaacac caccacttaa ttttgcaagt ctttcttgta atttttctct gtcataatct
     2521 gaagttgttt cagcaatttg tgctttgatt tgattgactc tcgcatcaat atttgctttt
     2581 tcgcctgcac catttactat ggttgtattg tctttatcga tgattacact agaagcttgt
     2641 ccaagatctt gtatagtcgc actttcaaga gttcttccaa gttcttcaga aatcacttct
     2701 ccacctgtta aaatcgctat atcttcaagc atagcttttc ttctatcgcc aaaacctgga
     2761 gctttcactg ctgaaatatt aagaacaccg cgaagtttat ttacaaccaa agttgcaagc
     2821 gcttcacctt caatatcttc agcgataatt aaaagtggtt tgcctgtttt ttgaatttgt
     2881 tctaaaaccg gtaataaatc ttttaaattt gtaatttttt tatcaaaaag caggatataa
     2941 gggcttgaaa gctctactgt cattttttct gcattagtga taaaataagg gcttaaataa
     3001 cctctgtcaa attgcatacc ttcaactaca tttaattcat cattgattga ttttgcctct
     3061 tcaacagtga taacaccatc tttgcccact ttttccatag catcagcgat taaatttccg
     3121 attttttcat cagagttggc tgagattgta gcaacttgtg caatttcttt tttatctttt
     3181 acttcgcgag aaagtttttt aagttctgct actatagctt cgcaagcttt atccataccg
     3241 cgttttacct cgataggatt tgcacctgct gtgatatttc ttaaaccttc tttgaaaatt
     3301 gcatgagcta aaaccgttgc agtagttgtt ccatcgcctg cttgatcagc tgttttactc
     3361 gctacttctc ttacgagtga agcacccata ttttcaagac tatctttaag ctctacttct
     3421 ttagcaacac ttacgccatc tttagtaatg cttggagcac caaagctttt ttggattaaa
     3481 acattgcgtc ctcttggccc catagttact tttaccgcgt cattaagttt tttaacgccc
     3541 tcataaagtt tatttcttgc ttcatctgaa aaaataattt cttttgccat tttttatcct
     3601 tttttataaa ttattttaaa attcctaaga tatcatctaa atttaaaact aaatattcat
     3661 tattatcaag tttaatttct gttccaccgt atttagcaaa cacgatttta tcaccatttg
     3721 caatatcagt gatttcttta cttactgcta ctacttcacc cattaaaggc ttttctttag
     3781 cattatctgg tataattatg cctgaggctg ttgttttagt ttcttctacg cgtttaacta
     3841 gaacacgctt tcctaaaggt tgaaaattca tttttgtcca tccttaaaaa tattgatttt
     3901 agcactcttt aatttagagt gataatatca tactataaaa aatgaatttt gtcaatactt
     3961 taaattaaaa tatttataaa agtttagttt tatagactaa agttatttta taaaataaac
     4021 taaaggataa aaatgaaaaa gattttttat ggcattgtag cttttgttgt tgtgctttta
     4081 atcgctcttt ataccatact ttttacaagt tttggtaata atatagtggc aaatatagca
     4141 caaaaaaaga tcaaagaaaa tgcgggatta gatgtaaata tcacgcgttt taatttgcgt
     4201 ttttcaagtc ttgaactgca agcaaatatt gcaaatatgg cagattgtaa tcttcaggga
     4261 gctttgagtc cttttaagct tggatttgat cttgactatc ttatttcttt aaatcaaaat
     4321 tatgctaaaa atttaggttt aaatttaaat caaaatcttt cttttggcgg taagattcaa
     4381 ggtaaagcaa gtgattttac tttagatgga aagggttatt tactaggttc aaatgtactt
     4441 ttaaatgcaa gaatgtataa ttacagccct attgctttaa atttagatgc gcaaaatctt
     4501 aagatagaag aaatacttca tcttttatct taccctagtt acgctaaagg ttttttaaat
     4561 gctcaagcaa aaatttcagc acagaattta aaacctgatg gaaatatcat cataaaactt
     4621 gatacaagtt atataaacta tgaggcgata aaaaaagatt tttctttaga cttgccttta
     4681 aattctaatc ctaaagcaga aattttggcc aatgttaaag aagataagat ttatgctgta
     4741 agtaaaattt acaatgatta tcttaactta caaacccaaa aaactcttta tgatatgagt
     4801 aagaatattt taagtactga ttttaattta aatattcctt ctcttgcaaa gcttgaaaaa
     4861 cttacaaaaa ctagattaaa tggtagtttg ggcgtgatag gcgaaacaag tgttgtaaat
     4921 aatgccttat caagtttaaa tgctcaagtt atcggacttg gtggagaggt aaaggcaagt
     4981 ttgaaaaata ataaaatttt tgcagatatt aatgaagcaa gtttggaaaa attattagct
     5041 cttgcaggat acggagcttt ggtttctgga aatttaaatg ctaaactttt aaatgcagat
     5101 ttggattttt ctaattttga tcttgaagca aaaataaaca atgcaaagat taacaccaat
     5161 gagcttaaaa aaattgctaa aatagaactt ccaaatacaa tttttagtct tgatgctaaa
     5221 gcaaatgcaa aaaatagtaa tatttcttac aatgctttac ttgcttcaaa tttacttaat
     5281 atcaaaaaac ttcaaggaac ttataattta aaaaatagtg agttaaatac agatttaaat
     5341 gcttttattg atgatttgtc tcagtttagt gctatagcgg gacaaaaatt acaaggtaag
     5401 gcagatctta atgcaaaagc tcatattata ggtactcaaa tacaaaattt aaatgcaaat
     5461 gcaaatttgg cagatggcgt aatcaaagct gattcaaatg gtaaaaaact tgatttgaac
     5521 attgataaac ttgatttatc taaacttttt gttatagcag gtatgccaaa ttatgccagt
     5581 ggggttgtta atgcaaaagt taatttagat aatatcgatt ttagcaacct taatggtaaa
     5641 gcaaatttag aggctaaagg cattttaaat gctgcaactt taagtaaaat tttaaataaa
     5701 aattttccaa acaatacaag ttatgattta aataccaaaa ttaattttaa aaacaatatc
     5761 gctcaatttg attctgtttt aaattcatct ttagctgatc ttacaaaact acaaggaagt
     5821 tttgatataa gtaagatgct tttaaattcg gattttagtt taaagataaa tgatttttca
     5881 aaactaggct ttttgttaga tagaaaactt aaaggtaagg cagaatttaa tggaaaggta
     5941 ggttttgata agagtttaaa ttttgttgta aatagtccaa atttatttga aggaaaactt
     6001 caaagcacat ttaaagataa ccttttactt gctgatttaa acggagtgga tttaagtagt
     6061 ctagctcagg gtttggattt tatggatatt tatcaaggta aggcggacat gaaggcaaat
     6121 tacaatcttt taagcgaaga aggcgaggtt aatttggata tgaaagaggg taaattaaaa
     6181 ccaaatctta ttaccaatgc tttaaaaatt ttaacactaa aagatattac caatgatgtt
     6241 tatcgcactg ctaatgctaa agctttgatt aaaaaagaaa atatcaagct taatcttaat
     6301 atgcaagcag atcgttctta tattttagta caatcaggag ctttaaattc taaaagcggg
     6361 gctttaaatt tgccttttga tattaaactc gatagagcta attttaaagg aagtattaca
     6421 ggaactacgg aaaatcctaa agtaaattta aatgcaggaa gcgtgttaaa ttctattaaa
     6481 aatgtagtgg gtggcggtgt gagtgacggt gctaaaagta ctggcgataa agttgataaa
     6541 gcggtgaata aattattaaa taagattttt taaggtaaaa aatgtttaat ggactcataa
     6601 gagaaattgc taaagttcaa tcttatcaaa acaatacttt aagcttaaaa gcaaaatatc
     6661 gcccaaatct tggcgatagc atagccgtaa atggagcttg tttaagtgta acaaaacttt
     6721 atgaagcggg ttttgaagtg gagctttctc gtgaaagtcg cactcatata gttatagaga
     6781 atttaaaaga taaagttcat atagaacctg ctttaagata tggcgataga attgatggac
     6841 atcttatgca aggacatatt gattttatcg gcacacttga aaagattcaa aaagatgaaa
     6901 atggagtgga tttttatata tctttaccca aagaagctat gaaatttatg gcagaaaaag
     6961 gaagtatagg cgttgatggg gtaagtctta ctatcaatga aattttaaaa aatggtatta
     7021 ggcttactat tattcctatt acttttaaag aaacgctttt taaagactat caagtaggta
     7081 gaaaaatcaa tatagaaagt gatttacttg ctcgttatat ttatgcacaa ttacaaggta
     7141 aaaacaaagg attatcatgg gaagaagtcg aaagaatttc ttatctttat tagaaaatga
     7201 taaagtcggt attttttgtg cttttgataa ggattataat gtttttagag ctaaaattca
     7261 taatgagaat ttattttctc atttaggttt taaagatatt gaaaaatgtg tttttatgga
     7321 tcaaattcat tctcataaag ttatcattta tgatgaaaat ttaaaaaatc tcagttgtga
     7381 tggacttata agcaaggaaa aaaatatcgc tctttgtgtt ttaagtgcgg attgtctgcc
     7441 tttgatttta tatcatgaaa gtggtattat agcagctttg cattcaggta gaaaaggaag
     7501 ctttgaaaat atcctaaaag aatgcgttga tcaaattact atgcaaaatt cacatttaga
     7561 taagaataaa tttcatcttt ttatcctgcc tggaatttgt gctaaaaatt atgaaataga
     7621 tggagaaatt ttagaatttg ctaaaaaaga atttaaagaa tttgttcaag atgataaact
     7681 tgatttaaaa gctttagtaa aatttcaagc gcaaaattta ggcattgaaa atattaaaga
     7741 ttgtggaatt tgtagctttg atgatgagag ttttttttct tatcgtcgtg ataaaacgac
     7801 taagcgtttt gtgagtgtgg tttatttaaa ggattaaaat gtatgaaaga aaagatttaa
     7861 gggtgttaaa aatcattcaa aaagctagag aatttggcga tggagatttg ttaaatgaag
     7921 ctttggtgaa acaattgatt gatgcagatt tttgtgaaat taatgaaaaa gaaaaagaag
     7981 agcttgcaac tcttctacat tctttaatca atgcaaaaga taaagcgtta ttgagtaatt
     8041 aaaattctat atagttttca aaatcttctt cttttggagg attaggttga ttcgaggcta
     8101 gggcttcttt aacaacctgc tcgtatccag ctatgatatg tttaaaattc tctttcgctt
     8161 ttccactaag ttctgatttg gcgattttta caacagatgc aggatttata gctttattat
     8221 ttaaatatac tccaaaatgc aaatgaggac ctgtgctcat acctgttgaa ccaacatatg
     8281 caattacttg tccttgattt accttttgtc cgtttttaat ttttgcaaaa cgactaagat
     8341 gagcatataa agtcatataa cctgagtcat gcttgatttg aattacattt ccataaccac
     8401 cttttgtgcc tataaaggtt actactcctt tgccagcact tttcacagga gttccagtag
     8461 gtgcagcata gtctatacca agatgggcac gatagcgttt taatatagga tgatatcttg
     8521 ctgttgtaaa aggagaagaa attctagtgt aattcacagg ttttgtaagt aaaaaagatt
     8581 ctaattcttt gccatcacga tcatagaata tatcattata agaaaagact tctctagcgc
     8641 ttttattgat ttctaccatt gccattttta tatttatatc accccaaagt ttacccatgc
     8701 gtcttttttg ttcataatat agggttactt catcaccttt ttggatattg cgaaaattta
     8761 tacttcctcg aaaagcacga accatagcac gagctaaagt actgctacca ctttcttcat
     8821 agacatcttg ataagcagag cttttaatgg ttaaatgtaa aattctatct tctttttgat
     8881 aagatacagg agtaaaagca agagtgtatt gtccatcttt atctttatag atatgaattt
     8941 gtaaatcatc actaattgga attaaaactt gttctatgtt gttgttttca tcttttaaaa
     9001 cttgatattt tattttatag gctatatcag aagcaagttc ttgatcttct ctatcaagtc
     9061 cataataaag cgacataggt atggaatttc tttgtaggaa tttaagcaag gtatctccat
     9121 tatcccaagt tagctcttca acacttaaag ctgcaaaact ttgaacaaca aaaataaata
     9181 aaagcaataa ttttttcatg agataacctt aatttttaaa agaattttga aatttgaaag
     9241 ctatatttta ctttattttt cttacaattg cttaacaaaa aaggattata attctataaa
     9301 tttttattta aggagcaaat ttgtttaaaa ctatagtgtg ttttttagct ttaaacctta
     9361 gcctctttgc ggttggattt gatttaaaac ctataaaaag tgaacttgta aaagttgatg
     9421 atatttatgg ttatattaaa gatagtgatg atataaaact ttattcaagt ggcgtagtag
     9481 tgcaacattt tagcaattcg caaagtatca tcgctagagc aagtgttata gataaaaaaa
     9541 atggtttggc aaaattagaa tttagtgttt tttcagctct taagcaagat gctttgcctt
     9601 taccaaatgt tttacctaaa gtaggtgatg aggttgtttt aaattttctt tatgatagag
     9661 gattggtaat tgctcctgat gaacaaactt ataatgaact tgttagagaa tttccgcaga
     9721 tatattttac ccatattgat atttttggag cacaattaat tagaacggct actctttctc
     9781 ctaagcgttc agattttagg caattttgtg atgataatgc ggtcggcatt ttggttgtgg
     9841 ctttggaaaa tcatgcagaa gttgtggatt gtcaagattt taataagctt tatgaagtgc
     9901 ctataagcaa gccaactagc gttcaggttc ctttttattc tcgtataggt ggatataaaa
     9961 gtaatttttt tgattttaac tctcaagaaa taggaaatta ttataggtat tatgatgctt
    10021 tgattaatct tcctaaggtg caataaacat gaaaaaagaa tttgaacaat attttaaacg
    10081 atttttagga gaagaaaacg cttattttga tgaaattcac aaaagagctt atagctatga
    10141 tgcgacaaaa aaacattatt tacccgatgg ggttcttttt ccaagaaatg aagaagatat
    10201 tgctcgaatt ttaaaatttt gtaatgaaaa taatatcata gtcataccgc gaggctcagg
    10261 atctggtttt acaggaggag ctttagctgt taatggcggg gtggtgcttg cttttgaaaa
    10321 gcatatgaat aaaattttag aaattgatct tgaaaattta gtggctgttg tgcaacctgg
    10381 ggttattaat atacatttac aaaaagaagt agccaaatac ggactttttt atccacctga
    10441 ccctgctagc atggagtatt caagcttagg gggtaatgta agcgaaaatg ctgggggaat
    10501 gagagctgca aaatatggca ttacaaaaga ttatgtgatg gctttaaggg ctgttttgcc
    10561 tagcggagaa atcattcgtg cagggaaacg cactattaaa gatgtagcag gttataattt
    10621 ggcaggaatt ttaatcgcta gtgaaggttc tttggcagtt ttaagtgagc ttactttaaa
    10681 attaatacct ttgcctaaat ttaaaaaaac tgcttttgct atttttccaa gtgtaaaaag
    10741 tgctatgaat gcggtttaca aaagtcttgc tagcggtgta agtcctgtat ctatggaatt
    10801 tttagacaat cttagcatta gagcggttga gagcaaattt aataaaggtt tgcctataga
    10861 agctggagct attttgattg ctgatgtgga tggtaatgtt aaagaggcta ttgatgagga
    10921 tttaagaaat ttagaacatt attttttaga agctggcgct agcgaattta aaatagcaaa
    10981 agatgaacaa gaaaccacag atatttggtt tgctagaaga aattgttctc aaagcattgc
    11041 catgtatgga actttaaaac ttaatgaaga tattacagtt ccgcgttcta aactacctac
    11101 tttgcttgaa ggtatagatg agatttctaa aaaatatggt tttaaaattc cttgctttgg
    11161 acatacaggg gatggaaatg tgcatactaa tgttatggtt cctgataaaa atgataaaga
    11221 gcaggtgaaa aaaggctatg aagctgtgga agagattttt aaattaacag tgaaacttgg
    11281 aggaacttta agcggagagc atggtatcgg actctctaag gcacctttta tgaatttagc
    11341 tttttctgaa gccgaaatga atttaatgag aaatattaaa aaagcttttg atccaaataa
    11401 tatactaaat ccttttaaaa tgggacttta gaaggtgaaa aattttttta ctattttact
    11461 aaatttgcgt gataaggaaa ttttaaatta tgcagcagcg cttagttttt atactgtatt
    11521 atctttaata cctattttat ttgtatgttt ttctgttttt acgcaaattt ccagttttaa
    11581 agcttattat gaaaaagcaa agcaagtaat ttttgctttt ttaataccaa cgcaacaaga
    11641 tgttgttgct acctacatcg atactttttt aaaaaatagt gtaaatttgg gtattgtagg
    11701 tcttattgct atggcattta cttctttagc ttttttttca ggctatgatt ttgtaatcaa
    11761 tcgcattact aaaaatgaac ctaaaggact ttggcaaagt attagttctt attggactct
    11821 tttaactctt gttcctttgg ggcttgggct tagtttttat atttcaggtt ttatccaaca
    11881 aactttagat gattataaaa tagggtttaa tttttttgaa attttaccct ttgtaattat
    11941 ttggggttta ttttttatat cttattcaag ttctgttcat aagggaactc ttaaaagttt
    12001 agctttagta tcttttggag cgggtactat ttggtatata ggaaaaaatt tatttgtata
    12061 ttacgtggta tataataaaa catacgctag cgtttatgga tctttttcta ctattttatt
    12121 cttttttatt tggatttata tttcttggat tatttatctt tttgggctta aactctatta
    12181 ttttctaaat cacaatcata atgaagggaa taaaattcgc aaaaatacaa agaaaagcta
    12241 gatatttaaa tcgcacagag attaaagaag caataagata acttataaaa atccaaaatg
    12301 ggatatggat attagttcca taaattttaa atttaaaaaa ttcatctaag ataaaattaa
    12361 gcaaatctcc atagtttata agatgcaaaa ataatactaa aggataaaat attacaaaaa
    12421 ttccactcaa aataatacct aaaatttgtt ggtagcttat aagtggaaaa aaataaagca
    12481 caggtaaaac catagcaaaa aaagtccaaa tattaagcaa aataatattt ataagattat
    12541 taaatttatt tgcaaaatga tgcatatata aaaaaatata aaaaacacct aaaatagaaa
    12601 ataaaaatcc aatactaaat aaaagtctag ggtaaagaga aatgcacaat aaaatactac
    12661 aaaaaagcgt aacgaaatta atgattttta tatttttaca caatagataa aaaacccaaa
    12721 aagccataat caaggagcgc acaaaagaag ggacaaatcc tattaaacaa gcataagcta
    12781 aaagtagtgc aaaaattaaa atacttaaat ctaaacgtaa atttctataa ggaaaatatc
    12841 ttttttggaa aaaactataa attggagcta aaataaagaa aattaaacta aaaagtaagc
    12901 ctatgtgata accgctaatt gctataaggt gtgctatacc gtagtaattt acatcgtttc
    12961 taagctctaa agatatgggc agtgcaaaaa ataaagcacc ataaaattct ttaatctttt
    13021 catttgtatg ttgatttaag aagtaagata taatgggatt gtattctttt tcttttaatt
    13081 tttcaaaatc ataagaaggt gcgtaaaaac ttttactcag atagtcttta aagttaatat
    13141 tatgggtgat aattctaagg ctcaaaaatt gattcttgct taaatttaaa tccttaaaac
    13201 ttgtagtata aaaagtgaag ttttcagttt gtaactttaa aacccagtat tttttatttt
    13261 ttttattata ttttatatat tggtgcgtta atagagcgtt gtcta
//
LOCUS       DAPIYB010000048        13225 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.049, whole genome shotgun sequence.
ACCESSION   DAPIYB010000048 DAPIYB010000000
VERSION     DAPIYB010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13225)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13225)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13225
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.049"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..1143)
                     /locus_tag="RJ318_001102"
     CDS             complement(<1..1143)
                     /locus_tag="RJ318_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430979.1"
                     /translation="MTINSANPYQNLTLSNPLQNSSALNLIKDSKALDQEGNENSLEQ
                     LSYIFNNTTYASEFGFRINEEGFFDKDLNKIANIPESYDINIKSVRSIAKELAKQDEN
                     LNYNKIDLPYLLNSYHSSLKSINSEFLQDDNAYLSRDLISKLSSGFSTDNGEFLGQIS
                     RIYNNQEEIDLALSNITNLNTLMLDNKITNFHFDKAIENTSSNEILKPYLTKNAEVSK
                     SGLLMNFIYHDIKTQNEKEFNFFMKPATLELSSHQNLQKILKGETDIEDYIKKENEKK
                     MSFDLYLYINGVDKKTSTQDKLSVFFQQYINYQKDMDLREFANSSSIFQIYIDQNRND
                     FDALKKQYQNQSQDTQRLEEANQLRSSSIENFLDRRQKQANINKILN"
     gene            1299..1490
                     /gene="rpmI"
                     /locus_tag="RJ318_001103"
     CDS             1299..1490
                     /gene="rpmI"
                     /locus_tag="RJ318_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDV7430980.1"
                     /translation="MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRGLR
                     TAKYVHSTNVKAVEKMLGI"
     gene            1584..1937
                     /gene="rplT"
                     /locus_tag="RJ318_001104"
     CDS             1584..1937
                     /gene="rplT"
                     /locus_tag="RJ318_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDV7430981.1"
                     /translation="MARVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSLV
                     YAYRDRRRKKRDFRRLWIVRINAACRLNDLSYSRFINGLKKAGIELDRKILADLAMND
                     AAAFAKIAEAAKKAL"
     gene            complement(1990..2802)
                     /locus_tag="RJ318_001105"
     CDS             complement(1990..2802)
                     /locus_tag="RJ318_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002878296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDV7430982.1"
                     /translation="MGIAKSLVAIFFYEVENFNDFKPRYLKTFIQKYSDFKYYYLNIR
                     AQKLEMTNEINKIILNQLKQNTSEIDKNTSIFKEIFEELENIRRSLTTISESFTNFTN
                     YLEYNLYQSEEKMNLEKEVQSSLKNIDQLNSILDLISGIAEQTILLSLNAGIEAARAG
                     KLGRGFAVVADEVRKLSENTQMGLGEMEGAIKLVIQTIQSIAKSSNSSTQEMNFIRDK
                     TNEFSKIISNLINSGKEISDKLEQRSNVSEDFEKNVNQLKCYEDVLAKLNQY"
     gene            complement(2806..3168)
                     /locus_tag="RJ318_001106"
                     /pseudo
     CDS             complement(2806..3168)
                     /locus_tag="RJ318_001106"
                     /inference="COORDINATES: protein motif:HMM:NF021926.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FIST C-terminal domain-containing protein"
     gene            complement(3093..3647)
                     /locus_tag="RJ318_001107"
     CDS             complement(3093..3647)
                     /locus_tag="RJ318_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDV7430983.1"
                     /translation="MILFSEDMIENLCTNKIKLFSDIKDYTERKKLIEKEVLFINIPF
                     EAHCINTLYYLIYDGLSQSESSLLELLYKHNPYPCALVGGGSSGNMDFSGAFIFYNGE
                     ILKNQALSIHVQFKPKYRFNLMKSQNFNPQSNITFTILDVSLYDKTVRELINKKPFRL
                     KLYVIILTALLKNLKIKCKNILLL"
     gene            4129..4986
                     /gene="cheP"
                     /locus_tag="RJ318_001108"
     CDS             4129..4986
                     /gene="cheP"
                     /locus_tag="RJ318_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheP"
                     /protein_id="HDV7430984.1"
                     /translation="MIGDMNELLLKSVEVLPPLPDTVSKLRKYVSEANSNIETMKVAE
                     IISSDPLMTAKLLQLANSPYYGFTREITTINQVITLLGVGNIINIVMANSIRDNFKID
                     VSPYGLNTQNFLKTCNEEATFIANWLNDEDKKLSHLLVPCAMLLRLGIVIFSNFLIQN
                     HKDKDFLAFLNKNENLALAENEFLGVDHISFLGFLLHRWNFDDVLIESICFVRTPHAA
                     REKVKKSAYALAITDHLFAPHDGSSPFNAKAAVALLKEAKTQGINFDLNNLLSKLPNK
                     AKENLNKED"
     gene            5014..5493
                     /gene="cheQ"
                     /locus_tag="RJ318_001109"
     CDS             5014..5493
                     /gene="cheQ"
                     /locus_tag="RJ318_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cheVAW transcriptional regulator CheQ"
                     /protein_id="HDV7430985.1"
                     /translation="MMKSLILPPNEFLDHYILNAEFHRFAGISKNAYKFWKNAEIGRY
                     QGTRIIFLHRNCILEKHQQALRQCSGLNGFVLASAFCSFTGLAPSHLVEKNNSSIYKL
                     LELKEICGIKFVNLKKFYDFLGLNYHQHIYIEKCHFFSPAPFEKRIKITESMCVGYY"
     gene            complement(5462..6772)
                     /locus_tag="RJ318_001110"
     CDS             complement(5462..6772)
                     /locus_tag="RJ318_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7430986.1"
                     /translation="MSKTLNQKDIKVLGLSSLGGTLEFYDFIIFVFFANYISTNFFPK
                     DLSSFWQMFNTYGIFAAGYLARPLGGVILAHFGDKFGRKRMFMISILLMVIPTFTLAF
                     IPNYESIGFLCIVLLVFIRICQGIAIGGELPGAWVFVYEHAPQGQKRTYLGILTASVV
                     GGILLGSLVFLIMNKIYTQEELHEWAWRIPFFLGGIFGIISAYLRKFLRETPVFEQMK
                     KDKALEKFPLKEVFKKAKMGIVLSMMITWVLTGCIVVMILLMPSYMAKILQINTSIQT
                     YLQIGGILLICLGCIISGILADKIGVIKSCVFFSVFFGIASLLYFNTLYRQNADFNLV
                     ACLYLLVCFFSGVMNFCPLIMSEVFDAKIKFSGLSFSYNIAYAIAGGLTPQLAFFLHS
                     FALNNLSNFWRFSLGLYVFFLAIIALLCAFIFSYLNNTQRTYSQ"
     gene            complement(6775..6930)
                     /locus_tag="RJ318_001111"
     CDS             complement(6775..6930)
                     /locus_tag="RJ318_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="highly acidic protein"
                     /protein_id="HDV7430987.1"
                     /translation="MAYEDEEDLNYDDYENEDEEYPQNHHKNYNYDDDDYEYDDDNND
                     DDFYEMD"
     gene            7023..7496
                     /gene="moaC"
                     /locus_tag="RJ318_001112"
     CDS             7023..7496
                     /gene="moaC"
                     /locus_tag="RJ318_001112"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDV7430988.1"
                     /translation="MKLSHLDEKNHPKMVDVSDKNITLRIATASGIIYMSQEAFDVIK
                     NNTAKKGPVLQTAIVAAIMGVKKTSEIIPMCHPLMLSKVETNIVEFVKECAFKLIVTV
                     KCEGKTGVEMEALSGVSIGLLTIYDMIKAIDKSMRITDIVLESKEGGKSGKFVRS"
     gene            7474..7737
                     /locus_tag="RJ318_001113"
     CDS             7474..7737
                     /locus_tag="RJ318_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 domain-containing protein"
                     /protein_id="HDV7430989.1"
                     /translation="MVNLCDLKKEPQINYPTFWDYKVIFEVHVKASEIFEEILGQREY
                     KFKHSNSSASGKYQSYLLNVYVDSKKDRLDIFDKLKAKAKFVL"
     gene            7727..8887
                     /locus_tag="RJ318_001114"
     CDS             7727..8887
                     /locus_tag="RJ318_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430990.1"
                     /translation="MYFKKEGKMKNTLIIFENSLSNLGKDEASDLLEDLSFNLAYKQI
                     SHNPHETKKVLNSLLVEFLTILKKLDFFDDENVTKVIKALVKASIVDAQNSLYEYISE
                     AELLNKQIENQKNLIKNQISDNFFEFENILQECSFCDEFSGGLNDAILFDIEMLGILK
                     ETAESAFLTTLEKAEDIELTSSEIAKNLVYNAICEAHFEKERILKISSIILNTAFEIA
                     NESMAYAKDLCLGVIKGTRDGIVLAMEKFKASLTYANFEEDVSLKSKELIGIEDDFIA
                     LLKKEIQLQNDPCKSIVENLLEHELDNLFAKFRRLAGESREQLILVLNDIKKNPKIND
                     FNKLTQRKLNRFKQEIFELEKIASEKYKDLNSKKAKKLGVRLWEKAKKFVKK"
     gene            complement(8906..9664)
                     /gene="xth"
                     /locus_tag="RJ318_001115"
     CDS             complement(8906..9664)
                     /gene="xth"
                     /locus_tag="RJ318_001115"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDV7430991.1"
                     /translation="MKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFP
                     KKIYEYPFKHMYFNSAKRAGYSGVMSLCNFNSEVKKCEFFDDEEGRVLEHRFKNIALF
                     NIYFPNGQKDEERLNFKMQFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKA
                     NANTSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDY
                     FFISKGLKDKLKNAFIRDDIFGSDHAPVGIEIDI"
     gene            9782..11320
                     /gene="eptC"
                     /locus_tag="RJ318_001116"
     CDS             9782..11320
                     /gene="eptC"
                     /locus_tag="RJ318_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A/FlgG phosphoethanolamine transferase
                     EptC"
                     /protein_id="HDV7430992.1"
                     /translation="MLRLTWFQFTFFNSLMIVLLNFNLFYFVYEKNTQNWLITFVFIV
                     AYFALVHVICSLLFIKFFTKFFSILFIISSFLSVYFISFYGVLIDSDMMQNVVQTDIK
                     EVKDLLNLKLILFVVLALLLVFYVVKVKIDYYGSFKSHIKIKIINIISGLIVVCAVLI
                     PLSKTFLPFFRNYNEIRMYNTPFYQIYAVYRYYVRFVKAKPEFKTIANDAYRENNHTK
                     KLLVLVVGETARAANYSLGGYTKNDTNFYTKKDNVVFFDNFSSCGTATAVSLPCMFSI
                     SKRENYSSSEFQENAMDVLYKTGVDAVWFDNNSGGCKGVCDRLAYKQKLSSDLDENLL
                     APFKEKLNHLSDQNIIVLHLQGSHGPTYYKRYPSEFKKFTPTCDTNELSKCDSEALIN
                     TYDNTLLYTDYLLSEIIKLLKEQKSYESSLFYLSDHGESLGENGIYLHGMPYAIAPSY
                     QTHIPAIFWSNDKNLMNLAKEYKGLKLSQDNLFSTLLGYFDVKTSVYEPEYDLLNPKL
                     KANP"
     gene            11317..11673
                     /locus_tag="RJ318_001117"
     CDS             11317..11673
                     /locus_tag="RJ318_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDV7430993.1"
                     /translation="MKPKYHFLNNTRYALEGLFALFKNEMAFRIELCIIIPAIVFSFF
                     LKISFLEHLLLISVLILILIVEALNSAIEACVDLITNEWHEKAKIAKDCASAAVFFSV
                     LLALFVWGFILYNIYL"
     gene            11670..11915
                     /locus_tag="RJ318_001118"
     CDS             11670..11915
                     /locus_tag="RJ318_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="HDV7430994.1"
                     /translation="MKFENLIREILGKKRFELLKFLCENADENGFIMIKISDLEEKLH
                     QSKPTIIATFKFLEEKKLFKRLKNGFYQLNIGDKNET"
     gene            11905..12912
                     /gene="pyrC"
                     /locus_tag="RJ318_001119"
     CDS             11905..12912
                     /gene="pyrC"
                     /locus_tag="RJ318_001119"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HDV7430995.1"
                     /translation="MKLKNPLDMHLHLRDNQMLELIAPLSARDFCAAVIMPNLIPPLC
                     NLEDLKAYKMRILKACKDENFTPLMTLFFKNYDEKFLYSAKDEIFGIKLYPAGITTNS
                     NGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVMDRESNFAKIYEKLAKHFPRLK
                     IVMEHITTKTLCELLKDYENLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDK
                     EALCELAFSGYEKVMFGSDSAPHPKDTKECCGCAAGVFSAPVILPVLAELFKQNSSEE
                     NLQKFLSDNTCKIYDLKFKEDKILTLEEKEWQVPNVYEDKYNQVVPYMAGEILKFQLK
                     H"
     gene            complement(12944..13159)
                     /locus_tag="RJ318_001120"
     CDS             complement(12944..13159)
                     /locus_tag="RJ318_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7430996.1"
                     /translation="MVKNLIIKFGRLILDAIAVISFVVALLYSLFMMFSIGFLAGLLS
                     LIVSFIALFLSFFCNLSCYRYQRCSCK"
BASE COUNT         4707 a         1741 c         1946 g         4831 t
ORIGIN      
        1 atttagaatt ttatttatat ttgcttgttt ttgacgacga tctaaaaaat tttctataga
       61 gctagaacgt agttgatttg cttcttctaa tctttgcgta tcttggcttt ggttttgata
      121 ttgtttttta agagcatcaa aatcattgcg attttgatcg atataaattt gaaatattga
      181 acttgaattt gcaaattctc ttaaatccat atctttttgg tagttaatat attgttgaaa
      241 aaatacagat agtttgtctt gagtgcttgt ttttttatct acgccattaa tataaagata
      301 aagatcaaaa ctcatctttt tttcattttc ttttttgatg taatcttcta tatctgtttc
      361 gcccttgaga attttttgta aattttgatg agagcttagt tctaaagtgg caggtttcat
      421 aaaaaagtta aattcttttt cgttttgagt ttttatatca tggtagataa aattcattaa
      481 aagaccagat tttgatactt ctgcattttt agttaaataa ggttttaaaa tttcattaga
      541 agaagtgttt tctatggctt tatcaaaatg aaaattagtt attttattat ctaacattaa
      601 agtatttaaa tttgtgatat tgcttaatgc caaatcaatt tcttcttgat tgttgtaaat
      661 tcttgaaatt tggcctaaaa attctccatt atctgttgaa aaacctgatg atagttttga
      721 aataagatcg cgacttaaat aagcattatc atcttgtaaa aattctgaat ttatagattt
      781 taatgaacta tgatagctat ttaaaagata aggtagatca attttattgt agtttaaatt
      841 ttcgtcttgt tttgcgagtt cttttgctat gcttctaaca cttttaatgt tgatatcata
      901 agattctggt atatttgcaa ttttatttaa atctttatca aaaaaacctt cttcattgat
      961 tctaaatcca aattcactag cataagtggt attattaaaa atataactta attgttctaa
     1021 gctattttca tttccttctt gatccaaagc tttactatct ttaatcaaat ttagagcaga
     1081 gctattctgc aaaggattag ataaggttaa attttgatat ggatttgccg aatttatagt
     1141 cattttaaat ctttccaaaa tattgctgat tttttataag caaaaggtgt gccaagtttt
     1201 ttaaaaatta aattcagtca aaaattagaa aaaatttgat agtatttagc ttttctttta
     1261 atttgaaaaa taaaaattta tctaaataag gaaagcgtat gccaaagatg aaaagcgtta
     1321 aaagcgcagt taaacgcttc aaagtaggta aaaataaaat caaaagaggc tcagctttta
     1381 gaagtcatat tttgactaaa aaacctgcaa aaagaatgcg tggtcttcgc acagctaaat
     1441 atgtgcatag cacaaatgta aaagctgttg aaaaaatgct aggaatttaa gtttttgact
     1501 aaaagtcatt caaactcccc tctgagataa aatttcaagg gtaagctcca aatttggacg
     1561 ccactttatg aaaggaaata aaaatggcaa gagtaaaaac aggtgttgtt agacgccgca
     1621 gacataaaaa agttttaaaa ttagcgcgtg gtttttatag tggacgccgc aaacatttta
     1681 gaaaagcaaa agaacaatta gaaagaagtc tagtctatgc ttatcgtgat agacgccgca
     1741 aaaaaagaga cttccgtcgt ctttggattg tgcgtatcaa tgctgcttgc agactcaatg
     1801 atttaagtta ttcaagattt atcaatggtc ttaaaaaagc aggcattgaa cttgatagaa
     1861 aaattctagc agatttagct atgaatgatg ctgctgcttt tgcaaaaatt gcagaggctg
     1921 caaaaaaagc actttgattt tttagtataa gaatttcaag atttttgatt cttgaaattc
     1981 ttaatttttt cagtattgat ttaatttagc tagaacatct tcataacatt tgagttgatt
     2041 tacatttttt tcaaaatctt cgctgacatt gcttctttgt tccaatttat ctgaaatttc
     2101 tttacctgaa tttataagat ttgaaatgat tttggaaaat tcattagttt tatctcttat
     2161 aaaattcatt tcttgagtac tagaattgga actttttgca atggattgta tggtctgaat
     2221 aactaatttg atagctcctt ccatttcacc tagacccatt tgggtatttt ctgaaagttt
     2281 tctaacttca tcagctacaa ctgcaaatcc acgaccaagt tttccagctc tagcagcttc
     2341 tatacctgca tttaaagata aaaggatagt ttgttcagca atccctgaaa taagatctaa
     2401 aatactattt aattgatcta tatttttcaa agaggattgt acttcttttt ctaaattcat
     2461 tttttcttcg ctttggtaaa ggttgtattc taggtagtta gtgaaattgg taaaactttc
     2521 actaatagtt gtaagacttc ttcttatatt ttcaagttct tcaaaaattt ctttaaatat
     2581 acttgtattt ttatcaattt ctgatgtatt ttgtttgagt tgatttaaga ttattttatt
     2641 aatctcattt gtcatttcta gtttttgagc tcttatatta agataatagt atttaaaatc
     2701 gctgtatttt tgtatgaaag tttttaaata tctaggtttg aaatcattaa aattttcaac
     2761 ttcataaaaa aatattgcca ctaaactttt tgcaattccc actccataaa tttctccaaa
     2821 actagaaaaa ccaactatag gaaaatcatt aaaatggatt tgatttaaat gttctttgtt
     2881 gtgaagcctt cttaagatac aatcgttaaa aattgctcct agtggttttg gtttattaag
     2941 agaaaatttt tcataatctt tttttatagc ttcaataaaa tttgtttttt taagcaagct
     3001 taattcctga gcgctttcta tatcacaata actaaataat gttttatttg ggttgatttc
     3061 cataggggaa ataagatagt cttctccaat ttttaaagca aaagtatatt cttgcatttt
     3121 atttttaagt tcttcaaaag tgcagttaaa ataattacat aaagcttcaa ccggaaaggt
     3181 tttttattaa tcaattcgcg tacggtttta tcatataagc ttacatcaag tatggtaaag
     3241 gtgatattgc tttgaggatt aaaattttga gacttcatta aattaaaacg gtatttaggt
     3301 ttaaattgaa catgtatgct taaagcttga ttttttaata tttctccatt ataaaatata
     3361 aatgctccgc taaagtccat gtttccgcta gacccacccc ctactaaagc acaaggatag
     3421 gggttgtgtt tgtacaaaag ttctaaaaga gaactttcgc tttgacttaa accatcataa
     3481 attaaataat acaaagtatt tatgcagtgt gcttcaaaag gtatatttat aaataaaact
     3541 tctttttcta tcagtttttt tctttctgta taatctttta tatcactaaa aagcttgatt
     3601 ttatttgtgc aaagattttc tatcatatct tcactaaaaa gtatcaagct tattccttgg
     3661 atattttgtt tataaggact gttttcaatg tttgagttag aatcaaggtt gcataataaa
     3721 tcagtagcac tgcttaagat gatatcacat tgctcattta tagaattttg aatcttattt
     3781 cctatgatcg ctagattaag ttgattgaca caaagcctat aattaatttt ggcttgatgt
     3841 ttattttttt taatttttct tcaagttcat tttattgaag atatagagct tctaaaactt
     3901 ttttacttct tctttttttg ttgagctttt atttttaaaa ttaaaaaaac atcaatttta
     3961 ctccattaaa actatttttt aattactagt taactaaatc aagacaccat aaattcgaca
     4021 tttatttgta atttttatta taccttaagt cataaaaaat gcaataagta aattaaaatt
     4081 tagatataat tgcaaattat aataatatta attaaggata aattaaatat gattggagat
     4141 atgaatgagc ttttattaaa aagcgttgaa gtattgccac ctttacctga tactgtaagt
     4201 aagttaagaa aatatgtgag cgaggctaat tcaaatatag aaactatgaa agttgctgaa
     4261 atcatttcaa gcgatccgtt gatgacggct aagcttttgc aattagcaaa ttctccttat
     4321 tatggtttta caagagaaat tacaaccata aatcaagtga ttactttatt aggcgttggt
     4381 aatatcatca atatagttat ggctaactcc attagagata attttaaaat agacgtttca
     4441 ccttatggtt taaatactca aaatttttta aaaacgtgca atgaagaggc aacttttatc
     4501 gcaaattggc ttaatgatga agataaaaaa ctttctcatc ttttagttcc ttgtgcaatg
     4561 cttttaaggc ttggtattgt tattttttca aattttctta tacaaaatca taaggataag
     4621 gattttttag cttttttaaa taaaaatgaa aatcttgctt tagcggagaa tgaattttta
     4681 ggcgtagatc atatttcttt cttgggattt ttgttacatc gttggaattt tgatgatgtt
     4741 ttgattgaaa gtatatgttt tgttcgcact cctcatgctg ctcgcgaaaa agtgaaaaaa
     4801 tccgcttatg ctttagcaat aacagatcat ctttttgctc cgcatgatgg ttcttctcca
     4861 tttaacgcaa aagctgcagt tgctttactt aaagaggcaa aaactcaagg aattaatttt
     4921 gatttaaaca atcttttatc taagcttcct aacaaagcta aggaaaattt aaacaaagaa
     4981 gattaaagag cctttttaag gctctaaatt gtagtgatga aaagtttaat cttacctcct
     5041 aatgaatttt tagatcacta tattttaaac gctgaatttc atcgttttgc tggaatttca
     5101 aaaaatgctt ataaattttg gaaaaatgca gaaataggta gatatcaagg aacaagaatt
     5161 atatttttgc atagaaattg cattttagaa aaacatcagc aagctttaag gcaatgtagt
     5221 ggtttaaatg gttttgtatt ggcaagtgct ttttgttctt ttactggatt agctccctct
     5281 catttagtgg aaaaaaataa ttcttctatt tataaacttt tagagcttaa ggaaatttgt
     5341 gggattaaat ttgttaattt aaaaaaattt tatgattttt tagggctaaa ttatcatcag
     5401 catatttata tagaaaaatg ccattttttt agcccagctc cttttgaaaa gcgtattaaa
     5461 atcactgaga gtatgtgcgt tgggtattat taagataaga aaaaataaat gcacatagca
     5521 aagctataat agccaaaaag aaaacataaa gtcccaaaga aaaacgccaa aaattactta
     5581 aattatttaa ggcaaaacta tgcaagaaaa aagcaagttg cggagttaaa cctccagcta
     5641 tagcataagc aatattatat gaaaaagaaa gtcctgaaaa tttaattttt gcatcaaata
     5701 cttcactcat tattaaaggg caaaaattca tcactccgct aaaaaaacat acaagtaaat
     5761 ataagcaagc tactaggtta aaatcagcat tttgtctata taaagtatta aaataaagca
     5821 agcttgcaat tccaaaaaaa acactaaaaa atacacaaga tttaataacg cctattttat
     5881 ccgctaaaat tccacttata atacacccta ggcaaataag caaaattcca cctatttgaa
     5941 gataggtttg tatagaagta ttaatttgaa gtatttttgc catataacta ggcataagca
     6001 aaatcattac aacaatacaa cctgtcaaaa cccaagtaat catcatagaa agaacaattc
     6061 ccattttagc ttttttaaac acttctttta aaggaaattt ttctaaagcc ttgtcttttt
     6121 tcatttgttc aaaaacagga gtttctctta aaaattttct caaataagca gaaataatcc
     6181 caaaaattcc acctaaaaag aatggaattc tccaagccca ttcatgaagt tcttcttggg
     6241 tataaatttt attcataatt aaaaaaacca aactacctaa taaaattcca cctacaaccg
     6301 aagcggttaa aattcccaaa taagttcttt tttgaccttg tggtgcgtgt tcgtatacaa
     6361 aaacccaagc tccagggagt tccccgccta tagctatacc ttgacaaatg cgtataaaaa
     6421 ctaaaagcac aatacaaaga aaacctatac tttcataatt tggaataaaa gctagagtaa
     6481 aagttggaat aaccattaac aaaatactaa tcataaacat tcttttgcgt ccaaatttat
     6541 ctccaaaatg tgccagtatc acacccccta aaggacgtgc taaatatcca gctgcaaata
     6601 ttccataagt attaaacatt tgccaaaaac tacttaaatc ttttggaaaa aagtttgttg
     6661 aaatataatt tgcaaaaaat acaaaaataa taaaatcata aaattctaaa gttccaccta
     6721 atgatgaaag tcctaaaact tttatatctt tttggttaag ggttttgctc attcttaatc
     6781 catctcataa aaatcatcat cattgttatc atcatcgtat tcataatcat catcatcgta
     6841 attataattt ttatggtgat tttgtggata ttcttcatct tcgttttcat aatcatcgta
     6901 atttaaatct tcttcatctt cataagccat tgttttctcc ttaaataaaa atacaaagct
     6961 tattttatct taaatttgtt tggttttgct ataattttta taatttttta aaaggtgaat
     7021 ttatgaaatt aagtcattta gatgaaaaaa atcatcctaa aatggtagat gtaagcgata
     7081 aaaatattac tttaagaata gccacagcta gtggtataat atatatgagt caagaagctt
     7141 ttgatgtaat taaaaacaat accgcaaaaa aaggtcctgt tcttcaaaca gctattgttg
     7201 cggctataat gggggttaaa aaaacaagtg aaattattcc tatgtgccat cctttgatgc
     7261 tttctaaagt tgaaactaat attgtggaat ttgttaaaga atgtgcattt aagcttattg
     7321 taacagttaa gtgtgaaggt aaaacaggtg ttgaaatgga agctttaagt ggagttagta
     7381 taggactttt aactatatat gatatgatca aggctataga taaatcaatg agaattacgg
     7441 atatagtgct tgaaagcaaa gaaggaggta aaagtggtaa atttgtgcga tcttaaaaaa
     7501 gaacctcaga tcaattatcc tactttttgg gattataagg tgatttttga ggtgcatgtt
     7561 aaggcaagtg aaatttttga agaaatttta ggtcaaagag aatataaatt taaacattcg
     7621 aattcaagtg cgagtggaaa atatcaaagt tatttgttaa atgtttatgt tgatagcaaa
     7681 aaagatcgtt tggatatatt tgataaatta aaagctaaag caaaatttgt actttaagaa
     7741 agaaggaaaa atgaaaaata ctttaattat ttttgaaaat tctttatcaa atctcggtaa
     7801 agatgaagca agtgatttac ttgaagactt gagttttaat cttgcgtata agcaaatttc
     7861 acataatcct catgaaacaa aaaaagtttt aaattctctt ttggttgaat ttttaactat
     7921 tttgaaaaaa cttgattttt ttgatgatga aaatgttaca aaggttatca aagctttggt
     7981 taaggcgagt attgtagatg ctcaaaattc actttatgag tatattagcg aagctgaatt
     8041 attaaacaaa cagattgaaa atcaaaagaa tttgattaaa aatcaaatca gcgataattt
     8101 ttttgaattc gagaatattt tacaagaatg ttctttttgt gatgaattta gtggtggttt
     8161 aaatgatgct attttatttg atatagaaat gcttggaatt ttaaaagaaa ccgctgaaag
     8221 tgctttttta actacattag aaaaggctga agatatagaa cttacaagta gtgaaatagc
     8281 taaaaatctc gtatataatg ccatttgtga agctcatttt gaaaaagaaa gaattttaaa
     8341 aatttcaagt attattttaa ataccgcttt tgaaatagct aatgaatcta tggcttatgc
     8401 aaaagatctt tgtttaggcg tgattaaagg cacaagggat ggtattgttt tggcaatgga
     8461 aaaatttaaa gcttcattaa cttatgcaaa ttttgaagaa gatgttagtt taaaaagcaa
     8521 agaactaata ggtatagaag atgattttat tgctctttta aaaaaagaga ttcaattaca
     8581 aaatgatcct tgtaagagta tagttgagaa tttgctagaa catgaacttg ataatctttt
     8641 tgctaaattt agacgtcttg caggtgaaag cagagagcaa ctaatattag ttttaaatga
     8701 tattaagaaa aatccaaaga ttaatgattt taacaaactt actcaaagaa aattaaatcg
     8761 ttttaaacaa gaaatttttg aattagaaaa aattgctagt gaaaaataca aagatttaaa
     8821 ttccaaaaaa gctaaaaagc tcggtgtaag actttgggaa aaagcaaaaa aattcgttaa
     8881 aaaataatat cccatttttg ggatattaaa tatctatttc tatacctaca ggtgcgtgat
     8941 cagagccaaa aatatcatct cttatgaaag cgtttttaag tttatctttt aaaccctttg
     9001 aaatgaaaaa ataatcaatc ctccagccta catttctttc tcttgctttc attctatagc
     9061 tccaccacga gtatttttct ttgatttcgc cattaatttc tctaaaagta tctataaaac
     9121 caagctttag caaatcatca atccaagctc tttctatagg taaaaaacct gaagtgttgg
     9181 cattggcttt tggatgagta agatcgattt ctttatgagc ggtattgaca tcaccgcaaa
     9241 tgataatttc aaatccatcc tttaaaagct tatccaaata cactaaaaaa tctgcataaa
     9301 attgcatctt aaaatttaaa cgctcttcat ctttttgacc atttggaaaa tagatattaa
     9361 aaagtgcaat atttttaaag cggtgttcta aaaccctacc ttcttcatca tcaaaaaatt
     9421 cgcatttttt tacttcgcta ttaaaattac aaagactcat taccccagaa taccccgctc
     9481 ttttagcaga attaaaatac atgtgtttaa aaggatattc ataaattttt ttaggaaatt
     9541 tatcttcatg tgctttgatt tcttgaaaac ctataaaatc aatttgttct tgtgctatcc
     9601 aatcaagtgc atttttatca caaatagctc ttaagccatt gacattccat gaaagtagtt
     9661 tcattatttt ccttaaaatt ttcattaaaa gtgtaaatca taacataaaa agatttaaaa
     9721 ctacaatcca tttaaaaaaa ttcaataaaa ttaaaagctt aaatttgaag gtgggattta
     9781 tatgcttaga ttaacttggt ttcagtttac tttttttaat tctttgatga ttgtattgtt
     9841 gaattttaat ttattttatt ttgtgtatga aaaaaataca caaaactggc ttataacttt
     9901 tgtttttatt gtggcctatt ttgcacttgt tcacgtgatt tgctctttgc tttttataaa
     9961 gttttttact aaattttttt ctatattatt tataatatca tcttttttaa gtgtttactt
    10021 tattagtttt tatggggtgc ttatagattc tgatatgatg caaaatgttg ttcaaacaga
    10081 cattaaagaa gtaaaagatt tgttaaattt aaaattgatc ttatttgttg ttttggcttt
    10141 attattggtt ttttatgttg ttaaagtaaa aattgattat tatggtagtt ttaaatccca
    10201 tataaaaatt aaaattatca atataatatc aggtttgatt gttgtttgtg cagttttaat
    10261 ccctttaagt aaaactttct tgcctttttt tagaaactat aatgaaataa gaatgtataa
    10321 tactcctttt tatcaaattt atgccgtata tcgctattat gttcgttttg taaaagctaa
    10381 gccagaattt aaaactatag ctaatgatgc ttatagagaa aacaatcaca ctaaaaaact
    10441 tttggttttg gtggtgggtg aaaccgctag agcggcaaat tactctttgg gtggatatac
    10501 taaaaatgat accaattttt ataccaaaaa agataatgta gtcttttttg ataatttttc
    10561 atcatgtgga acagcaacag cggtaagttt gccttgtatg ttttctattt ctaagcgtga
    10621 aaattattca agttcagagt ttcaagaaaa tgcgatggat gtgctttata aaacaggtgt
    10681 agatgctgta tggtttgata ataattctgg tggttgtaaa ggggtttgtg atagattagc
    10741 ttataagcaa aagctttcta gtgatttgga tgaaaattta ctcgcccctt ttaaagaaaa
    10801 attaaatcat ttaagtgatc aaaatataat agttcttcat ttgcaaggtt ctcatgggcc
    10861 aacttattat aaacgctatc caagcgaatt taaaaaattt actccaactt gtgatactaa
    10921 tgaactttca aaatgtgata gcgaggcttt aatcaacact tatgataata ctttgcttta
    10981 tacagactat cttttaagtg agattataaa actattaaaa gagcaaaaaa gctatgaaag
    11041 ttctttgttt tatctttcag atcatggtga aagtttgggt gaaaatggta tttatcttca
    11101 tggtatgcct tatgctatag caccaagtta tcaaactcat attcctgcta ttttttggag
    11161 caatgataaa aatttaatga atttagctaa agagtataaa ggtttaaaac tttctcaaga
    11221 taatcttttt agtactcttt taggatattt tgatgtaaaa acaagtgttt atgaaccaga
    11281 atatgattta ttaaatccta aacttaaggc aaatccatga agcctaaata tcatttttta
    11341 aataacacaa gatatgcttt agaagggctt tttgctttat ttaaaaatga aatggcgttt
    11401 agaattgaac tttgcattat tatccccgcg atagttttta gttttttctt aaaaattagt
    11461 tttttggagc atttgttatt gataagtgtc ttaatactta tcttaattgt agaagcttta
    11521 aattcggcta ttgaagcttg tgttgatttg attacaaacg aatggcatga aaaggcaaaa
    11581 atcgctaaag attgtgcgag tgcggcagtg ttttttagtg tgcttttagc tctttttgtt
    11641 tggggcttta ttttatataa tatttactta tgaaatttga aaatttaata cgagaaattt
    11701 taggaaaaaa gcgttttgaa ttgttaaaat ttttatgtga aaatgccgat gaaaatggtt
    11761 ttattatgat taaaatcagt gatcttgaag aaaaattaca tcaaagtaaa cctaccatca
    11821 tcgctacttt taagttttta gaagaaaaaa aactttttaa gcgtcttaaa aatggatttt
    11881 atcagctaaa tataggagat aaaaatgaaa cttaaaaatc ctttagatat gcatttgcat
    11941 ttaagagata accaaatgtt agaacttatt gcacctttga gtgcaagaga tttttgtgca
    12001 gctgtgatta tgccaaattt aatccctccg ctttgcaatt tagaagatct aaaagcttat
    12061 aaaatgcgta tccttaaggc ttgtaaagat gaaaatttca ctcctttaat gacacttttt
    12121 tttaaaaatt atgatgagaa atttctttac agtgctaaag atgaaatttt tggcattaag
    12181 ctttatccag caggaattac aacaaattca aatggtggag tttcaagttt tgatatagag
    12241 tatttaaaac ctactttaga ggctatgagt gatttaaata ttcctttgct agtgcatggt
    12301 gaaaccaatg attttgtaat ggacagggaa agtaattttg ctaaaattta tgaaaaatta
    12361 gccaaacatt ttccacgact taagattgtt atggagcata ttaccactaa aactttatgt
    12421 gaacttttaa aagattatga aaatttatac gcgacaatca ctttacatca tttaatcatc
    12481 actttagatg atgttatcgg aggtaaaatg aatcctcatc ttttttgtaa gcctatagcc
    12541 aagcgttacg aagataaaga agccctttgc gaacttgctt ttagtggtta tgaaaaagtt
    12601 atgtttggaa gtgatagtgc gcctcatcca aaagatacta aagagtgttg cggttgtgcc
    12661 gcaggtgtat ttagtgcccc agtgatttta cctgttttag ctgaattatt taagcaaaat
    12721 agctcagaag aaaatttgca aaaattttta agcgataata cttgtaaaat ttatgattta
    12781 aaatttaaag aagataaaat tttaacttta gaagaaaaag aatggcaagt accaaatgtt
    12841 tatgaagata aatacaatca agtcgtgcct tatatggctg gagaaatttt gaaatttcaa
    12901 ttaaaacatt gattttccac cttaaaggtg gaaaatttaa gctttattta caagagcatc
    12961 tctgatatct ataacaagat agattacaaa aaaaacttaa aaataaagca ataaaactga
    13021 ctatcaatga caataaacca gctaaaaatc caatgctaaa catcataaaa agagaataaa
    13081 gcaaagctac aacaaaactt atcactgcaa ttgcatcaag aatcaagcgt ccaaatttga
    13141 tgattaaatt tttaaccatt aaaaactcct ttgaaataat gagtgaaatt gtaatcaata
    13201 taagcttaat atttttataa gttat
//
LOCUS       DAPIYB010000049        13064 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.050, whole genome shotgun sequence.
ACCESSION   DAPIYB010000049 DAPIYB010000000
VERSION     DAPIYB010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13064)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13064)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13064
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.050"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..1135
                     /locus_tag="RJ318_001121"
     CDS             <1..1135
                     /locus_tag="RJ318_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2318 domain-containing protein"
                     /protein_id="HDV7430997.1"
                     /translation="LGILSFCTALHYYFLSQDFPIFTSSLIDSEGISSLGFIALALLV
                     CILIFFFLKWQKNFNQKTSFMLFLLLILIESDKALANILLTLMRNSIIETHAFLVSFV
                     GKSNYFGVFGIYVYLIFITFLAFLSLKIRKKNISKKQILDINYRKNEAKTSLINRYFS
                     SVFISCVVSFCIVLYFFMVSSKPLTIDEPKEILPDKNGKFIFDIALLRDNKLHRFAYI
                     SAEGKVIRFFLINKREDKDSPVAVFDACMICGDMGYIKKDGQLICISCNVRIFLPSVG
                     KSGGCNPIPLKYEYDGKKITIDVKDVIAGSNYFSQIKEIEVQDPVSKTKVINTQAPFS
                     YSYKGVTYYFSNQNNYEEFKKDPTKYVEENEAQFLIQRRNDVG"
     gene            1122..2414
                     /locus_tag="RJ318_001122"
     CDS             1122..2414
                     /locus_tag="RJ318_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7430998.1"
                     /translation="MMLAKMIFNSIFKNKIQKFLAFLTCFLATLLLSTMLNITLSIGD
                     EVTKQLKSYGSNILVLPKGSSLSIEIGNELYEPLKNKNYLEEKNLYMIKDIYWRNNIT
                     ALAPFLEGKITIENSQQKALIYGAYFQKAIKIKDDDDFITGIKSLYPYLAVQGEWAKD
                     DSNEIMLGEDFAKNNKLKLGDTIKLIGENNQSKEAKIVGILLHANPKMSNKIIAPLNL
                     AQDLLNKQGLYSSTEVRAFTIPESALSEKVRRMGEEKLDQLEYDKWYCSAYVGSIASQ
                     ISDGLPGADAKALNAISDAQSLVVKKIQSLMGITCIICLIVASIAISSLMSSEIHRRK
                     KEIGLLKVLGANTFQIYLIFASENLIVALFAALLGFIFGTALSQIISLSIFGYFIDIA
                     FVALPLSFIFAGLIALLGCLLPIKNITQLSAAGVLYGR"
     gene            2404..3522
                     /locus_tag="RJ318_001123"
     CDS             2404..3522
                     /locus_tag="RJ318_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDV7430999.1"
                     /translation="MVDKFFLNELFKSISFSYQRLFIIVLSVFIGALTCSAFLNIYFD
                     IDIKLSKELKAYGANVMISPKQDENFISNTEYEKIKENLKARALTPFLYDFLNLGSTS
                     GVVLGTDFRALKITKPFLEVKEGSFSLNDFDENSAFLGVNLAKQLGLKAGNELQIYNP
                     NNGKSIKLTIKGILSSNDEFDSIVLAPLSVVQNLSDRAGINYANAVVYGNFDEVKAKT
                     QAISNEFIDAKPISSVSLSEGLVLGKIKALMFLIILVVLIIVTTSVNTTLSSIIFSRK
                     KEIALRLALGAKKSEIFKLFASECFIVSFFASLIGAFCGIFLANVFGYLIFNSSIDFR
                     FIAVFIALIISLIFAFLAAFFPIKRALKINVCENLKGE"
     gene            3519..4172
                     /locus_tag="RJ318_001124"
     CDS             3519..4172
                     /locus_tag="RJ318_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7431000.1"
                     /translation="MMKKELIKINNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSG
                     KSTLLNILSLMDTPSSGEYILDNENLEQMDEEQKITLRREKIGLVFQQFHLIPYLNAL
                     ENVMLSQYYHSSVDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPEL
                     LLADEPTGNLDEANEQIVLQTLQKLKNEGKTIVLITHNPDLAKFADRTLILQHGVLK"
     gene            4169..4657
                     /locus_tag="RJ318_001125"
     CDS             4169..4657
                     /locus_tag="RJ318_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDV7431001.1"
                     /translation="MKKSLLILSILFLLNACSFENSKDTGKVGEKSAEISAKDTLGKA
                     VKLADDNTSLKVLVFFQNGCPSCLKELPSLDEFIQNHPNKISVYAINSIDNANVVKVL
                     AEQFDFKNVKVLKDDLKITNDRYAVFATPTTIIIKDGMIKDRILGEKPWEFFESKLIS
                     LL"
     gene            4618..5121
                     /gene="traF"
                     /locus_tag="RJ318_001126"
     CDS             4618..5121
                     /gene="traF"
                     /locus_tag="RJ318_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HDV7431002.1"
                     /translation="MGIFRIQAYFFALIIALFFVACDSGENFKALNSDKTYNFAYNGF
                     EKSLKLNDKAQNFALVFFTKDCGVCKEQIPILQNLAKNYDFNIFVVLGDANDANDAKA
                     WADEKGLSNLAMFYEKRAAKYLSSAIGEIYGVPVLSFFKEGKMDEKFIGLTPYSILEK
                     EIKKVKS"
     gene            complement(5131..5568)
                     /locus_tag="RJ318_001127"
     CDS             complement(5131..5568)
                     /locus_tag="RJ318_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HDV7431003.1"
                     /translation="MKKTILTILFLLTLTQAKEIQIYESPTCGCCDLWADYMKAKGYE
                     VSVHKTNDFLKIKEKMGIKDEYQSCHTGVIEGYAIEGHVPESAIAWLLENKPKDVIGI
                     SAPGMPQGSPGMEQGYSEKYPVILMKKDGSYELYGYFIGDKKL"
     gene            complement(5867..6283)
                     /locus_tag="RJ318_001128"
     CDS             complement(5867..6283)
                     /locus_tag="RJ318_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431004.1"
                     /translation="MKKLGLVLAVLVALNVSAFADLIVINKKDLVPVSASEMQNKYFQ
                     ESIKSTLTEPLFKKATFYEADIVAKVDPRTYNSTQAIIQKEYSDKSNYVYYKQVLILT
                     SDGKRARLSTLSCEIASFDKKGYLCGGTADHNYSIK"
     gene            complement(6458..6542)
                     /locus_tag="RJ318_001129"
     tRNA            complement(6458..6542)
                     /locus_tag="RJ318_001129"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6506..6508),aa:Leu,seq:tag)
     gene            complement(6547..6623)
                     /locus_tag="RJ318_001130"
     tRNA            complement(6547..6623)
                     /locus_tag="RJ318_001130"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6587..6589),aa:Arg,seq:tct)
     gene            complement(6638..6714)
                     /locus_tag="RJ318_001131"
     tRNA            complement(6638..6714)
                     /locus_tag="RJ318_001131"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6678..6680),aa:Arg,seq:tcg)
     gene            complement(6718..6794)
                     /locus_tag="RJ318_001132"
     tRNA            complement(6718..6794)
                     /locus_tag="RJ318_001132"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6758..6760),aa:His,seq:gtg)
     gene            complement(6819..6896)
                     /locus_tag="RJ318_001133"
     tRNA            complement(6819..6896)
                     /locus_tag="RJ318_001133"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6859..6861),aa:Pro,seq:tgg)
     gene            complement(6939..7787)
                     /locus_tag="RJ318_001134"
     CDS             complement(6939..7787)
                     /locus_tag="RJ318_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HDV7431005.1"
                     /translation="MRFVFLICCACLVFANEILLLSKFDKQDFNSKDFNAYLMSEKLD
                     GVRGIWDGKYLKTRQNYKIKTPDFFTKNFPPFAIDGELWIARNKFDEISALIRSGDSN
                     LTLWKEVTYNIFDVPNACEEFQISTCTLKNRLAVLEEYLQKYPSAYIKIISQIPVENQ
                     NNLNQFYESIIKNQGEGIVIRKNLSPYEKGRSKNATKLKPYDDAECELVGFRKGKGKF
                     ENQVGALLCKMPNGQIIKIGSGLKDEDRKNPPKIGSIVTYKFNGLTKNSLPRFPVFLR
                     IRDENP"
     gene            complement(7787..8449)
                     /gene="cgpA"
                     /locus_tag="RJ318_001135"
     CDS             complement(7787..8449)
                     /gene="cgpA"
                     /locus_tag="RJ318_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoprotein CgpA"
                     /protein_id="HDV7431006.1"
                     /translation="MKTRILAIFFIFTSLLYADENPFKTDQNITLVAPPEFQKEEVKF
                     NSSARILKSITFNYINLDGSEDKIDLDVNKSIDWHDTYTISRFKSPDPSKVLDVSVTI
                     PEKNSSKQESNSTANVEIPLQVAKIYDFISYAVYKNKIKLNTSDEMITDFSVGNPSKI
                     VIDFRSKMISPTKNIRLSNSIFKRIDFGSHKGYYRLVIYLDGTYNYNIQKDATGYMIN
                     LL"
     gene            complement(8439..8642)
                     /locus_tag="RJ318_001136"
     CDS             complement(8439..8642)
                     /locus_tag="RJ318_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431007.1"
                     /translation="MIFWAFLVVIGAIYFGNMFFGQYSLDTLLSLENTKEELNKKIIL
                     LKEQNAKAQKDYFELKGLYPNEN"
     gene            complement(8708..9952)
                     /gene="eno"
                     /locus_tag="RJ318_001137"
     CDS             complement(8708..9952)
                     /gene="eno"
                     /locus_tag="RJ318_001137"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDV7431008.1"
                     /translation="MLVIEDVRAYEVLDSRGNPTVKAEVTLSDGSVGAAIVPSGASTG
                     SKEALELRDNDERFGGKGVLKAVANVNETIADEILGLDAFNQTQLDDTLRELDGTNNY
                     SNLGANATLGVSMATARAAAAALGMPLYRYLGGANASILPVPMCNIINGGAHANNNVD
                     FQEFMIMPFGFTSFKEALRSVCEIYAILKKELANSGHSTALGDEGGFAPNLANNTEPI
                     DLLMTCIKKAGYENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYPI
                     CSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPN
                     QIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAFIADFAVALNTGQIKTGALARGER
                     TAKYNRLLEIEFESDEYLGEKL"
     gene            complement(9952..10983)
                     /gene="recA"
                     /locus_tag="RJ318_001138"
     CDS             complement(9952..10983)
                     /gene="recA"
                     /locus_tag="RJ318_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDV7431009.1"
                     /translation="MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSV
                     GLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKY
                     AKNLGVNTDDLYVSQPDFGEQALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGD
                     QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGYGTPETTTGGNALKFY
                     ASVRLDVRKVATLKQNEEPIGNRVKVKVVKNKVAPPFRQAEFDVMFGEGLSREGELID
                     YGVKLDIVDKSGAWFSYKDKKLGQGRENSKAFLKENPEIADEITKAIQNSMGIEGMIS
                     GSEDDEGEE"
     gene            11089..11949
                     /locus_tag="RJ318_001139"
     CDS             11089..11949
                     /locus_tag="RJ318_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis family protein"
                     /protein_id="HDV7431010.1"
                     /translation="MKKITIAHSPDADDIFMYMAIKFGWIGNDFAYENTALDIQTLNE
                     FALKNEFDATAISFGLYPLIASEYALLRTAVSFGEGYGPKLIKKKDTHLKRNFKVALS
                     GANTTNALIFRMKYPEARIIYKNFLDIENAVLSGEVDAGVLIHESILNFDQSLYVEAE
                     LWDIWLEFAKENLPLPLGGMALRRSLPLSDAIKIERDLTNAVKIADANRKILAPMLME
                     RKLIRVDEEKLDTYLNLYANKNSISMNQTQLLAVDTLFKLGYDYKFYDKIIHVNDFLI
                     PSEYEEARNS"
     gene            11961..12230
                     /gene="fliQ"
                     /locus_tag="RJ318_001140"
     CDS             11961..12230
                     /gene="fliQ"
                     /locus_tag="RJ318_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HDV7431011.1"
                     /translation="MDESTLVALGVQTFKITLLLSLPMLLAGLIAGLVISIFQATTQI
                     NEMTLSFVPKIILVVVILIFLMPWMTTTMIDFTENILNQIPTFIK"
     gene            12227..13003
                     /locus_tag="RJ318_001141"
     CDS             12227..13003
                     /locus_tag="RJ318_001141"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDV7431012.1"
                     /translation="MIIDFKKYSSVRIGNEFEVLVLDQICDFDGFLIGGANNLLVSPK
                     PKNIGILGDGFNFIQILDRNKDFIHLRIGCKTKSSKMYRFAKENNLKGFEYLSKIPGT
                     LGGLLKMNAGLKGECISQNLIKIATSQGEILRANINFDYRFCPLNTHFFWAEFKLNFG
                     FDTLKDEALKNARSNQPSGASFGSIFKNPKNDFAGRLIEAVGLKGFSKGDAMLSDKHA
                     NFLINKKNASFEDAFFLIELARKKVFEEFGTNLENEVIII"
BASE COUNT         4358 a         2189 c         2019 g         4498 t
ORIGIN      
        1 attgggaatt ttaagttttt gcaccgcttt gcattattat tttttaagtc aagatttccc
       61 tatttttact agctctttaa tcgatagcga aggtataagt tctttaggtt ttattgcttt
      121 agccttgctt gtttgtattt tgattttctt ctttttaaaa tggcaaaaaa attttaatca
      181 aaaaacaagc tttatgctgt ttttactgct tatccttata gaaagcgata aagctctagc
      241 caatatcttg cttactttaa tgcgaaattc catcatagaa actcatgctt ttttggtgag
      301 ttttgtagga aaaagtaatt attttggtgt ttttggaatt tatgtttatt taattttcat
      361 cactttttta gcattcttaa gcttaaaaat tcgcaaaaaa aatataagca aaaaacaaat
      421 tttagatata aattatcgca aaaacgaagc taaaacaagt cttattaatc gctatttttc
      481 cagtgttttt atctcctgtg ttgtaagttt ttgcattgtt ttatactttt ttatggtaag
      541 ctctaagcct ttaaccatag atgagcctaa agaaatttta cccgataaga atggcaaatt
      601 tatctttgat atagctcttt taagggacaa caaactccac cgctttgctt atatcagtgc
      661 tgaaggcaaa gtgataaggt tttttcttat caacaaaaga gaagataagg attctcctgt
      721 agctgttttt gatgcttgta tgatttgtgg agatatgggc tatatcaaaa aagatggaca
      781 actcatttgc atttcttgca atgtgcgtat tttcttgcca agtgtaggta aaagcggggg
      841 ttgcaatcct atcccactca aatacgaata cgatggtaaa aaaatcacca tagatgttaa
      901 agatgtaata gcaggatcta attattttag tcaaatcaaa gaaattgaag tgcaagatcc
      961 tgtatcaaaa acaaaggtta taaacaccca agctcctttt tcttatagct ataaaggggt
     1021 tacttattat ttttcaaatc aaaacaacta tgaagaattt aaaaaagatc ctacaaaata
     1081 tgtagaagaa aacgaagccc aatttttaat ccaaaggaga aatgatgttg gctaaaatga
     1141 tttttaactc tatatttaaa aacaaaattc aaaaattttt agcctttctt acttgttttt
     1201 tagccacgct tttgctctct actatgctaa atattaccct aagtataggt gatgaagtaa
     1261 ctaaacaact caaaagctat ggctctaata tccttgtttt acccaaaggc tcaagcctta
     1321 gtatagaaat aggtaatgaa ctttatgaac ccttaaaaaa caaaaactac ctagaagaaa
     1381 aaaatttata tatgattaaa gacatttatt ggcgtaacaa catcaccgca cttgctcctt
     1441 ttttggaagg taaaatcaca attgaaaact cccagcaaaa agcacttatt tatggtgctt
     1501 attttcaaaa agccataaaa attaaagatg atgatgattt tatcacaggt ataaaaagtc
     1561 tttatcctta tttagcagtg caaggagaat gggcaaaaga tgatagcaat gaaatcatgc
     1621 taggcgaaga ctttgctaaa aacaataaac taaaattagg agatactatc aaactcatag
     1681 gagaaaacaa tcaaagcaaa gaagcaaaaa tcgtaggcat tttacttcat gccaatccta
     1741 aaatgtcaaa taaaatcatc gctcctttaa atttagctca agatttactc aacaaacaag
     1801 ggctttactc aagtacagaa gtaagagctt ttaccatacc tgaatcagcc ctttctgaaa
     1861 aagtacgtcg catgggcgaa gaaaaattag atcagttaga atatgacaaa tggtattgct
     1921 cagcttatgt aggctcaatc gctagtcaaa ttagcgatgg cttgccaggt gctgatgcaa
     1981 aagctctaaa tgctataagc gatgctcaaa gcttggtggt taaaaagatc caatccttaa
     2041 tgggcattac ttgcattatt tgtcttattg ttgcaagtat tgcgatttca agtctaatga
     2101 gttctgaaat tcatcgtaga aaaaaagaaa taggactttt aaaagtactt ggtgctaata
     2161 cttttcaaat ttatctcatc tttgctagtg aaaatttaat cgtagcttta tttgctgctt
     2221 tacttggatt tatttttggc acagcacttt ctcaaatcat cagtcttagt atttttggat
     2281 attttattga tatagccttt gtagctttac ctttaagctt tatttttgca ggacttattg
     2341 ccttacttgg ttgcttgctt cctatcaaaa atatcacaca actttcagct gcaggagtgc
     2401 tttatggtag ataagttttt cctcaatgag ctttttaaaa gcattagctt ttcttatcaa
     2461 agacttttta ttatagtttt aagtgttttt ataggagcac ttacttgctc agctttttta
     2521 aatatttatt ttgatatcga catcaaactt tctaaagaat taaaagctta tggagcaaat
     2581 gtaatgataa gtcccaagca ggatgaaaat tttatctcca atactgagta tgaaaaaata
     2641 aaagaaaatt taaaggctag agctttaact ccttttttgt atgatttttt aaatttaggc
     2701 agtacaagcg gggtggtttt aggcactgat tttagggctt taaaaatcac taaacctttt
     2761 ttagaagtta aagaaggaag cttttctcta aatgattttg atgaaaattc agccttttta
     2821 ggagttaatt tagccaagca actaggccta aaagcaggca atgaacttca aatttataat
     2881 ccaaacaacg gaaaaagcat aaaacttacc ataaaaggca tactttcaag caatgatgaa
     2941 tttgatagca ttgttttagc ccctttaagc gtggtgcaaa atttaagcga tagagccggt
     3001 attaactatg ctaatgctgt agtttatgga aattttgatg aagttaaagc caaaacacaa
     3061 gcaatcagca atgaattcat cgatgcaaaa cctatatctt cagtatcctt aagtgaaggt
     3121 ttagtgcttg gaaaaatcaa agctttaatg tttttaatca tacttgtggt attgatcata
     3181 gttactacta gcgttaatac aactttaagt tctattatat tttctcgcaa aaaagaaatc
     3241 gcactgcgtt tagccttggg tgcgaaaaaa agtgaaattt ttaaactttt tgctagtgaa
     3301 tgctttatag taagtttttt tgctagttta atcggagctt tttgtgggat atttttagcc
     3361 aatgtctttg gttatttaat ttttaattct agtattgatt ttagatttat agctgttttt
     3421 atagccttaa tcatttcttt gatttttgcc tttttggctg cattttttcc tataaaaaga
     3481 gcattaaaaa tcaatgtgtg tgaaaatttg aaaggtgaat gatgaaaaaa gaacttatta
     3541 aaataaacaa tttaaataaa gaatttggca aagttaaagc cttaaacaat atcaacttaa
     3601 gcgtctatga aggagaatgg cttgccatca tgggtccatc aggaagtgga aaatcaacac
     3661 ttttaaacat actatcgctc atggatactc caagctctgg agagtatatc ttggataatg
     3721 aaaacctaga gcaaatggat gaagagcaaa aaatcacctt gcgtcgtgaa aaaatagggc
     3781 ttgtctttca acaatttcat cttatcccct atcttaacgc cttagaaaat gttatgctct
     3841 ctcagtatta tcactcaagt gtagatgaag aagatgccaa aatggttctt gaaaaagtag
     3901 gactttcgca tagactcact catttaccta gccaattaag tggcggagaa caacaaagag
     3961 tttgtatagc aagagcttta atcaacaacc cagagctttt actcgcagat gaacccacag
     4021 gaaatttaga tgaagccaat gaacaaatcg ttcttcaaac cttgcaaaaa ttaaaaaatg
     4081 aaggtaaaac catagtttta atcacacaca atcctgattt agccaaattc gcagatcgaa
     4141 cccttatctt acaacatggg gtgttaaaat gaaaaaaagc cttttaatct taagcatttt
     4201 gtttttactc aatgcttgtt cttttgaaaa ttcaaaagat actggaaaag ttggagaaaa
     4261 aagcgctgaa atttcagcta aagatacttt aggaaaagct gtaaaacttg ctgatgataa
     4321 tacaagttta aaagtcttag tcttttttca aaatggctgc ccttcttgct taaaagaact
     4381 cccttcttta gatgaattca tacaaaatca ccccaataaa atcagtgttt atgctataaa
     4441 ttccatcgat aatgccaatg tggttaaggt tttagccgaa caatttgact ttaaaaatgt
     4501 aaaagtttta aaagacgatc ttaaaatcac caatgatcgt tacgctgtgt ttgcaacccc
     4561 tactaccatc atcattaaag atgggatgat aaaagataga attttaggag aaaaaccatg
     4621 ggaatttttc gaatccaagc ttatttcttt gctttaatca tagctttatt ttttgtagct
     4681 tgtgatagtg gagaaaattt taaagcttta aatagcgata aaacctataa ttttgcctac
     4741 aatggttttg aaaaaagcct aaaactaaat gataaagcac aaaattttgc cttagtattt
     4801 ttcacaaaag attgcggagt ttgcaaagaa caaattccta ttttacagaa tttggctaaa
     4861 aattatgatt ttaatatctt tgtggtttta ggcgatgcaa acgatgcaaa cgatgcaaaa
     4921 gcttgggctg atgaaaaagg tttatctaat ttagcaatgt tttatgaaaa aagagcagct
     4981 aaataccttt caagtgccat tggggaaata tatggagtac ctgtgcttag ttttttcaaa
     5041 gaaggaaaaa tggatgaaaa attcataggc ttaactcctt atagcatact tgaaaaagaa
     5101 atcaaaaaag taaaaagcta aaaatttact ttaaagcttt ttatccccta taaaatatcc
     5161 ataaagctca tagcttccat cttttttcat caaaattaca ggatattttt cactataacc
     5221 ttgttccatt cctggacttc cttgcggcat gccaggagct gaaattccta taacatcttt
     5281 aggtttgttt tcaagcaacc atgctatagc actttcagga acatgccctt caatagcata
     5341 gccttcaatc acacctgtat ggcaactttg atactcatct tttataccca ttttttcttt
     5401 gattttaaga aaatcattgg ttttatgaac actaacctca taacccttag ctttcatata
     5461 atcagcccaa agatcacaac agccacaagt aggactttca taaatttgta tttccttagc
     5521 ctgcgtaaga gtgagtaaaa aaagaatggt taaaattgtt tttttcataa ttgctatcct
     5581 aagtaaaaaa tatataataa tacttttata aagttaatat catcacattt ttaacactaa
     5641 aaatgaattt acaaaaattt aatcaagaaa agacttttaa tgagtgttga ttttgtcttt
     5701 gcagcaaaga tataaaagat aaaacgattt aaaaaactag aaatttttaa cttaaaaagc
     5761 ttaaaattta gatatatttt atacttacta tgttttttca tagtatgttc taatggtgga
     5821 tttccgccaa gagtgaaaac tcaaggcgga tttttatttg caatatttac ttaatagaat
     5881 aattatgatc agctgtgcct ccacataaat accccttctt atcaaaactt gcaatttcgc
     5941 aagaaagagt agataatcta gctcttttac catcactagt taatataaga acttgtttat
     6001 aataaacata attgctttta tctgaatatt ctttttgtat tatagcttga gttgaattat
     6061 aagttcttgg atcaactttt gcaacaatat ctgcttcata aaaagttgcc tttttaaaaa
     6121 gtggctcagt taaagttgat tttatactct cttggaaata tttgttttgc atttcgcttg
     6181 ctgaaactgg aactaaatct tttttattga taactatcaa atctgcaaat gctgacacat
     6241 ttaaagcaac taaaactgct aaaactaaac ctaatttttt cattttatct ccttgaattg
     6301 aattttgtat atttgaatta tttttcaaat cttttgcaag ataattttta aatttatcta
     6361 aattaaattt gcattttatc taacaatcat aagaaatttt aaaatgaaat aaaaatttat
     6421 gagaaatcaa ctcttatttg aaaatgataa aagtaagtgg tgcggatgaa aggacttgaa
     6481 ccttcacgca ttgctgcacc agatcctaag tctggcgtgt ctgccaattt caccacatcc
     6541 gcaaagtggt acgcccaaga ggattcgaac ctctgaccta cggcttagaa ggccgttgct
     6601 ctatccagct gagctatgaa cgcatataaa atcttggtgg tgcgcccgat aggaatcgaa
     6661 cccataacct acagatccga agtctgtcgc tctatccagt tgagctacga gcgctagtgg
     6721 ggtgagtgat gggaattgaa cccacgaccc tcaggaccac aatctgatgc tctaaccgac
     6781 tgagctacac tcaccatttt gtataaattt ataaaaaatg gtcggggtga aaggattcga
     6841 accttcggcc ccttggtccc aaaccaagtg cgctaaccag actgcgctac accccgaata
     6901 aataaaagga aatattttat cacaaaataa ttttaaagtc aaggattttc atctcttatt
     6961 cttaaaaaca ccggaaagcg aggtaaggaa tttttggtca atccattaaa tttataagtc
     7021 acaatactac caatttttgg aggatttttt ctatcttcat cttttaaacc actgcctatt
     7081 ttaatgattt gtccattagg cattttacaa agtaaggcac ctacttgatt ttcaaattta
     7141 cccttgccct tgcgaaatcc taccaactca cattctgcat catcataggg ttttaatttc
     7201 gtggcatttt tacttctgcc tttttcataa ggacttaaat ttttgcgtat aacaatacct
     7261 tcaccttgat tttttataat gctttcgtaa aattgattta aattattttg attttcaact
     7321 ggaatttgag aaataatttt tatataggca ctaggatatt tttgcaaata ctcttctaaa
     7381 acagccaaac gatttttaag agtgcaagta gaaatttgaa attcttcgca agcatttggt
     7441 acatcaaaaa tattataagt tacttccttc cataaggtca aattgctatc gccactacga
     7501 attaaagctg aaatttcatc aaatttattt cttgctatcc aaagctcacc atcaatagca
     7561 aaaggaggga aattttttgt aaaaaagtca ggagttttta ttttgtagtt ttggcgagtt
     7621 tttagatatt tcccatccca aattccacgc actccatcaa gtttttcgct catcaaataa
     7681 gcattaaaat ctttagagtt aaaatcttgc ttatcgaatt tgctaagaag taaaatttca
     7741 ttagcaaaaa ctaaacaagc acaacatatt aaaaaaacaa acctcatcaa agcagattaa
     7801 tcatatatcc agttgcatct ttttgaatat tataattata agttccatca agatatatta
     7861 caagtcgata atatccttta tgagatccaa agtctatgcg tttaaaaata gaattgctaa
     7921 ggcgtatgtt ttttgtaggg ctaatcattt tagatctaaa atctataacg attttacttg
     7981 gatttcctac tgaaaaatct gtaatcattt catcactagt gttaagtttt attttatttt
     8041 tataaaccgc ataagaaata aaatcataaa tctttgcaac ctgtaaaggt atttcaacat
     8101 tggctgttga gtttgattct tgtttagagc tatttttttc aggtatagta actgaaacat
     8161 caagtacttt tgaaggatca gggcttttaa atcttgatat agtataagta tcgtgccaat
     8221 caatactttt attgacatct aaatcgatct tatcttcact tccgtctaaa ttgatataat
     8281 taaaagtgat gctttttaaa attcttgcac tagaattaaa tttaacttcc tctttttgaa
     8341 attcaggtgg agcaaccaag gttatatttt gatctgtctt gaaaggattt tcatcagcat
     8401 ataaaagaga ggtaaaaata aaaaatattg ccaaaattct agttttcatt tgggtataat
     8461 ccttttaatt caaaataatc tttttgtgct ttagcatttt gttctttgag caaaataatc
     8521 tttttattaa gctcttcttt ggtattttct aagcttaata aagtatctaa agaatactgc
     8581 ccaaaaaaca tattgccaaa ataaatcgct ccaattacaa caagaaaagc ccaaaaaatc
     8641 atttttataa catgggtata aaaacttttt tttcttgtgc tttcgtcgta ttctttaagt
     8701 aaatcgctca gagcttttct cctaaatatt catcgctttc aaattcaatt tcaagtaagc
     8761 gattgtattt tgcggttctt tcgcctcttg ctagggctcc tgttttaatt tgtcctgtat
     8821 ttaaagccac agcaaaatcc gctataaaag catcttcact ttcgccgctt ctatgactca
     8881 tcacacattt atagttattt ctttgcgcta aacgcacagt tctcatagtt tgggtaatag
     8941 ttccgatttg atttggtttg ataagtacag catttgccat ttttttgatg ataccttctc
     9001 ttaaaatatc ttcattggtc acaaacaaat catcgcctac aagctgaatt ttattgccta
     9061 atttttcagt cagcttgatc cagccttcaa agtcattttc agctaagcca tcttcgatac
     9121 tgcaaattgg atattttgca caaagttcta catagcgttc gatcaaagcc tcgcttgaaa
     9181 aagccttgcc ttccatgtgg tatttaccat ctttgaaaaa ttctgtactt gccacatcaa
     9241 gagcaatttt tacacgattt tcataacctg cttttttgat acaagtcatt aaaagatcga
     9301 taggttctgt gttgttagct aaatttggag caaaaccgcc ttcatcacct aaagccgtag
     9361 aatgtccaga atttgcgagt tcttttttta atatcgcata aatttcacaa actgaacgca
     9421 aagcttcttt aaagctagta aaaccaaaag gcatgatcat aaattcttga aaatctacat
     9481 tgttgtttgc atgagcaccg ccatttatga tattacacat tggcacgggt aaaatgctcg
     9541 catttgcacc acctaagtag cgatataaag gcattcccaa agcagctgca gccgcacgag
     9601 ctgttgccat agatacgcct aaagtcgcat ttgcacctaa atttgagtaa ttatttgttc
     9661 catcgagctc acgcaaagta tcatcaagtt gagtttgatt aaaagcatct agtcctaaaa
     9721 tttcatctgc aatggtctca ttgacatttg caacagcttt taaaacgcct tttccgccaa
     9781 atctttcatc attatcacgc aattctaagg cttcttttga acctgtactt gcaccacttg
     9841 gaactatggc cgcacctaca cttccatcgc ttagcgtaac ttcggctttt acggttggat
     9901 ttcctctact atcaagaact tcataggctc taacatcttc aattactaac attattcttc
     9961 tccttcgtca tcttcgctac cgctgatcat accttctatt cccatagaat tttgaattgc
    10021 ttttgtgatt tcatctgcaa tttcagggtt ttcttttaag aaagcttttg aattttctct
    10081 accttgtcca agttttttat ctttataaga aaaccacgca ccacttttat ctacgatatc
    10141 aagttttaca ccataatcga tcaattcacc ttcacggctt aaaccctctc caaacatcac
    10201 atcaaattca gcttgtctga atggaggagc aactttattt ttaactactt ttactttaac
    10261 gcggtttcct ataggttctt cgttttgttt taaggttgct acttttctaa catctaaacg
    10321 cacagaagca taaaatttta atgcatttcc acctgttgtg gtttcaggag taccataacc
    10381 catagcaccg attttcatac gaatttggtt gataaaaatt actgtggtat tcattttatg
    10441 aactatacct gtaagttttc ttagagcttg agacataagt cttgcttgaa gtcctacatg
    10501 ttgatcgccc atatcgcctt caatttctgc ttttggagta agtgctgcaa cgctatctac
    10561 tacgataaga tctactgcgc cacttcttgc tatagtttct acaatttcta aggcttgttc
    10621 tccaaaatca ggctgagaaa catacaaatc atctgtattt acacccaaat ttttagcata
    10681 ttttacatca agcgcatgtt ctgcatcgat aaaagcacaa actccacctg ctttttggca
    10741 ttctgcgata atatgtaaag ttagagtggt tttacctgaa ctttcaggtc cataaatttc
    10801 tataattctt ccttttggaa caccgcctat acctaaagca agatcaagcc caactgaacc
    10861 tgtgcctatg ctatcgattt gctcgacttc tttatcccct agtcttaaaa tagtaccttt
    10921 tccaaaggtt ttatctaaac tttttagggc agcgtctaga gattttcttt tattatcatc
    10981 cataactttc cttaaaaatt ctaaattttt agttagaatt ctaacaaaat aaaattaaat
    11041 aatgatttat tttgctagaa ttaaagcaaa gatttaaagg aagcatagat gaaaaaaatt
    11101 actattgcac attctcctga tgctgatgat atttttatgt atatggcaat taaatttggg
    11161 tggataggga atgattttgc ttatgaaaat acagctttag atatacaaac tttaaatgaa
    11221 tttgccttga aaaatgaatt tgatgctacg gctatttctt ttgggcttta tcctttaatc
    11281 gcttctgagt atgcactttt acgcacagca gtgagttttg gtgaaggtta tgggccaaaa
    11341 ctcatcaaga aaaaagacac gcatttaaaa agaaatttta aagtcgcttt gagtggagca
    11401 aataccacca atgctttgat ttttcgcatg aaatatcctg aagcaagaat tatttataag
    11461 aattttttag acattgaaaa tgcggtttta agtggcgaag tagatgcggg ggttttgatc
    11521 catgaaagca ttttaaattt tgatcaaagt ctttacgtgg aagcagaact ttgggatata
    11581 tggcttgaat ttgctaaaga aaatttgcct ttgcctttag gtggaatggc tttgcgtcgt
    11641 tctttacctt taagcgacgc gattaagatc gaaagagatt taaccaatgc tgtaaaaatt
    11701 gccgatgcaa atcgtaaaat tttagcccct atgcttatgg aaagaaaact tatccgtgtt
    11761 gatgaagaaa aacttgatac ttatcttaat ttatatgcca ataaaaactc tattagcatg
    11821 aatcaaactc aacttttagc tgtagatacg ctttttaaac taggatatga ttataaattt
    11881 tatgataaaa tcatacatgt aaatgatttt cttatcccta gcgaatacga agaagctaga
    11941 aattcttaaa aaggataaaa atggatgaaa gtaccttagt tgctcttgga gtgcaaacct
    12001 ttaaaatcac acttttactt tccttgccta tgcttttagc aggacttatt gcagggcttg
    12061 tgatcagtat ttttcaagca actacacaga ttaacgaaat gacactttct tttgttccta
    12121 aaatcatctt ggttgtagtt attttaatct ttttaatgcc ttggatgact acaactatga
    12181 ttgattttac tgagaatata ctaaatcaaa ttccaacttt tatcaaatga tcattgattt
    12241 taaaaaatac tcttctgtgc gtataggaaa tgaatttgaa gttttagttt tggatcaaat
    12301 ttgtgatttt gatggttttt taataggtgg tgcaaacaac cttttagtta gtccaaaacc
    12361 taaaaatata ggaattttag gagatggttt taattttata caaattttag atcggaataa
    12421 agattttata catcttcgca taggctgcaa aacaaaatca agtaaaatgt atcgctttgc
    12481 caaagaaaac aatcttaagg gttttgagta tttaagcaaa attcctggta cacttggcgg
    12541 gcttttgaaa atgaatgcgg gacttaaagg agagtgtatc agtcaaaatt taatcaaaat
    12601 tgctacttct caaggcgaaa ttctaagagc aaatataaat tttgattatc gtttttgtcc
    12661 tttaaatacg catttttttt gggctgaatt taaactaaac tttggctttg atacccttaa
    12721 agatgaagct ttaaaaaatg caagaagcaa ccaacctagt ggagcaagct ttggctctat
    12781 ctttaaaaat ccgaaaaacg actttgcagg acgtttaatc gaagctgtag gacttaaagg
    12841 atttagcaag ggagatgcta tgttaagcga taaacacgca aattttttaa ttaataaaaa
    12901 aaatgcaagt tttgaagatg cgttttttct tatcgaattg gctagaaaaa aagtctttga
    12961 agaatttggc acaaacttag aaaatgaagt gattataatc taaacacaca aaacaataaa
    13021 agtctaaaaa atttactctt aatctaactt taaataaaat acaa
//
LOCUS       DAPIYB010000050        12764 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.051, whole genome shotgun sequence.
ACCESSION   DAPIYB010000050 DAPIYB010000000
VERSION     DAPIYB010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12764
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.051"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            127..912
                     /locus_tag="RJ318_001142"
     CDS             127..912
                     /locus_tag="RJ318_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDV7431013.1"
                     /translation="MEITDLPYLIIGIISGIASGLFGIGGGMIIVPSMFALGASAHHA
                     IGISVLQMIFAAVFGSYINYKKKNLNLKDGIMIGFGGLIGASFSGMLLKALSDVALTS
                     VFLAVSCIFFIKYAFGIKENIVQNQRSVWVKNVILFIAGAFTGIFAISLGIGGGLLIA
                     PILAYFLGYDSKKVVSLSLFFVIFASVSGIISFSNSGVIDSEVIHKGILVGIASMVGV
                     FIGIKIIEKMHISAHRKILLCVYALSILGTTHSLLNKLNFINF"
     gene            985..3810
                     /gene="uvrA"
                     /locus_tag="RJ318_001143"
     CDS             985..3810
                     /gene="uvrA"
                     /locus_tag="RJ318_001143"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDV7431014.1"
                     /translation="MNDTIKIIGARENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFG
                     TLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTI
                     TEIYDYLRLLYARVGIQHCHRCGQKISSMSVSDIVSEILKFPKGAKIIIYSPLIREKK
                     GTYADLLENLRNKGYVRAQIDGVLVRLDEEIELAKTKKHTIKLVIDRLEIQEDLLSRL
                     ASDIEKGLQESFGEIEIEVLNHEEINLNKHYHFSEHSACFDCKISFVPLEPLSFSFNS
                     PKGACEACDGLGIRYTLDMKKIIDENLSLENGAVKIMYGFNKSYYYKFLIAFCEQNEI
                     PIKIPFMQLNEVQKRLVLYGNAKTIEFLWKRNRLKRTFEGVVKMAYEMLKDEKDLAEY
                     MSEKICKDCGGHRLKPESLAVKVAKKSLGEILDMSIEDSTAFFADEKNFSYLSEQQKL
                     ISKPILKEINERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYVL
                     DEPSIGLHERDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKAGKFGGE
                     VVFSGTYKELLKSKSETALYMNGKKQISQLQNRTQKEWLELKNVNINNIQDLSVKFPL
                     QNLVAITGVSGSGKSSLILQTLLPFAQEELNRAKKVKKLGGVQIEGLEKLDKVIYLDQ
                     SPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKAGRFSFNVKGGRCEKCSGDGE
                     IKIEMHFLPDVMVVCDTCGGKRYNDATLEIKYKGKNISEILNMSVLEASEFFTAVPKI
                     KQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLH
                     FEDVNKLILVLQHLVDLKNSVFVIEHNLDVIKNADYIIDMGPEGGVKGGKVISTGSVE
                     KVAKEHKKTRSYTGYYLDLELKNTQKS"
     gene            3815..4258
                     /locus_tag="RJ318_001144"
     CDS             3815..4258
                     /locus_tag="RJ318_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV7431015.1"
                     /translation="MFDFLYNDISYLGLFMVCFLSSTLLPLASEAFVLGFIKLDFNPN
                     LVLIVATLGNTLGSLSTYALAYFGKEKILEKYFSKSLKKLENFNANFAKFGSIFAFFT
                     FLPLVGDLFALGLGFAKYSFLKTIFFILLGKLSRYTFIIFIANSF"
     gene            complement(4214..5221)
                     /locus_tag="RJ318_001145"
     CDS             complement(4214..5221)
                     /locus_tag="RJ318_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HDV7431016.1"
                     /translation="MRLILDTDIGNAIAGANTDDGLALALILSSKEIKLEMLSTVCGN
                     VPSLVAYSVAKDLFQRLNLNIPVYLGANEALKEPSKAWRQRLDESVKNFKLEYLWENI
                     KSPEILENINPDAIFKMGELVSKNPKEISICAIGPLTNIAMTMKIFKDFDINLKELFI
                     MGGSFDMPYYTKDTNFGFDPEAASIVLNSRAKITLIPYNATMQTLLTHEDLKELQGKN
                     ILCDFIVETLGVWIDYASKTRGTKGTWIHDALTIACALDSSIADFDECYADVICDSSL
                     ARGMSWRCFREPKMSMGVDLSTKNCVKILKNVDNARLLKLIKERLLKGVCYENYESIT
                     T"
     gene            complement(5218..6579)
                     /locus_tag="RJ318_001146"
     CDS             complement(5218..6579)
                     /locus_tag="RJ318_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HDV7431017.1"
                     /translation="MTNQQIDGIADKNFNTPEGRKVFKKAVFSCWLGTAMEYADFALY
                     GLAAATIFSEVFFPEQTPVIALLLSFVTYGIGFIARPIGALFFGHLGDKHGRKNVMMA
                     TIALMGISTTLIGFIPSYAVIGVWAPICLVALRFMQGFGAGAELSGGTVMLGEYAPSK
                     RRGLVSSVIALGSNSGTLLASFVWLLMVQMDEASFKEWGWRVPFMGSILIALFAVYIR
                     FHVKETPVFEKQKNEMMKLRLNNEKHMKKDERSFWQRSRAFWTMVGLRIGENGPSYLA
                     QGFIVGYVTKILLLDKSVATTAVMIASLVGFLVIPLAGYLSDKFGRCITYRMFCLLLM
                     IYAFPAFMLLDSKNEIIVILTIIVGMSLASLGIFGVQAAWGVELFGVKNRYTKMAFAK
                     ELGSILSGGTAPMVASALLAYYGSWWPIATYFVLTAGIGFVTTFFAPETRGRDLNKIE
                     DAI"
     gene            6743..9382
                     /gene="polA"
                     /locus_tag="RJ318_001147"
     CDS             6743..9382
                     /gene="polA"
                     /locus_tag="RJ318_001147"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDV7431018.1"
                     /translation="MKTLTIVDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSL
                     KNEYKSDYIVFALDSKGKTFRSEIDPNYKQNRTPPPPELLEQIPICIKMIEKMGFISV
                     SQEGYEADDIIASFVKTCENRDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAA
                     CLEKYGVKPNQIRDFLALCGDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVR
                     NERSRNLLLEGKENAFLSKKLASLYDNLEVQNLIEKATYPDEEPLLKILEILEHYELN
                     TLLKKLRQNPDNKDKNLGFKATLVQDENKLFEILNTLDKESIIAFDTETTGLDTKEAK
                     IVGFSFCMNENEAFYVPLTHNYLGVGEQISLQSAKKAIEVIFNHFVIGHNLKYDFKII
                     QNNFDLNLPQKYADTMILAWLKNPSLRVNMDDLALRLFNYETLHFESLVKKGENFASV
                     ELEKACKYAAEDAYITLRFYLYFLKNLETPLLELAKNCEFDFIKIIMMMEENGIKLDT
                     NALEILMKKFENEIKNLSEEIYTLCEDRFNLNSPKQMGDILFEKLKLPSGKKGKTGYS
                     TDEKVLNILLDKHPVIAKILDYRELAKLYSTYCEPLLKLALKDKNSRIYSSFLQTGTA
                     TGRLSSKDPNLQNIPAHGQYAKDYKSCFVAKDGFSFISLDYSQIELRILAHFSEDEKL
                     LNAFANDEDIHARTAIMIFGESNYETRSVAKSINFGLIYGMGYKTLSQNLKIEANLAK
                     SYIEKYFENFTSIKKYFEKVKNEAKQNGFIVTLSGRKRYFDFENAKPMQIAMYERESI
                     NSILQGSAADVIKLAMLEINKELNEDKKLILQIHDELIFEVKDDLCENFVKKTRDIME
                     NIVKLKVKLKTSSSIAKNWGDLK"
     gene            9398..10174
                     /gene="motA"
                     /locus_tag="RJ318_001148"
     CDS             9398..10174
                     /gene="motA"
                     /locus_tag="RJ318_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HDV7431019.1"
                     /translation="MDLSTILGMVLAVTSISVGDILEGGNPLHVVHLSSFLIVMPTAA
                     FCAMTSTHKKIVKAAYKELKVVFKGSGVNLPERIAQLIEFAIIARRDGLLALESRTSE
                     IENEFLKNAMMMLVDGKSFEEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVG
                     AVFGLILALKLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGKKLKANGMDLVKEQ
                     IVITEAIKGIAEGANPRDLEAKLFNFLSHDDPRISQFDKG"
     gene            10177..10920
                     /gene="motB"
                     /locus_tag="RJ318_001149"
     CDS             10177..10920
                     /gene="motB"
                     /locus_tag="RJ318_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HDV7431020.1"
                     /translation="MAKKHKCPECPAGEKWAVPYADFLSLLLALFIALWAISKTNPAK
                     VEALKTEFVKIFDYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRL
                     QAALDQSDNQVALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGY
                     TDNSDSIIRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPINGNPQTLENNRV
                     EIYFKVDTADTSTQKSVLELINKIGTKAP"
     gene            complement(10926..12014)
                     /gene="flhB"
                     /locus_tag="RJ318_001150"
     CDS             complement(10926..12014)
                     /gene="flhB"
                     /locus_tag="RJ318_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HDV7431021.1"
                     /translation="MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTI
                     TLFMLSFMGERIVNLYRYYQSFIGVEFDLRIIQAIMIKSIFEVLIILAPIVLSIMIAG
                     VLGNIMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFI
                     VLLKFMQELPRVELYTMVAQLTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGL
                     RMSKQEIKDEYKQMEGDPQVKGRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIR
                     YDTSKEQAPRVVAKGVDFLALRIKQVAYENNVVVYENPPLARELYKACDVNDLIPREM
                     FKAVAEVLGFVYNTNNKSRLAGQVKKGN"
     gene            complement(12131..12727)
                     /locus_tag="RJ318_001151"
     CDS             complement(12131..12727)
                     /locus_tag="RJ318_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDV7431022.1"
                     /translation="MIVTKKALDFTAPAVLGNNEIVQDFNLYKNIGPKGAVVFFYPKD
                     FTFVCPSEIIAFDKRYQEFKNRGIEVIGISGDNEFSHFAWKNTPVNQGGIGQVKFPLV
                     ADLTKQIARNFDVLYAEAVALRGSFLLDADGTVRHAVVNDLPLGRNIDEMLRMVDTML
                     FTNEHGEVCPAGWNKGDEGMKANPKGVAEYLGKNEAKL"
BASE COUNT         4624 a         2106 c         2006 g         4028 t
ORIGIN      
        1 acatttttac gatgcttaaa gttaccaaaa aatattctat tgttataaaa aaactaagat
       61 aatacttagc ttaataagat aaaattattc cgtatttgaa atatttaata ttttttagga
      121 aaagctatgg aaatcacaga tttaccttat ctaatcatag gaatcatttc aggtattgct
      181 tctggacttt ttggcattgg tggaggtatg attatcgttc cttctatgtt cgcacttgga
      241 gcaagtgctc accatgctat cggaatttca gtattgcaaa tgatttttgc agcagttttt
      301 ggctcttata ttaattataa gaaaaaaaat ctaaatctta aagatggtat tatgataggt
      361 tttggagggc tcataggagc aagctttagc ggaatgcttt taaaagcttt aagtgatgta
      421 gctcttacta gcgtattttt ggcggtaagt tgtatatttt ttatcaaata tgcttttgga
      481 attaaagaaa acattgtgca aaatcaaaga agcgtttggg taaagaatgt cattttattt
      541 attgctggag cttttactgg tatttttgct atttctttgg gaattggtgg cggactttta
      601 attgctccga ttttagctta ttttttaggc tatgatagta aaaaagttgt ttccttatcc
      661 ttgttttttg ttatttttgc ttcagtctct ggtattatat ctttttcaaa ttctggagtt
      721 atagactctg aagttattca taaaggaata ctagtaggta tagcttctat ggttggagtt
      781 tttataggaa ttaaaatcat agaaaaaatg catatttcag ctcatagaaa aattttactt
      841 tgcgtatatg ccttatcaat acttggaacc acccactctt tgcttaataa gctaaatttt
      901 ataaattttt aacttggatt tatccaagtt cttttaatat tattatgcta aaatcttaaa
      961 tttatttaat gtttaggaaa gactatgaac gataccataa aaatcattgg cgcaagagaa
     1021 aataacctaa aaaatatcca ccttgaaatt cccaaaaaca aactcattgt ttttacagga
     1081 ctgagcggaa gtggaaaatc aacccttgct tttggaactc tttatgctga aggacaacgc
     1141 cgttatatag aaagtttaag tgcttacgcc agacaatttt tagataaggt aggcaaacct
     1201 gatgtcgata aaatcgaagg tttaactcca gccattgcca tagatcaaaa aactacttct
     1261 aaaaatccac gctctactgt aggaaccatc actgaaattt atgattatct aagactttta
     1321 tacgcaagag ttggcattca acattgtcat cgatgtggac aaaaaatttc atctatgagt
     1381 gtaagtgata tagtcagtga aattttaaaa tttccaaaag gtgcaaaaat catcatctac
     1441 tccccactca tacgagaaaa aaaaggaact tatgcagatt tgcttgaaaa tttacgcaac
     1501 aaaggctatg taagagctca aattgatgga gttttggtaa gacttgatga agaaattgaa
     1561 ctagccaaaa ccaaaaaaca caccattaaa cttgtcatag atagacttga aattcaagaa
     1621 gatttacttt ctcgtcttgc aagcgatata gaaaaaggtt tacaggaaag ctttggagaa
     1681 atagaaatag aagttttaaa tcatgaggaa ataaacctta ataaacacta tcattttagc
     1741 gagcattcag cttgttttga ttgtaaaatt tcctttgttc cacttgagcc tttaagcttt
     1801 tcttttaatt ctccaaaagg agcatgtgaa gcttgcgatg gacttggaat tcgttatact
     1861 ttagatatga aaaaaatcat cgatgaaaat ttaagtctcg aaaacggtgc tgttaaaatc
     1921 atgtatggtt ttaataaaag ttattattat aaattcctaa tcgccttttg cgaacaaaat
     1981 gaaattccta tcaaaatacc ttttatgcaa ttaaacgaag tacaaaaacg tcttgtattg
     2041 tatggtaatg ccaaaactat agaatttctt tggaaaagaa atcgcctaaa acgcactttt
     2101 gaaggcgtgg ttaaaatggc ttatgaaatg ctaaaagatg aaaaagattt agccgaatat
     2161 atgagtgaaa aaatttgtaa agactgcggt gggcatcgtt taaaacctga aagtttagcc
     2221 gtgaaagtag caaaaaaaag cttgggtgaa attttagata tgagcataga agatagtacg
     2281 gccttttttg cagatgagaa aaatttttct tatttaagcg agcaacaaaa acttatttct
     2341 aaacctatcc taaaagaaat caacgaaaga ttgtttttct tgtatgatgt ggggctaggt
     2401 tatctttctt tagggcgcga tgcaagaacg attagtgggg gtgaagcaca aagaatccgc
     2461 atagcttcac aaattggcag tggtttaagc ggagtgatgt atgtcttaga tgagcctagc
     2521 ataggacttc atgaaagaga tactgcaaaa ctgattaaaa ctttaagaaa tttacaacaa
     2581 aagggcaata ccctaattgt cgtagagcat gataaaatga ccatagaaga agcagatttt
     2641 attgtagata ttggtccaaa agcaggaaaa tttgggggtg aggttgtatt tagtggaact
     2701 tataaagaac ttttaaaaag caaaagcgaa actgcacttt atatgaatgg taaaaaacaa
     2761 atttcacaac ttcaaaacag aacacagaaa gaatggcttg agcttaaaaa tgtaaatatt
     2821 aacaatatcc aagatttaag cgtaaaattt cctttgcaaa atttagtcgc tataacagga
     2881 gtttcaggtt ctggaaaaag ctctttgata cttcaaaccc tacttccttt tgcacaagag
     2941 gaattaaacc gtgcgaaaaa agttaaaaaa cttggcggag tacaaataga aggacttgaa
     3001 aaacttgata aagtcattta tcttgatcaa agcccaattg ggcgcacacc acgttcaaat
     3061 cctgccacct atacaggtgc tatggatgaa atcagaaatc tttttgccgc cactaaagaa
     3121 gccaaaatgc gtggttataa agccggacgc ttttctttta atgtcaaggg tggaagatgt
     3181 gagaaatgta gcggagatgg agaaatcaaa atagaaatgc attttttacc tgatgttatg
     3241 gtagtttgtg atacttgcgg gggcaaacgc tacaatgatg ccacgctaga aatcaaatat
     3301 aaaggcaaaa atatcagtga aattttaaat atgagtgttt tagaagcgag tgaatttttt
     3361 acagccgttc ctaaaatcaa acaaaaatta gatactctag taaaagtggg tttagattat
     3421 ctaactctag gacaaaatgc caccacctta agtggaggtg aagcacaaag aatcaaactt
     3481 gctaaagaac taagccgtag cgatacagga aaaacgcttt atatacttga tgaacctaca
     3541 acaggactgc attttgaaga tgtcaataaa ctcatcttag ttttacaaca tttggttgat
     3601 cttaaaaatt ctgtttttgt gatagaacat aatttagatg tgattaaaaa tgctgattat
     3661 atcatcgata tggggcctga aggcggagtt aaaggtggaa aagttataag cacaggaagc
     3721 gtggaaaaag tcgctaaaga acacaaaaaa acccgttctt acacaggata ttatctagac
     3781 ttagagctta aaaatacaca aaaatcataa ttttatgttt gattttttat ataatgatat
     3841 tagctatttg gggcttttca tggtgtgttt tctttcaagc acactattac ccttagcaag
     3901 tgaagccttt gttttaggct ttataaaact tgattttaat ccgaatttgg tacttatcgt
     3961 agccactttg ggtaatacct taggaagttt aagtacttat gctttagcgt attttggaaa
     4021 agaaaaaatt ttagaaaaat actttagcaa atccttgaaa aaattagaaa atttcaatgc
     4081 taattttgct aaatttggaa gtatatttgc tttttttact tttttacctt tagtgggaga
     4141 tctttttgcc ttgggacttg gttttgcgaa atattctttt ttaaaaacta tattttttat
     4201 cttacttgga aaattaagtc gttatacttt cataattttc atagcaaact ccttttaaaa
     4261 gcctctcttt tataagtttt aaaagccttg cattatctac attttttaaa attttaacac
     4321 aatttttagt gcttaaatcc acccccatac tcatttttgg ttctctaaaa caacgccaac
     4381 tcatacctct tgccaaagaa ctatcgcaaa taacatcagc ataacactca tcaaaatctg
     4441 caatactaga atctaatgcg caagctatcg ttaaagcatc atgtatccaa gttccctttg
     4501 taccacgtgt tttagaggca taatcaatcc aaacacctaa agtttcaacg ataaaatcac
     4561 ataaaatatt cttaccttgc aactctttta aatcctcgtg tgttaataaa gtctgcatgg
     4621 ttgcattata aggtatgagt gtaattttag ctcttgaatt tagcactata ctagccgcct
     4681 caggatcaaa accaaaattt gtatctttag tgtaataagg catatcaaaa ctgccgccca
     4741 taataaaaag ctctttaaga tttatatcaa aatctttaaa aattttcata gtcatagcga
     4801 tatttgtcaa aggtcctatc gcacaaatag aaatttcttt aggattttta ctcaccaact
     4861 cacccatttt aaaaatcgca tcaggattta tattttctaa aatttcagga ctttttatat
     4921 tttcccaaag atattcaagt ttaaaatttt taacactttc atcaagtctt tgacgccaag
     4981 ctttacttgg ttcttttagg gcttcattcg ctcccaaata aacggggata tttaaattta
     5041 aacgttgaaa taaatcctta gccacactat aggcaacaag gcttggaaca ttaccgcaaa
     5101 ctgtgcttag catttcaagt ttgatttctt tagatgacaa aatcaaagca agtgctaaac
     5161 catcatcagt atttgctcct gcaatagcat tgcctatgtc cgtgtctaag ataagtctca
     5221 tatcgcatct tctattttat ttaaatctct acctctagtt tctggcgcaa aaaatgtagt
     5281 cacaaaacct atacctgcag ttaatacaaa atatgtcgcg ataggccacc aagagccata
     5341 atatgcaagc aaagcagaag ccaccatagg cgctgttcct cctgaaagaa tagaacctag
     5401 ctccttagca aaagccattt ttgtataacg gttttttacc ccaaaaagct ccacacccca
     5461 agctgcttgc acaccaaaaa tccctaaaga tgctaaagac atacctacaa taatagttaa
     5521 aatcacaata atttcatttt tactatctaa aagcataaaa gcaggaaaag cataaatcat
     5581 taaaagcaaa caaaacattc tataagtaat acatcttcca aatttatcac ttaaataacc
     5641 cgccaaagga ataactaaaa accctaccaa tgaagctatc attaccgctg tagtagctac
     5701 tgatttgtct aaaagtaaaa ttttagtcac ataacctaca ataaaacctt gcgcaagata
     5761 agaaggtcca ttttcgccta ttcttaagcc caccatagtc caaaaagcac gacttctttg
     5821 ccaaaaactt ctttcatctt ttttcatatg cttttcgtta ttaagacgca atttcatcat
     5881 ttcatttttt tgcttttcaa aaacaggggt ttctttgaca tgaaaacgaa tatatacagc
     5941 aaaaagagcg attaaaatac ttcccataaa aggaactctc cagccccatt ctttaaaact
     6001 tgcttcatcc atttgtacca tcaaaagcca tacaaaagac gcaagcaaag ttccactatt
     6061 tgatcctaaa gcaatcacag aagaaacaag ccctcttctc ttgctaggag catattctcc
     6121 tagcataact gttccacctg aaagttcagc tcctgcgcca aaaccctgca taaaacgtaa
     6181 tgcaaccaaa caaataggcg cccaaacacc aatcactgca taacttggga taaaacctat
     6241 cagagtagtt gaaattccca ttaaagctat tgtagccatc ataacatttt ttcttccgtg
     6301 tttatcacct aaatgaccaa aaaacaaagc cccaataggt cttgcaataa aacctatgcc
     6361 ataagttaca aaactaagca aaagtgcaat tactggagtt tgctcaggaa aaaatacttc
     6421 tgaaaaaatt gttgcagctg ctaaaccata aagtgcaaaa tctgcatatt ccatagcagt
     6481 tcccaaccag caagaaaaaa ctgccttttt aaaaactttt ctaccttcag gtgtgttaaa
     6541 attcttatct gcaattccat caatttgctg atttgtcatt acattttcct tacattattc
     6601 atataaaatt tttactctac tcgatattat gactaaaaat tgaagtattt tcgcttaaat
     6661 atctttaaat ttcgagacat tttaagcaaa attttgaaat aatataacca aaaaatatat
     6721 tttatcaaaa gaagaaatta ttatgaaaac tttaactatt gttgatactt ttggattttt
     6781 tttcagactt tactacgcat taaaaggttt taaaaattca caaggacaag ctagtggaat
     6841 gattagcggt tttgcaaatt ttatttatag cttaaaaaat gaatataaaa gtgattatat
     6901 tgtttttgca ttagattcca aaggaaaaac ttttcgtagc gaaattgatc caaactataa
     6961 acaaaatcgc actccaccgc cacctgaact tctagaacaa attccaattt gcataaagat
     7021 gatagaaaaa atgggtttca taagcgtttc tcaagaaggt tatgaagctg atgatatcat
     7081 tgcttctttt gtaaaaactt gtgaaaatag agatattttt gtacgtatta tcactcaaga
     7141 taaagatctt tatcaactca taaaagatgg taaaacaagc atttacagtc ctatttctaa
     7201 aaacgactat gatgaagcag cgtgtttaga aaaatacgga gtaaaaccta atcaaatcag
     7261 agatttttta gctctttgtg gggatagttc tgataatatt ccaggcgtta aaggtatagg
     7321 tgcaaaagga gctaaaacct tgcttgatga gtttggtagc atagagggaa tttatgaaaa
     7381 tttaacccta gtacgtaacg aaagaagtcg taacttgctt ttagagggta aggaaaatgc
     7441 atttttaagc aaaaaattag cttctttgta tgacaattta gaagtacaaa atctcataga
     7501 aaaagccact tatcctgatg aagaacctct tttaaaaata cttgaaattt tagaacatta
     7561 cgaacttaat actttgctta aaaaactgcg tcaaaatcct gataataaag ataaaaattt
     7621 aggttttaaa gccactttag tacaagatga aaacaaactt tttgaaattt taaataccct
     7681 tgataaagaa agtattattg cttttgatac cgaaaccaca ggacttgata ctaaagaagc
     7741 aaaaattgtt ggttttagtt tttgcatgaa tgaaaatgaa gccttttacg tgcctttaac
     7801 tcataattat cttggagtag gtgagcaaat ctcattgcaa agtgccaaaa aagctataga
     7861 agtaatcttt aatcattttg ttatagggca caatctcaaa tatgatttta aaatcattca
     7921 aaacaatttt gacttaaatt tacctcaaaa atacgcagat acaatgattt tggcatggct
     7981 taaaaatcct tctttaagag taaatatgga tgatttagcc ttaagacttt ttaattacga
     8041 aaccttgcat tttgaaagcc ttgttaaaaa aggagaaaat tttgcaagtg tagaacttga
     8101 aaaagcttgt aaatacgctg cagaagatgc ttatatcact ttaagatttt atctttattt
     8161 tttaaaaaat cttgaaactc ctttattaga acttgctaaa aactgcgaat ttgatttcat
     8221 taaaatcatt atgatgatgg aagaaaatgg cataaagctt gatacaaatg cacttgaaat
     8281 ccttatgaaa aaatttgaaa atgaaatcaa aaatttaagt gaagaaattt atactctttg
     8341 cgaggataga tttaatctaa attcacctaa acaaatgggt gatatacttt ttgaaaaact
     8401 caaactccca agcggaaaaa aaggaaaaac aggatattct accgatgaaa aagttttaaa
     8461 tatactttta gataaacatc ctgtaattgc taaaatttta gattatagag aacttgccaa
     8521 actttattcc acttattgcg aacctttgtt aaaactagcg ttaaaagata aaaattcacg
     8581 catttattca agttttttac aaactggaac cgctacagga cgtctttcat ctaaggatcc
     8641 aaatttgcaa aacatccctg cacacggaca atatgcaaaa gattataaat cttgctttgt
     8701 agctaaagat ggatttagtt ttatctctct tgattattct caaatcgaac ttagaatact
     8761 tgcacatttt agcgaagatg aaaaactttt aaatgctttt gccaatgatg aagatataca
     8821 cgcaagaaca gcaataatga tttttggtga aagcaattat gaaaccagaa gtgttgcaaa
     8881 aagtataaat tttggactta tttatggtat gggttataaa accttaagtc aaaatttaaa
     8941 aatagaagct aatttagcca aatcttacat agaaaaatat tttgaaaatt ttactagcat
     9001 taagaaatat tttgaaaaag ttaaaaacga agctaaacaa aatggtttta ttgttacttt
     9061 aagcggtcgc aagcgttatt ttgattttga aaacgcaaaa cctatgcaaa ttgccatgta
     9121 tgaaagagaa agcattaatt caatcttgca aggctcagca gcagatgtaa tcaagcttgc
     9181 aatgctagaa atcaataaag aattaaatga agataaaaag cttattttac aaattcatga
     9241 tgaattaatt tttgaagtaa aagacgattt gtgtgaaaat tttgtaaaaa aaactagaga
     9301 tattatggaa aatatagtaa aattaaaagt aaaattaaaa acaagttcaa gtatcgccaa
     9361 aaattggggc gatttaaaat aatcaaggag ataattaatg gatctttcaa ccatattagg
     9421 aatggtgctt gcagttacta gtatttcggt aggagatata ctagagggag gcaatccttt
     9481 gcatgttgtg catctttctt cctttctcat agttatgcca acagctgcat tttgcgcaat
     9541 gacttctacg cataaaaaaa ttgtaaaagc agcctacaaa gaactcaaag ttgtttttaa
     9601 aggttctgga gtaaatttac ccgaaaggat agcccagtta atagaatttg ctattattgc
     9661 aagacgagat ggtcttttag cgttagaatc aagaaccagt gagattgaaa atgaattttt
     9721 aaaaaatgct atgatgatgc ttgtagatgg taaaagcttt gaagaaattc acgaaagcat
     9781 ggaaatacaa accgaacaac ttgaagagca ttataaagaa tgcgcagaat attggatagt
     9841 atttggagaa acttgcccta ccatggggct tgttggagcg gtttttggtc ttattctagc
     9901 tcttaaattg ctagacaatc ctcaagcaat ggcagcgggt atttcaggtg ctttcacagc
     9961 tacagttacg ggaatttttg gcgcttatgc actttttgct ccttggggga aaaaattaaa
    10021 agctaatgga atggatcttg taaaagagca aattgttatt actgaagcta taaaaggaat
    10081 tgcagaaggt gctaatccta gagatttaga agctaaactt tttaacttct taagtcacga
    10141 tgatccaaga atttcacaat ttgacaaagg ttaaaaatgg ctaaaaaaca taaatgccca
    10201 gaatgtccag caggtgaaaa atgggctgtg ccttatgcag actttctaag tttgcttttg
    10261 gcacttttta ttgctctttg ggcaatttct aaaacaaacc ctgctaaagt agaggcttta
    10321 aaaactgaat ttgttaaaat ctttgattac acctctactc aaacagtcaa agaagagagt
    10381 aaaacccaag aaaaatataa aggcgcagca aaagaagaaa gcgatgaact caaatcgtta
    10441 aaacaaatga ctatgacaca gcaagaaact atcaaacgtc ttcaagcagc tctagatcaa
    10501 agcgataatc aggttgctct taaccttcca tctaaagttg aatttgaaag aggtagtgct
    10561 caaatcgttt cagctgatat acaagattat ttaaaacgta tggctgagct aacaacatat
    10621 ttgccacctc aagcaaaaat agaaattaga ggctatacag acaatagcga ctctattata
    10681 agaagttatg aactcgccta ccaaagagcg gaaaatgtat taaaatattt tatagaaggt
    10741 ggagcaaatt tgaaaaatat tagcattaaa agctacgggc ttaataatcc tatcaatgga
    10801 aatccacaaa ctctagaaaa taatagagta gaaatatatt ttaaagtcga tacagcagat
    10861 acaagtactc aaaaatcggt tcttgagctt attaacaaaa taggaactaa agcaccttaa
    10921 aagttttagt ttcctttttt tacttgacca gctaaacgac tcttattatt tgtattataa
    10981 acaaatccta gtacctcagc tacagcttta aacatttccc taggaatgag atcattaaca
    11041 tcgcaagctt tataaagctc ccttgctaaa ggaggatttt cataaactac aacattattt
    11101 tcataggcta cttgttttat acgaagtgcg agaaaatcca ctcctttagc aacaactcta
    11161 ggagcttgtt ctttacttgt atcataacga atagctacgg cataatgagt tggatttgta
    11221 atcactacat ccgcacctgc aacatcttga accatgcggc gacgcgcagc ttccatttga
    11281 agtctacgaa ttctaccttt aacctgagga tctccttcca tttgtttata ttcatctttt
    11341 atttcttgtt tgctcatacg caaaccttta aaatactgaa aacgcaccaa aaaaacatct
    11401 aaaacagcaa taattaaaaa agcaactata acaatagctg ctaaaacaat agccctatct
    11461 cttagccaag taagctgtgc aaccatagta taaagctcaa ctcttggaag ctcttgcata
    11521 aatttaagca aaactataaa agctatagta aaaacaatac ccacttttaa aataattttt
    11581 atactttcaa caattttttt caatgaaaaa aggtttttta aacctttcaa aggattgatt
    11641 tttcctaaat ttggcataat aggtttggtt gtaaaaataa aaccaaattg cataatattt
    11701 cccaaaaccc cagcaatcat aatacttaaa acaataggtg caagaataat taaaacctca
    11761 aaaatgcttt taatcataat ggcttgaata atacgcaaat caaattcaac accaataaaa
    11821 ctttgatagt atctatataa atttacaatt ctctcgccca taaaactcaa cataaataaa
    11881 gttatagtta ctccaattat caaagttaca atagctgccg catcttgaga ctttggaaca
    11941 ttaccttctt tacgcgcatc ttctatcttt ttggacgtgg gttcttctgt tttttcttga
    12001 tcttcgcctg ccatatttta gcctaagtaa aaattttaat atatgcaaaa ttataataga
    12061 aaaattatga atttcaatta aagaataaaa ataaagaaaa agcctcgtaa agaggcttta
    12121 tactaagaaa ttaaagttta gcttcgtttt tgccaagata ttcagctaca cctttagggt
    12181 tagctttcat accttcatca cccttattcc atcctgcagg acaaacttca ccatgctcat
    12241 ttgtaaaaag catagtatca accattctta acatttcatc tatgtttcta cctagtggca
    12301 aatcattaac cacagcatgg cgaactgttc catcagcatc aagcaagaac gaaccacgaa
    12361 gggcaactgc ttctgcataa agtacatcaa aatttctagc aatctgctta gttaaatcag
    12421 caacaagtgg gaatttaacc tgaccaatac caccttgatt taccggagta tttttccaag
    12481 caaaatgtga aaattcatta tctcctgaaa ttccaattac ttcaataccg cggtttttaa
    12541 attcttgata tcttttgtca aaagctataa tttctgaagg acaaacaaaa gtaaaatctt
    12601 ttggataaaa gaatactacc gctccttttg gacctatgtt tttataaaga ttaaaatctt
    12661 gaacaatttc attgtttcct aataccgctg gagcagtaaa atctaaagct tttttagtaa
    12721 ctatcatatt ttctcctaaa taataaattt tattgataac gaaa
//
LOCUS       DAPIYB010000051        12489 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.052, whole genome shotgun sequence.
ACCESSION   DAPIYB010000051 DAPIYB010000000
VERSION     DAPIYB010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12489)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12489)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12489
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.052"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..263
                     /locus_tag="RJ318_001152"
     CDS             <1..263
                     /locus_tag="RJ318_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431023.1"
                     /translation="ITPFGSSSQAFIVSNNQNTFEFWKEKFKNIKDFKIASKNSLFCD
                     FSYNQLSDLRKLKNFKYCLILENYDIFEQEFENKENQTPSLF"
     gene            complement(255..707)
                     /locus_tag="RJ318_001153"
     CDS             complement(255..707)
                     /locus_tag="RJ318_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDV7431024.1"
                     /translation="MFKVYYKMPLCYLSLHSDGKFLTRVDFCDNKRSEKNCSLLDLAK
                     YELDLYFTHKLRKFSIPVLIQGTDFESKVYKALMEIPYGKIATYKDIAEKINHPKAFR
                     AVGNANSKNQIPIFIPCHRVIASNGIGGYNGGLEIKRFLLENEGVNLK"
     gene            762..3308
                     /locus_tag="RJ318_001154"
     CDS             762..3308
                     /locus_tag="RJ318_001154"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDV7431025.1"
                     /translation="MSFMQEYNKLVEERAALGIPPLPLNANQTRELCKLLENENNEEL
                     ANLLENRVNPGVDDAALVKCEFLDSILKGKISAPNIDKKRALRMLGTMLGGYNVKVLI
                     DALKDENIAKDAAEVLKNIIFVHDNFHTIAELSKNNPHAKEVLQSWANADWFNKKEKL
                     PQVIKCIVFKVAGETNTDDLSPAGDAFTRSDIPLHANAMLKVRQTGSLEKIKELKKSG
                     REVVYVGDVVGTGSSRKSAINSIQWHLGKEIEGVPNKHSGGIIMGSTIAPIFFNTAQD
                     SGALPIICDVTNLEMGDEFEIHPYEGKIIKNGSTIAEFTLSPNTLLDEVRAGGRIPLI
                     IGRGLCTKAREFLGMESENIFTKPEQPKSSSGGYTLAQKMLGRACGVEGVRPGMYIEP
                     ITLTVGSQDTTGPMTRDEIKELASLGFNADFVMQSFCHTAAYPKVSDSNLHKTLPNFM
                     TSRGGVSLKPGDGVIHSWLNRFVLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAVTG
                     SMPLNVPESVLVRFSGELQAGVTLRDLVNAIPYYAIKQGQLTVEKKNKKNIFAGKILE
                     IEGLPNLKVEQAFELSDASAERSAAACSVDLSIESVSEYIKSNISLIEAMIEVGYENK
                     ATLARRAEKMREWLKNPTLLRADKDAKYAYIIDINLNNIKEPILACPNDPDDVATLSE
                     ILADDKRPKNIDEVFVGSCMTNIGHYRALGEILKDKGILKTRLWVVPPTKMDKAQLIN
                     EGYYSIFGAAGARIEVPGCSLCMGNQARVNDGAVVFSTSTRNFDNRMGMGAKVYLGSA
                     ELAAVCAILGKIPSKEEYLQIVSEKLSNEHKANIYRYLNFNEIENFKLEN"
     gene            3358..4596
                     /locus_tag="RJ318_001155"
     CDS             3358..4596
                     /locus_tag="RJ318_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDV7431026.1"
                     /translation="MKLLFTSFCCFASLMASDAINCDNIKNNKTLLNESSNLDYLNIA
                     SSCKESLKNQDFTKKLYAISNEIRGSNSSCNGVAYLPKLQQFDFLLLKIAIDPIAYQK
                     TLDTPENLEKKYDILKSYFRYWAYQSIGNFRLYKAFWQEYNNAIEPLEKYFESNFNFD
                     KGSNIYYTSNALNEFLNWAVGETKIYKDISPLAKIMSNKNYSVSYIQDFIFSNNPSQD
                     DLTIALQAALLNQREKEILELLIRFGARIDEGYESAIFYALESYENTNFLIQNGANVN
                     QANAFGKTPLFYAIEFNRLDIIKLLLDNGANVNQKYINNNEKLALSANIGSNTPYFIT
                     FCALEHTSKNVLMHAAAYGNVEILKLLISKGANFNAVDDLGFNALDFALSAGKKENAD
                     YLKSLGLKANENLFYGGSLE"
     gene            4593..5342
                     /locus_tag="RJ318_001156"
     CDS             4593..5342
                     /locus_tag="RJ318_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDV7431027.1"
                     /translation="MKTAFITGASSGFGRACVEAFIQEGYKAIALARRKERLEELKNA
                     YKDKIYTLCIDVRNQKEIFEAIENLPKEFQEIDVLFNNAGLALGVDEFDKLNLEDINT
                     MVDTNIKGFLYVAKAIIPILRKQKNAYIFNLGSVAGRNPYFGGNVYCGTKAFVGQFSL
                     ALRNDLRGSNIKVTNIAPGLCKTEFSEVRFKGDIQKADAVYENTQFISANDIAKVVMS
                     IINLPSHINVNEIELMPVTQTWNGFYIERDE"
     gene            5339..7072
                     /locus_tag="RJ318_001157"
     CDS             5339..7072
                     /locus_tag="RJ318_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDV7431028.1"
                     /translation="MNKFLVSLFLPLVAFANSSEAAANANLFGAFTLIPPLVAIALAF
                     ITKDVILSLFTGVLSGTFLLSLSTNIFKAQHLTFVNYYNTTVESFSKIISYILGSTSD
                     PVNAGIILQILCIGGLVALITKMGGAKAVALKFAKRAKSAVSAQVNTWFLGLLIFFDD
                     YANLLIVGPIMRPLADKFKISREKFAFIIDSTAAPVAGIAVISTWIGLEVSLIKTAYE
                     HIGISNISAFGIFVETIPYRFYNIFMLFFVVMTAIMGREFGSMYKAEVRARTTGQIAP
                     LPKSGTLDTTELEDQFLAPKEGIKIRAFDAIVPIFTLIILAILGFYFNGLSTLEGEEL
                     AKASTNPLSFETFRAAFGNADSSVVLFQAALFAAIVAIFIGVRRKIFNLKEAVETWIY
                     GWKTMIFTIVLLLFAWSLSSIVKDLGTSLFITSLLADKLPEFILPATIFAFASAISFA
                     IGTSYGTMGILMPLAVPLAHEIAKINGMDANAIHHYMVINISCVLTGAIFGNHCSPIS
                     DNVILSSMSAKCDHMEHVRTQIPYALFICGISLIAGYIPVSLGLSVWFVLPLNFILIA
                     LLLRLIGKKVP"
     gene            7069..8142
                     /gene="trmA"
                     /locus_tag="RJ318_001158"
     CDS             7069..8142
                     /gene="trmA"
                     /locus_tag="RJ318_001158"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HDV7431029.1"
                     /translation="MSLENFGNFLTLDEKHSFIKKYFKEFYTKDFKLFASKDKHYRTR
                     AELSFYHENDTLFYAMFDPKRKKKYIIEYLDFADEKICAFMPRLLEYLRQDNKLKEKL
                     FGVEFLTTKQELSITLLYHKNIEDIKSNLENLSNILHINLIARSKGKKLIFKTENLRQ
                     TLNIQDRKIFYEFNNDCFIQPNTAINEKMITWVCEILNTQKRMDLLELYCGYGNFTLA
                     LAPFFFKILATEISKSNINFALKNCELNNTTNIHFARLSSEELSLAIKKEREFFRLKD
                     IRLDDFNFSHVLVDPPRAGLDKSVIDLIKKYGNIIYISCNPITLKENLKELSLTHRVE
                     EFALFDQFVNTPHLECGVFLSKV"
     gene            complement(8129..8545)
                     /locus_tag="RJ318_001159"
     CDS             complement(8129..8545)
                     /locus_tag="RJ318_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002956941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopD"
                     /protein_id="HDV7431030.1"
                     /translation="MEEFYPYTLTIHLLCAILFIGYLFVDVFVLGVVKKKNPNFDKSL
                     FSATGVKIMPFVVLLLFLSGGALAGFHFKPLNLLFAVKIILAFGILSLVVFSLFCHFI
                     LKKKNPLGVFIHPFVFVLCIAIVILAKLMNYFFIPC"
     gene            8664..9077
                     /locus_tag="RJ318_001160"
     CDS             8664..9077
                     /locus_tag="RJ318_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HDV7431031.1"
                     /translation="MNEKETISYIINTSKNIVIFALSPDKTKASYRVAEFLQRKNYKI
                     FPIYPKEEFILNEKVYRNLDQIEEKIDTLILFRKGEVALEILPKLVEKNIKNLWLQLD
                     ISNETAKEECKKLDINFIQNRCIMLEYPHFKTKEK"
     gene            9077..10288
                     /locus_tag="RJ318_001161"
     CDS             9077..10288
                     /locus_tag="RJ318_001161"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HDV7431032.1"
                     /translation="MLELNKIYKAKQQISGFVNKTPFIYSSFLSDICQSEIYLKNENL
                     QITGAYKIRGAYNKIANLSTEQKQHGVIAASAGNHAQGVAISAKKFSIKAVIVMPEST
                     PLLKVSATKALGAEVILRGDNFDEAYAFATSYAKENNLSFIHPFEDEFVMAGQGTLML
                     EMLDEISDLDMIIAPVGGGGLISGISSTAKQINPNIKIIGVGAKGAPAMYESFHAKKI
                     KNAKSVRTIADGIAVRDANPINFNIILECVDDFIQVDDEEIANAVLFLLEKHKIIVEG
                     AGAASVAALLHQKINTQNHKKIGVVLSGGNIDAQMLNIIIEKGLFKSYRKMQIHVTLV
                     DKPGALLHLTDSLKIANANIVKIDYDRFSTKLDYGDAMISITLETKGKEHQEEIRKIL
                     TQKAFNFYESF"
     gene            complement(10285..11010)
                     /gene="truA"
                     /locus_tag="RJ318_001162"
     CDS             complement(10285..11010)
                     /gene="truA"
                     /locus_tag="RJ318_001162"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDV7431033.1"
                     /translation="MMKIKIIFSYDGSAFLGSATQPHKKGVQDALSGALSHLGIVSPL
                     LMASRTDKGVHASYAVASVECGDHFVNLEYLQKQLNKFSHPFIHIKKIEKVKDDFEVR
                     FDVKSREYRYIFSHSSYSPFMASYVHFYPKFDLDKANELLGFFVGKKDLKFFCKSGGD
                     NKTTLREIFIARAYAYKDFSIFHFKANGFLRGQIRLSVASVLKVLEGKMSEKELKEQI
                     EAKKQYNHFLAPPNGLYLSRICY"
     gene            complement(11007..12032)
                     /locus_tag="RJ318_001163"
     CDS             complement(11007..12032)
                     /locus_tag="RJ318_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDV7431034.1"
                     /translation="MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEI
                     SFLDLLKLYGFMLPRILIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKF
                     FLKIASLISAFMLVVALVMIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFI
                     EKQDSDKYENIIMYRPKHKADDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQS
                     IFSGEFDTLVVNTQFNTDNLQTKKFYEYWNDLNENPQRAREFVIYTTIALFPLASTLF
                     ALCFGLVTYRYEKGYVYLGMFGVIAIYFGLLSSFSQPPILACLGIFSLSLFISAYCFK
                     KMILSRY"
     gene            complement(12032..>12489)
                     /locus_tag="RJ318_001164"
     CDS             complement(12032..>12489)
                     /locus_tag="RJ318_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDV7431035.1"
                     /translation="LLSLIDIKLKAVPQILLWSAFLFAFFYAFRESEILHFLIFKEFS
                     GGFLLNAFSFGGFVFLLKSLVFFLMNFQKKDEILENLGDADIIIMSCIGGILGFEYGF
                     LVLLIASILTLPFFIFFKIKAIKEQELAMIPFLNIAFVAVLFYKNLGLF"
BASE COUNT         4614 a         1932 c         1961 g         3982 t
ORIGIN      
        1 aaatcactcc ttttggttca agctctcaag cgtttattgt aagcaacaac caaaatacct
       61 ttgaattctg gaaagaaaaa tttaaaaaca taaaagactt taaaattgct tctaaaaatt
      121 ctttattttg cgatttttcc tataatcagc tttcagattt aagaaaatta aaaaatttta
      181 aatattgttt aattcttgaa aattatgata tttttgagca agaatttgaa aacaaagaaa
      241 atcaaacccc aagcttattt taaattcact ccttcatttt caagcaaaaa tctttttatt
      301 tcaagccctc cattatatcc tcctatgcca ttgcttgcaa taactctatg acaaggtata
      361 aaaataggaa tttgattttt agaatttgca tttccaacag ctctaaaagc ttttggatga
      421 ttaatttttt ctgctatatc tttataagta gctattttgc cataaggaat ttccattaaa
      481 gccttgtaaa cctttgattc aaaatccgta ccttgtatca aaacaggaat gctaaatttt
      541 ctaagcttat gagtaaaata taaatcaagt tcatattttg ctaagtcaag caaactacaa
      601 tttttttctg atcttttatt atcacaaaaa tcgactctag ttaaaaattt tccatcacta
      661 tgtaaagata ggtaacataa aggcatttta taataaactt taaacatttt ttatccttca
      721 aagagctaca attataataa aaaatattta aggagtagaa aatgtctttt atgcaagaat
      781 acaataaact tgttgaagaa agagccgctt tgggtatacc accccttcct ttaaatgcaa
      841 atcaaactag agaactttgt aaattacttg aaaatgaaaa taatgaagag cttgcaaatc
      901 ttttagaaaa tagagtaaat cctggtgttg atgatgcagc tttagtaaaa tgtgaatttt
      961 tagattccat acttaaaggc aaaatcagtg ctccaaatat agacaaaaaa agagccttaa
     1021 gaatgcttgg aactatgcta ggcggatata atgttaaagt tttaatcgat gccttaaaag
     1081 atgaaaacat agccaaagat gctgcagaag tgttgaaaaa tattattttt gtacatgata
     1141 atttccatac catagctgaa cttagcaaaa acaatccaca cgctaaggaa gttttacaaa
     1201 gctgggcaaa tgcggactgg tttaataaaa aagaaaaact accacaagtg attaaatgta
     1261 tagtttttaa agtagcaggg gaaacaaata ccgatgatct aagccctgca ggagatgctt
     1321 ttacaagaag cgatattcct ttacatgcaa atgccatgct aaaggtaaga caaacaggat
     1381 ccttagaaaa aatcaaagag cttaaaaaaa gcggtcgcga agtggtttat gtaggtgatg
     1441 ttgtaggaac aggttcaagt agaaaatcgg caataaattc catacaatgg cacttaggaa
     1501 aagaaataga aggtgtgcca aacaagcaca gcggtggtat aataatgggt tcaactatag
     1561 caccgatttt ctttaacact gctcaagata gcggggcttt acctatcatc tgtgatgtaa
     1621 caaacttaga aatgggcgat gagtttgaaa ttcatcctta tgagggaaaa atcataaaaa
     1681 atggctctac aatcgcagaa tttacactca gtccaaacac tctcttagat gaagttagag
     1741 caggaggaag aatcccactt atcataggtc gcgggctttg tactaaggct agagaatttt
     1801 taggaatgga aagtgaaaat atctttacca aacctgaaca acctaaatct tcaagcggtg
     1861 gttatacctt ggctcaaaaa atgctaggtc gtgcctgtgg agttgaaggt gtgcgtccag
     1921 gtatgtatat agaacctata actttaactg taggctctca agataccaca ggtcctatga
     1981 ctagagatga aattaaagaa cttgcaagcc taggttttaa tgcagacttt gttatgcaaa
     2041 gcttttgcca tacagctgcg tatccaaaag taagcgattc aaatttacat aaaaccttgc
     2101 ccaatttcat gacaagtcgt ggtggggtaa gtttaaaacc aggtgatgga gttatccact
     2161 cttggcttaa tcgttttgta ttgccagata ccgtaggaac gggcggggat tctcacacac
     2221 gctttcctat aggaatttct ttccctgcag gaagtggact tgtagctttt gctgcggtta
     2281 ctggttctat gcctttaaat gtacctgaaa gtgttttagt gcgttttagt ggagaattgc
     2341 aagccggagt taccttaaga gatttggtta atgctatacc ttattatgca atcaaacaag
     2401 gacaacttac cgttgaaaag aaaaataaga aaaatatttt tgcaggaaaa attttagaaa
     2461 tagaaggctt gccaaactta aaagtcgaac aagcttttga acttagtgat gcaagcgctg
     2521 aaagatctgc agctgcttgc agtgtggatt taagcataga aagtgtaagc gaatatatca
     2581 aatccaatat ctctttaatt gaagctatga tagaagtagg atatgagaat aaagctaccc
     2641 ttgccagaag ggctgaaaaa atgagagaat ggcttaaaaa ccctactctt ttaagagcag
     2701 acaaagatgc aaaatatgcg tacattatcg atattaatct taacaatatc aaggagccaa
     2761 ttctagcttg tccaaatgac cctgatgatg tggcaacctt aagcgaaatt ttagccgatg
     2821 acaagcgtcc aaaaaatata gatgaagttt ttgtaggttc ttgtatgaca aacataggac
     2881 attatagagc tttgggagaa attttaaaag ataaaggcat acttaaaacc agactttggg
     2941 tagtgcctcc aacaaaaatg gataaagcac aacttatcaa tgaaggttat tacagcatct
     3001 ttggcgcagc aggtgctaga atagaagttc ctggttgttc tttgtgtatg ggaaatcaag
     3061 caagagtaaa tgatggtgct gttgtcttct caacctctac aagaaacttt gacaatcgta
     3121 tgggtatggg tgctaaagta tatctaggaa gtgctgaact tgcagcagtt tgtgcgattt
     3181 tgggtaaaat tccaagcaag gaagaatact tacaaattgt cagcgaaaaa ctaagtaatg
     3241 agcataaggc aaatatctat agatatttaa attttaatga gattgaaaat ttcaaacttg
     3301 aaaattaatt caaatttaat actaaataac aaaattaaaa ttttcaaagg aaaaatattg
     3361 aagttattat tcacttcctt ttgttgtttt gcaagtttaa tggctagcga tgccattaac
     3421 tgcgacaaca ttaaaaataa taaaacattg ctaaatgaaa gttcaaattt agattattta
     3481 aatatagctt caagctgtaa agaatcttta aaaaatcaag attttacaaa aaaactctat
     3541 gcaatttcca atgaaattcg cggaagcaat agctcttgta atggtgtggc ttatttgcca
     3601 aaattacaac aatttgattt tttattatta aaaatagcta tcgatcccat cgcttatcaa
     3661 aaaactttag atacacccga aaatttagaa aaaaaatatg atattttaaa atcttatttt
     3721 agatattggg catatcaaag cataggaaat tttagacttt acaaagcttt ttggcaagaa
     3781 tacaataatg ctatagaacc tttagaaaag tattttgaaa gtaattttaa ttttgacaaa
     3841 ggcagtaata tttactatac tagcaatgcc ttaaacgaat ttttaaattg ggctgttggt
     3901 gaaacaaaaa tttacaaaga cattagtcct ttagcaaaaa tcatgtcaaa taaaaattat
     3961 tcagtatctt atatacaaga ttttattttt tcaaataatc caagccaaga tgaccttact
     4021 atagccttgc aagcagcgct tctaaatcaa agagaaaaag aaattttaga acttttgatt
     4081 cgttttggcg ctaggattga cgaaggttat gaaagtgcta ttttttatgc attggaaagt
     4141 tatgaaaata caaacttttt aatccaaaat ggagcaaatg ttaatcaagc caatgccttt
     4201 ggtaaaaccc cactttttta tgccatagag tttaatcgtc ttgatatcat aaaactactt
     4261 cttgataatg gagcaaatgt taatcaaaaa tatattaata acaatgaaaa attagcatta
     4321 agcgcgaaca taggttcaaa tacgccttat tttattacat tttgtgctct agagcacact
     4381 tcaaaaaatg ttttaatgca tgctgcagcc tatggaaatg ttgaaatttt aaaacttctt
     4441 atttcaaaag gagcaaattt taatgctgtt gatgatcttg gttttaatgc actcgacttt
     4501 gcgctatcag caggtaaaaa agaaaatgct gattatctaa aaagcttggg tttaaaagca
     4561 aacgaaaatc tattttacgg aggtagttta gaatgaaaac cgcatttatt acaggagcta
     4621 gttcaggttt tggtagagct tgcgttgaag cttttataca agaaggctac aaagcaatcg
     4681 cccttgctag acgcaaagag cgtctagaag agttaaaaaa tgcttacaaa gataagattt
     4741 acacgctttg catagatgta agaaatcaaa aagaaatctt tgaggctatt gaaaatttac
     4801 ccaaagaatt tcaagaaatt gatgtgcttt ttaataatgc aggtttagct ttaggggtag
     4861 atgaatttga taaattaaac cttgaagata ttaacactat ggtagataca aacatcaaag
     4921 gatttttata tgttgcaaaa gctattattc ctatacttcg caaacaaaaa aatgcttata
     4981 tttttaactt aggttcggtt gcgggacgca atccttattt tggaggcaat gtgtattgtg
     5041 gaaccaaagc ctttgtagga caattttcat tggccttaag aaatgatctt agaggaagca
     5101 atatcaaagt aacaaacatt gctccaggac tttgcaaaac tgaatttagt gaagtgcgtt
     5161 ttaaaggaga tatccaaaaa gctgatgcag tgtatgaaaa tacgcaattt atcagtgcta
     5221 atgatattgc caaagtggta atgtctatca ttaacctacc aagccatatt aatgttaatg
     5281 aaatcgagct tatgccggta acacaaactt ggaatggatt ttatatagaa agagatgaat
     5341 gaataaattt ttagtttcat tgtttttacc tttagttgca tttgcaaact cctcagaagc
     5401 agctgcaaat gctaatttat ttggagcttt tacgcttata ccacctttag ttgctattgc
     5461 tttagccttt atcacaaaag atgttatttt atcgctcttt actggagttt taagtggaac
     5521 ttttctactt agcctttcta caaatatttt taaagcacaa catttaactt ttgtaaatta
     5581 ttacaatact acagtagaat ctttttcaaa aattatttcc tatatcttag gttcaacttc
     5641 agatccagta aatgcaggaa tcattttaca aattctttgt ataggtggtc ttgtggcact
     5701 tatcacaaaa atgggaggtg caaaagctgt agcattaaaa tttgccaaaa gagccaaatc
     5761 agctgtatca gctcaagtta acacttggtt tttagggctt ttaatatttt ttgatgacta
     5821 tgctaattta ctaatcgtag gtccaattat gcgtcctttg gcagataaat ttaaaatttc
     5881 tcgtgaaaaa tttgccttta ttatcgactc taccgcagct cctgtggcag gaatagctgt
     5941 aatttctact tggataggct tagaagtttc tttaattaaa accgcttatg aacacatagg
     6001 cattagcaat attagtgctt ttggaatttt tgttgaaacc ataccttatc gtttttataa
     6061 tatcttcatg cttttttttg tagtcatgac tgcaatcatg gggcgtgagt ttggttctat
     6121 gtacaaggct gaagtgcgtg caagaaccac aggacaaatt gctcctctac ctaaatcagg
     6181 cacactagat actactgaat tagaagatca gtttttagca ccaaaagaag gtattaaaat
     6241 tcgtgctttt gatgctattg ttcctatttt tactttaatc attttagcta tattaggatt
     6301 ttattttaat ggacttagca ctttagaagg cgaagaactt gcaaaagcaa gtaccaatcc
     6361 tttgtctttt gaaactttta gagctgcttt tggaaatgct gattcttctg tggtgttatt
     6421 ccaagctgct ttgtttgctg ctattgtagc gatttttatc ggggtgcgtc gtaaaatttt
     6481 caatcttaaa gaagcggtag aaacttggat atatggctgg aaaaccatga tttttaccat
     6541 agtattgctt ttatttgctt ggtcactttc aagcatagta aaagatctag gaacttcttt
     6601 atttatcact agtttgcttg cagacaaatt gcctgagttt attttgcctg ctactatttt
     6661 tgcttttgct tcagccattt cttttgccat aggaacaagc tatggaacta tggggatttt
     6721 aatgccttta gctgtgcctt tagctcatga aatcgccaaa atcaatggta tggatgcaaa
     6781 cgctatacat cattatatgg ttattaatat aagctgcgtt ttaacaggtg cgatttttgg
     6841 aaaccattgc tcaccaattt cagataatgt aatcctttca tctatgagtg caaaatgcga
     6901 tcatatggag catgtaagaa cacaaattcc ttatgcttta tttatctgtg gcatttcttt
     6961 aatcgctgga tatattcctg tatctttagg acttagcgtt tggtttgtct tgcctttaaa
     7021 tttcatactt attgcacttt tactaagact catcggaaag aaagttccat gagtcttgaa
     7081 aattttggaa attttctcac tttagatgaa aaacattctt tcataaaaaa atattttaaa
     7141 gaattttata caaaggattt taaacttttt gcttcaaaag ataaacatta tcgtacaaga
     7201 gctgaacttt cattttatca tgaaaatgat acgctttttt atgcaatgtt tgatccaaaa
     7261 aggaaaaaaa agtacattat agaatattta gattttgctg atgaaaaaat ttgtgctttt
     7321 atgccaagac ttctagaata cttgcgtcaa gataataaat taaaagaaaa actttttggt
     7381 gtagaatttt taaccacaaa gcaagaactt agcataacct tactctatca taaaaatata
     7441 gaagatataa agtcaaattt agaaaattta agcaatattc ttcatatcaa cctcatagca
     7501 agaagtaaag gcaaaaaact tatttttaaa acagaaaatc taagacaaac tttaaatatt
     7561 caagatagaa aaatatttta tgaatttaac aacgattgtt ttattcagcc taatactgct
     7621 ataaatgaaa aaatgattac ttgggtgtgt gaaattttaa acactcaaaa aagaatggat
     7681 ttgcttgagc tttactgtgg atatggaaat tttactttag ctttagcgcc attctttttt
     7741 aaaattttag ccactgaaat ttcaaaaagc aatattaatt ttgctttaaa aaattgcgag
     7801 cttaacaata caacaaatat ccactttgca agactttcaa gcgaagaatt aagtcttgct
     7861 atcaaaaaag aaagagaatt ttttcgttta aaagatattc gattagatga ttttaatttc
     7921 tctcatgttt tagttgatcc accccgtgca ggacttgata aaagcgtaat tgacttaata
     7981 aaaaaatatg gaaatattat ttatatttct tgcaatccta tcactttaaa agaaaattta
     8041 aaagaattaa gcctaacaca tagagtggaa gagtttgctc tgtttgatca atttgtcaat
     8101 actccacatc ttgaatgtgg agtatttctt agcaaggtat aaaaaaataa ttcattaatt
     8161 tagccagtat tactatcgcg atacaaagca caaatacaaa agggtggata aaaacaccga
     8221 gtggattttt cttctttaat ataaaatgac aaaataaaga aaaaacaact aaagataaaa
     8281 ttccaaaagc caaaataatt tttacagcaa aaagtaaatt taaaggttta aaatgaaaac
     8341 ctgccaaagc acctccactt aaaaaaagca aaagaacaac aaaaggcatt attttaactc
     8401 cagtagcact aaaaagactt ttgtcaaaat taggattttt ctttttaact acacccaaaa
     8461 caaatacatc aacaaacaaa taacctataa acaaaatagc acaaagaaga tggattgtta
     8521 aagtatatgg ataaaattct tccatttttc cctccttatt aaacttcgga atttgctata
     8581 ttataacact tttttcattt tttgaattca ctttagttaa ttttttaatc atttaagata
     8641 aaataccaaa acaaaggtta acaatgaacg aaaaagaaac tatctcttat attataaata
     8701 caagtaaaaa tattgtcata tttgctttaa gtccagataa gacaaaagct tcttataggg
     8761 tagcagaatt tttacaaaga aaaaattata aaatttttcc tatttatcct aaagaagagt
     8821 ttattttaaa tgaaaaagtt tatagaaatt tagatcaaat agaagaaaaa atcgatacac
     8881 ttatactttt tagaaaaggt gaagtggcgc tagaaattct tcctaagctt gttgaaaaaa
     8941 atattaaaaa cctatggctt caacttgata ttagtaatga aacagccaaa gaagaatgta
     9001 aaaaattaga tataaatttt atacaaaatc gttgcattat gctagaatat ccgcatttta
     9061 aaacaaagga aaaatagtgt tagagcttaa taaaatttac aaagcaaaac aacaaatttc
     9121 aggatttgta aacaaaactc ctttcatata ctcttctttt ttaagtgata tttgtcaaag
     9181 tgagatttat cttaaaaatg aaaatttaca aattacaggt gcttataaaa ttcgtggagc
     9241 ttacaataaa atagccaatc ttagcactga acaaaaacaa catggagtca ttgcagcaag
     9301 tgcgggaaac catgctcaag gcgtggccat tagtgcaaaa aaatttagca ttaaagcagt
     9361 tatcgtaatg ccagaatcca ctccactctt aaaagtttct gctacaaaag ccttaggagc
     9421 agaggtgata ctcagaggag ataattttga tgaagcctat gcttttgcaa cctcttatgc
     9481 taaagaaaat aatcttagct ttatccatcc ttttgaagat gaatttgtaa tggcaggaca
     9541 aggaacttta atgcttgaaa tgcttgatga aataagcgat cttgatatga ttattgcacc
     9601 tgttggaggc ggaggactta taagcggtat ctcaagtaca gctaaacaaa tcaatcctaa
     9661 cattaaaatc atcggagttg gagccaaagg agctcctgca atgtatgaaa gttttcatgc
     9721 taaaaaaatc aaaaatgcaa aaagcgtacg cactatagcc gatggtattg ctgtgcgtga
     9781 tgcaaatcct attaatttta atattatttt agaatgcgta gatgatttta tccaagttga
     9841 tgatgaagaa atcgctaatg cggtattgtt tttacttgaa aaacataaaa tcatagttga
     9901 aggtgcagga gctgcgagtg tagctgccct gcttcatcaa aaaataaata cacaaaatca
     9961 caaaaaaatt ggcgtagttt taagcggagg caatatcgat gcacaaatgc taaatatcat
    10021 catagaaaaa ggtttattta aatcctatag aaaaatgcaa attcatgtta ctttagtaga
    10081 taaacctggg gcattattac accttacaga tagcttaaaa atagccaatg ccaatatagt
    10141 aaaaatcgac tatgatagat tttctaccaa gcttgattat ggcgatgcga tgatttcaat
    10201 tactttagaa accaaaggca aagaacatca agaagaaata agaaaaattt taacccaaaa
    10261 ggcctttaat ttctatgaaa gtttttaata acatatacgg cttaaataaa gcccatttgg
    10321 cggtgctaaa aagtgattgt attgcttttt ggcctcaatc tgttctttga gttctttttc
    10381 actcattttt ccttctaaaa cctttaaaac acttgctacg cttaatctaa tttgccctct
    10441 taaaaaacca ttagctttaa aatgaaaaat gctaaaatct ttataagcat aagctctagc
    10501 aataaaaatt tctcttaaag tcgttttatt atctcctcca cttttgcaaa aaaactttaa
    10561 atcctttttt cccacaaaaa aacccaaaag ctcattagcc ttatctaagt caaatttagg
    10621 ataaaaatgt acataagaag ccataaaagg actataagaa gagtgagaaa atatatagcg
    10681 gtattctcta ctttttacat caaatcttac ttcaaaatca tcttttactt tttcaatttt
    10741 tttgatatgg ataaaaggat gggaaaattt attaagctgt ttttgaagat attctaaatt
    10801 tacaaaatga tctccacact ccacactagc tacagcatag cttgcatgca ctcctttatc
    10861 tgtacgagaa gccatcaaaa gaggtgaaac aatacccaaa tgcgataagg ctccacttaa
    10921 agcatcttga acaccttttt tatgaggctg agtagcagaa cctaaaaaag cagagccatc
    10981 ataagaaaat ataattttta ttttcatcaa taacgactca aaatcatttt cttaaaacaa
    11041 taagccgaaa taaataaact taaagaaaaa attccaaggc aagccaaaat tggaggttga
    11101 gaaaaagaac ttaaaagtcc aaaatatata gcaatcactc caaacatacc taaatacaca
    11161 tagccttttt cataacgata agtaaccaaa ccaaaacaaa gcgcaaaaag cgtactagca
    11221 agtggaaaca aggctatagt tgtataaatc acaaattctc ttgctctttg tggattttcg
    11281 tttaaatcat tccagtattc ataaaatttc tttgtttgaa gattgtctgt attaaactga
    11341 gtatttacta ctaaagtgtc aaattctcca ctaaaaatac tttgaccttg ctcaaaatta
    11401 tacattttgc cttgattcaa gctaaaagca aaactatcat cttttctttg cacatgcgct
    11461 tctttggcta tgataagttg ttctttatca tctgctttat gtttagggcg atacataatt
    11521 atgttttcat acttatcact atcttgtttt tctataaaaa tcatccagtc taaaaatttt
    11581 tgtccaaatt ctcctgtttt gtagttaaat ttcacttgag tgcttttata gtttacaaag
    11641 ttatcctgaa gttcaaatac tataggtatc attaccaaag ccacaacaag cataaaagca
    11701 ctaatcaagc ttgcaatttt aaggaaaaat tttgccaaaa tcattggtga aaatcccaaa
    11761 gtaaaaagta ctatgctttc attttcctta gaaagcctaa acaaagccaa agttaaagaa
    11821 ataaaaaaag atataggcaa ggtaaaaatt aaaattctag gcaacataaa cccataaagc
    11881 tttaaaagat ccaaaaaact aatctctatg cttgaagtaa gttttgcaag ttgaataaaa
    11941 aacaccatag atacaatagc aaaaagtacg aaaaatatag acaaattcgt acttaaaaat
    12001 tgatttaaaa catatcttaa actaagcttc attagaataa tcctaagttt ttataaaata
    12061 aaactgccac aaaagcgata tttaaaaagg gtatcatagc aagttcttgc tcttttattg
    12121 ctttaatttt aaaaaaaata aaaaaaggca aagttaaaat agaagctata agtaatacta
    12181 aaaatccata ctcaaaacct aaaattccac ctatacaaga cataataata atatcagcat
    12241 cacccaaatt ttctaaaatt tcatcttttt tttggaaatt cattagaaaa aaaaccaaac
    12301 tttttaataa aaaaacaaat cctccaaaac taaaagcatt tagtaaaaaa cctccactaa
    12361 actctttaaa aatcaaaaaa tgtaaaattt cactttccct aaaggcgtaa aaaaaagcaa
    12421 ataaaaaagc actccaaagt aaaatttgtg gtacggcttt gagtttaata tcaatcaaag
    12481 aaagtaaga
//
LOCUS       DAPIYB010000052        12373 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.053, whole genome shotgun sequence.
ACCESSION   DAPIYB010000052 DAPIYB010000000
VERSION     DAPIYB010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12373
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.053"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            1..1537
                     /gene="kdpA"
                     /locus_tag="RJ318_001165"
                     /pseudo
     CDS             1..1537
                     /gene="kdpA"
                     /locus_tag="RJ318_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305525.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit A"
     gene            1547..3588
                     /gene="kdpB"
                     /locus_tag="RJ318_001166"
                     /pseudo
     CDS             1547..3588
                     /gene="kdpB"
                     /locus_tag="RJ318_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344096.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
     gene            3590..4112
                     /locus_tag="RJ318_001167"
                     /pseudo
     CDS             3590..4112
                     /locus_tag="RJ318_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246928.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit C"
     gene            4189..6009
                     /locus_tag="RJ318_001168"
     CDS             4189..6009
                     /locus_tag="RJ318_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HDV7431036.1"
                     /translation="MQRQSPEQILKKLEVKAKEEEKNKLVKLKIFLGYAAGSGKTYAM
                     LSEARTLRDNGVDVVLGYIEPHDRPETMALAQGFESIANLEIPYKNIVLKEFDLDATL
                     KRKPALVLVDELAHTNAKGLRNEKRFQDIEELLKAGIDVYTTLNIQHLESLNDLVANI
                     SKIEVKERIPDRIFDEADQVELVDIEPNKLLKRMQDGKIYKEKQAKLALENFFRQERL
                     IALREIALRRLASRVNLRASEQRLINDDLAYHTGEHILVCINASNAKVIRAAARLALA
                     FHAKLSALYIKNPNIKEAKALEENIELAKSFDAKIISVYDDIARQIAEYSSLSNVSKI
                     VLGKNKDKKSLKKRFLKLSLKKHPILIYILSMKIKFLLLKYEVKKSFDFLGFLKITGV
                     LLLATFIAFVFHKFNTQPSNMVMIFILAVFASSFISDNKIFAFYSSLVSVLIYNFFFL
                     EPIFSLKVHDSGNIITFTTMFIVGFLTAVFTRRLKLQSKELTKRAYRTAILLENSENL
                     ARVKSKQELWEQLGNQALKLLNLPIIIYPINKNNILSKPLLFFNDDKQMLKNCFSADE
                     IAIAQWVATNKERAGVCTNTLPNANAMYLPIEDGKKLKGL"
     gene            complement(6111..8084)
                     /gene="uvrB"
                     /locus_tag="RJ318_001169"
     CDS             complement(6111..8084)
                     /gene="uvrB"
                     /locus_tag="RJ318_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HDV7431037.1"
                     /translation="MLELTSEFKPSPDQQEAIKGIVKSIKKGNKYQTLLGVTGSGKTF
                     TMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSKNHVEYFISYYDYYQPEAYIPRT
                     DVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
                     GMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDEL
                     DAMYHYNVLENKKGKDLKRFILYPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENK
                     LVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPYTLFDYFAIKNRKFL
                     VIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKNCQFLFV
                     SATPAPLELELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVL
                     VTVLTKKLAEELTRYYLELGIKVKYMHSDIDAIERNEIIRGLRSGAFDMLIGINLLRE
                     GLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKSMQEAMD
                     TTNERRKLQMAYNKKYNITPTSVKRHIEESLKNEEDLGEIYRKGKKLEKMPASERAKL
                     AKELRKQMLEAAKALEFEKAAAIRDEINKLRDL"
     gene            8238..8468
                     /locus_tag="RJ318_001170"
     CDS             8238..8468
                     /locus_tag="RJ318_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431038.1"
                     /translation="MFDEKIINTMTDKVNELIEKYNEVCEANEALRNELVSVKAQNEA
                     KSNQIMRLEEELKSRNIESEDIYKKIEAVLGR"
     gene            8458..8700
                     /locus_tag="RJ318_001171"
     CDS             8458..8700
                     /locus_tag="RJ318_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431039.1"
                     /translation="MADNLKQVIVNVNAKDFIVKCSEEFANFLEDDIALISGGTKKIE
                     LKRFVDAFVKKSYENYILERELKKLIKAINEELPTK"
     gene            8697..9134
                     /locus_tag="RJ318_001172"
     CDS             8697..9134
                     /locus_tag="RJ318_001172"
                     /inference="COORDINATES: protein motif:HMM:NF019575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDV7431040.1"
                     /translation="MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDY
                     EMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEKLFYCLNDCDYSLLDTPIYSDFK
                     SWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI"
     gene            9116..10969
                     /locus_tag="RJ318_001173"
     CDS             9116..10969
                     /locus_tag="RJ318_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDV7431041.1"
                     /translation="MQRSDIRYYELAICGLYLDNLTFHSFDEIKPLTQVLVDLKSKKN
                     LKAIVLKECQKPDFKTIEIKEITGYFLTPLQLELANFIVYYYASKLGFVLGFFETSPK
                     YECQKMFFKDTPKLSNQQQNALSFLQKENNSLLFADTGSGKTEIYISLIKECLEQGKQ
                     ALLLMPEIALTPQMQKRLEVYFKDNFFLWHSKISKKKKQEYLECFCKGEVLLVAGARS
                     ALFLPFRNLGLIVVDEEHDNSYKASNQPFINARDLALFLGQKNNIKVVLGSATPSLTS
                     FYKQKSFRLKGTFFESKKHFLYDENELGITPMLLSELEKSLKHQKQAIVFLPTRANFR
                     QIICKDCGETIKCPFCSIAMSMHKKKNVLKCHYCNYTSLIEQNCPSCKGEMLEARKMG
                     TAELLELLQNALPLAKIAKFDSDEITSVKKLNTILKDFNENKIDILIGTSMLAKGHDY
                     HSVDLSVILGLDEYLLRPSFRASEETLALAMQVAGRAGRKGEARVLLQTKNRAFFERY
                     IENYDAFLKDELENRKDLYPPFKRLLRVLIEDKDQKSAQKLCEKFASQFRNIKQVELV
                     GYGICGVEMLYGKYRFYLLLRSENHKALVAIENYILQFKNASADIDPIDFV"
     gene            complement(10979..12373)
                     /locus_tag="RJ318_001174"
                     /pseudo
     CDS             complement(10979..12373)
                     /locus_tag="RJ318_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109180.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
BASE COUNT         4197 a         1633 c         2151 g         4392 t
ORIGIN      
        1 ttaataacac tgattatagc ttttatattg gctttaattt ttggaaatta tctttataaa
       61 attgcaagct gtaaaaaaac tatttttgat tttattttta atccaattga taacttaatt
      121 tataaaattt gtgcaattga tagaaaaaat atgacttggc aaaaattatt ctttgcattt
      181 aattgctttt aatgccttag tggctatttt ttctttcgtg attttttatt tacaagataa
      241 acttttttaa atcctaattc gatagattct atgaaagggg atttgaattt aaacactgta
      301 attagtttta ctacaaatac aaaccttcag cattatagtg gagagagtgc tttaagtttg
      361 ctttcccaaa atacaggcat tttacttgct atgtttgttt caagtgcaag tggatattct
      421 gcttgtatgg ctttttgtcg tgctttatgt ggtatgcaaa tgggaaattt ttatgaagat
      481 tttgcgcgta ttattacgcg tttgatgttg cctttaagtt ttattttggc tgtaattttt
      541 atctctgaag gcgtggtgca aaattatcac gcaaatttta gcgtgcttac tttagaaaat
      601 aaatttcaaa gcattgccac aggtcctgtt gcagctcttg agtctataaa acatttaggg
      661 gcaaatgggg gtggtttttt tggtgctaat tcaagcatgc cttttgaaaa tcctacttta
      721 cttacaaatt ttttgcaaat tttatccatg atgcttattc ctagtgcctg tgttgtagct
      781 tttggattga tggtttatca tagaaaagaa atacaaggtt ttgctcttat gggaaaagaa
      841 gggggagtta tttttggtgc aatggggatt atttttatca tttctttgct tttaatttat
      901 tttagcgaaa aaatgtcaaa tccaaatttg gattctttgg gtttaaatac aaatttggga
      961 aatttggaag gtaaagaaat aagatttggc acagatggtt cgagtttatt tagtgctgta
     1021 actactgctt ttactacagg aagcgtcaat aatatgcacg atagtttaat ccattaagta
     1081 tcagtgctac tttgctaaat atgatgctaa atgtagcttt cggtggcgaa ggagtagggc
     1141 ttatgaatat gattatttat gtgctcttaa ccgtgtttat ttgtgcatta atgataggta
     1201 gaactccaga attcttgggt aaaaaaatag aaagcgcaca aatgaagctt atagctttgg
     1261 taattcttat ccatccttta ttaatccttg ttttaagtgc attagctgtt gtttttgcaa
     1321 aagatagtat aagcaatcct agctttcatg gcttggctca aaagctggat cgcttttggc
     1381 taaaaataca caagaaaata ctgcaaattc tttaaaaacg gataatttaa cttttatgtt
     1441 tgtgcttgtt tgtattatat atatttttgc tgcacttact ttttttccag tgcttacttt
     1501 atcaagcgtt gcagaatgtt tatctttatg gcattaagga gagtcaatgt ctaaaaaaca
     1561 aaataaactc attgcaaaag aaattttaaa taatgccata aaaggagcat ttttaaaatt
     1621 tgatccacgc tttatggtaa aaaatcctgt tatgtttatg gtggaagttg gatcgattct
     1681 tactttgatt ttaagtattt ttcctacttt gtttaatgga aattctgatg aaagaattta
     1741 taacatctta atcactttta ttttatttat aaccttgctt tttgcaaatt ttgcagaaag
     1801 tattgcagaa ggaaggggta aagcccaagc agctacctta agacaaagca aaaaggattc
     1861 taaagctaga cgcataaaaa gtgatggcag tgaagaaatg cttaattcta gtgagctaga
     1921 aataggtgat atagttttag ttaaagcagg tgaacttata cctaatgatg gagaaattat
     1981 agaaggtgct gcaagtgttg atgaatcagc tattacaggt gaaagtgcac ctgttatgcg
     2041 tgaagcgggc ggtgattttt cttctgttac aggtgggact acggttttaa ctgatttttt
     2101 aaagattaaa attttagttg gagctgggga aagtttttta gataaaatga tcaatcttgt
     2161 agaaggtgct gcgcgtcaaa aaactccaaa tgaaattgct cttaatactc ttttaattgt
     2221 gcttagtttg agttttctag tagtggttgt aagtttatat ccttttatgc aatttttagg
     2281 cgtgagtttg cctatttcgt ggttagtagc attgcttgta tgtcttattc ctacaactat
     2341 agggggactt ttatcagcta taggaatagc aggtatggat agggtaacgc gttttaatgc
     2401 gatcgcactt tcaggcaagg ctgttgaaag ttgtggtgat gttgatacta tgattttgga
     2461 taaaacagga acgattactt ttggaaaccg tttggcaaat gaattttatg aagtccaagg
     2521 tataagtaaa gaagaaatga ttaaagcttg tgttttatcc tctttaaaag atgaaactcc
     2581 agaaggtaaa agcatagttg cattggctca aaaaatgggt tatgaattag aaggtaatga
     2641 tattaaagaa tttatcgaat ttagcgctca aaatagaatg agtggtgtgg atttgcaaga
     2701 taatacaaaa attcgcaaag gtgcttttga tgctataaga gcttatataa gcgaaatgaa
     2761 tggaaaaatt cctagcgatt tagaaactaa ggtaatggaa atttcaaatc ttggcggcac
     2821 tcctttggta gtgtgtaaaa atgaaaaaat tttaggagta atttatctaa aggatacagt
     2881 aaaaccagga cttaaagagc gctttgatga gcttagaaaa atgggcataa aaactttaat
     2941 gtgtatcgga gacaatcctt taacagcagc tactatagct aaagaagcag ggcttgatgg
     3001 atttatagca gaatgcaagc ctgaagataa aatggaagcc attaaaaaag aacaagccca
     3061 aggtaagata gtagccatga caggagatgg aaccaatgat gctccagctc ttgcacaagc
     3121 tgatgtaggt atagctatga actcaggaac tcaggcggcc aaagaagcag ccaatatgat
     3181 agatcttgat tctaatccta ctaaaatttt agaagtagtt gaaataggaa aaggtttgct
     3241 tattactagg ggtagtctta caacttttag tatggcaaat gatctaagta ttttgctatt
     3301 ttacctgcta tgtttagtgt ggttttacct caaatgcaaa ttttaaatat tatgcatttg
     3361 gctaccccgc aaagcgctat tttatcagca cttattttta atgctattat tatacctttg
     3421 cccataccta ttgctatgcg tggagttaaa tttaagccta tgaaaagtga gcatttgctt
     3481 ttaagaaaat tgagtattta tggtttaggt ggtatgatag caccttttat agggataaaa
     3541 ataattgata ttcctacagc ttggatactt agaattttag gagtgtgata tgcttagaac
     3601 tttgtttagt ttttttgtgg taatgctaat attgtgtact cttgtttatc cttttgcttt
     3661 aaatacagtt gcaaaattta tttttcctta tcaatcaagt ggaagtttag tggataaaga
     3721 aggtcgtccg actttggatg taagcaaagc ggtaggttca aagcttttgg gtcaagattt
     3781 taataaacct tattttctac attcaagaac atctgtgtca aattacaata caagcgatac
     3841 aaatgaaagc agtgtaagtt caggtggatt taattatgct atgtcaaatc ctgctttaaa
     3901 agagcgtgtg caaaaatatt tgcaaaaatt tttagatgaa aatccgcaaa ttacaaaaga
     3961 acaaattcct ttggatttca ggatcaggtc ttgatcctca tatcagtctt caagcagccc
     4021 tagtgcaaat tcctaggata agtcaatctt caaaaatcac caaagaagaa ctagaaaaaa
     4081 tcattcaaga aaatactgag tctaaatttt agggattttt ggggaagaaa aggttaatgt
     4141 tttagctgtt aatatagcta ttgctaaagc catgaaaaaa gaataaacat gcaaagacaa
     4201 agtcctgaac aaattcttaa aaaacttgag gttaaagcta aggaagaaga aaaaaacaaa
     4261 cttgtaaaat taaaaatttt cttaggttat gctgcaggtt ctggaaaaac ttatgctatg
     4321 ttaagtgaag ccagaacttt aagggataat ggagttgatg ttgttttagg ctatatagag
     4381 cctcacgata gacctgaaac aatggcttta gcacaaggtt ttgaaagtat agctaatctt
     4441 gaaattcctt ataaaaatat agtattaaaa gaatttgatt tagacgctac ccttaagaga
     4501 aagcctgctt tggttttagt agatgagctt gcacacacta atgctaaagg cttgcgtaat
     4561 gaaaagcgtt ttcaagatat agaagaactt ctaaaagcag ggattgatgt ttatactact
     4621 ttaaatatac aacatttaga aagcttaaat gatttagtcg ctaatatcag taagatagaa
     4681 gttaaagagc gtattcctga tcgtattttt gatgaggctg atcaggttga acttgttgat
     4741 attgaaccta ataagctttt aaaaagaatg caagatggta aaatttataa ggaaaaacaa
     4801 gctaaactag cacttgaaaa tttctttcgc caagaaagac ttatagcttt gcgtgagatt
     4861 gccttaagaa gacttgcttc aagagtgaat ttaagagcaa gtgaacaaag gcttattaat
     4921 gatgatttag cttatcatac tggagagcat attttagttt gtattaatgc ttcaaatgca
     4981 aaggttattc gtgcagctgc aagacttgct ttagcttttc atgctaaatt gagtgcgctt
     5041 tatataaaaa atcccaatat taaagaagca aaagccttag aagaaaatat agaactagct
     5101 aaaagttttg atgctaaaat cattagcgta tatgatgata tagcaagaca aattgcagag
     5161 tattcaagcc ttagcaatgt ctctaaaatt gttttaggca aaaataaaga taaaaaaagt
     5221 ttaaagaaga gatttttgaa gctgtcgcta aaaaagcacc cgatattgat ttatatcttg
     5281 tcaatgaaaa tcaaatttct actcctaaaa tacgaagtaa aaaaaagttt tgatttttta
     5341 ggttttttaa aaatcacagg agttttgctt ttagcaactt ttatagcttt tgtatttcat
     5401 aaatttaata ctcagccaag taatatggtt atgattttta ttttagcagt ttttgcttct
     5461 tcttttattt ctgataataa aattttcgcc ttttattctt ctttggtaag tgttttgatt
     5521 tataattttt tctttttaga acctattttt agtcttaaag ttcatgatag tggaaatatt
     5581 attactttta caaccatgtt tatagttgga tttttaacag ctgtttttac tagaagatta
     5641 aaattgcaat ctaaagaact cactaaaaga gcttatagaa cagctatttt gcttgaaaat
     5701 agtgaaaatt tagcaagagt gaaaagcaaa caagagcttt gggaacaact tggaaatcaa
     5761 gctttaaaat tattaaattt gcctattatt atttatccta taaataaaaa caatatttta
     5821 tcgaaacctt tgttgttttt taacgatgat aagcaaatgt taaaaaattg ttttagtgct
     5881 gatgagattg ctattgctca atgggttgca acaaataaag aaagagcagg tgtttgtaca
     5941 aataccctgc ctaatgctaa tgctatgtat ttacctatag aagatgggaa aaaactaaag
     6001 gggttatagg tatagtttta aaagaaaaac gtcccttgca agactttcag tatgaaattt
     6061 taagtgcttt acttaatgag gcaggagtta gaacaaggga tatattttta ttataaatcc
     6121 cttaatttat taatctcatc tctaatagca gcagcttttt caaactcaag tgctttagct
     6181 gcttcaagca tttgttttct taactctttg gcaagtttag ctctttcgct agcaggcatt
     6241 ttttctagtt ttttaccttt gcgataaatt tcgcctaaat cctcttcatt tttcaaactc
     6301 tcttcaatat ggcgtttgac tgaagttggc gtgatattgt attttttatt ataagccatt
     6361 tgaagtttgc ggcgttcatt tgtggtatcc atagcttctt gcatggattt tgtaatcttt
     6421 ttgcaaaaaa gcaaaacctt accattgaca tttctagctg ctcttcccat ggtttggatt
     6481 aaacttgtag tgcttcttaa aaaaccttcc ttatctgcat ccataatggc aatgagtgaa
     6541 acttcaggca aatcaagtcc ttctctaagt aagttaatgc caattagcat atcaaaagca
     6601 ccgcttctta aacctcttat gatttcattg cgttctatag catcgatgtc tgagtgcatg
     6661 tatttgactt ttataccaag ctctaaataa taccttgtaa gttcttcagc gagtttttta
     6721 gtcagtacag ttactaaaac ccgttcgttt ctttgtatga cttttttagc ctcatcaaat
     6781 aaaatttcaa cctgattatc actatctttt aactctatta aaggatcaag cagtcccgta
     6841 ggacgcatga tttgatgaaa gatgttttct ttgctaagtt caagttctaa aggtgcaggt
     6901 gtggctgaaa caaaaagaaa ttgacaattt ttatggataa attcatcaaa cattaaagga
     6961 cgattatcca aggctgaagg caaacgaaaa ccataatcta ccaaggtttg ttttctgctt
     7021 ctatctcctg caaacatacc tctaaattgt ggtaaagata catggctttc atcgactata
     7081 acaagaaatt tcctattttt aatcgcaaaa taatcaaaaa gcgtataagg agtatcacct
     7141 tctttaagcc ctgttaaatg ccttgcatag ttttcaactc ctttacacat tcctgtgctt
     7201 gtaagcattt caagatcaaa ttcaaccctt tgtttaaggc gttgatattc tacgagttta
     7261 ttttcatgtt caaaataagc aaggcgttcg ttaagttctg cttttatgtc ttttatcgct
     7321 tgttttaatc ttgtttcgcc cacgctaaac tggcttgtag gatagagtat gaagcgtttt
     7381 aaatctttac cttttttatt ttctaaaaca ttgtaatgat acatagcatc aagctcatcg
     7441 ccaaaaaatt caagtcttac tacttcatct tcataataag ctggataaat atctataata
     7501 tctccttgaa ctctaaaatc tgcacgatca aaaaaattat catttctttt ataacccata
     7561 tctacaagtt tttttaaaag ttctttttgt gaaatttgca tacctagttc aaagattaaa
     7621 accatgccta tgtattcatt tggattacca agtccataat ttgccgaaac actagctatg
     7681 caaactacat cttcataact taaaagagaa gcagtagcgc tcagtcttaa acgctctaag
     7741 tcttcattag tggagctgtc tttttctatg aaaacatcag tgcgtgggat ataggcttca
     7801 ggttgataat aatcataata agatataaaa tattccacat gatttttaga aaaaaagcct
     7861 ttaaattcgc tataaagttg tgcacaaagg cttttgttgt gactcatgat aagagtaggc
     7921 atattaagtt ctttaatgac atttgccatg gtaaaggttt ttccgcttcc tgtaacgcct
     7981 agtaaggttt gatatttgtt gccttttttt atacttttta ctataccttt tatggcttct
     8041 tgttgatcag gactaggttt aaattcgctg gtaagttcta acatttttct actttatttt
     8101 tatttttgaa aaaattttaa aagaaaatgc tttaattaaa aattaattga caataaaaac
     8161 ctaaatttaa atttttttct gctacaatat caaataatat tttccataaa ttacaaattt
     8221 cttaagaagg caaaaatatg tttgatgaaa aaataatcaa tactatgaca gataaagtaa
     8281 atgaactcat tgaaaaatat aacgaagttt gcgaagccaa tgaggcttta agaaatgagc
     8341 ttgtaagcgt taaagcacaa aatgaagcaa aaagtaatca aatcatgcgt ttagaagaag
     8401 aacttaaatc tcgcaatata gaaagcgaag atatttataa gaaaatagag gctgttcttg
     8461 gcagataatc taaaacaagt cattgttaat gttaatgcaa aagatttcat tgttaagtgc
     8521 agtgaagaat ttgcaaattt tttagaagat gatatcgctt tgatttctgg cggtactaaa
     8581 aaaatagaac ttaaacgctt tgtagatgcg tttgttaaaa aaagttatga aaattatatt
     8641 ttagaaagag aacttaagaa actaataaaa gcaatcaatg aagaactccc gacaaaatga
     8701 ataaagcttt tactctgctt gagcttgttt ttgtgatttt gattttggga attttatcaa
     8761 gcttatcttt atcttttatc aatactacaa aagatgaggt taaaatttta aaattaaaaa
     8821 tggactatga aatgctaagc tcagctcttg ctttaatgcg tagtcaaatg agacttaaaa
     8881 atttaaattt tccagaaatt ttagataatg cgcaaaacaa tcaagccaaa gaaaaactct
     8941 tttattgttt aaatgattgt gattattctt tgcttgatac acctatttat tctgatttta
     9001 aatcttggat aaaaataggt aaaaatcact atagatttgc attaaatgcc aaagagatgg
     9061 ttgaatttat ttatgattct aaagaaggtt tgttaaagtg tataggaagt tctagatgca
     9121 aagatctgat ataagatatt atgaacttgc aatttgtggt ttgtatttgg ataatttaac
     9181 ttttcatagt tttgatgaaa tcaaaccttt aacacaggta ttagtggatt taaaatctaa
     9241 aaaaaatctt aaagccatcg tacttaaaga atgtcaaaaa cctgatttta aaactataga
     9301 aattaaagaa attacagggt attttctaac tcctttgcaa cttgaattgg caaattttat
     9361 tgtttattat tatgcttcaa aacttggttt tgttttgggc tttttcgaaa ctagtcctaa
     9421 gtatgaatgt caaaaaatgt tttttaaaga tacccctaag ctaagcaatc aacaacaaaa
     9481 tgccttaagt tttcttcaaa aagaaaacaa ttctttgctt tttgctgata cgggtagtgg
     9541 caagactgaa atttatattt ctttaataaa agagtgttta gaacagggta agcaagcttt
     9601 acttttgatg ccagaaatcg cacttactcc acaaatgcaa aagcgtttag aagtgtattt
     9661 taaggataat tttttcctgt ggcattctaa aatttcaaag aaaaaaaagc aagaatattt
     9721 agagtgtttt tgcaagggag aagtgctttt agtagcgggt gcaagatcgg ctttgttttt
     9781 accttttaga aatttaggac ttattgtagt agatgaagaa catgataatt cttataaggc
     9841 ttctaatcag ccttttatca atgcaagaga tttagcactt tttttgggtc aaaaaaataa
     9901 tattaaagtg gttttaggtt ctgcaacccc atctttaacg agtttttaca aacaaaaaag
     9961 ttttagacta aaaggaactt tttttgagag taaaaagcat tttttatatg atgaaaatga
    10021 gcttggtata acgcctatgc ttttaagcga attagaaaaa agtttaaaac atcaaaaaca
    10081 agctatagtg tttttaccta caagggctaa ttttaggcaa atcatttgca aggattgtgg
    10141 ggaaacgata aaatgtcctt tttgttctat tgctatgagt atgcataaaa agaaaaatgt
    10201 tttaaaatgt cattattgta attatacttc tttaatagag caaaattgtc caagttgcaa
    10261 aggagaaatg ttagaagcta gaaaaatggg gactgctgaa cttttagagc ttttgcaaaa
    10321 tgctttgcct ttagcaaaaa tagcaaaatt tgatagcgat gaaatcacaa gtgttaaaaa
    10381 gcttaatact attttaaaag actttaatga aaataagatc gatatactta ttggcacttc
    10441 tatgcttgct aaaggacatg attatcatag tgtggatttg agtgtgattt tagggcttga
    10501 tgaatatttg ttgcgtccta gttttagagc gagtgaagaa actttagctt tagctatgca
    10561 agttgcaggc agggcagggc gtaaaggcga agcaagagta cttttgcaaa caaaaaatag
    10621 agcttttttt gaaaggtata tagagaatta tgatgctttt ttaaaagatg agttagaaaa
    10681 tagaaaagat ctttaccccc catttaaacg ccttttaaga gttcttatag aagataaaga
    10741 tcaaaaaagt gcacaaaaac tttgtgaaaa atttgcttct caatttagaa atatcaaaca
    10801 ggtagaattg gtaggctatg gaatttgtgg agttgaaatg ctgtatggaa aatatcgttt
    10861 ttatttgttg cttagaagtg aaaatcataa agctttagtg gcaattgaaa attatatttt
    10921 gcaatttaaa aatgcaagtg cggatattga tcctattgat tttgtgtaag tgatatgatt
    10981 atttatcttt gtatattttt tcaaattctt tataatattt ccaagaatca ataatatgag
    11041 gatgtgtttg ttttaaatga tttagttcat tttcaaatat attaaaaaaa gtgtaaataa
    11101 gtgatttatt ttttataaaa taatctatta catctttttc tttcatcatt tttgattctg
    11161 tttcatctat ggttatttta atttgatata aaaaatcata caaataatgt ttaattgttg
    11221 aaaataaaag attgttttgt tctaattgct taaaatcatt tttatcaata tatacaccca
    11281 tatcattaca taggtcgttt tttataattt cttgtattat gtctattttt tcatgattga
    11341 tatgttttct gtctaaaatt atgggaatgc tagaagttct atcaatattg aaatttttat
    11401 tatttttagg agtattgaga taaaaggtgt tattaatatc tttagaattt gcataaagtg
    11461 taataggaaa aagatagcga atataacctc taaattcttt aattttaaat aaatctaatt
    11521 tatctttatg ggggggggat aaaattaaaa tttatagcaa gtaaattcat ggtatcgaag
    11581 gcctttgatt ggcggatttc ttccatatca agatagtata cattgtcttt gttaaaatat
    11641 tttaataaat aagagatgat aaaaactcct tgttgtagtt catttatatc gattttaatt
    11701 ttatgatttt gatgagtaag atagttgatg taataacgcc aatcataagt tagattaaat
    11761 tcagggggat agtttcttaa aactttactc caatctcttc cccagctatg ctttaaaagt
    11821 cctattggat ctcgaactcc gcaaataatc ttagaattaa aatctaataa agatagatat
    11881 ttatcaaaat aaggtagatt aatttctgat atattaatag catattgagc aattgtatta
    11941 tcatttagac acatgtaatt aatacaatat ctctctttgc tatcaggtgg taaaacccag
    12001 gaggcaaaac aagttacatc gcaacattga ttaaggtatc ttaaaaatgc tgctgctcca
    12061 acgccatgtg gagaaatata gataaattta tagtgtttag gtaggggtaa atttaaatcc
    12121 caagctaatt ctgcgcaatg tcgactagaa tctatttcta taaaattagg attgattaaa
    12181 ggtggataag gatgttttgt tgataaatat ctatccctaa attcgttaga attgagccaa
    12241 gtgcaaattg tttcaatatt tttcaaaaca aaggtaaaaa atttttcatt attcgaattt
    12301 tttaaagctt gtaaaagaat ttgagctagg gttggagtta ggttattttt tatatagagt
    12361 aaaagatttt gca
//
LOCUS       DAPIYB010000053        11784 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.054, whole genome shotgun sequence.
ACCESSION   DAPIYB010000053 DAPIYB010000000
VERSION     DAPIYB010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11784
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.054"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(84..908)
                     /locus_tag="RJ318_001175"
     CDS             complement(84..908)
                     /locus_tag="RJ318_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7431042.1"
                     /translation="MPQLSIIIPLFNSCNFISRALQSCINQTLKDIEILIIDDKSKDN
                     SLNMVLEFAKKDPRIKIFQNEENLGTFASRNLGVLHSSSDFIMFLDSDDFLTLDACKI
                     ALKEMKKGFDLLCFDAFVHRVKTKQFYRFKQDEFFNQKEFLEFLSKQRHFCWSVWAKC
                     FRKDIILKSFEKIKIDERLSYGEDVLFCYVYFMFCEKIAVFKTCIYHYEFNPNGRYEN
                     KNKEILWQNYQDKKKSNELVKKLCLNFKNNDFHKKLFEVLEKEEFDLQRRVDEARN"
     gene            967..1926
                     /gene="waaF"
                     /locus_tag="RJ318_001176"
     CDS             967..1926
                     /gene="waaF"
                     /locus_tag="RJ318_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HDV7431043.1"
                     /translation="MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTAL
                     FKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFAFRSAFSSKIILHILKTKQRYFF
                     DKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
                     SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCN
                     KTTIKTLCQNIAFCDLFITNDSGPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLV
                     HLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL"
     gene            complement(1907..2467)
                     /gene="gmhA"
                     /locus_tag="RJ318_001177"
     CDS             complement(1907..2467)
                     /gene="gmhA"
                     /locus_tag="RJ318_001177"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDV7431044.1"
                     /translation="MINLVEKEWQEHQKIVQASEILKGQIAKVGELLCECLKKGGKIL
                     ICGNGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVFSRQV
                     EALGNEKDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVP
                     SDDTARIQEMHILIIHTLCQIIDESF"
     gene            complement(2464..3849)
                     /gene="rfaE1"
                     /locus_tag="RJ318_001178"
     CDS             complement(2464..3849)
                     /gene="rfaE1"
                     /locus_tag="RJ318_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HDV7431045.1"
                     /translation="MLEFLSQQKPKILIIGDFMVDNYTWCDCSRISPEAPVLIAKTLK
                     EDKRLGGAANVYANLKSLGADVFALGVVGDDESGKFLQENLKGEFLIQKGRKTPFKNR
                     IMAHNQQVLRLDEEDISEILLENELIALFDEKIKDFKAVVLSDYAKGVLTPKVCKAVI
                     KKAKALNIPVLVDPKGSDFSKYSGATLLTPNKKEALEALKFENLEGENLEKGIKKLKE
                     DFSLRYSIITLSEAGIALFDEGLKIAPAKALEVYDVTGAGDSVIAVLAFCLANEIEIF
                     KACELANEAAAVVVSKIGSVSVSFDEIKSFKRVDFEKKIKSKEELLVLLKQNNKKIVF
                     TNGCFDIVHFGHIKYLDKAKRLGDVLIVGLNSDASVKRLKGESRPVNSEFQRACMLAA
                     FYFVDFVVIFDEDTPLELISFLKPDILVKGADYKDKLVVGADIVSRVELIDFEEGFST
                     SKIIEKIKDKK"
     gene            complement(3842..4795)
                     /gene="rfaD"
                     /locus_tag="RJ318_001179"
     CDS             complement(3842..4795)
                     /gene="rfaD"
                     /locus_tag="RJ318_001179"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HDV7431046.1"
                     /translation="MKIAITGGAGFIGSQLALNLQEKHEILIIDKMRSSATFENGNLQ
                     SFGHFKNLLEFDGELFAGDINDEKVLKKIEDFKPEIIFHQAAISDTTVFDQTKVLQTN
                     LNTFKDFIELSIDLNAKLIYASSASVYGDAKSPQTVGKDEEPKNPYAFSKLMMDKLAK
                     KYYDKAHLVGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFT
                     YIKDVISANLIALDSKCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSY
                     QFHTEAKLDQTWNYQPKFSLEEGIKDYLGEIKRLFEKEVNA"
     gene            complement(4796..5356)
                     /gene="gmhB"
                     /locus_tag="RJ318_001180"
     CDS             complement(4796..5356)
                     /gene="gmhB"
                     /locus_tag="RJ318_001180"
                     /EC_number="3.1.3.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-alpha-D-manno-heptose-1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HDV7431047.1"
                     /translation="MFIFFLKKLYYNVFMKTKALFLDRDGVINIDKKYVYKIEDFEFC
                     DGIFELCRYFLARNYLLFIATNQSGIARGYYKESDFFKLCDYMLKEFAKQDIKIDKIY
                     HCPHLEGCECRKPKAGMLLKAKDEFDLDMKNSIFIGDNLSDMQAGLNADIGTLILVNE
                     EKKEGDFFRQFKNLKEILNFFKEKDI"
     gene            5438..5740
                     /locus_tag="RJ318_001181"
     CDS             5438..5740
                     /locus_tag="RJ318_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HDV7431048.1"
                     /translation="MKKLLVVSALACLGVSAFAADGATLFKKCAVCHGANADKVYLNK
                     VPALKTLSSAERLQYMKEYSEGKRNAYGQGAIMKLNLKGLTEEDFKAIEAHIETLK"
     gene            complement(5763..5969)
                     /gene="ccoS"
                     /locus_tag="RJ318_001182"
     CDS             complement(5763..5969)
                     /gene="ccoS"
                     /locus_tag="RJ318_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HDV7431049.1"
                     /translation="MNSIIMMMIGVSILAFFIILATLLWGIKNKQFDDDYKFTTLNDD
                     EDSLRDTIELERRKKEALDKKRLS"
     gene            complement(5966..8323)
                     /locus_tag="RJ318_001183"
     CDS             complement(5966..8323)
                     /locus_tag="RJ318_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase
                     metal-binding domain-containing protein"
                     /protein_id="HDV7431050.1"
                     /translation="MIMKCEHCKLDYKQAQMIEYKGKIFCCKGCESVWEILHESGLDE
                     FYEKLGNQTLSPVNFQNEMKNYDEFITKTKEGFSEIYLMIHGIECAACVWLNEKILTK
                     QEGILELDINHLNHKARIVFDEQSISLVQILRLIESIGYKASAYDASKASKKADLLKR
                     EFYSKLVVAIACVMNIMWIAVAKYAGFFSGMDKDTKDILNFAEFILCSPVLFYTGSHF
                     YKSAFKTLNMHSLNMDVLVISGASLAYVYSLWAMFFRVGEVYFDSVAMIICFVFIGKY
                     LEMFSKKRALDTIDGLNDFLQNEVLVFDGKEFVSKEVQKVCLGDRILLKTGDKILIDG
                     ICKSGEMSVDTSSLNGENTPKLIQKEDEIFSACIVLDGSVEYEATKLYKDSKLSQIIQ
                     LLELASSKKAKLESLVNSLSAYFSRTVLLIAFICFAFWFFYKEESFEISLVNAIAVLI
                     IACPCALALATPVSNLVALGRALKKHILFKSSSVIEDLSKCDCVVFDKTGILTKIELE
                     LKEVFLDKALDLNELYNFVKLSKHPISQNIASYLKQKGAKDLNLDFKKLSSIQAKGLS
                     AELNEGLLLGGSSKFLQEKGIATKEFDNTHFIFAKEGKILAFFEFDSVLREGAKELIV
                     YLKKEKKELMILSGDHQKAVEKIARKLEIQNYQASCLPEDKMKTIENLSKNYKVLFVG
                     DGVNDALALKYASVSMTLREGSDLAIESSDVLLLKNDLLSLKKAIKLSKNTFKIIKQN
                     LAFSLFYNACTIPLAFLGMINPLFAAISMSFSSIIVVLNALRIKE"
     gene            8432..9730
                     /gene="rho"
                     /locus_tag="RJ318_001184"
     CDS             8432..9730
                     /gene="rho"
                     /locus_tag="RJ318_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDV7431051.1"
                     /translation="MEKEKKQHQRTHVPVEGYKIEELKLLDLENLVKIANECEIENPR
                     EFRRQELIFEILKAQTKKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQ
                     IKKFALRVGDIVTGQVREPKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTE
                     KIKLEYDAMKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELATAIAKNHPEMHL
                     IVLLVDERPEEVTDMQRCVKGEVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVII
                     LLDSITRLARAYNTATPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATAL
                     IDTGSRMDDVIFEEFKGTGNSEIVLDRNIADRRIYPAINIIKSGTRKEELLQGVANLQ
                     KIWAIRSAISQMDDVEALKFLYSKMLKTKDNVELLSIMNE"
     gene            9734..11263
                     /locus_tag="RJ318_001185"
     CDS             9734..11263
                     /locus_tag="RJ318_001185"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDV7431052.1"
                     /translation="MLQALAIKYRPKTFDELIGQKTVSVSLKYALNHNRLAHAYLFSG
                     LRGSGKTSSARIFSRALVCEQGPSDTPCGTCKHCLAALEGKHIDIIEMDAASNRGLED
                     IQALIEQTKYTPSMARFKIFIIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLK
                     LPATVLSRTQHFRFKQIPQSEILNHLKEILLKENVKFEEEALKFIARSGNGSLRDTLT
                     LLDQAIIFCQNEISISKITDMLGFLDPQKIKAFYQAILTKDKEKVFVYLEELQDYEAS
                     SVIDEMLFYLKESFFAKSTEFSTLIYERFFRILSKAKNMLCDDDGFTLCVMAFMMMEA
                     SHLKEIDAQIQEIKQENTTNIIPRITPSPIIPHLEKKTEKNAYEILLDSIYDRDFDLA
                     ECFKQSTNFISFENNTLNINSNAQGQNRDTLNKGFKLIQELFKAKFGENAKINVQKAL
                     TIDENKLQSLTQELPNNENKNIDIQSSINMLKEGAKKFDPQEDLKEALKDCFGEPSIE
                     N"
     gene            complement(11260..11487)
                     /locus_tag="RJ318_001186"
     CDS             complement(11260..11487)
                     /locus_tag="RJ318_001186"
                     /inference="COORDINATES: protein motif:HMM:NF021453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2165 family protein"
                     /protein_id="HDV7431053.1"
                     /translation="MFKARNLDAQSFHNAKIFWDYFFNLCILWFFAFQVVVAEWFGMW
                     MSKVWKGLPDTIRLVTYMFLALIFISLKNDD"
     gene            complement(11615..11752)
                     /locus_tag="RJ318_001187"
     CDS             complement(11615..11752)
                     /locus_tag="RJ318_001187"
                     /inference="COORDINATES: protein motif:HMM:NF021453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2165 family protein"
                     /protein_id="HDV7431054.1"
                     /translation="MIRFSKIIILLTVASLAGIVVFGNVTDYNSNFQFVSHGDEYGYK
                     A"
BASE COUNT         4205 a         2197 c         1504 g         3878 t
ORIGIN      
        1 aaccattatc tataaaagat tttatagata aaagctccat taaaccaata cctttataac
       61 ctctaggtgt ataccaaaaa ctactaattt cttgcttcat caacccttct ttgtaaatca
      121 aattcttctt tctctaaaac ctcaaacaac ttcttatgaa aatcattatt tttaaagttt
      181 aaacaaagct tttttacaag ttcattgctt ttctttttat cttgataatt ctgccataaa
      241 atttctttat ttttgttttc atatcttcca tttggattaa attcataatg ataaatgcaa
      301 gttttaaaaa cagctatttt ctcacaaaac ataaaataaa cataacaaaa aagcacatct
      361 tcgccataac tcaaacgctc atctatttta attttttcaa aactttttaa gataatatct
      421 tttctaaaac acttagccca aaccgaccag caaaaatgcc tttgtttgct tagaaattct
      481 aaaaattctt tttgattaaa aaactcatct tgtttaaaac gataaaattg cttggttttt
      541 accctatgta caaaagcatc aaagcaaagc aaatcaaaac cttttttcat ctctttaagc
      601 gctattttac aagcatcaag agttaaaaaa tcatcactat ctaaaaacat tataaaatca
      661 gaactagaat gcaaaactcc caaatttcta cttgcaaaag tgcccaaatt ttcttcattt
      721 tgaaagattt ttatccttgg atctttttta gcaaattcta aaaccatatt taaactatta
      781 tctttacttt tatcatcgat aatcaaaatt tcaatatctt ttaaagtctg atttatacaa
      841 ctttgcaaag ctcttgagat aaaattgcaa gaattaaaaa gcgggattat gatagaaagt
      901 tgtggcatat ttttcctaaa ttttgttaaa ataataaaaa caattctatc aaagtttagg
      961 aaatttatga aaatttttat acatcttccc acctggttag gcgatacggt aatggcttca
     1021 cctgctttat acactataaa agaacatttt aaagatgctc agtttatcct ttatggttct
     1081 tttgtttcta cagcactttt taaagaattt cctaattcta aaatcatcat agaaaataaa
     1141 ctatcccgtt ataaacaagc tctatcttta cgcaaagaac ttggtaaaat cgatcttagc
     1201 tttgctttta gatctgcgtt ctcttctaag attatcttgc atatccttaa aacaaaacaa
     1261 agatattttt ttgacaaaaa caagtacaaa gaagaacatc aagttttaaa atacctttat
     1321 tttatagaaa attcacttag tataaaagct cattttaagg acttaaagct tccctttaag
     1381 ctaaaatttc aaaaccctct tatcttaaga aatggtaaaa aaattctagg actcaaccct
     1441 ggtgcaagct ttggaagtgc aaaaagatgg gatgcgagtt attttgctaa agtggcttta
     1501 aatttcagcc aaagtcatga tattttaatc tttggtgcag gaaaagccga acaagaactt
     1561 tgtaatgaaa tttatcaaat tttaaaagaa caaaacataa aagtaaaaaa tctttgcaat
     1621 aaaaccacca tcaaaaccct ttgtcaaaat atcgcttttt gcgatctttt catcacaaat
     1681 gacagtggac ctatgcacct aagtgcggtt tataaggtaa aaaccgtagc tatttttggc
     1741 cctacgaaat ttactcaaac ttcaccttgg caaaatgaaa atgcaaaatt agtgcattta
     1801 gatctagctt gtatgccttg tatgcaaaaa acctgccctt taaaacacca caaatgcatg
     1861 aaagatctaa agcctgaaaa agtgatagaa caggctaaaa atttacttaa aaactctcat
     1921 ctatgatctg acaaagtgtg tgtatgatta aaatgtgcat ttcttgaatt ctagctgtat
     1981 catcgcttgg cacaacaaga ttatgatcac aaagcttatt catcattcca ccaccttttc
     2041 cgctaagccc tagacaaagc atattaagct cttttgcttt ttttaaagct tctaaaacat
     2101 tagggctttt tccgctcgtt gaaataccga ttaaaacatc cttttcattc cctaaagctt
     2161 ccacttgtct tgaaaaaaca aactcaaaac catagtcatt tcctatggca ctaagtgctg
     2221 aagtatcggt tgtaagtgct atgcctgcta aagccttgcg ttctttttta taacgcccgc
     2281 taagttcagc cgcaaaatgc tgagcatcag ccgcacttcc accgtttccg caaattaaaa
     2341 ttttaccacc ttttttaaga cactcacaca aaagctcacc tactttagcg atttgtcctt
     2401 ttaaaatttc gcttgcttga acaatttttt gatgttcttg ccattctttt tccactaaat
     2461 ttatcatttt ttatccttaa tcttttctat gatcttactt gtactaaatc cttcttcaaa
     2521 gtcgattaat tcaacccttg aaacgatatc tgcacctaca acaagtttat ctttataatc
     2581 agctccttta accaaaatat caggctttaa aaagcttata agttctaaag gcgtgtcttc
     2641 atcaaaaatc actacaaaat caacaaaata aaaagctgcc aacatacaag ctctttgaaa
     2701 ttctgaattt acaggacgac tctcgccttt gagtcttttc acactcgcat ctgagttcaa
     2761 acctacaatc aaaacatcgc ccaatctttt agctttgtca aggtatttta tatgtccaaa
     2821 atgcacgata tcaaaacaac catttgtaaa aacaatcttt ttattatttt gtttcaaaag
     2881 taccaaaagt tcttctttgc ttttgatttt tttctcaaaa tccacgcgct taaaactttt
     2941 aatctcatca aaactcacac tcacgctacc tattttactt accacaacag ctgcggcttc
     3001 attggcaagt tcgcaagctt taaaaatttc aatttcattt gccaaacaaa aagccaaaac
     3061 tgcgatcaca ctatcgcccg ctcctgttac atcataaacc tctaaggctt tagcaggtgc
     3121 gattttcaaa ccctcatcaa aaagtgcaat tccagcttct gaaagagtga tgatagaata
     3181 acgcaaagaa aaatcttctt ttaatttttt gatgcctttt tctaaatttt caccctctaa
     3241 attttcaaat ttcaaagcct ctaaagcttc ttttttatta ggcgtgagta aggttgcacc
     3301 gctatattta ctaaaatcac tgcctttagg atcaactaaa acaggaatat ttaaagcctt
     3361 agcttttttt atcacagcct tacaaacttt aggggttaaa acacctttgg cataatcgct
     3421 taaaaccaca gccttaaagt ctttaatctt ttcatcaaac aaagcaataa gctcattttc
     3481 aagcaaaatc tcacttatat cttcttcatc cagtcttaaa acctgctgat tatgcgccat
     3541 aatacgattt ttaaaaggag ttttgcgtcc tttttggatc aaaaattctc cttttaaatt
     3601 ttcttgtaaa aattttccac tctcatcatc gcccacaaca ccgagcgcaa aaacatcagc
     3661 tcccaagctt tttaaatttg cataaacatt cgcagccccg cctaatcttt tatcttcttt
     3721 aagagtttta gctattaaaa caggggcttc agggctgata cgcgaacaat cacaccaagt
     3781 gtaattatcc accataaaat ctcctataat caaaatttta ggtttttgct gacttaaaaa
     3841 ctcaagcatt tacttccttt tcaaaaagtc tttttatctc gcctaaataa tcttttatac
     3901 cctcttcaag gctaaatttt ggctgataat tccaagtttg atctagtttt gcttcagtat
     3961 ggaactgata agattttaca taaggatttg ggatatattc acaaggcaaa tcagtcttta
     4021 actctttttg caaaatatca actatatctt gaaaggttct tgctttacca ctgcctacat
     4081 tataaacccc acattttgaa tcaagggcga ttaaattagc actaataaca tctttaatat
     4141 aagtaaaatc cctataaatt tgatcacttc cttcaaacaa tcgtggattt tttcctgcta
     4201 aaatttgatg gccaaattgc aaaaccatag aagcggtttt gtttttataa aattcgcctt
     4261 ttccataaac attaaaatat ctaagtccta ctaaatgagc tttatcgtaa tattttttcg
     4321 ctaacttatc catcatcaat tttgaaaaag cataaggatt ttttggttct tcatccttac
     4381 ctacagtttg tggacttttt gcatcaccat aaaccgaagc tgaacttgca taaataagct
     4441 ttgcattaag atctatgcta agttctataa aatctttaaa agtatttaaa ttggtttgca
     4501 aaaccttagt ttgatcaaaa accgtagtgt ctgaaattgc tgcttgatga aaaataatct
     4561 ctggtttaaa atcttcaatc ttttttaaaa ctttttcatc gttaatatcg cctgcaaaaa
     4621 gttctccatc aaattcaagt aaatttttaa aatgcccaaa actttgcaaa tttccatttt
     4681 caaaagtcgc actactacgc attttatcga tgattaaaat ttcatgtttt tcttgcaaat
     4741 ttaaagctag ttgcgaacct ataaatcctg ctccacctgt gattgctatt ttcatttaaa
     4801 tatccttttc cttaaaaaag ttcaaaattt cttttaaatt tttaaattgt ctaaaaaaat
     4861 caccttcttt tttttcttca ttcactaaaa tcaaagtgcc aatatcagca tttaatcctg
     4921 cttgcatatc acttagatta tctccgataa agatagaatt tttcatatct aaatcaaact
     4981 catcttttgc ttttaaaagc atgcctgctt taggtttgcg acactcacaa ccttctaaat
     5041 gcggacaatg ataaatttta tcaattttta tatcttgttt agcaaattct ttaagcatat
     5101 aatcacaaag cttaaaaaaa tcactttcct tgtaatatcc tcttgcaatg cctgattggt
     5161 ttgtcgctat aaaaagcaaa taatttctag ccaaaaaata tctacaaagt tcaaaaattc
     5221 catcacaaaa ttcgaaatct tctattttat agacatattt tttatctata ttaatcacac
     5281 cgtctctatc taaaaataat gcttttgttt tcataaaaac attataatat agctttttta
     5341 aaaagaaaat aaacattatc tttaatttct taagattttt attaaaaata aagatatata
     5401 atacctagca atctaatttt tactaaggag aaaacaaatg aaaaaattat tagtagtttc
     5461 tgctttggca tgtcttggcg tttctgcttt tgctgcagat ggtgctacac tttttaaaaa
     5521 atgtgcagta tgccatggtg caaatgctga caaagtttac ttaaacaaag ttccagcttt
     5581 aaaaactctt tcttctgctg aaagacttca atacatgaaa gaatattcag aaggcaaaag
     5641 aaatgcttat ggtcaaggtg cgatcatgaa acttaacctt aaaggtttaa ctgaagaaga
     5701 ttttaaagct atcgaagctc atattgaaac tttaaaataa tttctaaaaa aggctttcct
     5761 ttttaagaaa gccttttttt atccaaagct tcttttttac gcctttctaa ttctatagta
     5821 tcacgtaaag aatcctcatc atcatttaaa gtagtaaatt tataatcatc atcaaattgt
     5881 ttattcttaa tcccccaaag caaagttgcc aaaatgataa aaaacgctaa aatagaaacc
     5941 cctatcatca tcatgattat actattcatt ctttgatcct taaagcattt aaaacgacta
     6001 ttatactact aaaagacata gaaatagcag caaataaagg atttatcata cccaaaaaag
     6061 ccaaaggtat ggtacaagca ttatagaaca aagaaaaagc aaggttttgc ttgataattt
     6121 taaaggtgtt tttagataat ttgatggctt tttttaaaga aagcaagtcg tttttcaaaa
     6181 gcaaaacatc actactttct atagctagat cacttccttc tcttaaagtc atcgaaacgc
     6241 ttgcgtattt taaagctagt gcgtcattta ccccatcacc tacaaacaaa actttgtaat
     6301 ttttgcttaa attttctata gttttcatct tatcttcagg caaacaagaa gcttgataat
     6361 tttgaatttc taattttcta gctatttttt ccactgcttt ttgatgatcg ccactgagta
     6421 tcattaattc tttcttttct tttttaagat aaacgataag ctcttttgca ccttctctta
     6481 aaacactatc aaactcaaaa aaagctaaaa ttttaccttc cttagcaaaa ataaaatgag
     6541 tattatcaaa ttccttagtt gcaataccct tttcttgcaa aaatttagaa cttccgccta
     6601 aaagcaaccc ttcatttaac tcagcactta aacctttagc ttgaatgctt gaaagttttt
     6661 taaaatccaa atttaaatcc ttagctcctt tttgctttaa atacgacgca atattttgag
     6721 atatgggatg tttagaaagt tttacaaaat tataaagctc gtttaaatca agcgctttat
     6781 ccaaaaaaac ctctttaagt tcaagctcta ttttggttaa aatacctgtt ttatcaaata
     6841 ccacacaatc acatttgctt aaatcctcta tcacgctaga acttttaaat aaaatatgtt
     6901 tttttaaagc tctgcctaaa gctacaagat tgctcacggg cgttgctaaa gccagagcac
     6961 aaggacaagc gataatcaaa accgcaatcg cattgactaa agaaatttca aaactctctt
     7021 ccttataaaa aaaccaaaaa gcaaaacaaa taaaagcgat caataaaacc gttctggaaa
     7081 aataagccga aagactattg accaaacttt caagttttgc ttttttagaa cttgcaagtt
     7141 ctaaaagctg gataatttga ctgagttttg aatctttgta aagctttgtt gcttcatact
     7201 ccacacttcc atcaagcact atacaagctg aaaaaatttc atcttctttt tgtatgagtt
     7261 ttggggtatt ttctccattt aaagaagagg tatccacgct catttcacca cttttacaaa
     7321 tcccatcgat taaaatttta tctccagttt taagtaaaat tctatctccc aaacaaacct
     7381 tttgcacttc tttggaaaca aattctttac catcaaaaac caaaacttca ttttgcaaaa
     7441 aatcattaag cccatctatg gtatctaaag cacgcttttt actaaacatc tcaagatatt
     7501 ttcctataaa aacaaagcaa attatcatcg ccacggagtc aaaatacacc tcccctaccc
     7561 taaaaaacat agcccataaa gaataaacat aagccaaact cgctccgcta atcaccaata
     7621 catccatatt taaactatgc atgtttaaag ttttaaaagc gcttttataa aaatgagatc
     7681 ccgtataaaa aagcacagga gaacaaagga taaattcagc aaaatttaaa atatccttag
     7741 tatccttatc cataccgcta aaaaatcctg cgtattttgc cactgctatc cacatgatat
     7801 tcatcacaca agctatagcc acaacaagct tagaataaaa ttcccttttt agcaaatccg
     7861 ctttttttga agccttgctc gcatcataag cactcgcttt ataacctatg ctttcaataa
     7921 gtcttaaaat ttgcaccaaa gaaatgcttt gctcatcaaa aacaatacgt gctttatggt
     7981 ttaaatgatt gatatcaagt tctaaaattc cttcttgttt ggttaaaatt ttctcattaa
     8041 gccacacaca agctgcacat tctataccgt gtatcatgag ataaatttca ctaaatcctt
     8101 ctttggtttt agtgataaac tcatcataat ttttcatttc attttgaaaa tttacagggc
     8161 ttaaagtttg atttccaagc ttttcataaa actcatctaa tccactttca tgcaaaattt
     8221 cccaaacgct ctcacaacct ttacaacaaa aaattttacc cttatactct atcatttggg
     8281 cttgtttata atcaagtttg caatgttcac atttcataat cattctttaa aaaaatattt
     8341 tttataatta taaacaaatt tgacaaaaag tgcatttttt tattaaaatc acattttaca
     8401 aaaattattc tgctaaatct tacgaggact tatggaaaaa gaaaaaaaac aacatcaaag
     8461 aacccacgtt ccagtggaag gttataaaat cgaagaatta aaattattag atttagaaaa
     8521 tctagttaaa atcgctaatg aatgtgaaat cgaaaaccca agagaatttc gccgccaaga
     8581 acttattttt gaaattttaa aagcacaaac aaaaaaaggc ggttttatac tttttacagg
     8641 gattttagaa atttcttccg aaggttatgg ctttttaaga ggtatggact ctaatcttag
     8701 cgatagtgtt aatgacgctt atgtttcaaa ttcacaaatt aaaaaatttg ctctgcgtgt
     8761 aggcgatatc gttacaggac aagttagaga accaaaagat caagaaaaat actacgctct
     8821 tttaaaaatc gaagcgatca attatctgcc tttacaagaa gccaaagaaa gacctttgtt
     8881 tgataactta acccctattt ttccaacaga aaaaatcaaa ctcgaatacg atgcaatgaa
     8941 gcttacaggt cgtgttttgg atctttttac tcctatagga aaaggacaac gcgggcttat
     9001 cgttgctcca ccacgcacag gtaaaacaga gcttatgaaa gaacttgcta ctgctattgc
     9061 aaaaaaccac ccagaaatgc atttaatcgt acttttagtc gatgaaagac ctgaagaagt
     9121 taccgatatg caaagatgtg taaaaggcga agtttttagt tctacttttg atttacctgc
     9181 ttataatcat gtgcgtgtag ccgaactcgt gatagaaaaa gccaaaagaa tggtagaaac
     9241 aggcaaagat gttatcatct tacttgatag tatcacaaga ctggcacgtg cttataacac
     9301 cgcaactcca agcagtggaa aagtcctaag cggcggggtg gatgctaatg ccctacacaa
     9361 accaaaacgc ttctttggtg cagctagaaa tatagaaaat ggaggctctt taaccatagt
     9421 tgctacagct ttaattgata caggttcaag aatggatgat gtgatttttg aagaatttaa
     9481 aggcacagga aatagcgaaa tagttcttga tagaaatatc gccgatagaa gaatttatcc
     9541 tgcgattaat atcatcaaat caggaacaag aaaagaagaa ttgctccaag gcgtagcaaa
     9601 tcttcaaaaa atttgggcaa tccgttcagc gatttctcaa atggatgatg ttgaagcgtt
     9661 gaaattttta tattctaaaa tgcttaaaac caaagacaat gtagaacttt tatctataat
     9721 gaacgagtag aaaatgcttc aagctttagc gattaaatac agaccaaaaa cctttgatga
     9781 actcatagga caaaagacag ttagcgtaag tttaaaatac gccctaaatc ataatcgctt
     9841 agctcatgct tatctttttt caggacttag aggaagtgga aaaacttcga gtgctagaat
     9901 tttttctcgt gctttagttt gcgaacaagg accaagtgat actccatgtg gcacttgcaa
     9961 acactgtctt gcagcacttg aaggcaaaca tatagacatt atagaaatgg atgctgcaag
    10021 caaccgtggg cttgaagata tacaagcctt aatcgaacaa accaaataca ccccttctat
    10081 ggcaagattt aaaattttca tcattgatga agtacatatg cttaccccac aagctgcaaa
    10141 tgcgctttta aaaaccttag aagaaccccc aagttatgtt aaatttatac ttgcaaccac
    10201 agatccttta aaacttccag ctactgtgct ttcaagaaca caacattttc gctttaaaca
    10261 aattccacag agtgaaattt taaatcatct taaagaaatt ttacttaaag aaaatgttaa
    10321 atttgaagaa gaagctttaa aatttatagc aagaagcggc aatggatctt taagagatac
    10381 tttaaccttg cttgaccaag ctattatttt ttgtcaaaat gaaatcagca ttagtaaaat
    10441 tacagatatg ctaggatttt tagatcctca aaaaatcaaa gccttttacc aggctatctt
    10501 aacaaaagac aaggaaaaag tttttgtgta tttagaggaa ttacaagact atgaagcctc
    10561 aagcgtgatt gatgaaatgc ttttttattt aaaagaaagt ttttttgcaa aaagcacaga
    10621 attttctact ttaatttatg aaagattttt ccgtatttta tcaaaagcta agaatatgct
    10681 ttgcgatgat gatggcttta cgctttgtgt tatggctttt atgatgatgg aagcaagtca
    10741 tttaaaagaa attgacgcac aaatccaaga aatcaaacaa gaaaatacaa caaatattat
    10801 acctaggatc acaccttctc ctatcatacc tcatcttgag aaaaaaacag aaaaaaatgc
    10861 ttatgaaatc ttgcttgata gtatttatga tagggatttt gatcttgcag aatgctttaa
    10921 acaaagtaca aattttatta gttttgaaaa caatacttta aatataaact caaacgcaca
    10981 aggacaaaat cgcgatacac tcaataaagg ttttaaactc atacaagaac tttttaaagc
    11041 taaatttgga gaaaatgcta aaattaatgt gcaaaaagca ctaacaattg atgaaaataa
    11101 gcttcaatcc ttaactcaag aattaccaaa caatgaaaat aaaaacatag atattcaaag
    11161 ttctattaat atgcttaaag aaggggccaa aaaatttgac ccacaagaag atcttaaaga
    11221 ggctcttaaa gattgttttg gagagcctag tatagaaaat taatcatcat ttttaagaga
    11281 gatgaaaatc aaagctaaaa acatataagt taccaatctt atagtatcag gtaaaccttt
    11341 ccaaacctta ctcatccaca ttccaaacca ttctgcaaca actacttgga aggcaaaaaa
    11401 ccataaaata cacaagttaa agaaataatc ccaaaaaatc ttagcattat gaaagctttg
    11461 agcatctaaa tttctagctt taaacatatc ataagcacct tttttagagc tgttaaggca
    11521 ataaaagttt caaaaagaat aattgctata tagcctatat gataaatcac gggagaagta
    11581 atagccatta taaactacag cattacccaa ataatcaggc tttgtatcca tactcatcac
    11641 catgcgaaac aaattggaaa ttagaattgt aatctgtcac atttccaaaa accactatac
    11701 ctgctaacga tgcaacggta agcaaaataa taatttttga aaatctaatc attttgctta
    11761 tgcaaaaaca tttttgttgc attt
//
LOCUS       DAPIYB010000054        11686 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.055, whole genome shotgun sequence.
ACCESSION   DAPIYB010000054 DAPIYB010000000
VERSION     DAPIYB010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11686)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11686)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11686
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.055"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(15..89)
                     /locus_tag="RJ318_001188"
     tRNA            complement(15..89)
                     /locus_tag="RJ318_001188"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(55..57),aa:Asn,seq:gtt)
     gene            complement(182..1429)
                     /locus_tag="RJ318_001189"
     CDS             complement(182..1429)
                     /locus_tag="RJ318_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDV7431055.1"
                     /translation="MNKSSIFYTITFIFIFAGVSVILGFLWLIEYDQQNYTRELNTKY
                     SLIANARLLNFAGVISEKEFEEQTKNYNKMDEITEAKQIRKILFRGDVLARVEVNNGL
                     IEIISYNRQVYLNIIYDGKVYLYKDQDYQTYRYFIIKAIAVAVICILVLLYIYIFKKL
                     KPLKRLKKQIDKFAQGKLGDIEDVSTGVDEISQVSEAFYQAIVQIRKLNQSRQFFLRN
                     IMHELKTPITKGLLTLEMIEDNKYKERLNGVFTRLEILINEFAAIEQITSGAAFINRK
                     KYNILDVLDEAKEIAMRDDSNIRIFMEESFFVNVDFKLFTTAIKNMIDNGIKHSEDGF
                     VQIDIIDDYICFKNRGPELNNTLEYYTQAFTQGSKQKSSFGLGLYIVNTILETHGMKL
                     DYLYEDGVNLFYFRNLKSVIVKE"
     gene            complement(1426..2100)
                     /locus_tag="RJ318_001190"
     CDS             complement(1426..2100)
                     /locus_tag="RJ318_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDV7431056.1"
                     /translation="MTNILMIEDDLELAEITAEYLEKFDMKVDIAHEPYIGLSKLALK
                     EYQLIILDLSLPGLDGLEVCEEIRKKYDTPIIVSSARHDITDKVNALELGADDYLPKP
                     YNPKELQARIKSHLRRISNTKSAIAKSVKDLVYDQYKHIITMKGQELTLTNAEFDILS
                     YLIKKEGGVVSREELVYNCSSISEDSSNKSIDVIISRIRQKMGDDPKTPKYIHSIRGI
                     GYKLTQ"
     gene            complement(2176..3594)
                     /gene="htrA"
                     /locus_tag="RJ318_001191"
     CDS             complement(2176..3594)
                     /gene="htrA"
                     /locus_tag="RJ318_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease HtrA"
                     /protein_id="HDV7431057.1"
                     /translation="MKKIFLSLSLASALFAASINFNESTATANRVNPAAGNAVLSYHD
                     SIKDAKKSVVNISTSKTITRANRPSPLDDFFNDPYFKQFFDFDFSQRKGKNDKEVVSS
                     LGSGVIISKDGYIVTNNHVVDDADTITVNLPGSDIEYKAKLIGKDPKTDLAVIKIEAN
                     NLSAITFTNSDDLMEGDVVFALGNPFGVGFSVTSGIISALNKDNIGLNQYENFIQTDA
                     SINPGNSGGALVDSRGYLVGINSAILSRGGGNNGIGFAIPSNMVKDIAKKLIEKGKID
                     RGFLGVTILALQGDTKKAYKNQEGALITDVQKGSSADEAGLKRGDLVTKVNDKVIKSP
                     IDLKNYIGTLEIGQKISLSYERDGENKQASFILKGEKENPKGVQSDLIDGLSLRNLDP
                     RLKDRLQIPKDVNGVLVDSVKEKSKGKNSGFQEGDIIIGVGQSEIKNLKDLEQALKQV
                     NKKEFTKVWVYRNGFATLLVLK"
     gene            3794..4687
                     /locus_tag="RJ318_001192"
     CDS             3794..4687
                     /locus_tag="RJ318_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family protein"
                     /protein_id="HDV7431058.1"
                     /translation="MNSLYETLGVSKNASADEIKKAYRRLARKYHPDINKEKGAEEKF
                     KEINAAYEILSDEKKRAQYDQYGDSMFGGQSFHDFSRNTGGVNLDDILKDLFGGGFGG
                     RSRGGFNGFSSKGFSSGFGGFGGFEEEILDSNLELHIPFEKAVKGGEHSFNFQGETIK
                     FKIPHGIKEGEKLRIRSKGKQSRNGARGDLIIIVKIEESPIYTREDDDLYQKVDISLK
                     TALFGGKINIKTLKEGKEEAIINITPNSKNNQKIRLKGYGVQNRKSDIYGDMYLILNV
                     VLPNLDTLDEKFIELLKEKLP"
     gene            4703..5077
                     /gene="hspR"
                     /locus_tag="RJ318_001193"
     CDS             4703..5077
                     /gene="hspR"
                     /locus_tag="RJ318_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock transcriptional regulator HspR"
                     /protein_id="HDV7431059.1"
                     /translation="MEQHYDEPVYLISVVAKVLSIHPQTLRQYEREGLIEPSRTDGKI
                     RLYSQRDIDRIKLILRLTRDMGINLAGVDVILKLKNQLHEFENLIDELRLELSKQQDK
                     EAASKAVVKHKNSFDLIFYEKK"
     gene            5083..6708
                     /locus_tag="RJ318_001194"
     CDS             5083..6708
                     /locus_tag="RJ318_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDV7431060.1"
                     /translation="MDNFLEIFLITVAIAIVLNVIFKKFEIPTIIGYIAAGEIISEIY
                     HLSGKGEITHIAEFGIVFLMFTIGLEFSFKHLMAMKQEVFLNGSLQMLTCGFVFMLLA
                     IGILGLGDKSATIVGFALALSSTAVVLKILNDNGDINEQYGRKALGILLFQDIAVIPL
                     LLLVDIFSSNNQNIEKLLFTSLISALILITLLFFIGKYLVDRIFRLIIHTSSQEIFIS
                     TVLFMVIGASFLANYFGFSYSLGAFIAGALIAETKYKHKIEADLIPFRDLLLGLFFIT
                     VGMQIQLDVVAQNWFLIIVLTLLVMALKFGIVFGFLFLYTKKRVALKTAFAIAQIGEF
                     ALAIFSLLQAKNMLDIKTSQILIVVSILTMIITPFILNNIRKITNVVEDIALNTNAVQ
                     NIDSNIKLKNHLVVFGYGRLGQEVVQKIKNTGVPYLVLESDLNLVELGVSRGENVVFA
                     NAAQEETLKIANIEECAVAIITVTNEAKLEILCQVLANYPKPIDTIIHVNGTLKKMLF
                     SSIDENIRIIRSEKVIARNLVQEALECRIHKNT"
     gene            6718..7050
                     /locus_tag="RJ318_001195"
     CDS             6718..7050
                     /locus_tag="RJ318_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431061.1"
                     /translation="MTKNEEKALRVKYLRNLEKFFNGAISALKKEDFDKTKFEERMLK
                     NAKFFEKNPAVNLNSTYAKNLEFFVNACLDFSKEKSELLNLANALDKQKKQGEKKEKH
                     KNYLKDYE"
     gene            7047..7667
                     /locus_tag="RJ318_001196"
     CDS             7047..7667
                     /locus_tag="RJ318_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDV7431062.1"
                     /translation="MINVFFDMDGTLIDSANAISCAVNEIRQDLNLAPLSREIIMQTI
                     NTPNIDWAKELYNIENFHHSSFKEGYEKYFVKHYEQSVVLFEGVKELLEFLKSKNCFL
                     AIATNAPQSSLSNILKKHDIIPYFDKILGVSLGIEPKPHPMMLELLKSEAPYKTSVFI
                     GDSQKDKECAKNANLPYFHAKWYQKNLKENEFSNASELKGFLQKYL"
     gene            7723..9717
                     /locus_tag="RJ318_001197"
     CDS             7723..9717
                     /locus_tag="RJ318_001197"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDV7431063.1"
                     /translation="MSELLIEIGTEELPAIPLLKELANIEKKWNNVLEEYRLVSDFKF
                     YYTPRRLVFFHENFADKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKARISENELS
                     FKEIKGKEVLYHQKAIKGLQSQEILGEMVEKFLKSLSFGKSMRWGANSFEFIRAIRSI
                     ACILNDELVNFQSYGVKSTKKTFIHRSVSYDLQDFNNAKEYFELLEKNYIILDPIKRK
                     EKILEQFKLIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSM
                     RENQRYFAVFNDKGLSNHFIVVSNAVCKDYSKIIHGNERVLRARLSDAMFFYQNDLQN
                     GLKPEKLAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENISTALKYAKADLAT
                     QMVYEFTDLQGIMGSYYAQKMGLDYQICLAIKEQYLPNSEQAPLPSTEFSSIVALANK
                     LDTLIGLFSIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLSNHYKSFD
                     MQILKDFIFERLYTFYTVNASFVKAVLSSQNTDLIHINQSVNALIKLSKKDNFNENFA
                     TFKRLANIATKNPHKVDESLFVQEAESKLYKAFQEKTKANSLQEKLENLFALKPFIDE
                     FFNQVMINAEDEKLKNNRQALVYEIYAEFLKIADLKELSL"
     gene            9714..10535
                     /locus_tag="RJ318_001198"
     CDS             9714..10535
                     /locus_tag="RJ318_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDV7431064.1"
                     /translation="MKALWILLSLTLWLFGAQNLELIKGQALFLELDKKDFLSLKNND
                     KNIPTFAHPKNQEKILAIFSLPYKNPPQNTKLIAFYKDKKEEIFIKTLEGNYKSEKLQ
                     IENKKIFPPKTIQERITKELKEANAIYSSYTPKALFNGAFNIPLNSFITSDFGKARTF
                     NEKVASYHSGTDFRATTGTPIYAANSGVVKIAKDRYFAGNSVVIDHGFGIYSQYYHLS
                     KIDVKIGQKIKKGELIGLSGATGRVSGPHLHFGILAGGKQVDPLDFVSKFNAIFQ"
     gene            10532..11482
                     /locus_tag="RJ318_001199"
     CDS             10532..11482
                     /locus_tag="RJ318_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDV7431065.1"
                     /translation="MKFSDFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFGTLLAK
                     HFLNLIDEKILKPPLELVEIGANEGYLSRDFLAALLELRPEIFSQISFFIIEPHEKLR
                     TLQKKTLEGVEFTHKNSLKECHFKNAFFFCNELFDSFTCELIDHDKMAFVENFKLIFK
                     NMDENLITKCKALNLTKGELSLELENFFKDLNQTCERFIFAGFDYGTLNPQSFSLRIY
                     QKHEVFSPFEVSLKDFFGKSDLTYNVNFTHLQKLIKEYDFKPLAFKKQSLAFMDFGFE
                     DLLEYTKNKNIKTYESFLSQAKILFFNFDEKFHFFEFQKN"
     gene            complement(11479..>11686)
                     /locus_tag="RJ318_001200"
     CDS             complement(11479..>11686)
                     /locus_tag="RJ318_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HDV7431066.1"
                     /translation="HKDFLNYAIKLFHMEEKKAIKEVGTMRKNYLSAGCLLFYALFDK
                     HKLLVIDEGLREGVCLASMKNIKF"
BASE COUNT         4263 a         1801 c         1685 g         3937 t
ORIGIN      
        1 tggagttaaa aaagtggctc cggatgtagg attcgaacct acgaccaatc ggttaacagc
       61 cgactactct accgctgagc taatccggaa tatttaaaag taaaatatga ttatagtgaa
      121 attaaaaaac tttgtcaagg gttttttcac aaaaatgcat tttttatgta aaaaaattaa
      181 tttactcctt aacaataaca ctttttaaat ttctaaaata aaacaaattt accccatctt
      241 catataaata atcaagcttc attccatgtg tttctaaaat agtatttaca atataaagcc
      301 ctaatccaaa acttgatttt tgttttgatc cttgagtaaa agcttgagta tagtattcta
      361 aagtattgtt aagctcagga ccacgatttt taaaacaaat ataatcatct ataatatcaa
      421 tttgcacaaa cccatcttca gaatgtttaa taccattatc tatcatattt ttaatcgccg
      481 tagtaaaaag tttaaaatcc acatttacaa aaaaactttc ttccataaaa atacgtatat
      541 tgctatcatc tcgcattgca atttctttgg cttcatctaa aacatctaaa atattgtatt
      601 tttttctatt tataaaagca gcccctgaag taatttgctc aatagcagca aattcattaa
      661 ttaaaatttc aagtctagta aaaaccccat ttaagcgctc tttatattta ttatcttcta
      721 tcatttctaa agttaagagc cctttagtaa taggagtttt gagttcatgc ataatatttc
      781 ttaaaaaaaa ctgacgagat tggtttaact ttcgaatttg aacaatagct tgataaaaag
      841 cttcacttac ttgtgaaatt tcatccaccc cagtgcttac atcttctata tcaccaagct
      901 ttccttgggc aaatttatca atttgttttt taagtctttt aagtggtttt aattttttaa
      961 atatataaat ataaagcaat acaagaatac aaatcacagc tacagctata gctttgataa
     1021 taaaatacct ataggtttga taatcttgat ccttataaag ataaaccttt ccatcataaa
     1081 taatatttaa atacacctgt ctattataag aaataatctc gattaagcca ttgttaacct
     1141 caaccctagc taaaacatca cctctaaaaa gaattttacg gatctgcttt gcttctgtta
     1201 tctcatccat tttattataa ttttttgtct gctcttcaaa ttctttttca ctgataactc
     1261 ctgcaaaatt taagagcctt gcattagcta tcaaagaata ttttgtgttt aattctctag
     1321 tataattttg ctgatcatat tctataagcc acaaaaagcc aagtataaca ctaaccccag
     1381 caaaaataaa aataaaagtt atagtataaa aaatcgaaga tttattcatt gagtaagctt
     1441 ataacctatt ccacgtatag agtgaatata ttttggagtt tttggatcat ctcccatctt
     1501 ttgacgaatt ctactgataa taacatctat acttttatta ctagaatcct cactaataga
     1561 agaacaatta taaacaagct cttcacgact taccactcca ccctcttttt taatcaaata
     1621 gcttaaaata tcaaattcag cattagttaa agtaagctct tgtcctttca tggtaataat
     1681 atgcttatat tgatcataaa caagatcttt tacacttttt gctatggcgc tttttgtatt
     1741 tgaaatacgt cttaaatgac ttttaatacg tgcttgtaat tcttttggat tataaggttt
     1801 tggtaggtaa tcatctgctc caagctctaa agcattaacc ttatctgtaa tatcatgtct
     1861 tgcgcttgaa acaataatag gcgtatcata ctttttacga atctcttcac acacttcaag
     1921 cccatcaagc cctggcaaag aaaggtctaa aatgataagc tgatattctt ttaatgcaag
     1981 cttagaaaga cctatataag gttcatgagc tatatcaact ttcatatcaa atttttccaa
     2041 atattcagct gtaatttctg ctaattctaa atcatcttct atcataagaa tatttgtcat
     2101 agttttcctt tattttaaac ttaattttaa ttttaaacta aaatttataa cgaaaggaaa
     2161 atccttccgt tatttttatt taagcacaag caaagtcgca aaaccattgc gatataccca
     2221 aactttggta aattcttttt tattaacttg ttttaaagct tgttctaaat cttttaaatt
     2281 tttaatttca ctttgtccaa cacctatgat aatatcaccc tcttggaaac cagaattttt
     2341 tcctttgctc ttttctttaa cactatcaac caaaacacca ttaacatctt ttggaatttg
     2401 caaacgatcc ttaagtcttg gatctaaatt tctcaaactc aaaccatcaa tcaaatcgct
     2461 ttgtacgcct ttaggatttt ctttttcgcc tttaagaata aaacttgctt gcttattttc
     2521 tccatctctt tcgtaactta atgaaatttt ttgaccaatc tctaaagttc ctatataatt
     2581 tttaagatca ataggacttt ttataacctt atcattaact ttagtaacta aatctccacg
     2641 cttaagccct gcttcatcag cacttgaacc tttttgaaca tcagtgatta aagctccttc
     2701 ttgatttttg taagcttttt tagtatcacc ttgcaaagct aaaatagtca cacctaaaaa
     2761 tcctctatca atcttgcctt tttcaataag ttttttagct atatctttaa ccatatttga
     2821 aggtatggca aaacctatgc cgttatttcc accaccacga gaaagaatag ctgaattaat
     2881 acctactaaa tatccgcgac tatccaccaa agctccacct gaatttcctg gattgataga
     2941 agcatctgtt tgtataaaat tttcatattg atttaaacct atattgtctt tatttaaagc
     3001 agatattatc ccacttgtaa cactaaaacc aactccaaaa ggatttccaa gtgcaaaaac
     3061 aacatctcct tccattaaat catcagaatt tgtaaaagta atagctgaaa gattattagc
     3121 ctctattttt ataacagcca aatctgtttt tggatcttta cctataagtt ttgctttata
     3181 ttctatgtcg cttcctggta aattcactgt aatcgtatca gcatcatcta caacgtgatt
     3241 atttgttact atataaccat cttttgaaat aatcacccct gatcccaaag aactcaccac
     3301 ttctttatca ttttttcctt ttctttgaga aaaatcaaaa tcaaaaaatt gtttaaaata
     3361 aggatcatta aaaaaatcat ccaaagggct tggacgattt gctcttgtaa tagtttttga
     3421 ggtggaaata ttaaccactg atttttttgc atctttaata gaatcatgat aagaaagcac
     3481 tgcatttcca gcagcaggat tcacacgatt agccgttgca gtcgattcgt taaaattaat
     3541 acttgcagca aataaagcac ttgctaaact taatgataaa aaaatctttt tcatttcatt
     3601 tccttttgtt cttaaagata aattatctcg taaaatattt tactgtcttc atagtataaa
     3661 accgaaaatt tacaaaattg taaataaaac cttgagtgat aaaaatttat aaaacttgat
     3721 tgacttaggc taaagtttat gttataattt aatcctctat ataatcaagt aaaaattttt
     3781 aaggaaatat aacatgaata gtttatacga aactcttgga gttagcaaaa acgctagtgc
     3841 agatgaaata aaaaaagctt accgtcgcct agctagaaaa tatcatcctg atatcaacaa
     3901 agaaaaaggt gctgaagaaa aatttaaaga aattaatgct gcttatgaaa ttttaagtga
     3961 cgaaaaaaaa cgagctcagt atgaccaata cggcgattct atgtttggtg gacaaagttt
     4021 tcatgatttt tcaagaaata ctggtggggt aaatttggac gatattttaa aagatctctt
     4081 tggaggaggc tttggtggac gctcaagagg gggttttaac ggcttttctt caaaaggctt
     4141 tagcagtggt tttggaggat ttggaggttt tgaagaagaa attttagaca gcaatctaga
     4201 gcttcacatt cctttcgaaa aagctgttaa aggcggggaa catagtttta attttcaagg
     4261 cgaaaccatt aaatttaaaa ttccacatgg tataaaagaa ggcgagaaac taagaattcg
     4321 ctctaaagga aaacaaagca gaaatggagc tagaggagat ttaatcatta ttgtaaaaat
     4381 agaagaaagt cctatttaca caagagaaga tgatgattta tatcaaaagg ttgatatttc
     4441 tttaaaaact gcactttttg gtggaaaaat aaatataaaa acactcaaag aaggcaagga
     4501 agaagcaata attaacataa cgcctaattc aaaaaataac caaaaaattc gtttaaaagg
     4561 ctatggtgtg caaaatagaa aaagtgatat ttatggggat atgtatttga ttttaaatgt
     4621 tgttttgcca aatttagata cccttgatga aaaatttata gaactcttaa aagaaaaatt
     4681 accttaaaga aaggaataaa atatggaaca gcattatgat gaacctgtat atttaatcag
     4741 tgttgtggct aaagttttaa gcatacatcc acaaacctta aggcaatacg aaagagaagg
     4801 attgatagag ccaagtagaa ccgatggcaa aataagactt tattctcaaa gagatattga
     4861 ccgtattaaa cttatattgc gtttaacaag agacatggga atcaatcttg ctggagtaga
     4921 tgttatctta aaattgaaaa accaacttca cgaatttgaa aatttaattg atgaactacg
     4981 cttagaatta agcaaacaac aagataaaga agcggctagt aaagccgttg ttaagcataa
     5041 aaatagcttt gatttgattt tttatgagaa aaaataaaaa taatggataa ttttttagaa
     5101 atttttttaa tcaccgttgc tatagctata gttttaaatg tcatatttaa aaaatttgaa
     5161 attccaacta tcattggata tatagctgct ggagaaatca tttctgaaat ttatcattta
     5221 agtggcaaag gcgaaatcac tcatatagcc gaatttggta tagtgttttt aatgtttacc
     5281 atagggcttg aattttcttt taagcattta atggcaatga aacaagaagt ttttttaaac
     5341 ggctctttgc agatgcttac ttgtggcttt gtttttatgc tacttgctat aggaatttta
     5401 ggacttggag ataaaagcgc taccatagta ggctttgcac tagcgctttc ttcaaccgca
     5461 gtggtgctta aaattttaaa tgataatggc gatataaatg agcaatatgg cagaaaagca
     5521 ttgggaattt tgctttttca agatatagcc gttattcctt tgcttttgct tgtagatatt
     5581 ttttcatcca acaatcaaaa catagaaaaa ctccttttta ccagtttaat ttcagcactt
     5641 attttaatca ctttattatt tttcataggt aaatatctag tggatagaat ttttagactc
     5701 attatccaca cttcttctca ggaaattttt attagtactg ttttatttat ggttattgga
     5761 gcaagttttt tagcaaatta ttttggattt tcttattctt tgggtgcttt tatagcaggt
     5821 gctttgatag cagaaacaaa atataaacac aaaatagaag cggacttgat cccatttaga
     5881 gatttgcttt tagggctttt tttcataact gtaggcatgc aaattcaact tgatgtagtg
     5941 gcgcaaaatt ggtttttaat catagtttta acccttcttg taatggcttt aaaatttggc
     6001 atagtttttg gctttttatt tctttacacc aaaaaaagag tagcgcttaa aacagctttt
     6061 gccatagcgc aaattggcga attcgcccta gcaatttttt ctcttttaca agcaaaaaat
     6121 atgcttgata tcaaaacttc acaaatttta attgttgttt ctattttaac catgattatc
     6181 acgcctttta ttttaaacaa tataagaaaa attaccaatg ttgtagaaga tatagcactt
     6241 aataccaacg ctgtgcaaaa tattgacagt aatatcaagc ttaaaaatca tcttgttgtt
     6301 tttggctacg gacgcttagg acaagaagtt gtacaaaaaa tcaaaaatac aggcgtacct
     6361 tatcttgttt tagaaagtga tttaaattta gtagaacttg gagttagtcg gggtgaaaat
     6421 gtcgtttttg ccaatgctgc tcaagaagaa accttaaaaa ttgccaatat agaagaatgt
     6481 gccgtagcta ttatcacagt tacaaatgaa gctaaacttg aaattttatg tcaagtgcta
     6541 gctaattatc caaaacctat agatactatc attcatgtaa atggaacttt gaaaaagatg
     6601 cttttttcta gcatagatga aaatatacgc atcattcgct ctgaaaaagt aatcgctaga
     6661 aatttagttc aagaagcact agaatgccgc attcataaaa atacctaagg aagaattttg
     6721 acaaaaaatg aagaaaaagc cttacgcgta aaatacctaa gaaatcttga aaaatttttc
     6781 aatggcgcta tatctgcact taaaaaagaa gattttgata aaactaaatt tgaagaaaga
     6841 atgctaaaaa atgctaaatt ttttgaaaaa aatcccgcgg taaatcttaa ctcaacctat
     6901 gcaaaaaatc ttgaattttt tgtcaatgct tgtttagatt tttccaaaga aaaaagcgaa
     6961 cttttaaatc ttgccaatgc tttagataag caaaaaaaac aaggtgagaa aaaagaaaaa
     7021 cacaaaaatt atttaaagga ttatgaatga ttaatgtatt ttttgatatg gatggaactt
     7081 taatcgatag cgcaaatgcc atttcttgtg cagtcaatga aataagacag gatttaaacc
     7141 tagccccact ttcaagagaa atcattatgc aaaccatcaa tactcctaat attgactggg
     7201 caaaagaact ttataatata gaaaatttcc atcattctag ttttaaagaa ggctacgaaa
     7261 aatattttgt caaacactat gaacaaagcg tggtgctttt tgaaggggtg aaagaactgt
     7321 tagaattttt aaaaagcaaa aattgttttt tagctattgc tactaacgcc ccgcaaagct
     7381 cactttcaaa catacttaaa aaacacgata tcattcctta ttttgataaa attttaggcg
     7441 taagtttagg catagaaccc aaacctcatc ctatgatgct agagctttta aaaagcgagg
     7501 ctccatataa aacaagcgtt tttataggag atagtcaaaa agataaagaa tgtgctaaaa
     7561 atgctaattt gccttatttt catgccaaat ggtatcaaaa aaatttaaaa gaaaatgaat
     7621 ttagcaacgc tagtgaactt aaaggctttt tgcaaaagta tttataagtt ttttaatgaa
     7681 attttagtta aaattagaaa taaattttaa aaagagtaaa ttatgagtga attattaata
     7741 gaaattggta cagaagaatt acctgctatt cctttgctaa aagaattagc taatatagaa
     7801 aaaaaatgga acaatgtttt agaagaatac cgcttggtaa gtgattttaa attttattat
     7861 actccgcgtc gtttagtttt ttttcatgaa aattttgcag acaaacaaga agatagcttt
     7921 gctgaattta taggagcacc taaaaatgtt gcttataaag atggagtttt aactcctgcg
     7981 ggacaaagct tcctgcaaaa agcaaggatc agtgaaaatg aactctcttt taaagaaatc
     8041 aaaggcaagg aagttttgta ccatcaaaaa gctattaaag gtttgcaaag tcaagaaatt
     8101 ttaggagaaa tggtagaaaa atttctaaaa agtcttagtt ttggcaaaag tatgcgctgg
     8161 ggtgcaaatt cttttgaatt catccgtgcg atccgttcta tagcttgcat tttaaatgat
     8221 gaacttgtta attttcaaag ctatggagta aaaagtacta aaaaaacttt cattcacaga
     8281 agcgtaagtt atgatttgca agattttaac aatgcaaaag aatattttga actactagaa
     8341 aaaaactata tcatccttga tccaatcaaa agaaaggaaa aaatacttga gcaatttaaa
     8401 ctcatagaaa gtcaaaaaaa tatacaaatt ggagaagatg aagagctttt agctgaagta
     8461 gttgctatca cagaatatcc taatgcactt ttaggaagtt ttgaagaaga atttttagaa
     8521 attcctagcg aagtaatcat cacttcaatg agagaaaatc aacgttattt tgcagttttt
     8581 aacgataaag gcttaagtaa tcattttata gtagtaagta atgcagtatg taaggattat
     8641 tcaaaaatca tacatggaaa tgaaagagtt ttgcgtgcaa gacttagcga tgcaatgttt
     8701 ttttatcaaa atgatttaca aaatggctta aaacctgaaa aacttgccaa aatgacctat
     8761 cttgaaggtt taggcacaat gcaagataaa agtttaagag agattaaaat tgctgaaatt
     8821 ttatgtcaaa tgctccataa tgataaaatc gaaaatatca gcacagcact aaaatacgcc
     8881 aaagcagact tagccacaca aatggtttat gaatttactg atttgcaagg cattatggga
     8941 agttattatg cgcaaaaaat gggcttagat tatcaaattt gcttagctat caaagaacaa
     9001 tatcttccta attccgaaca agctccactt ccaagtacag aattttcaag catagtagcc
     9061 cttgcaaaca agcttgatac ccttatagga ctttttagca taggaaaaat tccaagcgga
     9121 acaaaggatc cttatgcctt aagaagagct gccaatggga tcattaaaat tgctttaaat
     9181 ttaaataaag aatttgatat ccaaatttta ttagaaaaac tttcaaatca ttataaaagc
     9241 tttgatatgc aaattttaaa agattttatt tttgaaagac tttatacttt ttatacagtc
     9301 aatgcttctt ttgtaaaagc ggttttaagc tcacaaaata cagatcttat ccatatcaat
     9361 caaagcgtaa atgctcttat aaaacttagc aaaaaagata attttaatga aaattttgca
     9421 acctttaaaa gactagccaa tatcgccact aaaaatcctc ataaagttga tgaaagtctt
     9481 tttgttcaag aagcagaaag taaactttac aaagcttttc aagaaaaaac taaagccaac
     9541 tctttacaag aaaaacttga aaatcttttt gcacttaagc cttttattga tgagtttttt
     9601 aatcaagtga tgattaatgc tgaagatgaa aaacttaaaa ataatcgcca agctttggtt
     9661 tatgaaattt atgcggagtt tttaaaaatc gccgatctta aagagttaag cctatgaaag
     9721 ccctatggat tcttttaagc cttactcttt ggctttttgg agctcaaaat ttagaactca
     9781 tcaaaggtca agctttattt ttggaactag ataagaaaga ttttttatct ttaaaaaata
     9841 atgataaaaa tattcccacc tttgcacatc ctaaaaatca agaaaaaatt ctagctattt
     9901 tttccttacc ttacaaaaat cccccgcaaa acaccaaact tatcgcattt tataaagata
     9961 aaaaagaaga aattttcata aaaactttag aaggtaatta taaaagtgaa aaattgcaaa
    10021 ttgaaaacaa aaagattttt ccgccaaaaa ccatacaaga acgcatcact aaagaattaa
    10081 aagaagccaa tgcgatttat agttcttata ctccaaaagc tttatttaac ggtgctttta
    10141 atataccttt aaattctttt atcacaagtg attttggcaa agcaagaact tttaatgaaa
    10201 aagtagcaag ttatcacagc ggaacggact ttagagctac cacaggaaca cctatttatg
    10261 cagccaattc aggtgtagta aaaattgcaa aagatcgtta tttcgcagga aattcagtag
    10321 tcattgatca tggttttgga atttattcac aatattatca tctttctaaa atcgatgtta
    10381 aaataggaca aaagataaaa aaaggtgaac ttataggact tagtggggct acaggtaggg
    10441 taagtgggcc gcatttgcat tttggaattt tagctggagg caaacaagtt gatcctttgg
    10501 attttgtatc caaatttaat gctatttttc aatgaaattt agtgactttt tccatgcttg
    10561 gctccatgaa agctattata aaaatgctgt aagtatagga aaaaacggag atttttttac
    10621 tgctgtgagc gtaggaaatc tttttggcac acttttagcc aagcattttt taaatttaat
    10681 agatgaaaaa attctcaaac ctccactaga acttgtagaa ataggcgcta atgaaggcta
    10741 tttaagtcgt gattttttag ccgctttgct tgaattaaga cctgaaattt tttctcaaat
    10801 ttcttttttc atcatagaac cacatgaaaa attaagaact ttacaaaaaa agactttaga
    10861 aggagtggaa tttactcaca aaaatagtct taaagaatgc cattttaaga acgctttttt
    10921 cttttgcaat gaactttttg atagttttac ctgcgaactt atagatcatg ataaaatggc
    10981 atttgtagaa aattttaaac ttatttttaa aaatatggat gaaaatttga tcacaaaatg
    11041 caaagcttta aatcttacaa aaggcgaact cagtttagag cttgaaaatt tttttaaaga
    11101 tttaaaccaa acttgtgaga gatttatatt tgcgggattt gactatggaa ctttaaatcc
    11161 acaaagtttt agcttaagaa tctatcaaaa gcacgaagtt tttagccctt ttgaagtatc
    11221 tttaaaagat tttttcggca aaagcgatct aacttataat gtcaatttta ctcatcttca
    11281 aaaactcatc aaagaatatg attttaaacc tttagctttt aaaaaacaaa gtcttgcttt
    11341 catggatttt ggttttgaag atttattaga atacacaaaa aataaaaaca ttaaaactta
    11401 cgaaagtttt ttatctcaag ctaaaatttt attttttaat tttgatgaaa aatttcattt
    11461 tttcgaattt caaaaaaact aaaattttat atttttcata ctcgctaaac aaaccccctc
    11521 tcttaaaccc tcatcaatga ctagaagttt atgtttatca aacaaagcat aaaacagcaa
    11581 acaacctgca ctcaaataat tttttctcat cgtgcctact tcttttatag cttttttttc
    11641 ttccatatga aaaagtttaa tagcataatt taaaaaatcc ttatgg
//
LOCUS       DAPIYB010000055        11675 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.056, whole genome shotgun sequence.
ACCESSION   DAPIYB010000055 DAPIYB010000000
VERSION     DAPIYB010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11675
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.056"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            42..1477
                     /locus_tag="RJ318_001201"
                     /pseudo
     CDS             42..1477
                     /locus_tag="RJ318_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516966.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
     gene            1474..3264
                     /locus_tag="RJ318_001202"
     CDS             1474..3264
                     /locus_tag="RJ318_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HDV7431067.1"
                     /translation="MSIYKQRVLELRRLMKENNIDAYLILSADPHLSEYLPEYYKNRV
                     FISGFKGSVGTVLITQEEGFLWVDGRYWLQAQKELEGSGILLQKQDAKNTFTKWLEKN
                     LSEDQILGIDFALLPLSLQKDLKINCKANLKHIDLISPLWKDRPTLPQEKIYEHELEY
                     CSYSRKEKLALVRQKMKNLNATSHLISSLDDIAWLTNLRGNDVNYNPVFLSHLLILED
                     KALLFVDQKKVNSELEKKLNLDGFWLKNYDEIIMELEELANTNLLIEPSKMTALLINS
                     LDKSVKIIQEINPSTHLKAAKNTKEIAHIQDAMIEDGVALCKFFAWLEEAIKNKELIS
                     ELDIDVKASEFRAQSKYYISDSFATIAGFNENAAYPHYKATKESFAYLKKDGLLLIDS
                     GGQYKNGTTDITRVVPIGKANAEQIHDYTLVLKAHIAISSAIFPKDITMPLLDAITRA
                     PLWKEQIDYIHGTGHGVGYFLNVHEGPQVLSYLSPVLEKTKAKEGMLTSIEPGIYKVG
                     KWGIRLENLVIHTKVENPKNKDFGEFLYFKPVTLCPFEISCIDTKMLDEKEKEWLNNY
                     HKEVFEKLSPKLGDYPKALVWLEKRTKAIF"
     gene            complement(3385..5190)
                     /gene="mrdA"
                     /locus_tag="RJ318_001203"
     CDS             complement(3385..5190)
                     /gene="mrdA"
                     /locus_tag="RJ318_001203"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDV7431068.1"
                     /translation="MRMRLVVGFILLFFIFLLSRVYYLSIKSNVYYEELAKQNAIKTE
                     FLPPVRGQITDRNGTLLAINDLGFSISIKPYLSIKKSNKGILDKELSELTNLFPDLNA
                     SKLAEIYKRNDSYYNQDFIKVVDFIPYDEIISHYSELNLNKTIKIDPVVKRKYPFGKL
                     ASHIIGYVGKANLQDVQENEIAKLSNYTGKSGIERYYNDILQGEKGTRVYKVNALNQE
                     VEQLSYTPAMSNDIELTIDIELQSYLTSLFEGNAGAAIIMNVNDGSILAAGSFPEYDL
                     NPFVTGISFKDWDELSNSLDHPFTNKLINGYYPPGSVVKMGVGLSFLNSKNISPSTHY
                     VCNGSIELGGRFFRCWNRSGHGPVDLKHAIKYSCDVYFYNGSLQVGIDQISETLSRIG
                     FGVKTGVDLPSEFVGTLPSKEWKMQRYRQSWFQGDTLNTAIGQGNFLATPMQIARYTA
                     QIAKSGEVIPHFLKSIENNNTTIENQMDENKKEIFTLFEKSQLPYIRDAMYAVANEQG
                     GTSYRYLHNLDVKVAAKTGTAQVVGFSQTDKNRVDEKQFEYYTRSHAWLTSYAPYSKP
                     KYVVTVLLEHGGRNITSGATVAKIYQKMIELGYFK"
     gene            complement(5191..5685)
                     /locus_tag="RJ318_001204"
     CDS             complement(5191..5685)
                     /locus_tag="RJ318_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431069.1"
                     /translation="MRRNLSAYKAKFNGAYVFLGFFFLIYQILGSTFVYTPLLYGIFF
                     CYMFCLLEERERTFSKLDFRWYFSLFFLFFTDITYNFFIFSSWLAFFIFYYLCADWIK
                     TNLKIGKFIPVVFVLCAYGIILFLDMILSYIGDEKIKILGWAYIVSVFIECCLAYVFF
                     KGKI"
     gene            complement(5682..6278)
                     /locus_tag="RJ318_001205"
     CDS             complement(5682..6278)
                     /locus_tag="RJ318_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDV7431070.1"
                     /translation="MIISAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCK
                     QKNLAKSSATPGKTQLINFFEVICRRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQNL
                     DEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSE
                     KAKLKNEFKDSILVSNLNKFGLDSLEDIIINQTLGLDK"
     gene            complement(6275..6736)
                     /locus_tag="RJ318_001206"
     CDS             complement(6275..6736)
                     /locus_tag="RJ318_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HDV7431071.1"
                     /translation="MVARQIILLLVCVSVTWATQIEVKALNFYSDENKGESILSGNVE
                     VIRGDDILNSEKLIIYTDKNRKPIRYEAMQNARFKIVLKGKTYKGSGDKFIYNVIKDT
                     YEINGHAYINELGSNQKLFGDKIIVDRKANIYRVESKDQKPARFVFDLKDK"
     gene            complement(6718..7233)
                     /locus_tag="RJ318_001207"
     CDS             complement(6718..7233)
                     /locus_tag="RJ318_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431072.1"
                     /translation="MAIKIFGILIALFTITFTILSLQDPYSLNLQTNALNFKNIEAKN
                     LKAYESNTSIIKAYYKANSWVRYADRDEFNDFITLNLDFNLSANRLEFFNKDMSKVLF
                     EGNVTYIGSNNVKIISQEVEYQPKDKILHTNTNFKALINGSIINGNTLNYDVKNKILN
                     IQGVNAWLQDK"
     gene            complement(7224..7712)
                     /locus_tag="RJ318_001208"
     CDS             complement(7224..7712)
                     /locus_tag="RJ318_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HDV7431073.1"
                     /translation="MTELIFLDVDGCLTDGKIIYTSNGEFIKEFNVKDGAAIEAWLKL
                     GKKIAIITGRNCPCVEKRAKDLKIKILYQGIKDKLACAKEILQKLNLDFSQCAAIGDY
                     FNDKALLESVGLSFKPKDGHKDLNVDIVLSKKGGKAAVAQMIEILVEKNHLEEEWNKL
                     WL"
     gene            complement(7718..8545)
                     /locus_tag="RJ318_001209"
     CDS             complement(7718..8545)
                     /locus_tag="RJ318_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HDV7431074.1"
                     /translation="MQIKTITLKLSAVSLGALFFSGCLGTSFFSSLDNAQVYYPSNDF
                     KSSPSSSGTKGTMKPYTINGKTYYPTVVAVGETADGIASWYGPGFHGKKTSNGETYNQ
                     NALTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMIAS
                     GTAPVRLEVIGFGSSNSGNNIVHSNVNYGNSGEIANNGQIYEGGNFMVQIGAFKNPAG
                     AQTIAARYKTYRTYSSTIRTSSVDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE"
     gene            complement(8505..9623)
                     /locus_tag="RJ318_001210"
     CDS             complement(8505..9623)
                     /locus_tag="RJ318_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDV7431075.1"
                     /translation="MKKILLCFLICFNFLFAQINTPEFYERQMNVLRNLDINPSFISD
                     LIFVQTQQDIKSKHAQTLIDSMQNFSKVTPMIRKILAQQEVPDEILYLAMVESGLKTH
                     SVSNAKAVGVWQFMQPTARNLGLRIDAYVDERRDPVKSTYAATNYLKELKEEFGKWYL
                     ALLAYNCGNGKLRQAIKQAGSDDLSVLLNPDKKYLSLETRNFIRKILTLAFLANDRDF
                     LLDKDASLMNYALSNEFAKVDVPSSASLKEIAKNLNMDLATFKKYNPQFKHNFTPPGK
                     GYYMYIPLNKVAFFDKNFKAEKLAKVDTTIPMTRTYTVKSGDSLYKIAKNYNISVDEI
                     REFNKIAKNHLSINQKLIIPIKENKNANKNNYTKVVSR"
     gene            complement(9623..10438)
                     /locus_tag="RJ318_001211"
     CDS             complement(9623..10438)
                     /locus_tag="RJ318_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDV7431076.1"
                     /translation="MFLNLDFQDGLRIVDTHCHLDSEAFKDDLDETLNRAFKNGIEKI
                     IIPGADIKDLPYAATIAHKYKNIFFAAGVHPYEIDNYDEKILRQYLCDEKCVAVGECG
                     LDYFRFKSDLAEEIQKEKENQKKIFIAQLELAIEFKKPVIIHSREANHDTYEILHGYS
                     KDLVGGVLHCFNASEHLLTLFEEGFYFGIGGVLTFKNAKKLVEILPKIPKDKLLLETD
                     APYLTPEPYRGKRNEPLLTQFVVNKMCEVLNLSRKELLEICFNNSEKLFFKGY"
     gene            complement(10429..11673)
                     /gene="cbrR"
                     /locus_tag="RJ318_001212"
     CDS             complement(10429..11673)
                     /gene="cbrR"
                     /locus_tag="RJ318_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile resistance response regulator CbrR"
                     /protein_id="HDV7431077.1"
                     /translation="MNKKILIIDDNKMLGKLLAKKIQMTLDYEVDIAFGFAEAKELMN
                     NDYFLAFVDLCLPDAPNGEVVDYVIEKKIPAIVLTASGDKATKEKFMDKDILDYIFKE
                     SETCIDEIISSIVKLNQYAKTKVILAMSKLPERNEIKKILTQRQFNVLAAAHGEEAMS
                     YLNDNNDVKLIIADVNMPVISGFELLTQVRERFSDDELGVILLGDHNDSFEANSFKNG
                     VNEYLFKPLSKESFNCRLDRCLSYMDDKKFLSTYNVLDPVSGVKNYNALIDGIDDYFN
                     EIATKDEEFAFAFLDIDNLQMINDEYGREVGDEVIKICANEIVNETKGRDLVGRYSAE
                     KICILLKNISQERAIKIFSRIRVNIKKAGVLVNLDEVFFTASIGVVFGKSGDKIDSLA
                     DKASKILSQAKDNGKDRVEVCS"
BASE COUNT         4112 a         2006 c         1475 g         4082 t
ORIGIN      
        1 agttaaaata ttttaaacat aaaaaagaaa ggtattggga agtgactaaa caagaaatac
       61 aaaaactcga tacaaatttc ctaggtcatc gcaagccttt attctctcta tcaatggtag
      121 aactttggga aagatttgct tttatggtat ttttgcagga gcttgtattt agcagcacgc
      181 ttcctggagg ctggattact gataattatt cagggcaaaa aaggctttat ttctaggttc
      241 ttttattata actttaggac atattagcat agccttatct attttaagca cacctatgtt
      301 tttcctaggg cttactttta tcgttattgg tactggattt tttaaaacta acgcttctgt
      361 aacagttgga atattatata aacaaaatga tacaagatgc gatactggct atacgatttt
      421 ttatatagga attaacattg gagcattcat tgctcctctt atatgtggtt ttgttcaagc
      481 aaaatggaat tatcatttag gatttggcta ggaggtttag gtatgctaat ctctttgctt
      541 attttatatt ttaaagctgc ccttgagctt gaagaatttc ataaaaattg taccttaaag
      601 caaaactggg aacaaccatt taaaaaagta aaaaatttaa ctcttatact aagtataagc
      661 ttgttaagta ttattggatt ttttctaatg tttattaatc ttgtaaatat taatcccata
      721 taatactatc aaaaaaactt ctaattgtaa ttttactatg cttggtaatt tatttcatat
      781 atctttttgt ttttaaagcc ttaaataaaa gagagaaaca acaattaata attttaattg
      841 ttttattctt tgcagccact ttttttggag tacttttaaa caaaaaccct accgcttata
      901 atctttttgc gcaagatttt acaaatagaa atatttttga ttggaaaatt ccaacaaact
      961 ggtttcaatc ttttaatcca atttttatca tcatacttgc tcctatagca agttatattt
     1021 ggatattttt agagaaaaaa atatatattt ttcttccatt ggaaaattta ctttaggaat
     1081 attatttgcc ggtattggtt ttatgatgat gacctttgct tcacaaaatc taataaacaa
     1141 caatggttta ccaatatcca tggcttggat tatcataagt atattctttt taacacttgg
     1201 ggaactatgc gtgtctccta ttggactctc tataatgact aaggtcgccc ctgatttaat
     1261 caaaaatcaa gtcatgggac tttggtttgt agcaagtgca ttaggcaatg ctttagctgg
     1321 attcataggt ggtaaagcaa gtgaagaaaa tatagcttat ttgccaaatt tattttacca
     1381 atgtatgtgg atattacttg gtgctgttat aattttactt atactcaaaa aacctatcaa
     1441 taaaatacta aaaattaata ttaaggagaa aatatgagta tttacaaaca aagagtatta
     1501 gaacttagaa gattaatgaa agaaaataat attgacgcct atctcatctt aagcgcggat
     1561 ccgcatttga gcgaatattt accagaatat tacaaaaaca gagtctttat cagtggcttt
     1621 aagggttctg ttggaacagt tcttatcaca caagaagagg gctttttgtg ggtagatgga
     1681 agatattggc ttcaagcaca aaaggaatta gaaggtagtg gcatactttt acaaaagcaa
     1741 gatgctaaaa atacttttac caaatggttg gaaaaaaatt taagcgaaga tcaaatttta
     1801 ggcatcgatt ttgcactttt acctttatct ttgcaaaaag atttaaagat taattgcaag
     1861 gcaaatttaa aacatataga tttgataagt ccactttgga aagatcgtcc cactttacca
     1921 caagaaaaaa tttatgaaca cgaactagaa tactgctctt actcaagaaa agaaaaatta
     1981 gcattagtgc gtcaaaaaat gaaaaattta aatgctacct ctcatttaat ctccagcctt
     2041 gatgatatag cttggcttac aaatttaaga gggaatgatg taaattataa tcctgtattt
     2101 ttaagtcatt tgctaatctt ggaagacaaa gccttgcttt ttgttgatca gaaaaaagta
     2161 aattcagaac ttgaaaaaaa attaaattta gatgggtttt ggcttaaaaa ttatgatgaa
     2221 atcatcatgg agcttgaaga acttgcaaat acaaatttgc ttattgaacc ttcaaaaatg
     2281 accgctttac tcataaattc tttagataaa agcgtaaaaa tcattcaaga aattaatcca
     2341 agcactcact taaaagcagc taaaaataca aaagaaatag cgcatataca agatgctatg
     2401 atagaagatg gagtggcttt atgtaaattt tttgcctggc ttgaagaagc gataaaaaat
     2461 aaagaactaa taagcgaatt agacatagat gttaaagcaa gcgaatttag agcgcaaagc
     2521 aagtactaca taagtgatag ttttgccact atagcaggct ttaacgaaaa tgcagcatat
     2581 ccacattata aagccacaaa agagagtttt gcttatctta aaaaagatgg gcttttactt
     2641 attgattctg gtggacaata taaaaacggc acaacagata ttacacgcgt tgtaccaata
     2701 ggaaaggcta atgcagaaca aattcatgac tataccttgg ttttaaaagc acatattgcc
     2761 atttccagtg caatttttcc aaaagatata actatgccct tacttgatgc aatcacacgc
     2821 gcacctttat ggaaagaaca aattgactat atacacggca caggacatgg cgtgggatat
     2881 tttttaaatg tccatgaagg tccacaagtt ttatcttatc tatcccctgt gcttgaaaaa
     2941 acaaaagcca aagaaggtat gctaacctcc atagagccag gtatttataa agtaggtaaa
     3001 tggggtataa gacttgaaaa tttagttatt cataccaaag tagaaaatcc taaaaataaa
     3061 gattttggag agtttttata ctttaaacct gttactcttt gtccttttga aatatcttgt
     3121 attgatacaa aaatgttaga tgaaaaagaa aaagaatggt taaacaatta tcacaaagaa
     3181 gtatttgaaa aactttctcc taagctaggt gattatccaa aagctctagt ttggcttgaa
     3241 aaaagaacaa aagccatctt ttaagatact tttgttaaca tagataaatt ttccttgtat
     3301 taaacttata atttgtttaa tacaagattt ttaaaccaat tgctaaaaaa gttttttttg
     3361 aaaaactcaa tttacaacta aaaattattt aaaatatcca agttcaatca ttttttgata
     3421 aattttagct acagttgccc ctgaagtaat atttctccca ccatgttcca aaagaacggt
     3481 aactacatat tttggcttag aataaggagc ataagaagta agccacgcat gagatctagt
     3541 ataatactca aattgttttt catcaaccct atttttatct gtttgtgaaa atcccacaac
     3601 ctgagcagtt cctgtttttg ctgcaacttt cacatcaaga ttatgcaaat aacgataaga
     3661 ggttcctcct tgctcattag caacagcata cattgcatct cttatataag gcaattgact
     3721 cttttcaaat aaagtaaaaa tttctttttt attttcatcc atttgatttt ctatagttgt
     3781 attattattt tctatgcttt ttaaaaaatg aggtataacc tctccacttt ttgcgatttg
     3841 agccgtatat ctagcaattt gcataggtgt tgcaagaaaa ttaccttgac ctatagctgt
     3901 atttaaagta tcaccttgaa accaagattg tctatatctt tgcatcttcc attctttgct
     3961 tggtaaagtt cctacaaatt cactaggtaa atctacccct gttttcactc caaagccaat
     4021 gcgagataaa gtttcactta tttgatcgat tccaacttgc aaactgccat tataaaaata
     4081 aacatcacaa ctatatttta tcgcatgttt taaatccaca ggtccatggc ctgatcgatt
     4141 ccaacatcta aaaaacctgc ctccaagctc aatgcttcca ttgcaaacat aatgagtcga
     4201 cgggctaata tttttagaat ttaaaaaaga aagccctact cccattttta caacagaacc
     4261 tggaggataa tatccattta taagtttatt tgtaaaagga tgatcaagac tatttgaaag
     4321 ctcatcccaa tccttaaaag aaatccctgt tacaaaagga ttaagatcat attcagggaa
     4381 actccctgca gctaaaatag atccatcatt tacattcata attatagcag ctccagcatt
     4441 cccttcaaac aatgaagtta aataagactg aagctctata tctatcgtaa gttctatatc
     4501 attagacata gcaggagtgt aagaaagctg ttctacttct tgatttaagg cattaacctt
     4561 ataaacccta gttccttttt ctccttgtaa aatatcatta taatagcgtt ctataccgct
     4621 ttttcccgta tagttagaaa gttttgctat ttcattttct tgaacatctt gcaaatttgc
     4681 cttacctaca tacccaataa tatgcgaagc caattttcca aaaggatatt ttctttttac
     4741 aacaggatct atttttattg ttttattaag atttaactct gaataatgcg aaataatctc
     4801 atcatagggt ataaaatcta ctactttaat aaaatcttga ttatagtaag aatcatttct
     4861 cttataaatt tctgctaatt tactagcatt taaatcggga aataaatttg taagttcaga
     4921 taattcttta tccaaaattc ctttatttga ctttttaata cttaaataag gtttaataga
     4981 aatactaaaa cccaaatcat taatagccaa taaagttcca tttctatctg taatttgacc
     5041 cctaacaggt ggtaaaaatt cagtttttat ggcattttgc ttagcaagct cttcataata
     5101 tacatttgat tttatactca aataatacac acgacttaat aaaaatataa aaaacaatag
     5161 tataaatcca acaactaaac gcattctcat ttaaatttta cctttaaaaa acacataagc
     5221 taaacaacat tctataaaaa ctgaaacaat atacgcccat cctaaaattt taattttttc
     5281 atctccaata taagacaata tcatatccaa aaacaaaata atgccgtaag cacaaagcac
     5341 aaaaacaaca gggataaatt taccaatttt taaatttgtc ttaatccaat ctgcacaaag
     5401 ataataaaaa ataaaaaatg ccaaccaaga tgaaaaaata aaaaaattat aagttatatc
     5461 agtaaaaaat aaaaaaaata aagaaaaata ccatctaaaa tcaagctttg aaaaagttct
     5521 ttctctctct tctagtaagc aaaacatata acagaaaaaa atcccataaa gtaacggggt
     5581 atatacaaaa gtcgaaccaa gaatctgata aattagaaaa aaaaatccta aaaagacata
     5641 agctccatta aattttgctt tataagcact taaatttctt ctcatttatc aagacctaaa
     5701 gtttgattga taataatatc ttctaaagaa tcaaggccaa atttattcaa atttgaaact
     5761 aaaatagagt ctttaaattc attttttaac ttagcttttt cactttgatt taatttatcg
     5821 catttggtaa aaacttttaa aattttttga tcaggtcgta aaaatctttt caaatagtca
     5881 tttaaattta catcgatctc taaatgagta tgtcttgagt cgattaaatg tataaataac
     5941 tttatcgagg ttcttaattt taaaaattca tctaagtttt gattccatat ttcttttaaa
     6001 tttttagaaa cctttgcata accaaaccct ggcaaatcga taaaattgat attaaatttt
     6061 tcttcatttc ttctgcaaat tacttcgaaa aaatttataa gctgagtttt tccaggagtt
     6121 gccgaacttt tggctaaatt tttttgttta cacaaagaat tgattaaaga actttttccg
     6181 acattagaac gccccaaaaa tgctacttca ctaaaatttg agctcaaatt ctcatcaaat
     6241 ttcactaaag aagtgataaa tttagcacta attatcattt gtctttaaga tcaaacacaa
     6301 aacgagcagg tttttgatcc ttactctcca ctcgataaat attagctttt ctatcgacta
     6361 ttattttatc accaaaaagt ttttgattgc ttccaagctc atttatataa gcatgaccat
     6421 taatctcgta agtatcttta ataacattat aaataaattt atctccacta cctttataag
     6481 ttttaccttt taaaacaatc ttaaacctag cattttgcat tgcttcataa cgaataggtt
     6541 tgcgattttt atccgtataa ataatcaatt tttcagaatt taaaatatca tcacctctaa
     6601 ttacttctac atttccacta agaatacttt cacccttatt ttcatctgag taaaaattta
     6661 aagcttttac ttcaatttga gttgcccaag ttacacttac acaaactaac aataaaatta
     6721 tttgtcttgc aaccacgcgt ttactccttg gatatttaaa attttgtttt ttacatcata
     6781 gtttaaagta tttccgttaa taatacttcc attgatcaga gctttaaaat tagtatttgt
     6841 gtgtaaaatt ttatccttag gttggtattc tacctcttga gaaataattt tgacattatt
     6901 agaacctata taagtaacat ttccttcaaa caaaaccttg ctcatatctt tattgaaaaa
     6961 ctctaaacga ttcgcgctaa gattaaaatc taaatttaaa gtaataaaat cattaaattc
     7021 atctctatct gcatatctca cccaagaatt tgccttataa tatgccttaa ttatactagt
     7081 attactctca taagctttca aatttttagc ctcaatattt ttaaaattta aagcattagt
     7141 ttgcaaattc aaagaatacg gatcttgcaa acttaaaatc gtaaaagtaa ttgtaaaaag
     7201 agcaattaaa attccaaaaa tttttatagc caaagcttat tccattcttc ttctagatga
     7261 tttttttcta ctaaaatttc tatcatctgt gctacagcag ccttaccacc ttttttgcta
     7321 agcactatgt ctacatttaa atctttatga ccatcttttg gcttaaaact aagtcctaca
     7381 ctttcaagca aagccttatc gttaaaataa tctccaatag ccgcacactg agaaaaatct
     7441 aaattaagtt tttgtaaaat ttcttttgca caagctaact tatccttgat accttgatat
     7501 aaaattttta tttttaaatc tttagctctt ttttcaacac aaggacaatt tctacctgta
     7561 ataatagcaa tttttttacc aagctttagc caagcctcga tagccgctcc atcttttaca
     7621 ttaaattctt taataaattc tccattagaa gtataaataa tcttcccatc agttaaacag
     7681 ccatctacat ccaaaaaaat caattctgtc ataatttcta ctctcttaca acaaatgcac
     7741 ctgcaaatgc accacttgca gcaaaatccc ttgcttcatc ttcacttcta aagcctgtta
     7801 agaaaacgcg atttaaccca tccactgagc ttgtgcgtat agtagagcta taagttctat
     7861 aagttttata tcttgctgct atcgtttgtg ctccagctgg gtttttaaag gctccaattt
     7921 gaaccatgaa atttccacct tcataaattt gtccattatt tgcaatctct ccactatttc
     7981 catagtttac attagaatgt acaatattat tacccgaatt acttgatcca aaccctataa
     8041 cctcaagcct tactggagct gttcctgaag caatcatatc aatttgacta gcagctcctt
     8101 ttgataaatc tataatacga ttatttacaa aaggacctct atcattcaca cgaacggtaa
     8161 cttgacgatt gttatttaga ttggttactt ttaagatggt attcataggt aaagttttat
     8221 gagccgcggt taaagcattt tgattatagg tttcgccatt agaggttttc ttgccgtgaa
     8281 agcctggccc ataccaactc gcaataccat cagcagtttc gcctactgct acaacagtag
     8341 gataataagt tttaccgttg atagtataag gcttcattgt tcctttagtc cctgaagaac
     8401 taggactgct tttaaaatca tttgaaggat aatacacttg agcattatcc aagctagaaa
     8461 aaaaactagt gcctaaacaa ccactaaaaa ataaagcccc tagactaacg gctgacaact
     8521 ttagtgtaat tgtttttatt tgcattttta ttctccttga ttggtataat taatttttga
     8581 ttaatgctaa gatgattttt tgctatttta ttgaattctc gaatttcatc aacacttata
     8641 ttataatttt ttgctatttt atataaagag tcaccagact taacggtata agttcttgtc
     8701 ataggtatag ttgtatcaac cttcgcaagt ttttctgctt taaaattttt atcaaaaaat
     8761 gctactttat taagtggtat atacatataa taccctttac caggaggcgt aaaattatgt
     8821 ttaaattgtg gattatattt cttaaaagtt gcaagatcca tatttaaatt tttagctatt
     8881 tcttttaaag atgcagaaga aggcacatca acttttgcaa attcattgct taaagcataa
     8941 ttcattaaag acgcatcttt atctagtaaa aaatccctat cattagctaa aaaagcaagc
     9001 gttaaaatct ttcttataaa atttctagtt tctaaagaaa gatatttctt atcagggttc
     9061 aataaaacac ttaaatcatc acttcctgct tgcttgatag cttgtcttag cttgccattt
     9121 ccgcaattat aagctaaaag tgctaaatac catttgccaa attcttcttt taactctttt
     9181 aaataatttg tagcggcata agttgacttg accggatcac gcctttcatc aacataagca
     9241 tcgattctta aacccaaatt tctagctgtt ggttgcataa attgccaaac ccctacagcc
     9301 ttggcattag aaacactatg agttttcaag cctgattcaa ccatagctag atacaaaatc
     9361 tcatcaggaa cttcctgctg ggctaaaatt tttcttatca taggagtaac ttttgaaaaa
     9421 ttttgcatac tatctattaa agtttgagca tgttttgatt ttatatcttg ttgagtttgc
     9481 acaaaaatca aatcactaat aaaacttgga ttaatatcta aatttcttaa aacattcatt
     9541 tgtctttcat aaaattcagg agtattaatt tgcgcaaaaa gaaaattaaa acatattaaa
     9601 aaacacaata aaattttttt cattaataac ctttaaaaaa taatttttca gaattgttaa
     9661 aacaaatttc tagaagctct tttcttgata aattcaatac ttcacacatt ttgtttacta
     9721 caaattgagt taacaaaggt tcatttcttt taccacgata aggctctgga gtaagatatg
     9781 gagcatcagt ttcaagtagt agtttatctt ttggaatttt aggcaaaatc tcaactaatt
     9841 tcttagcatt tttaaaagtt aaaactcccc caataccaaa ataaaatccc tcttcaaaaa
     9901 gagttagcaa atgttcgctt gcattaaagc agtgtaaaac tcctcctaca agatccttag
     9961 aatacccatg taaaatctca taagtatcat gatttgcttc tcttgagtga atgataacag
    10021 gttttttaaa ttcaatagca agctcaagct gtgcaataaa aatctttttt tgattttctt
    10081 tttctttttg aatttcttca gcaagatcac ttttaaaacg gaaataatca agcccacatt
    10141 cacctacagc tacacacttt tcatcgcata aatactgtct taaaattttc tcatcataat
    10201 tatcaatttc ataaggatgc acccctgctg caaaaaaaat atttttatat ttatgagcaa
    10261 ttgtagctgc ataaggcaag tcttttatat cagcaccagg tatgatgatt ttctctatac
    10321 catttttaaa agcacgattt aaagtttcat ctaaatcatc tttaaatgct tcactgtcta
    10381 gatggcaatg cgtatcaaca atccttaaac catcttgaaa atcaagattt aagaacatac
    10441 ttcaactcta tccttgccat tatcttttgc ttgagacaat attttacttg ctttatcagc
    10501 caaagaatca atcttatctc cactttttcc aaaaaccacg cctatagaag ctgtaaaaaa
    10561 gacttcatct aaattaacta aaacaccagc cttttttata tttactcgta tacgagaaaa
    10621 gattttaatc gctctttctt gggatatatt tttaagcaaa atacaaattt tttctgcact
    10681 atatctacct acaagatctc ttcctttagt ttcattgact atttcattgg cgcagatttt
    10741 aattacttca tcaccaactt cacggccgta ttcatcgtta atcatttgaa gattatctat
    10801 atctaagaaa gcaaaagcaa attcctcgtc ttttgttgct atttcgttaa aataatcatc
    10861 tattccatcg attaaagcat tataattttt aaccccagat acaggatcta aaacattata
    10921 agtgcttaaa aattttttat catccatgta agataaacaa cgatctaagc gacaattaaa
    10981 actttctttg cttaaaggct taaacaaata ctcattaact ccatttttaa aagaattcgc
    11041 ttcaaatgaa tcattatgat cccccaaaag aatcacacct aattcatcgt cactaaaacg
    11101 ttctcttact tgagtcaaaa gctcaaaacc gctaattact ggcatattga catctgctat
    11161 aataagctta acatcattat tatcatttaa ataactcatt gcttcttcac catgagctgc
    11221 agctaaaaca ttaaattgtc tttgagtaag tattttttta atttcattac gttcaggtag
    11281 cttgctcata gctaaaatca ctttagtttt tgcatattga ttaagtttta caatagaact
    11341 aataatctca tcaatgcaag tttcactttc tttaaaaata taatctaata tatctttatc
    11401 cataaatttt tctttagtag ccttatcacc actagccgta agaacaatag caggaatttt
    11461 cttttctata acataatcca caacttcacc atttggggca tctggcaagc ataaatccac
    11521 aaaagctaaa aaataatcat tattcattaa ctccttagct tcagcaaaac caaaagcaat
    11581 atctacctca tagtctaaag tcatttgaat ttttttagcc aaaagtttgc cgagcatttt
    11641 attgtcatca ataattaaaa ttttcttatt catag
//
LOCUS       DAPIYB010000056        11206 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.057, whole genome shotgun sequence.
ACCESSION   DAPIYB010000056 DAPIYB010000000
VERSION     DAPIYB010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11206
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.057"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            38..1030
                     /locus_tag="RJ318_001213"
     CDS             38..1030
                     /locus_tag="RJ318_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopenicillin N synthase family oxygenase"
                     /protein_id="HDV7431078.1"
                     /translation="MNLPILDLQAYEKDKSTFLKNLREIASKIGFFYLINTSIDKNLN
                     EKLFKLGKEFFNLSRSSKELISMVHSPQFRGYTSEGFEYTAGSKDYREQLDIGTERDA
                     LNWNLNSPLWQRLEGPNLWPSEIPELKKTFLTWHKQTKKACLKLLKAFAQALDLPNNA
                     FDKLYGENSYEHCKIIHYPKSSKNITQGVGSHKDGGLITFVFQEKQSGFEAFIDGKWL
                     SIPPLENSVVVNIGEFLELATNGYLKATIHRVNLSPKERFSIAYFLGVQLDKDIPIFK
                     LNPELAKESKGVDTDPKNPLLRNVASNYFKRMIRSHPDVASIYHSDLIEKFSFA"
     gene            1041..1811
                     /locus_tag="RJ318_001214"
     CDS             1041..1811
                     /locus_tag="RJ318_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDV7431079.1"
                     /translation="MTLFTKAFCVATLFTGFAWANEELKVGSSITPHADILRFIKSAL
                     QKQGYDLKIYEFNDGVIPNVMVENGELDANYFQHEPYLKEFNQRQGTHLVKVASIHIE
                     PMAVYSKKHKEFHPKEGQSISIPNNPTNESRALRIVASKGLIEVKDNELITPLDITKN
                     PKKLKFVELKDAQLTRSLDDVDYSLINSNFAILAGLNPVKDGLYTESKYSEYGNIIAV
                     KEGNENLPKIKALVKALQSNEVKKFIEEKYQGALIPTF"
     gene            1823..4087
                     /gene="metE"
                     /locus_tag="RJ318_001215"
     CDS             1823..4087
                     /gene="metE"
                     /locus_tag="RJ318_001215"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDV7431080.1"
                     /translation="MKNSIISYPRIGANRELKFAIEKYFKNQSSKEELLKSAKDLRIR
                     HWQEIQKAGIDFIPSNDFSLYDNVLDAAVLFNIVHTKYKNLNLDALDEYFAQSRGYQG
                     ENGDVTALAMKKWFNTNYHYLVPECDNADIIALTGDKIFKEYLEAKELGIESKPVLIG
                     IFTLFKLIAFKDEKTQKLAKEKLLNAYIELFDKLNELKVTWLELDEPYLVYDLSKEDI
                     ALFEEFYQELLNHKKDLKILLQSYFGDLRDIYPKLLESKFDALGLDFIEGKQSLALVQ
                     QYGFAKDKILFAGLINGKNIYANDYAKSLKLIKELQKYTQNIILNTSCSLLHVPYSTE
                     FESKLDSSYLKLFAFAKEKLQELKDLKEILNSSEENPLFRANQELFKNIPERLDEKVK
                     ARLKALKKEDFTRTPSFKERALIQKEFLKLPLLPTTTIGSFPQSADVRSNRLAFKQEK
                     ISAQNYTEFNQQKIKECIQIQEEIGLDVLVHGEFERNDMVEYFGENLKGFLFTQNGWV
                     QSYGTRCVKPPVIWGDVSRTKPITLAWSKFAQSLSQKIVKGMLTGPVTILNWSFPRED
                     ISLKESTEQIALAIRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPA
                     FNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLKAIRF
                     KTEVGPGVYDIHSPRVPSVEELSLTIEKILNKLPKEQIWINPDCGLKTRAYEEVITSL
                     KNLVTATQKIREQL"
     gene            4097..4945
                     /gene="metF"
                     /locus_tag="RJ318_001216"
     CDS             4097..4945
                     /gene="metF"
                     /locus_tag="RJ318_001216"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HDV7431081.1"
                     /translation="MCSFSFEVFPPRKDENIKNLHAILDDLGQLSPNFISVTFGAGGS
                     INSQNTLEVASLIQEEYQIPSIVHLPCIHSSKEKITQILQKCKEKNLNQILALRGDIC
                     ENLKKSKDFSYASDLISFIKKQEYFEIYAACYPEKHNESKNFIEDIHHLKTKVNAGTD
                     KLITQLFYDNEDFYTFKQNCALADIDIPIYAGIMPITNKRQVLKISQLCGAKIPPKFV
                     KILEKYENNTLALEDAGIAYACDQIVDLITSGVDGIHLYTMNKSKAAIKIYEAVKHLL
                     KEELHA"
     gene            complement(4967..5158)
                     /locus_tag="RJ318_001217"
     CDS             complement(4967..5158)
                     /locus_tag="RJ318_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431082.1"
                     /translation="MIYILEFFKGASLALMLFGALFFFFKYNSFFYLCLGIIPGLLLS
                     LIFVLLIENHKLKNENKLR"
     gene            complement(5155..5835)
                     /locus_tag="RJ318_001218"
     CDS             complement(5155..5835)
                     /locus_tag="RJ318_001218"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDV7431083.1"
                     /translation="MKDLFLFSSLLDASHTFSYFFHIGLVALIAVIVAMMATRSMQLV
                     PRGMQNLGEAFLEGVLSMGRDTMGSEKGARKYLPLVATLGIIVFFSNIIGIIPGFHAP
                     TASLNLTLSLAIIVFVYYHFEGIRAQGFVKYFAHFMGPIKLLAPLMFPIEIVSHLSRV
                     VSLSFRLFGNIKGDDLFLMVILALVPYIAPLPAYVLLTFMAFLQAFIFMILTYVYLAG
                     ATVVEEGH"
     gene            complement(5904..7244)
                     /gene="radA"
                     /locus_tag="RJ318_001219"
     CDS             complement(5904..7244)
                     /gene="radA"
                     /locus_tag="RJ318_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDV7431084.1"
                     /translation="MAKNKALFECQACGNQQSKWLGKCPDCGAWDSFVELKAEQIKVL
                     KELAQVSMKTSEAVCIEDVELEHFTRYSTDDNELDLVLGGGLVEGSLVLIGGSPGVGK
                     STLLLKIASNLAKQGKKVLYVSGEESKAQIKLRADRLEANTPNLFLLTELCLENILEE
                     LHKKDYSILIVDSIQTLYSNKITSAAGSITQVREITFELMRVSKAYNISTFIIGHITK
                     EGAIAGPRVLEHMVDVVLYFEGDATKEIRLLRGFKNRFGGTNEVGIFEMTAKGLISAK
                     DLANRFFTRGKAISGSALGVVMEGSRALVLEVQALVCESSYPKRSATGYEKNRLDMLL
                     ALLERKLEIPLGHYDVFVNISGGVKVSETAADLAVVAAIISSFKNRPLSKDSIFIGEL
                     SLNGEIREVFSLDTRLKEAKMQKFKNAIVPSKPLEDIGLKCFVAKELSQVLEWM"
     gene            complement(7244..8110)
                     /gene="ftsY"
                     /locus_tag="RJ318_001220"
     CDS             complement(7244..8110)
                     /gene="ftsY"
                     /locus_tag="RJ318_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDV7431085.1"
                     /translation="MFNFFKKGLAKTLENIVGVKGENKKITKDLLEEILLEADVSYEI
                     VEEIIYYLPPQNEVKKEDLKRVMGSYFLYEKKETNQEKPFVELILGVNGAGKTTSIAK
                     LAYLYKNQNQKVILGACDTFRAGAIEQLKLWAQKVDVDIVLTAQGHDPSAVAFDTISK
                     AKAKDFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGI
                     LQAKAFNELVKLDGVIITKLDGTAKGGALFSIARELELPIFYVGVGEQMTDLQEFNAS
                     AYLDTLLDPIFE"
     gene            complement(8110..8667)
                     /locus_tag="RJ318_001221"
     CDS             complement(8110..8667)
                     /locus_tag="RJ318_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDV7431086.1"
                     /translation="MKIKKILLLVAISCLFVACSNDKEKQQNDVNLSTEASINQSDDM
                     NFKLNLIDGGSISVKKENAVLNFNDEDKVTLFVFFTTWCTPCIAEIPHLNKLQEKYNN
                     DFNIVGVLLEDKSNDEIQKFIEQHKISYKVANGENNYLLAKALGGVNGIPTMFLYNKH
                     SKLINQYLGLIPEEMLEIDIQKAIL"
     gene            8750..9376
                     /locus_tag="RJ318_001222"
     CDS             8750..9376
                     /locus_tag="RJ318_001222"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDV7431087.1"
                     /translation="MEKTDFRALQKIRLFKHSKLNFKQDYKIFKECLKIIKLFKAKNI
                     LIFIPLHYEPNLIKFRHILNKNYKLFVPFMQDKSLKIVKLRLPFIKKRFGVLEPIDSF
                     FKAKIDLAIVPVIGVDKNLKRIGHGQGFYDRFFENLNYKPHIIFIQSIDALSQNNLTQ
                     KHDISGKLYINPYKKYYKKERKNDRITYRTYSRYSRTRYRIFSCKKNQ"
     gene            9297..10850
                     /gene="rny"
                     /locus_tag="RJ318_001223"
     CDS             9297..10850
                     /gene="rny"
                     /locus_tag="RJ318_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HDV7431088.1"
                     /translation="MIESLIALIAAIVGLGIGYLVAKKINDAKYEIFVEQAKAKAKAI
                     EYEAELILKDAKNSILNAELEVKKKYEEKTHKFQKDFNQKFDDLSKKEQKLQQEEEKL
                     KEDKEYLCKSQKHIQNLQSDVDKLKNKYQEKLDDVLKILEHSTGLTQNEAKEIILKKV
                     EENSREQIAHIVRKYEEEAKNEAKRKANFIIAQATSRFAGEFAAERLINVINIKNDEL
                     KGRIIGKEGRNVKTLEMVLGVDIIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGRI
                     QPARIEEIHEKVCKEFDSAILEEGETIVMDLGLNKIHPEIVKLIGKLKYRASYGQNAL
                     AHSLEVAHLAGIIAAECGGDENLARRAGILHDIGKALTHDFEGSHVDLGAELCKRYKE
                     HPVVINAIYAHHGHEEATSIESAAVCAADTLSAARPGARREVLEAFLKRVSELEDIAK
                     SKEGIKNAYAINAGREIRVIANAQLVNDDESVLLAKEIAAEIQEKMQYPGEIKVNVIR
                     ELRAVEYAK"
     gene            10859..>11206
                     /locus_tag="RJ318_001224"
     CDS             10859..>11206
                     /locus_tag="RJ318_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDV7431089.1"
                     /translation="MQDMIDTLIKYGYIVLFFYSLGGGMVGILAAGVLSSQGKMDLSF
                     CIALAFIANTIGSTLLFILGKYYKKDIMPYFKKHRRKIALAMIKTKQHGIILLVTQKF
                     IYGLKTFIPIAAGI"
BASE COUNT         4147 a         1868 c         1698 g         3493 t
ORIGIN      
        1 tatcttctta tccttaattt taatttaagg agcaaaaatg aacttaccta tacttgattt
       61 acaagcttat gaaaaagata aaagcacttt tcttaaaaat ttaagagaaa ttgcttctaa
      121 aataggtttt ttttatctta tcaataccag tatagataaa aatttaaacg agaaattatt
      181 caaacttggc aaagaatttt ttaatctttc tagaagttcg aaagagctta tttctatggt
      241 acattctcct caatttagag gttatactag cgaaggtttt gaatacacag caggatctaa
      301 ggattataga gaacaactgg atataggcac agaaagagat gctttaaact ggaatttaaa
      361 ctcaccctta tggcaaagac tagaaggtcc taatctttgg cctagtgaaa ttccagaact
      421 taaaaaaact ttcttaactt ggcacaaaca aaccaaaaaa gcttgtttaa agcttttaaa
      481 agccttcgct caagctcttg atctacctaa caatgctttt gataaacttt atggagaaaa
      541 ttcttacgaa cattgtaaaa tcatacatta tccaaaaagc tcaaaaaata tcactcaagg
      601 cgtaggttca cataaagatg gtgggcttat cacttttgtt tttcaagaaa aacaaagcgg
      661 atttgaagct tttatagatg gtaaatggct tagtataccc ccacttgaaa atagcgttgt
      721 agttaatata ggagaatttt tagaactagc taccaatggc tatttaaaag ctactattca
      781 ccgcgtgaat ttaagcccaa aagaacgctt tagcatagct tattttcttg gagtgcagct
      841 tgataaggat atacctattt ttaagttaaa tccagagctt gctaaagaaa gtaaaggtgt
      901 ggatactgat cctaaaaatc cacttttaag aaatgttgca agtaattatt ttaaaagaat
      961 gatacgctct catcctgatg tggcaagtat ttatcatagt gacttgatag aaaaatttag
     1021 ttttgcgtaa aggagaaaaa atgactttat ttactaaagc tttttgcgtc gctactcttt
     1081 ttaccggttt tgcatgggca aatgaagaac ttaaagttgg ctcttctata acacctcatg
     1141 cagatatttt aagatttata aaatcagcac ttcaaaaaca aggttatgat ttaaaaattt
     1201 atgaattcaa tgatggagta atccctaatg taatggttga aaatggtgag ttagatgcta
     1261 attattttca gcatgagcct tatttaaaag aattcaatca aagacaaggc acccatcttg
     1321 taaaagttgc cagtatccat atagaaccta tggcagtgta ttctaaaaaa cacaaagaat
     1381 ttcaccccaa ggaaggacaa agcatttcta tacccaataa tcctacaaat gaaagccgtg
     1441 ctttacgcat tgtagcaagc aaaggactta tagaagttaa ggataatgag ctcatcactc
     1501 ctttagatat cactaaaaat cctaagaagc ttaaatttgt agagttaaaa gacgctcaac
     1561 ttacaaggag tttagatgat gtagattatt ctcttattaa tagcaatttt gctattttag
     1621 caggtttaaa ccctgtaaaa gatgggcttt atacagaaag taaatatagt gaatatggca
     1681 atatcatcgc cgttaaagaa ggtaatgaaa accttcctaa aatcaaagcc ctagtaaagg
     1741 ccttgcaaag caatgaagtt aaaaaattta tagaagaaaa atatcagggt gctttaatcc
     1801 ctacatttta aggagaacaa atatgaaaaa ttcaatcatt tcttacccaa gaataggtgc
     1861 aaatagagaa ttaaaatttg ctattgaaaa atactttaaa aaccaaagtt ctaaagagga
     1921 gcttttaaag agtgctaagg atttaaggat tagacactgg caagaaattc aaaaagctgg
     1981 cattgatttt atccctagta atgatttttc actttatgat aatgtcttag atgcagctgt
     2041 gctttttaac attgttcata caaagtataa aaatttaaat ttagatgctt tagatgaata
     2101 ctttgctcaa agtcgaggtt atcaaggaga aaatggagat gttacagcct tagcaatgaa
     2161 aaaatggttc aatacaaatt atcattattt ggtgcctgag tgcgataatg ctgatattat
     2221 agctttaaca ggggataaaa tttttaaaga atatctcgaa gctaaagagc ttggcataga
     2281 aagcaagcct gttttaatag gcattttcac actttttaaa ctcattgcct ttaaagatga
     2341 aaaaactcaa aaactcgcca aagaaaagct tttaaacgct tacatagagc tttttgataa
     2401 actaaatgaa cttaaagtaa catggcttga acttgatgag ccttatttgg tttatgattt
     2461 aagcaaggaa gatatcgctt tgttcgaaga attttaccaa gaacttttaa atcacaaaaa
     2521 agatcttaaa attttacttc aaagctattt tggagactta agagatattt atcctaaact
     2581 tttagaaagc aaatttgatg ctttggggct tgattttatc gagggaaaac aaagcttagc
     2641 cttagtccaa caatacggtt ttgctaaaga taaaatcctt tttgcaggtc ttattaacgg
     2701 caaaaatatc tatgctaatg attatgctaa aagcctaaag cttattaaag agcttcaaaa
     2761 atatacacaa aatatcatct taaacacttc ttgctcactt ttacatgtgc cttatagcac
     2821 tgaatttgaa agcaaattag attcaagcta tcttaaactt tttgcctttg ctaaagaaaa
     2881 acttcaagaa cttaaagatt taaaagaaat tctaaattct agcgaagaaa atccgctctt
     2941 tagagccaat caagagcttt ttaaaaatat cccagagcgt ttagatgaaa aagtcaaagc
     3001 aaggcttaag gccttaaaaa aagaagattt taccagaacg cctagtttta aagaacgcgc
     3061 cttaatccaa aaagaatttt taaaactccc tcttttacca accacaacca taggttcctt
     3121 tcctcaaagt gccgatgtaa gatctaatcg ccttgccttt aagcaagaaa aaatttcagc
     3181 tcaaaactac actgaattta accaacaaaa aatcaaagaa tgcatacaaa ttcaagaaga
     3241 aataggactt gatgttttag tgcatggaga atttgaaaga aatgatatgg tggagtattt
     3301 tggagagaat ctaaagggct ttttatttac tcaaaatggt tgggtgcaaa gctatggcac
     3361 aaggtgcgtt aaacctcctg tgatttgggg tgatgtatca cgcacaaagc ctatcacctt
     3421 agcttggtct aaatttgcac aaagtttaag tcaaaaaatc gtaaaaggta tgctaactgg
     3481 acctgtaacc atacttaatt ggtcctttcc aagagaagac atcagtctaa aagaaagcac
     3541 tgagcaaatt gccttagcta taagagatga agtgttagat cttgaaaatg caggtataaa
     3601 aatcatacaa attgatgaag cggctttgcg tgaaaaactg cctttaagaa aaagtgattg
     3661 gcatagtgag tatttagatt gggctattcc tgcttttaat cttgtgcata gcggggtaaa
     3721 agctaaaact caaattcaca ctcatatgtg ttatagtgaa tttagtgata tcttaaaaga
     3781 aattgacgct atggatgctg atgtgatttc ttttgaagct tcaagatcaa acttaagtct
     3841 tttagatacc ctaaaagcta ttcgttttaa aactgaggtg ggaccaggag tttatgatat
     3901 acatagccct agagttccaa gcgtagaaga attaagttta actatagaaa aaattttaaa
     3961 caaattacct aaggagcaaa tttggatcaa tccagactgc ggacttaaaa caagagccta
     4021 tgaagaagtt ataacctctc ttaaaaattt agttacggct acgcaaaaaa tacgagaaca
     4081 attataagga gttttcatgt gtagtttttc ttttgaagtt tttccaccaa gaaaggatga
     4141 aaatatcaaa aatcttcatg ctatcttaga tgatttaggg caattaagcc ctaattttat
     4201 cagcgtaacc tttggagctg gaggctctat taactcacaa aatactttag aagttgcaag
     4261 cttaatccag gaagaatatc aaattcctag catagtacat ttaccttgca tccattctag
     4321 taaagaaaaa atcactcaga tacttcaaaa atgcaaagaa aaaaatctta atcaaattct
     4381 tgccctaaga ggcgatatat gtgaaaattt aaaaaaaagc aaagattttt cttatgctag
     4441 tgatttaatt tcttttataa aaaaacaaga atactttgaa atttatgccg catgctatcc
     4501 cgaaaaacat aatgaatcta aaaatttcat cgaggatata caccatctta aaactaaggt
     4561 aaatgcagga acagataagc tcattactca acttttttac gataatgaag atttttatac
     4621 ttttaaacaa aattgtgctt tagcagatat tgacatacct atttacgcag gtattatgcc
     4681 tattactaac aaaagacagg ttttaaaaat ttctcaactt tgcggagcta aaatccctcc
     4741 taaatttgtt aaaattttag aaaaatatga aaataatact ttggctttag aagatgcagg
     4801 tatcgcgtat gcttgcgatc aaattgtcga tttaatcaca agtggtgtag atggaattca
     4861 tctttatact atgaataaat ccaaagcggc tattaaaatt tatgaagctg taaagcattt
     4921 gcttaaagaa gagcttcatg cttagaaaat aaactatttt ttgcttttat cttaacttat
     4981 tttcattttt tagcttatgg ttttctataa gtaaaacaaa aattaaagat aaaagcaaac
     5041 ctggtataat acccaagcaa agatagaaaa aagaattata tttaaaaaag aagaaaagtg
     5101 caccaaaaag cattaaagct aaagatgcac ctttgaaaaa ttctaaaata tagatcaatg
     5161 accttcctca acaacagttg cacccgctaa atatacataa gttaaaatca taaaaataaa
     5221 agcttgtaaa aatgccataa aagttaaaag cacataagca ggaagtggag ctatataagg
     5281 aactaaagct aaaattacca ttaaaaataa atcgtcgcct ttaatatttc caaacaaacg
     5341 gaaggacaaa gaaaccacac gagaaagatg agagactatc tctataggaa acatcaaagg
     5401 agctaaaagt ttaataggtc ccatgaaatg agcaaaatac tttacaaaac cttgtgccct
     5461 aataccctca aaatgataat atacaaaaac tataatagcc aaggacaaag tcaaatttaa
     5521 acttgcagtt ggagcgtgaa aaccaggtat tatacctata atattactaa aaaacactat
     5581 aatccccaaa gttgcaacca aaggaagata ttttcttgca cctttttcac ttcccatggt
     5641 atctctaccc atagataaaa ctccctctaa aaaagcctca cctaaatttt gcataccgcg
     5701 tggaacaagt tgcatagaac gagtagccat catagccact ataacagcaa ttaaagctac
     5761 caaacctatg tgaaaaaaat aagaaaaagt atgacttgca tcaagcaaag agctaaataa
     5821 aaataaatct ttcatggttt cctcaaaaat tttattctaa actcgaaatt ttagcaaaat
     5881 cttacttata ttttaatgaa aatttacatc cattctaaaa cttgcgaaag ttctttagca
     5941 acaaaacact taagccctat atcttccaaa ggcttagaag gaacaatggc atttttaaat
     6001 ttttgcattt tagcttcttt taaacgcgta tcaaggctaa aaacctctct aatttctcca
     6061 tttaaactaa gctcccctat aaaaatacta tctttgctca aagggcgatt tttaaaactt
     6121 gaaataatag ctgcaaccac agccaaatcc gccgcagttt cgcttacttt tactccgcca
     6181 ctaatattta caaatacatc ataatgcccc aaaggaattt caagctttct ttcaagcaaa
     6241 gccaaaagca tatctaagcg atttttttca tagcccgtag cgctgcgttt tggataagaa
     6301 ctttcacaca ccaaagcttg aacttctaaa accaaagcac gagatccctc cattacaaca
     6361 cctaaagcac ttcctgaaat agcctttcca cgagtaaaaa aacgatttgc caaatctttt
     6421 gcactgatca aacccttagc agtcatctca aaaataccta cttcattcgt tccaccaaaa
     6481 cgatttttaa agcctcttaa aagtctgatt tctttagtgg catctccctc aaaataaagc
     6541 accacatcta ccatatgctc aagaactcta ggtcctgcta tagcaccttc tttagtaatg
     6601 tgccctatga taaaagtact gatattataa gccttactca cacgcataag ctcaaaagta
     6661 atctcacgca cctgagtgat gcttcctgct gctgaagtga ttttatttga atatagagtt
     6721 tgtatagaat caacgataag aatgctataa tcttttttgt gcaattcttc taaaatattt
     6781 tcaaggcaaa gttcagtaag taaaaataaa ttcggagtat tagcctcaag acgatcagct
     6841 cttaatttaa tctgggcttt actttcttcg ccactgacat aaagcacttt tttaccctgt
     6901 ttagctaaat ttgaagcaat ttttaacaaa agcgtagatt ttcccacacc tggacttccg
     6961 cctataagca ctaaagaacc ttcaacaagc cctccgccta aaaccaaatc aagctcatta
     7021 tcatctgtgc tgtatcttgt aaaatgctct aactccacat cttcaataca aacagcctca
     7081 cttgttttca tgctaacttg cgcaagctct tttaaaactt taatttgctc agcttttaat
     7141 tctacaaaac tatcccaagc tccacaatca ggacattttc caagccattt gctttgttga
     7201 tttccacaag cttgacattc aaaaagtgct ttattttttg ccattattca aaaataggat
     7261 ctaataaagt atctaaataa gcacttgcat taaattcttg taaatccgtc atttgctcac
     7321 ccacgcctac ataaaaaata ggaagctcaa gctctcttgc tatactaaaa agtgcacccc
     7381 ctttagctgt cccatcaagc tttgtgataa tcacaccatc aagttttaca agctcattaa
     7441 aagctttagc ttgtaaaatt ccagcatttc cctgtgttcc atctaaaact aaaatttttc
     7501 tatggggtgc gccttctaaa gctttgtttg aaattcttac aattttttca agctcatgag
     7561 ctaaattttt ttgattttgc aaacgccctg ctgtatcgat aataactcta tcaaaatcct
     7621 ttgcttttgc tttagaaatg gtatcaaaag caaccgctga aggatcatgc ccttgtgcag
     7681 ttaaaactat atctacatcc actttttgcg cccaaagttt taattgctca atcgcacctg
     7741 ctctaaaagt atcacacgct cctaaaatca ctttttgatt ttggtttttg tataaataag
     7801 caagcttggc aatacttgtt gtttttcctg ctccatttac tcctaaaata agctctacaa
     7861 aaggtttttc ttgattggtt tctttttttt cataaagaaa ataagaaccc ataacacgct
     7921 ttaaatcttc tttttttact tcattttgag gtggtaaata ataaattatc tcttcaacta
     7981 tttcataact tacatctgct tcaagcaaaa tttcttcaag caaatctttg gttatctttt
     8041 tattctctcc tttaactcca acaatatttt caagagtttt tgcaagtcct tttttaaaaa
     8101 aattaaacat taaagtatag ccttttgtat atcaatttct agcatttctt caggaataag
     8161 ccctaaatac tgattaatca atttagaatg cttgttgtaa agaaacatgg taggaattcc
     8221 atttacccca cctaaagctt tagctaaaag atagttattt tcaccattag cgactttata
     8281 agatatttta tgctgttcta taaatttttg aatctcatcg ttagatttat cttctaataa
     8341 aaccccaact atattaaaat cattattata cttttcttgt aatttattaa gatgagggat
     8401 ttcagcaatg caaggggtac accaagtggt aaaaaataca aacaaagtta ccttatcttc
     8461 atcgttgaaa tttaaaacgg cattttcttt tttaactgaa attgatcctc catcaatcaa
     8521 attaagttta aaattcatat catcactttg atttatactt gcctcggtgc ttaaatttac
     8581 atcattttgc tgcttttctt tatcattgct acaagcaaca aacaaacaag atattgccac
     8641 tagtaaaagt atttttttaa tcttcattat ttatcaatcc tttattattc tttataaaaa
     8701 tgctaaaatt ataacataca taagataata tttttttaaa ggcatattaa tggaaaaaac
     8761 agattttagg gcattgcaaa aaatacgcct tttcaaacat tcaaaactaa atttcaaaca
     8821 agattataaa atatttaaag aatgtcttaa aataataaag ctatttaaag ctaaaaatat
     8881 tttaattttt attcctttgc attatgaacc aaacttaata aaatttcgcc atattcttaa
     8941 taaaaattac aaactttttg ttccatttat gcaagataaa agtttaaaaa ttgtaaaatt
     9001 aagattgcct tttattaaaa aaaggtttgg ggttttagag cctatagatt ctttttttaa
     9061 agcaaaaatt gatttagcta ttgtgcctgt aattggcgtc gataaaaatt taaaaagaat
     9121 aggacatggg caaggttttt atgatagatt ttttgaaaat ttaaattaca aacctcatat
     9181 aatatttatc caaagtatag atgctttaag tcaaaataat ctaacacaaa agcatgatat
     9241 ttcaggaaaa ttatacataa acccttataa aaaatattac aagaaagaaa gaaaaaatga
     9301 tagaatcact tatcgcactt atagccgcta tagtcggact cggtatagga tatttagttg
     9361 caaaaaaaat caatgatgcc aaatatgaaa ttttcgtaga acaagccaaa gctaaagcca
     9421 aagctataga atacgaagcg gagcttattt taaaagatgc aaaaaattca attcttaatg
     9481 cagaattaga agttaaaaaa aaatacgaag aaaaaactca caaatttcaa aaagatttta
     9541 atcaaaaatt tgatgatctt tctaaaaaag aacaaaaact tcagcaagaa gaagaaaaac
     9601 taaaagaaga taaagaatac ctttgcaagt cacaaaaaca cattcaaaac ttacaatctg
     9661 atgttgataa attaaaaaat aaatatcaag aaaaacttga cgatgtttta aaaattttag
     9721 aacattcgac aggacttaca caaaatgaag ccaaagaaat cattcttaaa aaagtagaag
     9781 aaaattctcg cgagcaaatt gcacatatag taagaaaata tgaagaagaa gcaaaaaatg
     9841 aagctaaaag aaaagctaat ttcatcattg ctcaagctac ttctcgtttt gcaggtgaat
     9901 ttgcagctga aagacttatc aatgttatta acattaaaaa cgatgaactt aaaggacgta
     9961 tcattggtaa agaagggcgc aatgttaaaa ccttggaaat ggttttaggt gttgatatta
    10021 tcatcgatga tacaccaggt gctattatag taagttgttt taatctttat cgccgtgcta
    10081 ttgctacaaa agttatagaa cttttagttg aagatggcag aattcaaccc gcgcgcatag
    10141 aagaaattca cgaaaaagtg tgtaaagaat ttgatagtgc cattctagaa gaaggcgaaa
    10201 ccatagttat ggatctaggt ttaaataaaa tacaccctga aattgtaaaa ctcataggaa
    10261 aactcaaata ccgagcaagc tatggacaaa acgctttagc acattctttg gaagtggctc
    10321 accttgcagg aatcattgct gctgagtgtg gtggagatga gaatttagca cgtcgtgcgg
    10381 gaattttaca tgatatagga aaagcattaa cccatgattt tgaaggatct catgtggatt
    10441 taggtgcaga actttgcaaa cgctacaaag agcatcctgt agtaatcaat gctatttacg
    10501 cacatcatgg acacgaagaa gctacaagca tagaatcagc agctgtttgt gcagcagata
    10561 ctttaagtgc tgcacgacct ggagctagaa gagaagtgtt agaagctttc ttaaaaagag
    10621 tcagtgagct agaagatatc gctaaaagta aagaaggaat taaaaatgcc tatgcaatca
    10681 atgccggaag agaaattcgc gtcatagcca atgctcagct tgttaatgat gatgaaagtg
    10741 tacttttagc taaggaaata gcagctgaaa ttcaagaaaa aatgcaatat cctggtgaaa
    10801 ttaaagtcaa tgttatacgt gaacttagag ctgtagaata cgctaaataa ggtttattat
    10861 gcaagatatg attgatactt taataaaata tggttatatt gttttattct tttactcttt
    10921 agggggcggg atggttggaa ttttagctgc aggagtttta agttctcaag gaaaaatgga
    10981 tcttagtttt tgcattgctc ttgcttttat tgctaatacc ataggttcaa ctttgctttt
    11041 tatacttgga aaatattata aaaaagacat tatgccttat tttaaaaaac accgacgcaa
    11101 gatagccctt gctatgataa aaacaaaaca acatggaatt attttacttg taactcaaaa
    11161 atttatttat ggtttaaaaa ctttcattcc catagctgca ggtata
//
LOCUS       DAPIYB010000057        10969 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.058, whole genome shotgun sequence.
ACCESSION   DAPIYB010000057 DAPIYB010000000
VERSION     DAPIYB010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10969)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10969)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10969
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.058"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(22..678)
                     /locus_tag="RJ318_001225"
     CDS             complement(22..678)
                     /locus_tag="RJ318_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HDV7431090.1"
                     /translation="MSKIDEISSKSKANILEHLKKAYKETTFTRIESIDPVEHIQTTQ
                     DMLTEMKQKMSDNKYIVENATKDTLEEKINEIVAKYSFKSMIYGADLNLNLEQIKAEK
                     KICFDKEIENLRSEVFHSDFSIIHARAGVSSHGVALIPSSKTQPRMLSLAPKLCIVLL
                     KKENVVKSLSEALNLVKKENEILPTNILFIAGPSRTADIELITVFGVHGPQIAHIIIY
                     "
     gene            complement(671..2110)
                     /locus_tag="RJ318_001226"
     CDS             complement(671..2110)
                     /locus_tag="RJ318_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HDV7431091.1"
                     /translation="MSQKIPHEQIVQIKLNDKQMQENLMTAMHTLQKNRLNVIDARFK
                     DWQGLRAKAKQAKNNALMSLEERLLEFEKNATKNGIKVHWASSDEDACEIVYEIMKEK
                     NITKLLKGKSMASEEIGLNHYLEKKGLKAIETDLGELILQLNEEPPLHIVVPAIHRNR
                     HEIGEIFKEKLGANLENDEPESLNAVAREHLRKDFEGLKLGLSGVNFAMSREGAFWLI
                     ENEGNGRMCTTAPDIHIALCGIEKIMESFEDAATMVSLLTPSATGQFIPTYNNIITGP
                     RKNGDLDGPKEVHVILFDHNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQ
                     TTYPGPIGEVISPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLRCDKIGQ
                     GKNPPLGANNVHHNALEAFAFKQFKNIATNGDKWRFSLSKAHYFNWTVQNFASILPVI
                     KKWYAFKELPQIKMDLYKEVQKLEGVSYE"
     gene            complement(2107..2847)
                     /locus_tag="RJ318_001227"
     CDS             complement(2107..2847)
                     /locus_tag="RJ318_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDV7431092.1"
                     /translation="MMKKVYFYATCLGSTAMQQSVLNAIKLLRREGIEVIFKKNQTCC
                     AQPSFNSGYFDESREIALYNVDLFDKDYPIVVPSGSCAGMMSHDYKELFKNRPEFSKI
                     KTFSSRVIELSQYLDEVLKVDYEDKGVPIKVTWHSNCHALRVQKSIQASKNLIKKLKN
                     VELVELQYEEECCGFGGTFSVKEPEISNAMVRSKIKDIQNSGAKYLISGDGGCLLNID
                     GTMKRMGLDIKGIHLYDFLLKRLEGGRL"
     gene            complement(2971..4653)
                     /locus_tag="RJ318_001228"
     CDS             complement(2971..4653)
                     /locus_tag="RJ318_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDV7431093.1"
                     /translation="MEQILTWQQIYDPFSNIWLSALVAFLPILCFLVCLVVLKLKGYQ
                     AGFLTVILATLVALFAYKMPWNLVGASFIQGFTNGMWPIAWIIIAAIFLYKLSIKSGS
                     FEIIKKSVMSITPDHRIQVILIGFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLQAA
                     GLCLIANTAPVAFGAVGIPIIAMANLVGIEQHSVSAMVGRMLVPLSLTIPFFIVFLMD
                     GFKGIKETFPAILVAALSFTTTQFLSSNHLGAELPDIISAVVSLAVTTVFLKFWKPKN
                     IFRFDNESNFTQDNTLSFNQILKAWSPFILLIVCIIIWTQPWFKALFDKDGILSYTSI
                     TLQFSNITTGILSPSITGIGEAKPLSLALGVDLINGKTVAQAGTAILLAAFLTIAILK
                     IKAEDAAECFWVTLKEMAIPCITIGLVVAFAFISKNSGMSTTLGLAFAHTGDAFSFFS
                     PIIGWIGVFLTGSDTSANLLFGTLQQVSAQKLGISEALFLAANSVGGVVGKMISPQSI
                     AIACAAVGLVGKESDLFKFTLKYSVAFIILIGIWTCIIAFFLQGIIPEVIVK"
     gene            complement(4825..5394)
                     /gene="cdtC"
                     /locus_tag="RJ318_001229"
     CDS             complement(4825..5394)
                     /gene="cdtC"
                     /locus_tag="RJ318_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cj-CdtC"
                     /protein_id="HDV7431094.1"
                     /translation="MKKIITLFFMFITLAFATPTGDLKDFTEMVSIRSLETGIFLSAF
                     RDTSKDPIDQNWNIKEIVLSDELKQKDKLADELPFGYVQFTNPKESDLCLAILEDGTF
                     GAKSCQDDLKDGKLETVFSIMPTTTSAVQIRSLVLESDECIVTFFNPNIPIQKRFGIA
                     PCTLDPIFFAEVNELMIITPPLTAATPLE"
     gene            complement(5405..6202)
                     /gene="cdtB"
                     /locus_tag="RJ318_001230"
     CDS             complement(5405..6202)
                     /gene="cdtB"
                     /locus_tag="RJ318_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin nuclease subunit
                     Cj-CdtB"
                     /protein_id="HDV7431095.1"
                     /translation="MKKIICLFLSFNLAFANLENFNVGTWNLQGSSAATESKWSVSVR
                     QLVSGANPLDILMIQEAGTLPRTATPTGRHVQQGGTPIDEYEWNLGTLSRPDRVFIYY
                     SRVDVGANRVNLAIVSRMQAEEVIVLPPPTTVSRPIIGIRNGNDAFFNIHALANGGTD
                     VGAIITAVDAHFANMPQVNWMIAGDFNRDPSTITSTVDRELANRIRVVFPTSATQASG
                     GTLDYAITGNSNRQQTYTPPLLAAILMLASLRSHIVSDHFPVNFRKF"
     gene            complement(6199..7005)
                     /gene="cdtA"
                     /locus_tag="RJ318_001231"
     CDS             complement(6199..7005)
                     /gene="cdtA"
                     /locus_tag="RJ318_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cj-CdtA"
                     /protein_id="HDV7431096.1"
                     /translation="MQKIIVFILCCFMTFFLYACSSKFENVNPLGRSFGEFEDTDPLK
                     LGLEPTFPTNQEIPSLISGADLVPITPITPPLTRTSNSANNNAANGINPRFKDEAFND
                     VLIFENRPAVSDFLTILGPSGAALTVWALAQGNWIWGYTLIDSKGFGDARVWQLLLYP
                     NDFAMIKNAKTNTCLNAYGNGIVHYPCDASNHAQMWKLIPMSNTAVQIKNLGNGKCIQ
                     APITNLYGDFHKVFKIFTVECAKKDNFDQQWFLTTPPFTAKPLYRQGEVR"
     gene            7118..7351
                     /locus_tag="RJ318_001232"
     CDS             7118..7351
                     /locus_tag="RJ318_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002928786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4492 domain-containing protein"
                     /protein_id="HDV7431097.1"
                     /translation="MYLKHLYFSISQIFNFYKEGFKNLTLGKTLWKIIFIKLFVMFVI
                     LKLFVFDVNFNSIFKSDKEKSTFVLKNLTLEGK"
     gene            7352..8914
                     /locus_tag="RJ318_001233"
     CDS             7352..8914
                     /locus_tag="RJ318_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDV7431098.1"
                     /translation="MNELSSVDWSRAQFALTALYHFLFVPLTLGLSFMIAIMETIYVK
                     TKNERWKKITKFWLSLFAINFAIGVATGIIMEFEFGTNWANYSWFVGDIFGAPLAVEG
                     IMAFFLEATFFAVMFFGWDKVSKGFHLLSTWCVAIGSNLSAFWILVANGWMQYPVGMS
                     FNPDTARNEMQSFFEVALSPVAISKFLHTIGSGYVISALFVMGISAWFMLKGRHIIEA
                     KKSLVVGASFGLVCSIFLFFSGDESAYRVTQTQPMKLAAMEGVYQGEHRAGLVPFGIL
                     NPKKTIDNNESVFLFDITIPYALSILGNRDPNSFVPGIEDLIYGNESKGIEPMQNRID
                     RGKIAIQALKDYKLAKENNDTIAMANHKSILETHFKDFGYGYLEKPSDTIPPVALTFY
                     SFHIMVALGSFFFLLFIVTLYLTMANDIEKFRKVLWVCLLSIPLGYIAAEAGWIVAEV
                     GRQPWAIQDLLPVHIAATQLGKVNVQISFWIFAVLFTALLIAEVKIMLTQIKKGFDAH
                     AGHTPLMGKGEK"
     gene            8914..10038
                     /gene="cydB"
                     /locus_tag="RJ318_001234"
     CDS             8914..10038
                     /gene="cydB"
                     /locus_tag="RJ318_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDV7431099.1"
                     /translation="MFFGLELEGLQIYWWLILSLLGGLLVFMFFVQGGQTLIDELSKD
                     ELEKTMLVNSLGRKWELGFTTLVLFGGAAFAAFPLFYSTSFGGAYWAWLCILFCFILQ
                     AVAYEYRKKENNVYGSKTYEIFFKINGYLGVFLIGVAVSSFFSGSEFILNEHNFVSWQ
                     NPLHGLELLLNPFNYLLGLALVFLARLLGAAYFMNNINDENIKIRAMKKLMINSILFL
                     PFFLGFLAWIFLKDGFSVDTNGVVSMSANLYLYNFLNQMIFAVLLVIGVILVLLGMVQ
                     GTKGCSKAIFTLGLGTVLTVFALLSSIGLGQSAFYPSLSDLQSSLTLKNASSSYYTLS
                     VMAYVSLLVPFVLAYIIYVWNAMDKVKITREEIANDDHAY"
     gene            complement(10232..10927)
                     /locus_tag="RJ318_001235"
     CDS             complement(10232..10927)
                     /locus_tag="RJ318_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HDV7431100.1"
                     /translation="MKTIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVN
                     FEEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPIL
                     HIAKSSAKALKQENIQKIGLLGTKYTMTQDFYKKMLIEENISVITPSDEDIKIVNDII
                     FNELCKGEIKQDSKEKYLNIIKKLQEKGAKGVLLACTEIGLLISKNDTNIKIFDTSLI
                     HALDAANEALKDL"
BASE COUNT         3510 a         1781 c         1761 g         3917 t
ORIGIN      
        1 cttactgatt ctagtataga atcagtaaat aataatatgt gcaatttgtg gcccatgaac
       61 accaaaaaca gtgataagtt ctatatctgc tgttcttgaa ggccctgcta taaataagat
      121 attagtaggt aaaatttcat tttctttttt tactaaattt aaagcttcgc taagactttt
      181 aacaacattt tcttttttaa gcaatactat gcaaagttta ggtgcaaggc ttagcattct
      241 aggttgggtt ttacttgaag gtataagtgc aactccgtga gagcttaccc ctgctcttgc
      301 gtgaatgatg gaaaaatcac tatgaaaaac ttcagatctt aaattttcga tttctttatc
      361 aaagcaaatc tttttttctg ctttgatttg ttctaaattt aaatttaaat ccgctccata
      421 aatcatactt ttaaagctat attttgcgac aatttcattg attttttctt ctaaggtatc
      481 ttttgtagca ttttcaacga tgtatttgtt atcgctcatt ttttgcttca tttctgtaag
      541 catatcttgg gttgtctgga tatgttctac aggatctata ctttcaatgc gtgtgaaagt
      601 tgtttctttg taagcttttt taagatgttc taaaatattt gctttgcttt tgcttgaaat
      661 ttcatcgatt ttactcatag cttactcctt ctagtttttg cacttcttta taaagatcca
      721 ttttaatttg aggtaattct ttaaaagcgt accatttttt aatcacaggc aaaatgcttg
      781 cgaaattttg taccgtccag ttgaaataat gtgcttttga aagtgaaaaa cgccatttat
      841 cgccattggt tgcgatattt ttaaattgtt taaaagcaaa ggcttctagg gcattgtgat
      901 gaacattatt tgctcctaaa ggtggatttt taccttgtcc tattttatca catcttaatt
      961 tgcgaataag atcagccaaa ggaatttgga ctggacaaac ttcagaacaa cgcccacaaa
     1021 gtgaacagaa attcaaaata tctcctgtat gatctatacc aaaaatatta ggactgatta
     1081 cttctcctat aggtcctgga taagtggttt gataagcatg tccgccgatt tgatcataaa
     1141 cagggcaaaa attcatacaa gccccgcatc gaatacaacg caaagcctca taataatcct
     1201 catgagctaa cattttagag cgattgtgat caaataaaat cacatgtact tctttaggac
     1261 catctaaatc tccatttttt ctaggacctg taatgatatt gttataagtt ggtataaatt
     1321 gtcctgtggc tgaaggagta agtaaagaaa ccatagtagc cgcatcttca aagctttcca
     1381 tgattttttc tataccacaa agtgcgatat gaatatcagg tgctgtagtg cacattctac
     1441 catttccttc attttctata agccaaaaag ctccttctct tgacatggca aaattgaccc
     1501 cactaagtcc aagttttaag ccttcaaaat cttttcttaa atgttctcta gccaccgcat
     1561 ttaaactttc gggttcatcg ttttctaaat ttgctcctaa tttttctttg aaaatttctc
     1621 cgatttcatg gcggtttcta tgtatggcag gtacaactat gtgtaaaggg ggttcttcat
     1681 taagctgtaa aataagctct ccaagatcgg tttctatagc ttttaaacct tttttttcta
     1741 ggtagtgatt taggcctatt tcttcacttg ccatagactt gccttttaaa agcttggtga
     1801 tatttttttc tttcatgatt tcatagacga tttcacaggc atcttcatca ctacttgccc
     1861 aatgcacctt aatgccattt tttgtagcat ttttttcaaa ttctaaaagt ctttcttcta
     1921 agctcattaa ggcattattt ttagcttgct tagctttagc tcttaagccc tgccagtctt
     1981 taaatctagc atcaataaca ttgagtctat ttttttgcaa agtatgcatg gcagtcatta
     2041 aattttcttg catttgtttg tcattgagtt taatttgaac gatttgttcg tgaggaattt
     2101 tttgactcat agtctccctc cttctaagcg tttaagtaaa aagtcatata aatgtatgcc
     2161 ttttatatcc aaacccattc ttttcattgt gccatctata tttaaaagac aacctccatc
     2221 accactgatg agatattttg caccgctatt ttgtatatct ttgattttgc ttcttaccat
     2281 agcatttgaa atttcaggct cttttactga aaaggttcct ccaaaaccac agcattcttc
     2341 ttcgtattga agttctacta attctacgtt ttttagtttt ttgataagat ttttactcgc
     2401 ttgtatgctt ttttgcactc ttaaagcatg gcaattagaa tgccaagtta cttttatagg
     2461 tacaccttta tcttcataat ctacttttaa aacttcatca aggtattgtg aaagttctat
     2521 cactctagag ctaaaagttt ttattttgga aaattcaggt ctgtttttaa aaagctcttt
     2581 atagtcatga ctcatcatac ccgcacaaga accactgggt acaacgatgg gataatcttt
     2641 atcaaataaa tctacattat ataaagcgat ctcacgactt tcatcgaaat aacctgagtt
     2701 aaaagaaggt tgggcgcaac aggtttgatt ttttttgaaa atcacttcaa taccctcacg
     2761 ccttaaaagt tttatcgcat ttaaaacgct ttgttgcata gcagtacttc ctaagcatgt
     2821 ggcgtaaaaa tacacttttt tcatcatttt tctcctttta ggataattta ggataaatgt
     2881 tctaatcctg taaaaataaa agcaaagtaa aatttctaac aaatattcta aaaacgaata
     2941 tttgttgaaa taaaacttaa atttttttaa ttatttcact ataacttcag ggatgattcc
     3001 ttgtaagaaa aaagctataa tgcaagtcca aattcctatt aaaataataa aagctacaga
     3061 atattttaat gtgaatttga aaagatcaga ttcttttccc acaagtccaa ccgctgcaca
     3121 agctatagca atgctttgtg gactgatcat cttcccaaca accccaccta ctgaattagc
     3181 tgctaaaaat aaagcttcgc taatacctag tttttgagcg cttacttgtt gcaaggttcc
     3241 aaaaagtaaa ttagcacttg tatcagagcc tgttaaaaat acccctatcc agccaatgat
     3301 tggtgaaaag aaagaaaaag catcacctgt gtgtgcaaaa gcaagtccta aagtagtgct
     3361 cataccacta tttttagaga taaaagcaaa ggccacaacc aaacctatgg tgatacaagg
     3421 tatagccatt tcttttaagg taacccaaaa gcattctgca gcatcttcgg ctttgatttt
     3481 taaaatagct atagttaaaa aagcggcaag taaaatcgct gttcctgctt gagctacggt
     3541 ttttccattg attaaatcta cacccaaggc caaagataaa ggcttagctt ctcctatgcc
     3601 tgtgatagaa gggcttaaaa ttccagttgt gatattgcta aattgtaaag taatacttgt
     3661 atagcttaaa attccgtcct tatcaaagag agctttaaac caaggttgtg tccaaatgat
     3721 aatacaaaca atgagtaaaa taaaaggtga ccaagctttt aaaatttgat taaaacttaa
     3781 ggtgttatct tgagtgaaat tgctttcatt gtcaaatcta aaaatatttt ttggtttcca
     3841 aaatttcaaa aatacagtcg taactgctaa agaaaccaca gctgaaataa tatcaggtaa
     3901 ttccgctcct aggtgatttg agcttaaaaa ttgagtagtt gtaaaactta gcgccgcaac
     3961 taaaatagct ggaaaagttt ctttaatacc tttaaatcca tccattaaaa aaactatgaa
     4021 aaaaggtata gtaaggctta aaggaactag cattctacct accatggcag aaactgaatg
     4081 ctgttctatg ccgacaagat ttgccatagc aataatagga attcccaccg caccaaaagc
     4141 aacaggagcg gtatttgcga taagacaaag ccctgcagct tgtaaaggac gcaagccaag
     4201 tcctactaaa agtgcagcgg ttatagccac agggccacca aaacctatag caccctctaa
     4261 aaatgaacca aaacaaaaac ctattaaaat cacttgaatt ctatgatctg gagtaatgct
     4321 catcacgctt tttttaatga tttcaaaaga acctgacttg atagaaagtt tgtaaagaaa
     4381 gattgccgcg atgataatcc aagctatagg ccacatacca tttgtaaagc cttgaataaa
     4441 acttgcaccc actaaattcc aaggcatttt ataggcaaat aaagctacta aagtagcaag
     4501 tataacagtt aaaaaacctg cttgatagcc tttaagtttt aaaacaacca aacaaactaa
     4561 aaaacatagt ataggtaaaa atgccactaa agcacttagc caaatatttg aaaaagggtc
     4621 ataaatttgt tgccatgtta aaatttgttc caatttttcc tccttgataa ttattatgta
     4681 taaatttatt gtaacaaaaa attacattaa aataaaaaaa ttatagagca aggtaaatta
     4741 cattgtatta ttattaatta ttttgtgtat tttagtaata tcataaatat taaataaata
     4801 taaaaataga acaagataaa aatcttattc taaaggggta gcagctgtta aaggtggggt
     4861 tataatcatt agttcattta cttcagcaaa aaaaatagga tctagggtgc aaggggctat
     4921 tccaaagcgt ttttgtatag gaatatttgg attaaaaaaa gttactatac attcatcaga
     4981 ttccaaaact aaagaacgaa tttgcacagc tgaagttgtt gttggcatta tagaaaatac
     5041 agtttctaat ttaccatctt ttagatcatc ttgacaagat tttgctccaa aggttccatc
     5101 ttctaagatg gctaaacaaa gatcgctttc ttttggattt gtaaattgca cataaccaaa
     5161 aggaagttca tcagctaatt tatctttttg ttttaactca tcgcttaaaa caatttcttt
     5221 aatattccaa ttttgatcaa taggatcttt tgaggtatcc ctaaaggcgc ttaaaaaaat
     5281 tcccgtttct aagcttctta tagaaaccat ttcggtaaaa tctttcaaat ctccagtagg
     5341 agttgcaaag gctaaagtta taaacataaa aaacaaagta ataatttttt tcatattaaa
     5401 tgtcctaaaa ttttctaaaa tttactggaa aatgatctga aactatatga gatcttaaac
     5461 ttgcaagcat taaaatcgca gctaaaagcg gtggagtata ggtttgttgt ctatttgaat
     5521 ttcctgtaat tgcataatca agagtccctc cgcttgcttg agttgcgcta gttggaaaaa
     5581 ccactctaat tctatttgct aattctctat ccactgtact tgttatagta gaaggatcac
     5641 ggttaaaatc ccctgctatc atccagttaa cttgaggcat atttgcaaaa tgtgcatcta
     5701 cagctgtgat aattgctcct acatctgttc ctccattagc taaagcatgg atattgaaaa
     5761 aagcatcatt tccattgcga attcctataa tgggtcttga aactgtagta ggtggaggta
     5821 aaacaatcac ttcttcagct tgcattcttg aaactatagc taaatttaca cgattagctc
     5881 ctacatcaac gcgagaataa taaataaaaa ccctatcagg ccttgaaaga gttcctaaat
     5941 tccactcata ttcatcaata ggtgttccac cttgttgcac atggcgtcct gttggagtgg
     6001 ctgttcttgg taaagttcct gcttcttgta tcattaagat atctaagggg tttgctccac
     6061 ttacaagttg tcttacacta acactccatt tgctttctgt ggctgcggat gagccttgca
     6121 aattccaagt gccaacatta aaattttcta aatttgcaaa agcaaggtta aaagataaaa
     6181 ataaacatat aatttttttc atcgtacctc tccttggcga tataaaggtt ttgcggtaaa
     6241 aggcggagta gttaaaaacc attgttgatc aaaattatct ttttttgcac actctacggt
     6301 aaaaatttta aaaaccttgt gaaaatcacc ataaagattt gtaataggtg cttgtatgca
     6361 ttttccattt cctaaatttt taatttgaac cgctgtattg ctcataggga taagtttcca
     6421 catttgtgcg tgattgcttg catcacaagg ataatggaca attccattac cataagcatt
     6481 aagacaagta ttggttttgg catttttaat cattgcaaaa tcattaggat aaagcaaaag
     6541 ttgccaaact ctagcatcgc caaatccttt gctatcgatt aaagtatagc cccaaatcca
     6601 atttccttgt gctaaagccc aaaccgttaa agctgctccg ctagggccta aaatggttaa
     6661 aaaatcagaa accgcagggc gattttcaaa aattaaaaca tcattaaaag cttcgtcttt
     6721 aaagcgagga ttgatcccat ttgctgcatt attgttggca ctattgcttg ttctagttaa
     6781 aggtggggta ataggagtaa taggtactaa atcagcaccg ctaattaaac ttggaatttc
     6841 ttgattggta ggaaaagtag gttcaagtcc tagttttaaa ggatcagtat cttcaaattc
     6901 tccaaatgaa cgccccaaag gatttacatt ttcaaattta gaagaacatg cataaagaaa
     6961 aaaagtcata aaacaacata aaataaaaac tataattttt tgcattaaaa accttgatat
     7021 gtatttaaat ttttaagaaa ataataacat aaatttcatt ataattttcc gctttttaaa
     7081 aatgttttat tttgttgttt ttaaaggtag aatttatatg tatcttaaac acttatattt
     7141 tagcatctct caaattttta atttttacaa agaaggtttt aaaaatttaa ctcttggaaa
     7201 gaccctttgg aaaattattt ttatcaaact ttttgttatg tttgtgattt taaaactttt
     7261 tgtttttgat gtaaatttta attctatttt taaaagcgac aaagaaaaaa gcacttttgt
     7321 actcaaaaat cttacactcg aaggaaaata aatgaacgaa cttagtagcg ttgattggtc
     7381 aagagcgcag tttgctttaa ctgcacttta tcattttttg tttgtgcctt taaccttagg
     7441 cttgtctttt atgatcgcta tcatggaaac catctatgta aaaactaaaa atgaaagatg
     7501 gaaaaaaatc accaaatttt ggctttcatt atttgctata aattttgcta tcggtgtagc
     7561 tacaggcatt ataatggaat ttgaatttgg aacaaactgg gcaaattata gctggtttgt
     7621 gggtgatatt tttggtgcac ctttggcggt tgaaggtatt atggcatttt ttttagaggc
     7681 tacttttttt gcagttatgt tttttggctg ggataaagta agcaagggtt ttcacttact
     7741 ttcaacttgg tgtgtggcta taggaagtaa tctttctgct ttttggattt tagtggcaaa
     7801 tggttggatg caatatcctg taggaatgag ctttaaccct gacacagcaa gaaatgaaat
     7861 gcaaagcttt tttgaagtag cactttctcc tgtagctatt tcaaaatttt tacataccat
     7921 aggcagtggt tatgtaattt cagctttatt tgtaatggga atttcagctt ggtttatgtt
     7981 aaaaggacgc catattatcg aggctaaaaa aagcttagtt gtaggagcta gttttggttt
     8041 ggtttgttca atctttttgt ttttcagcgg agatgaaagc gcttaccgtg taactcaaac
     8101 tcaacctatg aaacttgcag ctatggaagg ggtttatcaa ggtgaacatc gtgcaggact
     8161 tgtacctttt ggaattttaa atcctaaaaa aaccatagat aataacgaaa gtgtgttttt
     8221 atttgacatt actatacctt acgctctttc tatattagga aaccgtgatc caaattcttt
     8281 tgttccagga attgaagatt tgatctatgg aaatgaaagc aaaggtatag aacctatgca
     8341 aaatcgtatc gatagaggaa aaatcgctat acaagctcta aaagactata aacttgctaa
     8401 agaaaacaat gatacaatag ctatggcaaa tcacaaatcc attttagaaa ctcattttaa
     8461 agattttggt tatggatatt tagaaaaacc aagcgatact attccacctg tggctttaac
     8521 tttttatagc tttcatatca tggttgcttt aggaagtttt ttctttttac ttttcatcgt
     8581 tacgctttat cttaccatgg caaatgatat tgagaaattt agaaaagtac tttgggtgtg
     8641 tttgttatcc attccattgg gttatattgc cgctgaagca ggttggattg ttgctgaagt
     8701 aggcagacaa ccttgggcaa ttcaagactt gcttcctgta catatcgcag caacacaact
     8761 tggaaaagtc aatgttcaaa tttcattttg gatttttgca gtacttttta cagcattatt
     8821 gattgcagaa gttaaaatca tgcttactca gattaaaaaa ggttttgacg cacatgcagg
     8881 acatactcca cttatgggca aaggagaaaa ataatgtttt ttggtttaga acttgaaggt
     8941 ttgcaaattt attggtggtt gattttaagt ttacttggtg gacttttagt ttttatgttt
     9001 tttgttcaag gtggacagac tttaatcgat gagcttagca aggatgagct tgaaaaaact
     9061 atgctagtta attctttagg gcgtaaatgg gagcttggtt ttacaactct cgtacttttt
     9121 ggcggagcag cttttgcagc ttttccactt ttttatagta caagttttgg cggagcttat
     9181 tgggcttggc tttgtatttt attttgtttt attttacagg ctgtggctta tgaatatcgc
     9241 aaaaaagaaa ataatgttta tggctctaaa acctatgaaa ttttttttaa aattaatggt
     9301 tatttaggtg tgtttttaat cggagttgca gtaagtagtt tttttagcgg ttctgaattt
     9361 atcttaaatg agcataattt tgtttcttgg caaaatcctt tgcacggctt agaactttta
     9421 cttaatcctt ttaattatct cttaggctta gctttagtat ttttagcaag gcttttaggc
     9481 gcagcgtatt ttatgaacaa tatcaatgat gagaatatca aaataagagc tatgaaaaaa
     9541 ctcatgatca atagtatttt atttttacct tttttcttag gttttttagc gtggattttc
     9601 ttaaaagatg gttttagtgt agatacaaat ggagttgtaa gcatgagtgc gaatttatat
     9661 ttatataatt tcttaaatca aatgattttt gctgttttgc ttgttattgg tgtgatttta
     9721 gtgcttttag gtatggttca aggaacaaaa ggttgctcta aagctatttt taccctagga
     9781 cttggaacgg ttttaacagt ttttgcttta ttatcaagca ttggtttagg tcaaagtgct
     9841 ttttacccat ctttaagtga tttacaaagt tctttaactt taaaaaatgc aagttcaagc
     9901 tattatactc taagcgtcat ggcttatgta tctttacttg taccttttgt tttagcttat
     9961 attatctatg tttggaatgc aatggataaa gtaaaaatca cacgcgaaga aatcgcaaac
    10021 gatgatcacg catattaagg agaaaaaatg ttacatgctt tgtttttatt ggcttggcct
    10081 ttagtaattt atctgagcta taaatttata atgctaaata tcaatcaatt agaaaaagat
    10141 agcaaactat aaagcaagat aagatttaaa ccgatataag tataaatctt ttcaaaatat
    10201 tgcaatttgc ccatttttgg gtatctttta atcataaatc ttttaaagct tcattagcag
    10261 catcaagggc gtgaataagg cttgtgtcaa aaattttgat atttgtatca tttttggata
    10321 ttaataaacc aatttcagtg caagctaaaa gcactccttt tgcccctttt tcttgtagtt
    10381 tttttataat atttaaatat ttttctttag aatcttgctt gatttcacct ttgcaaagct
    10441 cattaaaaat aatatcatta acgattttta tatcttcatc actaggagta ataacgctaa
    10501 tattttcttc aatcagcatt tttttataaa aatcctgcgt cattgtgtat ttagtaccca
    10561 ataaaccaat tttttgtatg ttttcttgtt ttaaagcctt agcagaactt tttgcaatat
    10621 gtaaaatagg gatatttata ttttgttgaa tttcatcaaa aaccttatgc atagtattag
    10681 ttgcaattat tataaaatta gcccctgcaa gttctaattt tttagcacat tgagtcaaaa
    10741 tttgtgcagc ttcttgccat ttatcttggc tttgtaaatt ttctatttct tcaaaattaa
    10801 cactgtaaag taaaattttt gcagaattta aagattttaa tttatcattt atagcttgat
    10861 ttattgtttt ataataagta atagtgcttt caaaactcat tccgcctata ataccaatgg
    10921 ttttcatttt tctccttaag aattaatttt tgagtcgttt tattacaat
//
LOCUS       DAPIYB010000058        10901 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.059, whole genome shotgun sequence.
ACCESSION   DAPIYB010000058 DAPIYB010000000
VERSION     DAPIYB010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10901)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10901)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10901
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.059"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..1068
                     /locus_tag="RJ318_001236"
     CDS             <1..1068
                     /locus_tag="RJ318_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5644 domain-containing protein"
                     /protein_id="HDV7431101.1"
                     /translation="KLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQVQNDD
                     IYFDFDKDEDTYIVVNKQIIPLFTPLEKIAKEFDFNLCIEPLSTKRAIKDLIIDKNDF
                     LDKYKYLEKFGDEEDKKLYAKYDYLYYATEILDYLPEYMGDGVFYLASKMIEKYPEKK
                     IEILKTLADKEKGIFYHLESKNEILETTIKNLQNEILNLGLFDKNILHFDLPKTNAFD
                     NEIKELKEIKHNFKDFNIAFYGFNACDTLKSKLKAKFISYENSIKNNGFSLLNLNPTL
                     SYKIAADIVLDAYDSGADFMVVKEEKDFYLFDTCAKKLMQTSGREFEDFYILSRFEFL
                     ALIEGIQAPSLKNHTLKVSLI"
     gene            1065..1448
                     /locus_tag="RJ318_001237"
     CDS             1065..1448
                     /locus_tag="RJ318_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDV7431102.1"
                     /translation="MKISLECKDLIIEKTLELFLKDHLVMKKNCDFIISDEKIYTAKP
                     LFIISKNSPFLSIPFSKEALFESLNEFDNALKAAALQLALEQKRLLEEKIDAIALEFK
                     KDYENKIDLAIKDLKNKLVKALNDE"
     gene            1441..2124
                     /locus_tag="RJ318_001238"
     CDS             1441..2124
                     /locus_tag="RJ318_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HDV7431103.1"
                     /translation="MNDEFISVKDFFNHNEKRKKFLQKQEIKPLKEKTKKTKETKLYT
                     NIESGKYKGKKLLLPSLTTTRSTKSIVKSCVFNVIREDLRSKIFIEAFGGSALMAAEA
                     LSNHTLKAYAIELDAKAYKIALENAKNIDPNLEVIHANTFEILPKFIENSKNEIILYL
                     DPPFDIREGFSDIYEKIYHFLENLDLKTLNLIIFEHHSTIKTPEKIQNFQKIKEKKFG
                     STSLSFYTS"
     gene            2183..3229
                     /locus_tag="RJ318_001239"
     CDS             2183..3229
                     /locus_tag="RJ318_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HDV7431104.1"
                     /translation="MRVLTIFLLFMTSIFAVQIKDVANTVGVRDNQLIGYGLVVGLNG
                     SGDGTSSKFTLQSISNLLQGMNIKVDPNDIKSKNTAAVMVTAKLPAFAKSGDKLDITV
                     SSMGDAKSLQGGTLLLTALRGIDGEIYAIAQGSISTGGLTPRPGGAGSHSTAATVMGG
                     ANVEREIPQNFSQNNDLTLSLKVADFKTANDIERVLNTVFGEEVAKAIDSRTVKLKKP
                     EDLSNVDFMARVLEQDIAYKPQSKVIIDERTGTVIAGVDVEVEPVLITHKDITIKIDP
                     NNNAVANQNEIDMKDGGFVDPSSNTLRINNAKSTVANIARMLNKLGATPNDIIAIMEN
                     LKRAGAINADLEII"
     gene            3229..3570
                     /locus_tag="RJ318_001240"
     CDS             3229..3570
                     /locus_tag="RJ318_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431105.1"
                     /translation="MKVDNFLNTYSMNSALLDRAAKARSLESSIKINDNDIVTKSKED
                     EALKEQTDAFEAFFLKQVLDVSLKSQNSLFGKDASDEIYSSMYNDTMSKALSGGMGFS
                     KLLYDFLKERG"
     gene            3633..3830
                     /gene="flgM"
                     /locus_tag="RJ318_001241"
     CDS             3633..3830
                     /gene="flgM"
                     /locus_tag="RJ318_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HDV7431106.1"
                     /translation="MINPIQQSYVANTTLNTNRIDKETKTNDTQKTENDKASKIAEQI
                     KNGTYKIDTKATAAAIADSLI"
     gene            3873..4307
                     /locus_tag="RJ318_001242"
     CDS             3873..4307
                     /locus_tag="RJ318_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlgN"
                     /protein_id="HDV7431107.1"
                     /translation="MLKQRLDEVNAILAKLIALTEEDIENIKVAKHESVTPSVEEKNK
                     LIAEFITAKKQLDVALVELNNSSTKGLSELLDDEDKQKLDLLKKNLQNLHSKNKEYAK
                     FVLIVKDFLDGLVNKMFDINDGTNNAYGDKKTNPESIFKINV"
     gene            4317..6143
                     /gene="flgK"
                     /locus_tag="RJ318_001243"
     CDS             4317..6143
                     /gene="flgK"
                     /locus_tag="RJ318_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HDV7431108.1"
                     /translation="MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQT
                     TNGYITTGGVQVGTGTAVESIVRLHDEYSYYKLKGASTQLEYTKYMASTLQEIAQRFP
                     DLQNTGILQDLENYNKAWNDFASNPNENATKIALVKASQTLTESVNNTFATLDKIQKK
                     VNDDIKNTVDEINRIGEEIATINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAV
                     ASKNEINQDNRLDTTITDPGHQYNLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYET
                     PDEKVRDLTAKISGGQLGAQLDLRGRNYSKSEGKYEDGIIQGYMDSLDTFAKTMINET
                     NNLYASSAKSSVTSDYLSGLKGDIPLVNYDRTIQPGSFDIVIYDDKGDKKLTKTITID
                     VNTTMNDIMRQINANTDDNNNKNSNDDVDDHINASFSYDAKTGDGLFQINAKSGFKVA
                     IEDKGTNFAGAFSIGGFFSGTDASNMKVKDSILNDPSTVRASLSGVDSGNDMANKIIQ
                     LQYEKVNFYNEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYNSVYSEYQS
                     KSGVNTNEELAALIQYQSSYGAAAKIVSTVDQMLDTLLGLKS"
     gene            6160..6924
                     /locus_tag="RJ318_001244"
     CDS             6160..6924
                     /locus_tag="RJ318_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HDV7431109.1"
                     /translation="MKNFIHLKAKLDFLANQKNTNHSLFETPDPLQIAKIHNDEFIAL
                     ICALFAYGNAKNIVNFLKKLDFSLLNLQEKQIKKELKNLKYRFQNEKDIQEIFITLSR
                     LKNEISLYELFYQAYQERENTTDAILAFMQKIKTLNSYSSYGYNFFFGKIWQNTPTSP
                     LKRYNMYLRWMVRKDELDLGLFTKIHTKDLLIPLDTHAHKISLTLGLLKRKIYDYKSV
                     LELTQNLKKLDANDPIKYDFALYRLGQSKEIDKFKE"
     gene            6928..7698
                     /locus_tag="RJ318_001245"
     CDS             6928..7698
                     /locus_tag="RJ318_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004314270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDV7431110.1"
                     /translation="MGFEHLNTIYYFILFFVALFAGFIDSIVGGGGLITLPALIACGI
                     PAHLSLATNKLQSVFGSFTATLTYFKSTTLPHLAWGVFFTALGAAIGSYSVLFVKDEQ
                     LKLIILIFLTLTFLYTALRPNLGKHKSEPKIKNIKIFHLICGLTLGFYDGFLGPGTGS
                     FWIFACVMLLGFNMRKASINTKILNFTSNIIALAIFLWQYELLWAVGLLMGVGQVLGA
                     YLGSKLVLKTNGKFIKTLFLIVVGATIIKVAWDYFSQN"
     gene            complement(7685..8866)
                     /locus_tag="RJ318_001246"
     CDS             complement(7685..8866)
                     /locus_tag="RJ318_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002880441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDV7431111.1"
                     /translation="MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEI
                     QKSNFQRLKDENFILFFKELALLCEVGLSVQEAIKELYLMHSCKIMKKILDNLILAQN
                     LNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
                     LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDDYGIFCIFLFV
                     IFIVMLILAYKNFHSFAFSCDFLFLKVPLISRLIIYNQNYYFFMVFSLLLKNGISISK
                     AFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSLVFSMLSVAMKSGRL
                     EVLSEEIAKYYQQKSENLMDRFLIFLEPMMTLFVALLVLFLALGIFLPMWELSSGVNF
                     D"
     gene            complement(8863..10422)
                     /locus_tag="RJ318_001247"
     CDS             complement(8863..10422)
                     /locus_tag="RJ318_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HDV7431112.1"
                     /translation="MESRMDKIFQAYIDNEISLDEICTKFNITSWDFFNKLANFCNLH
                     FVDLDEDNDFIYEGIPFSLLLKFKFLLIKNNDGFMIIRSKPCSLELLEQVKTFMICEK
                     IDTAIADELKIAKILNQIRIQEEIKRLSIKLRLEWQENHKRDDQSCISQIFDFLLHEI
                     LSFHASDIHIEARNNDALIRFRVDGILREFAIFEKDIYEALVFHVKFLACLNLAESRK
                     TQDGSFELDFENERYDFRVSCLPLIYGESVVIRILKHDKEILDLYKLNLGNKNLEILK
                     KILHRPNGMILLTGPTGSGKSTTLYACLNELKSIEKKIISAEDPIEYKIPLVQQILLN
                     SKVGVEFNSVLRAILRQDPDIIMIGEIRDEESLDIALKASLTGHLLLSTLHTNDALST
                     IDRLLDMQAKSYLIASALSLVIAQRLVRKLCPWCKQKSKKHYIEFEGEFFEPKGCERC
                     HHSGFFGRELIAECLEINEDLACAIRENQDKTILMELAKKYGFQTMFEQGLKKAKEGL
                     TSIDELLRVVR"
     gene            complement(10412..10879)
                     /locus_tag="RJ318_001248"
     CDS             complement(10412..10879)
                     /locus_tag="RJ318_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009882975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transformation system protein"
                     /protein_id="HDV7431113.1"
                     /translation="MQKYNKQKNIYLQAIEHKKHLEQKILQAQILQEKNKISREKLYK
                     ELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKT
                     IFWALKANELDKQKQDSWLIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK"
BASE COUNT         4135 a         1689 c         1574 g         3503 t
ORIGIN      
        1 aaattagaat taagaatttt tagatttgat aaaactaagg attatgaggc ttattataaa
       61 ccttatattt atgataatta tgaaaatttt gcaagttttt atgatctgct tttgcaagtt
      121 caaaatgatg atatttattt tgattttgat aaagatgaag atacttacat agttgtaaat
      181 aagcaaatca taccactttt tacaccttta gaaaaaatag caaaagaatt tgattttaat
      241 ctttgtatcg agcctttaag tacaaaaaga gctattaaag atcttatcat cgataaaaat
      301 gattttttag acaaatacaa atatcttgaa aaatttggcg atgaagagga taaaaagctt
      361 tatgcaaaat atgattattt atattatgca actgaaattt tagactatct tcctgaatat
      421 atgggcgatg gagtgtttta tttggcttca aaaatgatag aaaaatatcc tgaaaaaaag
      481 atagaaattt taaaaactct agcagataaa gaaaagggta ttttttatca tcttgaaagc
      541 aaaaatgaaa ttttagaaac aacgatcaaa aacctacaaa atgaaatttt aaatttaggg
      601 ctttttgata aaaatatttt acactttgat ttacctaaaa ccaatgcttt tgataatgag
      661 atcaaagaac ttaaagaaat taaacataat tttaaagatt tcaatatagc tttttatggt
      721 tttaatgctt gcgatacttt aaaatccaaa cttaaggcta aatttatttc ctatgaaaac
      781 agtataaaaa ataatggctt tagcttgctt aatctaaatc ctacgctaag ctataaaata
      841 gccgcagata ttgttttgga cgcttatgat agcggggctg attttatggt agtaaaagaa
      901 gaaaaagatt tttatctttt tgatacttgt gctaaaaaac ttatgcaaac aagtggaagg
      961 gaatttgaag acttttatat tttgagccgt tttgagtttt tagcccttat cgaaggcata
     1021 caagctccat cattaaaaaa tcacacttta aaggttagtt tgatatgaaa atctctttag
     1081 aatgcaaaga tctcatcata gaaaaaactt tagaactttt tttaaaagat catttggtaa
     1141 tgaaaaaaaa ttgtgatttc atcattagcg atgaaaaaat ttataccgca aaacccttat
     1201 ttatcatctc taaaaactct ccatttttaa gcataccatt tagcaaagaa gccttgtttg
     1261 agtctttaaa tgaatttgac aatgccttaa aagcagcagc tttgcaactt gcacttgaac
     1321 aaaaaagact gcttgaagaa aaaattgacg ctattgcttt ggaatttaaa aaagattatg
     1381 aaaataaaat cgatcttgcc ataaaagatc ttaaaaacaa actcgtaaaa gcacttaatg
     1441 atgaatgatg aatttataag cgttaaagac ttttttaatc acaatgaaaa aagaaaaaaa
     1501 tttcttcaaa aacaagaaat taaacctctt aaagaaaaaa caaaaaaaac taaagaaaca
     1561 aagctttata caaatataga aagtggtaaa tacaaaggga aaaaactact tttacctagt
     1621 cttacaacaa caagaagtac taaaagcata gtcaaaagtt gtgtttttaa tgtaataaga
     1681 gaagatttaa gaagtaaaat tttcattgaa gcctttggag gaagtgcttt aatggcggct
     1741 gaagcactaa gtaatcatac tttaaaagct tatgctatag aacttgatgc aaaagcttat
     1801 aaaattgctt tagaaaatgc taaaaatata gatccaaatt tagaagttat ccacgcaaat
     1861 acttttgaaa ttttacccaa attcatagaa aattcaaaaa atgaaatcat cttatatctt
     1921 gacccacctt ttgatatcag agaaggtttt agtgatattt atgaaaaaat ttatcatttt
     1981 ttagaaaatt tagatttaaa gactttaaat ttaatcattt ttgaacacca ctcaaccata
     2041 aaaactcccg aaaaaatcca aaattttcaa aaaattaaag aaaagaaatt tggatcaact
     2101 agcttaagct tttacacttc ttaacttact tggaacactt cttgcttgat ctatcatcaa
     2161 caatagatta aaggaagaat ccatgagagt tttaacgata tttttactct ttatgacaag
     2221 catttttgca gtgcaaatca aggatgtagc aaacactgta ggtgtaagag ataaccaact
     2281 tataggttat ggacttgttg tagggcttaa tggaagtggc gatggaacaa gctctaaatt
     2341 tacactacaa tccatctcaa accttttgca aggtatgaat atcaaagtag atcctaatga
     2401 tatcaaatca aaaaataccg cagctgttat ggttacagcc aaacttccag cctttgcaaa
     2461 aagcggagat aaacttgata ttaccgtttc atctatgggt gatgcaaaat ctttacaagg
     2521 cggaacactt ttactgactg cacttcgtgg gattgatggt gaaatttatg ctatagcaca
     2581 aggctctatc tcaacaggag gtttaacacc tagaccagga ggagcaggtt ctcactcaac
     2641 tgctgcaacc gtaatgggcg gagctaatgt agaaagagaa attccacaaa attttagcca
     2701 aaacaatgat ctaaccttaa gcttaaaagt agcagatttt aaaaccgcaa atgatataga
     2761 aagagtttta aataccgttt ttggcgaaga agtggctaaa gccatcgact ctcgcacagt
     2821 aaaactcaaa aaacctgaag atctttcaaa tgttgatttt atggcaagag ttttagaaca
     2881 agatatagct tataaaccac aaagcaaagt tatcatcgat gaaagaacag gaacagtgat
     2941 tgctggagtt gatgtagagg tagaacctgt tttaatcact cataaagata tcactataaa
     3001 aatagatcca aacaataacg cagtagctaa tcaaaatgaa atcgatatga aagatggtgg
     3061 ttttgtagat ccaagttcaa ataccttaag aatcaacaat gcaaaaagca cagttgcaaa
     3121 tatagctaga atgcttaaca aacttggagc aaccccaaat gacattatcg ctattatgga
     3181 aaatttaaag cgcgcaggtg caattaacgc ggatttggag atcatctaat gaaagtggat
     3241 aattttttaa atacttatag tatgaatagc gctttacttg atcgtgcagc caaagcaaga
     3301 agtttagaat caagcatcaa aataaatgac aatgatatag ttacaaagag caaagaagat
     3361 gaagccttaa aagaacaaac ggatgctttt gaggcatttt ttttaaagca agttttagat
     3421 gtatctttaa aaagtcaaaa ttcactcttt ggaaaagatg ccagcgatga aatatactct
     3481 tccatgtata atgataccat gagtaaagct ttaagtggag gtatgggttt ttcaaaatta
     3541 ttatacgatt ttttaaaaga aaggggttaa gttttttaaa tttgggtcga tatggtttgt
     3601 agaggattat aactaagatc aaggaggcag aaatgatcaa tcctatacaa caaagttatg
     3661 tggcaaatac cacattaaat acaaatagaa tagataaaga aactaaaaca aacgatactc
     3721 aaaaaacgga aaatgataaa gcgagtaaaa tcgcagagca gattaaaaac ggtacttata
     3781 aaatcgatac aaaagctacg gctgctgcga ttgctgactc tttaatctaa aactttcatt
     3841 ctcctttttt ttgagagaga aaaggagaaa atatgcttaa acaaagactt gatgaagtaa
     3901 atgctatctt agcaaaactt attgctttaa ccgaagaaga tatagaaaat atcaaagtgg
     3961 ctaaacatga gagtgtaacg ccaagtgtag aagaaaaaaa caaacttatc gcggaattta
     4021 ttacagctaa aaaacaactt gatgttgcct tggttgagct aaataatagc tctacaaaag
     4081 ggcttagtga actcttagat gatgaagata aacaaaaact agatctactt aaaaaaaatc
     4141 ttcaaaacct tcatagtaaa aacaaagagt atgctaaatt tgttcttatt gtcaaagatt
     4201 ttcttgatgg cttagtaaat aaaatgtttg atatcaatga tggaacaaat aatgcttatg
     4261 gagataaaaa gacaaatcca gagtcaattt tcaagatcaa tgtataagga tttataatgg
     4321 gtatttttgg aacattatac acaggtgtta caggcttaaa ggcaagcgaa gttcaaatcg
     4381 caacaactgg aaataatatc tcaaatgcta atgcaacttt ttatacacgc caaagagtgg
     4441 tgcaaactac aaatggatat attacaacag gtggagttca agtaggcaca ggaactgctg
     4501 tagaaagtat agtgcgtttg catgatgagt attcttacta taaattaaaa ggtgcatcta
     4561 ctcaactaga atatactaaa tatatggctt ccactttaca agaaattgcg cagcgttttc
     4621 ccgacttaca aaatactgga attttgcaag atttagaaaa ttataacaaa gcttggaatg
     4681 attttgcatc taaccccaac gaaaatgcca caaaaatagc ccttgtaaaa gcttctcaga
     4741 ccttaacaga aagcgttaat aacacttttg caaccttaga taaaatccaa aaaaaagtaa
     4801 atgatgatat taaaaataca gttgatgaga ttaatagaat tggcgaagaa attgctacta
     4861 taaataaaca aatttatgga caagaagcct taccaacaga acacgcaaat gaacttaggg
     4921 atagaagaga tgaacttgag cttactcttt caaagctagt tagtgcagtt gcaagcaaaa
     4981 atgaaatcaa tcaagacaat cgccttgata caaccatcac tgatccagga catcaataca
     5041 atctaagtat agaaggtttt agtatagtag atggaataaa ttttcatcct ttaaagcttg
     5101 attatgatga taaaaataaa tcttatagca tttattatga aactcctgat gaaaaagttc
     5161 gcgatcttac tgcaaaaatt agcggtggac agcttggtgc tcaacttgac ttacgcggta
     5221 gaaactatag caaaagcgaa ggaaaatatg aagatggaat tatccaaggt tatatggatt
     5281 ctttagatac ttttgctaag accatgatca atgaaactaa caatctttat gcaagttctg
     5341 cgaaaagttc tgttacttct gattatctat ctgggcttaa gggagatatt cctttagtta
     5401 attacgatag aaccatacaa ccaggaagtt ttgatatagt catttatgat gataaaggcg
     5461 ataaaaaact caccaaaacc atcaccatag atgtaaatac aaccatgaat gatatcatgc
     5521 gtcaaatcaa tgctaataca gatgataata acaataaaaa ttcaaacgat gatgttgatg
     5581 atcatatcaa tgcaagtttt agctacgatg caaaaactgg agatggttta tttcaaatca
     5641 atgcaaaatc aggttttaag gtagccattg aagataaggg cacaaatttc gcaggtgcgt
     5701 ttagtatagg tggttttttc agcggaactg atgcaagtaa tatgaaagta aaagattcca
     5761 tcttaaatga tccaagcaca gtaagagcaa gtttaagtgg ggttgatagt ggcaatgaca
     5821 tggcaaataa aatcatccaa cttcaatatg aaaaagttaa tttttataat gaagatggca
     5881 ctatcgataa tcttaccatg gaagaatatt accgcaaact tacaggtaaa atagcctcag
     5941 atggtgaaaa taacaatgtc gtcaattcaa gcaatgaaac tctttataat tctgtttata
     6001 gcgagtacca atctaaaagt ggcgtaaata caaatgaaga attagccgcc cttatacaat
     6061 atcaatcaag ttacggtgca gcagcaaaaa tcgtctcaac cgtagatcaa atgcttgata
     6121 ccttactagg gcttaaatct taagctctag taatatcaaa tgaaaaattt tatccatctt
     6181 aaagctaagc tcgatttttt agccaatcaa aaaaatacca atcattccct ttttgaaact
     6241 ccagatcctt tgcaaattgc taaaattcac aatgatgaat ttattgcctt aatttgtgct
     6301 ttatttgcct atggaaatgc taaaaatata gtaaattttc taaagaaact tgatttttct
     6361 ttattaaacc ttcaagaaaa acaaataaaa aaagaactta aaaatttaaa ataccgcttc
     6421 caaaatgaaa aagatataca agaaattttt atcactcttt caaggctgaa aaatgaaatt
     6481 tcactctacg aactttttta tcaagcctat caagaaagag aaaataccac agatgccatc
     6541 ttagctttta tgcaaaaaat caaaacctta aattcatatt caagttatgg atataatttt
     6601 ttctttggaa aaatttggca aaacacccct acttcacctc ttaaacgcta taatatgtat
     6661 ctaagatgga tggttagaaa agatgaactt gatcttggac tttttaccaa aattcacacc
     6721 aaagatcttt taattccact tgatacacat gcacataaaa tttccttgac tttaggactt
     6781 ctaaagcgta aaatatatga ttataaaagt gttttagaac tcacacaaaa tttaaaaaaa
     6841 ttagatgcaa atgatcccat aaaatatgac tttgcactct atcgtttagg gcaaagtaag
     6901 gaaattgaca aatttaagga gtgaagaatg ggttttgaac acttaaatac gatttattat
     6961 ttcatacttt tttttgtagc tctttttgct ggttttatag attctattgt aggtggagga
     7021 gggcttatta ctctaccagc actcatagcc tgtggaattc ctgcgcattt atccttagca
     7081 acaaacaaac tccaaagcgt ctttggttct tttacggcta ctttaactta ttttaaatcc
     7141 accactctac ctcatcttgc ttggggtgtt tttttcacag ccttaggagc agctatagga
     7201 agttatagtg ttctttttgt aaaagatgag caattaaagc ttattatctt aatcttttta
     7261 actcttacct tcttatatac agccttacgt cccaacttag gcaaacacaa aagcgaacct
     7321 aaaataaaaa atatcaaaat ttttcattta atttgtggct taactttagg attttatgat
     7381 ggatttttag ggcctggaac gggttcattt tggatttttg cttgtgtgat gctactaggt
     7441 tttaatatga gaaaagcgag cattaatact aaaattttaa atttcacaag caacatcatt
     7501 gctcttgcta tatttttatg gcaatacgaa cttttatggg ctgtaggttt gcttatgggt
     7561 gtaggacaag ttttaggagc ttatttaggc tcaaaacttg tattaaaaac taatggaaag
     7621 tttataaaaa ctttattttt aatcgttgta ggagctacta ttattaaagt agcttgggat
     7681 tattttagtc aaaattgacc cctgagctaa gctcccacat aggtaaaaat atacctaaag
     7741 ccaaaaacaa aactaaaagc gctacaaata aagtcatcat aggctctaaa aaaatcaaaa
     7801 atctatccat caaattttcg cttttttgtt gataatattt ggcaatttct tcacttaata
     7861 cttcaagtct tccacttttc atcgcaacac taagcataga aaacaccaaa gaatcaaaaa
     7921 tatcaatctt tttaaaagcc tgacttaact caagaccaga atctataaaa ctaaaaagtt
     7981 ttttatactg aaaaattaaa aatttatttt caagccctat aatagctaaa tcaaaagctt
     8041 tagatattga aattccattt tttaaaagca aagaaaaaac cataaaaaaa taataatttt
     8101 gattataaat aatcaaacga gaaatcaaag gtacttttaa aaataaaaaa tcgcaagaaa
     8161 aagcaaaaga atgaaaattt ttataagcta aaataagcat aacaataaaa ataacaaaca
     8221 aaaatatgca aaaaattcca tagtcatcta aaaaattata aatttctaac attacatgcg
     8281 tgataaaagg caaactcgcg cctaaatttt caaataaatc tttaaaatta ggcactacaa
     8341 aaagcattaa aaacaaaaat gctccgataa tacttaaaaa aaccaaagta ggatatctaa
     8401 aagccttttt taattgtttt tgactctcta agcttttttc tcgaagttta gaaatttgac
     8461 taaacacttc actgattttt cctgtctttt cagccgtttt tatcaaagct agctccgcac
     8521 gatttaatcc aaaattagca ttttcaaaag cttgatttag attttgggct aaaattaaat
     8581 tgtctaatat ttttttcata atcttgcaag aatgcataag atataattct ttaatcgctt
     8641 cttgaacact taatccaact tcacacaata aagccagctc tttaaaaaag agtatgaaat
     8701 tttcatcctt taatctctga aaattagatt tttgaatttc ttttatatca atgattttcc
     8761 aattctttga taaggctttt gcttgtgctg tatttaaatt ttcagctttt atagtttttg
     8821 tataattttg attgttttta agaaattcta cttcataaaa tttcatctta caacccttaa
     8881 aagctcatct atacttgtaa gaccttcttt ggcttttttt aaaccttgtt caaacatagt
     8941 ttgaaagcca tatttttttg caagctccat taaaatcgtt ttatcttgat tttccctaat
     9001 tgcacaagct aaatcttcat tgatctctaa gcactcagcg attaattctc tgccaaaaaa
     9061 tccactatga tgacaacgct cacatccttt tggttcaaaa aattcacctt caaattcaat
     9121 ataatgtttt ttgctttttt gcttacacca aggacaaagt tttctaacca aacgctgtgc
     9181 tataacaaga ctcaaagccg atgctatcaa gtaacttttt gcttgcatat ccaaaagcct
     9241 atcaatggta ctaagagcat cattagtatg caaggtgctt aaaagcaaat gacctgttaa
     9301 agaagcttta agtgcaatat ctaaactttc ttcatcgcga atttctccta tcatgataat
     9361 atcaggatct tgccttaaaa ttgctcttaa aacactatta aactcgactc caacttttga
     9421 attgagcaaa atttgctgca ctaaaggaat tttatattct ataggatctt ctgcggaaat
     9481 aatctttttt tcaatacttt tcaactcatt taaacacgcg tataaagttg tgcttttacc
     9541 actacctgta ggaccggtta ataaaatcat tccattggga cgatgtaaaa tcttttttaa
     9601 aatttctaaa tttttatttc caagatttag tttatacaaa tccaaaattt ctttatcatg
     9661 ttttaaaatt cttataacaa cactttcgcc ataaatcaaa ggcaaacatg aaacacgaaa
     9721 atcatatctt tcattttcaa aatctaattc aaaacttcca tcttgtgttt ttcttgattc
     9781 agctaaattc aaacaagcta aaaatttgac atgaaaaacc aaagcttcat aaatatcctt
     9841 ctcaaaaata gcaaattcac gcaaaattcc atcaacccta aacctaatca aagcatcatt
     9901 atttcttgcc tctatatgaa tatcactcgc atgaaaagat aaaatttcat gtaataaaaa
     9961 atcaaaaatt tgactgatgc aactttgatc atctcttttg tgattttctt gccattcaag
    10021 tctaagctta atgcttaatc ttttaatctc ctcttgaatg cgaatttgat ttaaaatttt
    10081 agctatcttt aattcatcgg caattgcagt gtcgattttt tcacaaatca taaaagtctt
    10141 aacttgctct aaaagctcta aagaacaagg tttggatcta ataatcataa agccgtcatt
    10201 gtttttaata agcagaaatt taaattttaa aagtaaagaa aaaggtatac cttcataaat
    10261 aaaatcatta tcttcatcta aatcaacaaa atgtaaatta caaaaatttg ctaatttgtt
    10321 aaaaaaatcc caagaagtga tattaaattt agtgcaaatt tcatcaagac ttatttcatt
    10381 atcaatataa gcttgaaaaa ttttatccat tctactttcc atctaattcc attaaaccat
    10441 aataatttat ataagcatct aaagcacttt gagcttcttt ttcttcacct aaagctcttt
    10501 tagcctgagc aaaaatcagc caagaatctt gtttttgctt gtcaagttca ttggctttta
    10561 aagcccaaaa tattgtcttt tgataagctt taatatcaaa atacttctta gctaaattta
    10621 atgccttttc atagcttgga ttttgataaa aagatttttt taaatcagaa atatttaaaa
    10681 ttttagaatc aatttctatc ttgctaatat gtgtattttc ctgcaccgct ttaacttctt
    10741 ctagttcttt atataacttt tccctagaaa tcttattttt ttcttgtaaa atttgcgctt
    10801 gaagaatctt ttgctccaaa tgctttttat gttcaatagc ctgcaaataa atattttttt
    10861 gcttattata tttttgcatt agcacaaaaa aacaaaatgc t
//
LOCUS       DAPIYB010000059        10785 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.060, whole genome shotgun sequence.
ACCESSION   DAPIYB010000059 DAPIYB010000000
VERSION     DAPIYB010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10785)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10785)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10785
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.060"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            73..1116
                     /locus_tag="RJ318_001249"
     CDS             73..1116
                     /locus_tag="RJ318_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDV7431114.1"
                     /translation="MKKNILLLGLCLSLSLSAKSVSDYKVGEELSDKEGVEYFKELSK
                     RPVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTESTLGPYSKLKKTSNEVNCISCH
                     MDNDGNGLPGTKKYVIPFLNILNNYPRLDIETMKIISVEDRIRGMGGTDSHRFPNDSK
                     EMKAILAYFKWLKEAYGIKDGVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGE
                     RGLGVKNDNYEQGSGHLYPSLLIYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDE
                     DALDIAAYVNTGFVRMPITTTENRAGLDTAYSKSPSLKPEYFASPQQNLDPKEYIKVK
                     YGPWKNPNHFPGE"
     gene            complement(1140..2489)
                     /locus_tag="RJ318_001250"
     CDS             complement(1140..2489)
                     /locus_tag="RJ318_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2130 domain-containing protein"
                     /protein_id="HDV7431115.1"
                     /translation="MQTLNQNEQIKCPSCGSFIDISTALYAQILDKAKQEMLKQKKEF
                     DDEVNAKRAEYTKALNDLKTQKIEQEKLINEQVSQKLLLEKQKFEQELLTQKQNFQKE
                     FSEKFNKEHENEMKIMQEELEKKSKELSEFLSIKAENERLKREQKENEERLKFQAKEE
                     AFKEFKEQESKNLEFEREKMRLEFQKSTQEQDLKYKELETNFKSVAQKLEDAQRRIEQ
                     GSQQLQGEAAELLIEEYIQSEYLSDEVKEVPKGVNGADCLHIVKDNFGNICGSILYES
                     KRTKEFNKEWLDKLKLDSIAAKSDIAVLITKTMPKDKEKTHFKEGILICTFNEFKGVL
                     AVLRESIINAYKLKNALQNKDEKNHILYEYLNSKEFNTQITFILKTYQNMKEELEAEK
                     RALQNIWKKRERAIENLSFNSTAIVSSLNAIFSDLQGGNLIGEEGIKSLENLAKDED"
     gene            2594..3796
                     /locus_tag="RJ318_001251"
     CDS             2594..3796
                     /locus_tag="RJ318_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HDV7431116.1"
                     /translation="MQKHTKIHGFAKFKLIVILALMSSIAPLSTDMYLPALSHVEQSF
                     QTNSFLTQLSIASFFIAFALGQLIYGPLSDIFGRKIPALVGIFFFIVSSLFCVIIDDI
                     YAFIALRFFEALGGCAGVVIARAIVNDLFEIKEAAGIFALMMVFSSLAPMLSPTFGGI
                     LLEYFSWHSIFATLFALGILLFLMILFGLKESAPHLKNKKFSHHEAMKSYKFVLSDKR
                     FLVYILCASFALAAMFAYITGSSFVFTQFFSLSEQKFALLFGANALGFVICANINARL
                     VLKYESEKILAKALMIMFISTVILLANAFFHPNFLLFELSIFTSIAMLGFIAPNTTTL
                     AMARFKEHSGTASAVLGTVQFGFAGLISFVVGAINANTPIILAFVMCACVLVANMIYF
                     LIKIKEKK"
     gene            3793..4494
                     /locus_tag="RJ318_001252"
     CDS             3793..4494
                     /locus_tag="RJ318_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDV7431117.1"
                     /translation="MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQ
                     KEVEADTLILPIKFTRSNNNLTNLYEELEQDKENIIKFLEKQGIKEDEISYNSPNIID
                     RLSDPYSNDTQAAYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEY
                     LYTKLNDIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYI
                     KTIRVVSTIEYYLKD"
     gene            complement(4524..6410)
                     /locus_tag="RJ318_001253"
                     /pseudo
     CDS             complement(4524..6410)
                     /locus_tag="RJ318_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002916381.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
     gene            complement(6980..10754)
                     /locus_tag="RJ318_001254"
                     /pseudo
     CDS             complement(6980..10754)
                     /locus_tag="RJ318_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343503.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
BASE COUNT         3449 a         1687 c         1544 g         4105 t
ORIGIN      
        1 cttattatgc ttaatattta agaaaaaata cactaaaatc aatttgaact gcaaataaaa
       61 aggaggaaaa tcatgaaaaa aaacatttta ttgcttggct tatgtcttag tttgagtctt
      121 agtgctaaaa gcgtgagtga ttacaaagta ggagaagaat taagcgacaa ggaaggagta
      181 gagtatttta aggaactttc caaaagacct gtgcaagaat ggccaaataa aaatttaagc
      241 atcaatgatg ttccaaaagg caagcaaggg gatttaatcc gttatggcat agagctttta
      301 agcaagacag aaagtactct aggaccctat agcaagctaa aaaagacaag caacgaagta
      361 aattgtattt cctgtcacat ggacaatgac ggcaatggtt tgccagggac aaaaaaatat
      421 gttattccat ttttaaatat cctaaacaat tatccaagac ttgacataga aacgatgaaa
      481 atcatctctg ttgaagatag aattcgcgga atgggcggaa ctgactctca tagatttcct
      541 aatgattcta aagaaatgaa agcaatttta gcttatttta aatggctaaa agaagcttat
      601 ggtatcaaag acggcgtaaa gcttgaagga gatttttttg ctaagatgaa ttttccaaat
      661 cgcccagctg accctgtgcg tgggaaaaag ctctttgaag aaaattgcgt tgcttgtcat
      721 ggcgaaagag gacttggggt aaaaaatgat aattacgaac aaggtagcgg acatttatat
      781 ccatctttac ttatctatcc tgatggtgga cacatggcta tgataccatt tttagcaaga
      841 tttttaaaat cagccatgcc ttttggtgcg agtgcggata atcctatatt aagcgatgaa
      901 gatgcgctag atatagcagc ttatgtcaat acaggttttg taagaatgcc tataaccact
      961 acagaaaatc gtgcaggact tgatacagct tatagcaaat ccccatcatt aaaacctgag
     1021 tattttgcct caccgcaaca aaatttagac cctaaagaat acataaaagt aaaatacgga
     1081 ccttggaaaa atccaaatca cttcccagga gaatgattaa ttttgggcta agcccaaaat
     1141 taatcctcat ctttggctaa attttcaaga cttttaatcc cttcttcgcc tatcaaattt
     1201 ccaccttgta agtcgctaaa tatcgcattt aaagaactca ctatggcagt ggaattaaaa
     1261 cttagatttt ctatagctct ttctcttttt ttccatatat tttgcaaagc ccttttttca
     1321 gcttctaact cttctttcat attttggtaa gttttgagta taaaagtgat ttgcgtgtta
     1381 aattccttag aatttaagta ttcgtataaa atgtgatttt tttcatcttt gttttgcagg
     1441 gcatttttga gtttataagc gtttataatg ctttctctaa gcactgctaa aacacctttg
     1501 aattcattaa aagtacagat caaaattcct tctttaaaat gcgttttttc tttatctttt
     1561 ggcatagttt ttgtgatcaa aactgctata tcactttttg cggctatact atctagttta
     1621 agtttatcaa gccattcttt attaaattct ttagtgcgtt tgctttcata caaaatactt
     1681 ccgcaaatat ttccaaaatt atcctttact atatgcagac aatcagctcc atttacgcct
     1741 tttggcactt cttttacttc atcgcttaaa tactcacttt gtatgtattc ttctatgagt
     1801 agttcggctg cttcgccttg gagttgctgt gagccttgtt ctatcctgcg ttgtgcgtct
     1861 tctaactttt gggctacact tttaaaattc gtttctagtt ctttgtattt aagatcttgc
     1921 tcttgagtgc ttttttgaaa ttcaagacgc attttttctc tttcaaattc caaatttttg
     1981 ctttcttgtt ctttaaattc tttaaaagcc tcttctttgg cttgaaattt caatctttct
     2041 tcattttctt tttgctctct ttttagcctt tcattttcag cctttatgct taaaaactcg
     2101 ctaagctctt tgcttttttt ctcgagttct tcttgcatga ttttcatttc attttcatgc
     2161 tctttgttaa atttctcgct gaattctttt tggaaatttt gcttttgcgt gagaagttct
     2221 tgttcaaatt tttgcttttc taaaagaagc ttttggctta cttgctcgtt tatgagtttt
     2281 tcttgttcta tcttttgagt ttttaaatca tttaaagctt tggtatattc agctcttttg
     2341 gcatttacct catcatcaaa ttcttttttt tgttttagca tttcttgttt agctttatct
     2401 aaaatttgag catataaagc agtactgata tcgataaaac ttccacaact tgggcatttg
     2461 atttgttcat tttggtttaa agtttgcata aaaaatttcc ttagaatttt tctctaaatt
     2521 taacatagaa aaacaaagat tattctaaga ttgactcgtt aaaatcattc ttttagaata
     2581 attaggatta caaatgcaaa aacacaccaa aattcacggc tttgctaaat ttaaactcat
     2641 cgttatcctt gctttgatgt caagcatagc accactttct acagatatgt atttgcctgc
     2701 actttctcat gtggagcaaa gttttcaaac taattctttt ttaacccaac ttagtatcgc
     2761 aagttttttt atcgcttttg ctttaggaca gcttatatat gggcctttaa gtgatatttt
     2821 tgggcgtaaa attccagctt tggtggggat atttttcttc atcgtttcga gtttgttttg
     2881 tgtgattatc gatgatattt atgcttttat cgctttgaga ttttttgaag cacttggggg
     2941 ttgtgcaggt gtggttatcg caagggctat tgtcaatgac ttgtttgaga tcaaagaagc
     3001 tgcagggatt tttgctttga tgatggtttt tagttctctt gctcctatgc tttcaccaac
     3061 ctttggggga attttgctag agtatttttc atggcatagt atttttgcga ctttgtttgc
     3121 tttaggaatt ttactttttt tgatgatact ttttggttta aaagagtccg cacctcatct
     3181 taaaaacaaa aaattttccc atcatgaagc gatgaaaagc tacaaatttg ttttaagcga
     3241 taaacgcttt ttagtttata tactatgtgc ttcttttgct ttggcggcga tgtttgctta
     3301 tatcacagga tcaagctttg tttttacgca gttttttagc ttaagtgagc aaaaatttgc
     3361 tttgcttttt ggggcaaatg ctttaggttt tgtcatctgt gcaaatatca atgcaagatt
     3421 ggttttaaaa tacgaaagcg aaaaaatttt ggcaaaagct ttgatgataa tgtttatatc
     3481 gactgtgatt ttacttgcaa atgccttttt tcatccaaat ttcttgcttt ttgaacttag
     3541 tatttttaca agtatcgcta tgcttggttt catcgcaccc aataccacga ctttggctat
     3601 ggcaaggttt aaagaacata gcggaactgc ttctgcggtg cttggaacgg tgcaatttgg
     3661 ttttgcaggg cttatttctt ttgtggttgg ggctattaac gcaaatacgc cgataatcct
     3721 tgcttttgta atgtgtgctt gcgtattggt tgcaaatatg atatattttc taatcaaaat
     3781 aaaggagaaa aaatgaaaac aaataatatc tttatggctt tagccatagt tttggcaagt
     3841 ttgattctag cttttggatt taacaaggct ttaagtgatt ttaaaacact tgaaagaagt
     3901 gtaagtgtaa agggtttaag tcaaaaagaa gtcgaagcgg atactttgat acttcctata
     3961 aaattcacaa gatcaaacaa caatcttaca aatttatacg aagaactaga acaagataaa
     4021 gaaaatatca tcaaattttt agaaaaacaa ggcataaaag aagatgagat cagctacaac
     4081 tcgccaaata tcatagatcg tttaagcgat ccttatagca acgacactca agctgcatac
     4141 cgatacatag gcactgcgaa tttactcatc tatactcaaa atgtaaagct tggaaaaagc
     4201 atactagaaa acatttcaag tcttgcaaaa tttggtatag taacaaaaat cgatgattat
     4261 gatatagaat acctttacac caagctaaat gatataaaac cacaaatgat agaagaagca
     4321 acgctcaatg ctagaaatgc agcgataaaa ttcgcacaag actcaaacag ccatctaggc
     4381 aagataaaaa aggcttctca aggacaattt agcatcagca acagagataa aaacacccct
     4441 tatatcaaaa ctataagagt ggtttctact atagaatact acttaaaaga ctgatgataa
     4501 aatttcaagc taagctttaa ggcttagctt ggcactatgg aattttttcg tgcggttttt
     4561 tggagtgaga atatacaaag caaaagtata atgccatata aaacaccagt ggattttatg
     4621 gtgttttctg taatctcgtc ttgatttata atctttaaaa tcccttcaaa acttgattta
     4681 aatttcaaaa gagccaagac actttttaat ttatcttgac tgtctttttg atcaaaaaga
     4741 gccatttgct caggtgatag tttttcagat atagaaaaat tactttttat cgcatataaa
     4801 atatctattt cttgattaaa atttaatttt aaaaatttat taagttgagc agatacaacg
     4861 ctattgttgt ttttattgtc tatctcttct atgatatttt ttacatttga tgtgttattt
     4921 tctagttcat ttaaaacctt tttataatca cttacatatt tatcattata cactttagat
     4981 aaaatttctt ttaatttttc tttatttgct attatcaaag ctttagctga atttaactct
     5041 gtaaaagaaa tattttgatc ttttaaatgg agattaaaat cattttgcaa tatgcttgct
     5101 agatttacaa tagcactcgt atttaaatca tttaaccttt tttcaaattt actttcataa
     5161 agtttatctg atgaaaaaat tcctacaaaa ggattgataa gttgaggttt taaaataaca
     5221 accccaatta gacaaatata ggcaaacaat ctcgaaataa aaacaaaaag tttaatttta
     5281 cagataaata aaagatagga aattaatata cctacaaaat aaattaaaaa ataaaaagct
     5341 ggaatgtata ttggtgataa aaatgatact atgctgatta taaaaagacc ataaataaga
     5401 aataataaaa tagcaccatg ttgatataat tgccttgtaa ggctaataaa aataattaat
     5461 aacattaata aaacgatata attcattgca gctattgtca ttggaccaaa agataatata
     5521 aaatccatat tatttaaaaa taataagcca aaaatagcat atgatgaaat cattaaaatc
     5581 gtaaaattta aaatttttaa gaaatttgta tggtgattgc tagtattcct ataaacttgt
     5641 aacaaaacac aatcaaacca taaagtaaaa tctagcattg tttttccaag actactaatt
     5701 tttctataga attttaaata ctcaagcttt aaaattctgt cgattgaagc tatacaaaat
     5761 atgcaagata aaataatttg tattattttg catatacttt ttataacatt gcaaaatatc
     5821 tcaataattg ataataaaaa accaaagatt gatcttccta taagcattat aaaacaaaca
     5881 acaaaatcgc aaatttttat atacttgtca cttaaacttt gaatctttgc aagtatattg
     5941 cttggattgt tgcttggttt ttttattact gattttttta ttttttgaat atttttaata
     6001 ctatctttat tatcaccacc tagttgaatt tctaactctt tctctttcgc ataaagctct
     6061 aacttgtgcc actcttgagc ttctaaggta ttattttgag tgattaaaac atcttttata
     6121 accctgaaag aatcttttaa atttttagca tatcttaatt tatgttcgtt tttataactt
     6181 tcatcttgat agttatcttc tatatatttc tccactgatt taaaatctag cttatctata
     6241 tcgacattga ttaaatttac agcttttggt tctttaaaat aacaagcgct aaaattcgga
     6301 gttttataaa acttcactcc ataaaaacaa gctatttttt caaattcgca ttcgtgaaag
     6361 tcgacataat ctttaaaatg agaattatta aaataaacat tatctttaaa tttagacatt
     6421 ttaaaactaa ctttattttc aaattcaaag ttcataaaat taactttttc ttttatttca
     6481 caaaaatcaa acgtaaaagt accttttata gtagcattag aaaagccata taaattaaaa
     6541 tcattaaatt cacatttttg aaattcgata tttccatcta tatgattatt gatagatatt
     6601 tgtttaaatt tgcagtcatt aatgctaatt ttatcaataa cttcaactct cccattaaat
     6661 tgcaaatata attcattaca gttattaata aacaatttat taaatttgac attatcatta
     6721 attatcaaag atagtttttt cacattatca aaaactaaat cttgctcaaa aagcatatta
     6781 tttaaatgta tttctaaaat cttattttcg tcataatgtc gcttaaaatt atctttattt
     6841 ccatcaaaac aacaactact ttctataata tattgttttt cactatttaa ctttgcttca
     6901 ccttttatat aattttcaaa ttttatatct tcttcattat tgatattttt tttagataaa
     6961 aaactactta ccaaatccat tatttccctt ctatgatttt tatttcttct tcggtgagat
     7021 tgtaaagttt ataagtcaaa gaattgattt tattttctag ttcttgggta tttgcgtttt
     7081 tgtcttgttc tttggctttt aaaatttcat cgactaaatt tataagctca tcggctattt
     7141 tttgattttt agaatttatt tttggtatag gaaacttttc tacatattga tttgataata
     7201 aaaagccttt gtcagaatac aaatgtccta tatttttaaa ataataaaat atcaaactag
     7261 aatttaaaaa ccctaaaaga tatttgagtt catttttaga atttgctacc ataaaagcca
     7321 tagagtctaa caaaatacat tctctttcca agataaaact tggctcttgt gttattcttt
     7381 gccaacctag cttttctttt tcaaattctt gataatagtt tgctccccat ctttgcaaac
     7441 aataccattc ataacgaatt cctgtttctt ctttatttct tttagataat ctttctttat
     7501 gagacaacaa gtgcttatat aagctcggat attgttcttt taaatcttgt tcattttcta
     7561 gcattgtctt tggtttttca acatttggaa aatgccaagg tataaatatc acccaaagtc
     7621 ccgcccactc gtaactatat ctttttatat cgcgtccgcg tagcattttg cgtatgagtt
     7681 tagcggtgcg ttctttttcg gcttcatctt tgcaatttgc taaaatttca tttctttttt
     7741 cagtggtgat gataaaggct tcattatagc ctgttaaaat tccacgatat atattaagtc
     7801 cttgccattc tttaagcgga gttcctatgc gttctatctt agcctttaag gcactagtat
     7861 tctcatcgct aaaagtgaag ctttctttgc ttaaagaatt ttgcgaaaat tctgcaaagt
     7921 ccttatataa gccaatgtca taagcacaag tttttaaaat ttcattgctt agggcaaggt
     7981 atttgaattt attatctttg ctttttgatt tttcaaaaca aagtatagaa gtatctaccg
     8041 tagcactatc aaaaactttt atgccgttta aatcagtgta ttctaaaaac ttaacatttt
     8101 taagcaaaaa ttcacgcaaa gcttccccat atcctgcacg cgtgtatttg ttagaagtga
     8161 tatagctcaa tacccccccc cctatctttt aaaacattaa atcctagttc ataaaaataa
     8221 gtataaatat cgctcgtgcc tttataaacc ttataatttt tagctaaatg ggacttgagt
     8281 tctttaagct cctcttgtct tatataaggt ggattgccga tgatgagatc aaagcctttg
     8341 aaatttccat catcgtccaa aatttcaggg aattcaaaac gccattcaaa aggatgattg
     8401 ctttctaggt tgaagatatt gtcgtattct tttttaagat ttgcaaattc ttttgtggct
     8461 tctttttcat caaagtcaaa aagagtcaaa ttcgcactaa caaagaattt caaattttca
     8521 tcatctacgg ctaagaaatt tccgtatttt ttagagtatt tttcacattt atcattaaag
     8581 cttttcattt cttttttaaa tttatctgca aagcagaaat ttttaaaaga aattttgaga
     8641 ttttttatct cttggttgat atggctttta tctgtgtaaa agccttcttt atagtctttt
     8701 actatgcgtt tgtatttgcc catacgttct ttgatgttag gatagtggtt taggcttttg
     8761 cctgtttcaa agtaagatac caaagaattt ccgcatttta tgtttatatc gatgtttggc
     8821 aatgttttaa gatcgtgata attttcatca tcaaagcttt gataaaaact atgttttaaa
     8881 agctctatcc aaagccttag cttggtgatc tcgcatgagt tagggttgat atcgactcca
     8941 aaaaggttat tttctatgat gtctttttta gtgtgaaaaa gttcttgctg gataagatgg
     9001 gctttatctt taggcgtact tgggcgttta tactctataa actcaccttt tctacccgtg
     9061 atgagaattt catcgttttg cacttctaga taaaattctt catcaaaaag atttagctca
     9121 tcataaatgc ttaacataac atttaaagca gaaaccaaaa aatgcccgct tcccaccgca
     9181 ggatcgcaaa tttttatgga atttaaaagc tctttttgtg cttttttatc ttcttttctt
     9241 aaagactttc ttagttcgct tatatcttta gcattaagat caaattgagc gttgaattta
     9301 tcaagcacaa cttttgtgat actttcttta cacatataag aagtgataaa gcttggcgtg
     9361 taaaagcttc cttctttgta gccattgagt ttttcaaaca catttcctaa aacacttgaa
     9421 cttatgagtt ctttttggct taaaatttcg ctttgctcat catcgctacc aaaatcaaaa
     9481 ctatccaaaa attcaaacaa gtattctaaa agccccactt gtcctttttt agccttgcat
     9541 ttatcatctt ttagtacggt gtttttatag taaaaaagct ttaagtcatt acttaagctt
     9601 gaaatttcaa gtgtgttttc tatgctttgt ttttcaaaca aagaagaatt tagataaggc
     9661 agataggcaa attcgctttt ctttcgcgtg cttttttctt tggctaaaac ttcaaagaaa
     9721 agttcgctaa gcttgtcaaa atcagggatt tttttgaaat ttaaaaattt caaattttta
     9781 tcatcattaa aacgcaccaa atttgactct ataagcttta aaaacaaaat gcgattaagc
     9841 cataagatca aaagttttaa gatggtttca aaattttctt ctttaagctt agaatttata
     9901 gcggtgtaga aagtgccttg ctcttctttg ctttcttcac tttttgcgat gatgagtttt
     9961 gagttttgtt tgctctcgca aagccctaag atatataaaa gctctttgta aaaagcattg
    10021 ttgagtgaat ttgcatcgtt ggggttaaac tcacttagca aaaagtctct atgaaaagtt
    10081 ttataaatac ttgctaggtt tttaaaattt gatttttgtt tgtcttttaa aaacgtcaag
    10141 tcaatcaaaa agccttttaa gttttctttg gaattttcta tgagtttggc tacttcttta
    10201 tagaattctt cagtattacc tttgaaaagt gaatttggat tacaaaattc ttcaaaaagt
    10261 tttttaaaac ttggattttt ataaaaaagc tcttcaaact cactaatttt aaaaatgtaa
    10321 aatttataaa aatctgtgat gataataaat tttaagctaa aactatactc tctatttcta
    10381 aaataatata aaatagtctc gtgtaaggct ttagaattta cctttgtatg agtgataaat
    10441 tcttttgaat ttggcttttt agcctcaata agaacttcta agtctttact aaactcatct
    10501 ttagagatgg ataagtcaat ctcacttttg cctttttgct tggttttgat gtgggttttg
    10561 aaatttaaca tggttaaaaa tggactaagt gcattagcta caagataatc ttcattttca
    10621 ctttgcgaac tttcaagtct ttctagatat tgcattaaag ccttgttaaa tatatcaaat
    10681 tcattttgca tgatttgctt tttgcggtag tatgggttga aaaaatcttt ttcatttagc
    10741 aaagtgaaat gcatttttaa cctttataaa aaatattttg tattt
//
LOCUS       DAPIYB010000060        10611 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.061, whole genome shotgun sequence.
ACCESSION   DAPIYB010000060 DAPIYB010000000
VERSION     DAPIYB010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10611
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.061"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            230..502
                     /locus_tag="RJ318_001255"
     CDS             230..502
                     /locus_tag="RJ318_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HDV7431118.1"
                     /translation="MMPFSDEELINPVKASLEKSLPMLERDGGGLEFLGIKNGIVYVH
                     LIGACKGCASSGTTLKYGLERQLKIDIHPEITIINLNGGADEFAKL"
     gene            489..1040
                     /locus_tag="RJ318_001256"
     CDS             489..1040
                     /locus_tag="RJ318_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDV7431119.1"
                     /translation="MQNYKKLGIEHFYKKDFKTAKMYFSMAYEKRKNKRLLNFICLCD
                     LALKSPKEASLLFDFYIEHYKISSIDKDLEEILSTIEFKKQENKQENEFEDGHALNYQ
                     DFLKSEEELGFQKSFENIINSTKLVIDNRDDFLDFLEKLLDNGYKDMTLNYIENVMPH
                     FWANDRFIKLQEKLMGFKSEIKT"
     gene            1024..2307
                     /locus_tag="RJ318_001257"
     CDS             1024..2307
                     /locus_tag="RJ318_001257"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDV7431120.1"
                     /translation="MKLKLENSFITDNTLECEKECFFLQTTQNAKFHAQALEKGAKII
                     DVNECKKLLKIDEKIQIIGITGTNGKTTTAAAIYSILLDLGYKCGLCGTRGAFINDEQ
                     IDEKSLTTSPILKTLEYLQIATQKKCDFFIMEVSSHALVQNRIEGLNFAAKIFTNITQ
                     DHLDFHGTFENYKEAKELFFTDESLKFINKDALAIKFNVRNAFTYGIENPALYQIKAY
                     SLEEGISTIVTNKNQTFHIDSPLLGLFNLYNLLVASACVNELVKPDLKDLEKAISGFG
                     GVCGRVEQVAKGVIVDFAHTPDGIEKVLDTLKNKKLIVVFGAGGDRDKTKRPLMGKIV
                     EHFAKIAIITSDNPRSEEPKTIMEEILSGFTKKEKVLMIEDRKEAIKKALELKENDDL
                     VVILGKGDETTQEIKGIKYPFSDKVVVNEILKNQG"
     gene            2311..2622
                     /locus_tag="RJ318_001258"
     CDS             2311..2622
                     /locus_tag="RJ318_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDV7431121.1"
                     /translation="MFENMDFSKMGELLNQVQEKAKNIELELANREFSAKSGAGLVKV
                     SANGKGEIIDVSIDDSLLEDKESLQILLISAINDVLAMVAQNRSSMANDVLGGFGGMK
                     L"
     gene            2619..3713
                     /locus_tag="RJ318_001259"
     CDS             2619..3713
                     /locus_tag="RJ318_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HDV7431122.1"
                     /translation="MKKILIICMLFTLSFGIERPKFEDFLAGYERNKASMLNYEGMPA
                     FALSENLLAVLKQPNAKLNKYVKYDPFLNLYLVRTDFSLIPTPMGDEEKLTRNDWVGI
                     WDPNKPYIGHIKYLAQNIDEKDQLDFNSKIGLLGTPCCEMMGIALNNSSFIGNRYLKH
                     FMKYNDVYWGDIGVDFVVRENKIYVNNVRKNPQFLINDQVISVDGLPANDLRKLNEKI
                     LFADRGSTLYFQVLRDNMDLNISTEVFAKDLSKFNLPDSKPKPKITNFTSNLGLTVNA
                     SLVVTKIDPKSKVSNAGFMVGDKILRVNNIILNNFKELQNILSAGNDFSILIERKSTK
                     LPLSNFNNELGGNANSGGDGKFQFFIRLTK"
     gene            3710..4555
                     /locus_tag="RJ318_001260"
     CDS             3710..4555
                     /locus_tag="RJ318_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDV7431123.1"
                     /translation="MNLKELFIHHLEKNLPKVESFHPFFNEALALMLKAGGKHFRAQL
                     LLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDET
                     TAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRL
                     SLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDV
                     TTSQEQSGKPTNNDIHKNSFVNLLGLEQAIKTKENLLSECEQDLEKLNEKLAQMIQNL
                     IIQYL"
     gene            4566..6464
                     /gene="tkt"
                     /locus_tag="RJ318_001261"
     CDS             4566..6464
                     /gene="tkt"
                     /locus_tag="RJ318_001261"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDV7431124.1"
                     /translation="MNIQILQEQANTLRFLSADMVQKANSGHPGAPLGLADILSVLSY
                     HLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQLHSKTPGHP
                     EISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGIS
                     YEACSLAGLHKLDNFILIYDSNNISIEGDVGLAFNENVKMRFEAQGFEVLSINGHDYE
                     EINKALEQAKKSTKPCLIIAKTTIAKGAGELEGSHKSHGAPLGEEVIKKAKEQAGFDP
                     NISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSAKKELLERLLNPDFNKIAYPDFK
                     GKDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTELHSMGDFVEGKNIHFGIREH
                     AMAAINNAFARYGIFLPFSATFFIFSEYLKPAARIAALMKIKHFFIFTHDSIGVGEDG
                     PTHQPIEQLSTFRAMPNFLTFRPADGVENVKAWQIALNADIPSAFVLSRQKLKALNEP
                     VFGDVKNGAYLLKESKEAKFTLLASGSEVWLCLESANELEKQGFACNVVSMPCFELFE
                     KQDKAYQERLLKGEVIGVEAAHSNELYKFCHKVYGIESFGESGKDKDVFERFGFSVSK
                     LVNFILSK"
     gene            6466..7575
                     /locus_tag="RJ318_001262"
     CDS             6466..7575
                     /locus_tag="RJ318_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7431125.1"
                     /translation="MNTNFKFQNNTLFIFGIWDKTSIYKLKIKDFLALIQSKEVIFDF
                     KDLKAIDTAGVRFFLALENDLKNKNIKITKEGLNSRFQTLFELCEKNYQRLGKTKKSH
                     QNFSEYFIDLGKLSLELLKILRKFINFTGAFFTSLFLCLKNPKNFRFIAFLYHIENSA
                     FKALPIVILTALLVGVVLAYQAAYQLAQFGANIFIVDLMGISATRELAPLIAAIVIAG
                     RSASSYTAQIGVMKITDEIAAMNTMGFRSFEFIVIPRVMALVVAMPLIVAISDAISII
                     GGMMVAKLNLDISFAEFLRRFREAVDIKHIFIGLAKAPIFGFLIGLIACFRGFEVKNT
                     TQSIGIYTTKSVVNAIFWVIAFDALFSVILTSTGI"
     gene            7576..8298
                     /locus_tag="RJ318_001263"
     CDS             7576..8298
                     /locus_tag="RJ318_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7431126.1"
                     /translation="MVIKAQNIITKFGEKIVHDGVSFEIKKNEIFGILGGSGSGKSVL
                     LKQMLMLEHFDDGEYEILGYKLKNINEEDALALRKKWGVVFQFAALFSFFNVYENIAI
                     PLKEYTHLDENSIQELVLMKLKMVGLNESVLKQFPSELSGGMQKRVAIARALALDSKL
                     LFLDEPTSGLDPHSSREFDDLVLELKKSFDLNIILVTHDKESMKNLLDRFIILENKKV
                     GFCGTYEELRLQNERLFKRFME"
     gene            8301..9191
                     /locus_tag="RJ318_001264"
     CDS             8301..9191
                     /locus_tag="RJ318_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HDV7431127.1"
                     /translation="MENRANYFFVGLFVFGVFFASLGFILWLGGYSKEESFKYYEIHT
                     QESVAGLGIKAPVRLLGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQL
                     QGITGLKFIQLQGGSKNSKDLVSMQGKLPVIPFKESFLATIDRQSEHIFSLVKTADDK
                     SKELLSEKNLKNLEILLQNLAELSANLNANSKNLSLNLSNASLKIGKMADNISLSAQN
                     FNSSLKNIKESTMILKNFIKKADEKLNTYDDIKASLMQNLELFKRVLIESNILIENLQ
                     NSPADLIFKETKPKLGPGEK"
     gene            9191..9790
                     /locus_tag="RJ318_001265"
     CDS             9191..9790
                     /locus_tag="RJ318_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7431128.1"
                     /translation="MLKQLFCILTFIFMLCGCSLRHETINKNENIILKDEGIDSNIFF
                     KKTGKILKIRNANAPLYLNSRAIVYIDNGFSNKYAHYFWGDLPSNLYSFLILSKFEQS
                     NIFTTLLSSTSSLSADYSLESRINSFEQILNNNENYAQISISVNFINLENNQIIAHKI
                     FNTKEKIEKKDIRSTYNAFQKALNKIGNEIVFWVNSNLS"
     gene            9846..10346
                     /locus_tag="RJ318_001266"
     CDS             9846..10346
                     /locus_tag="RJ318_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431129.1"
                     /translation="MKSDLDIFKKHLGEIQGVNEFKANQICSQINDANDFIGALQVLD
                     MSLKKIEKSILERIDENSDDMQKRTLDATASQLIQNCSFMGTALFGNIFNVYVGKKLF
                     EFEIANPLLILQTSNYEGVLAYIQDKRDEIKIILSELSTAITMGETMDNAGIYNSTMD
                     FKNLFK"
BASE COUNT         3933 a         1522 c         1782 g         3374 t
ORIGIN      
        1 aaaagaatat ttaagcttct taaaatatga aaaaaacgaa gaaattctgc aacaatcatt
       61 tagaaactta aatggaattt ttggtaacaa aaactttaca gcttatgatt taggatttag
      121 catacaaaat aatgacgaac ctttttaatt tatttaaatt tcaagcctta atttaccttt
      181 ttttaaacac aatcacgcta aagtatataa aaatttttaa ggataaatta tgatgccttt
      241 tagtgatgaa gagcttataa atcctgttaa agcaagttta gaaaagagct tgcctatgct
      301 tgaacgtgat ggcggagggc ttgaattttt aggaattaaa aatgggatcg tttatgtcca
      361 tttaatagga gcttgtaaag gctgtgcatc gagtggaaca acgctaaaat acggtcttga
      421 aaggcaactt aagattgata ttcatccgga aatcactata atcaatttaa acggcggagc
      481 agacgaattt gcaaaattat aaaaaacttg gaattgaaca tttttacaag aaagatttta
      541 aaactgcaaa aatgtatttt tctatggctt atgaaaaacg caaaaataaa cgcttgctaa
      601 attttatctg cctttgtgat cttgctttaa aatctcctaa agaagcttct ttactttttg
      661 atttttatat agaacattac aaaatctcta gcattgataa agacttagaa gaaattttaa
      721 gtacaattga atttaaaaaa caagaaaaca aacaggaaaa cgaatttgaa gatgggcatg
      781 cgttaaatta tcaagatttt ttaaaaagcg aagaagaact tggctttcaa aaaagttttg
      841 aaaatatcat taacagcact aaattagtta ttgataatcg tgatgatttt ttagattttt
      901 tggaaaaatt acttgataat ggctataaag atatgacttt aaattacata gaaaatgtta
      961 tgcctcattt ttgggcaaat gatagattta tcaaactcca agaaaaactc atgggattta
     1021 aaagtgaaat taaaacttga aaattcattc attacagata acaccttaga gtgtgaaaaa
     1081 gaatgctttt ttttgcaaac cacacaaaat gctaaatttc acgctcaagc cttagaaaaa
     1141 ggtgcaaaaa tcattgatgt aaatgagtgt aaaaaacttt taaaaatcga tgaaaagatt
     1201 caaatcatag gaatcacagg aaccaatggc aaaaccacaa ccgcagcagc gatttattct
     1261 atcttattgg atttaggtta taagtgtggg ctttgtggga caagaggagc ttttatcaac
     1321 gatgaacaaa tcgatgaaaa atccttaacc acctccccta ttcttaaaac cttagaatac
     1381 ctacaaatag ccactcaaaa aaaatgtgat tttttcatca tggaagtaag ctcacacgca
     1441 ctcgttcaaa accgcatcga aggcttaaat tttgctgcta aaatttttac caatatcact
     1501 caagatcatt tagattttca cggtactttt gaaaattata aagaagcaaa agaacttttt
     1561 tttaccgatg agagtttaaa atttatcaac aaagatgctt tggctattaa atttaatgtg
     1621 cgtaatgctt ttacttatgg catagaaaat cctgctttat atcaaatcaa agcttattct
     1681 ttagaagaag gcattagtac tattgtaaca aataaaaatc aaacttttca catagactcg
     1741 cccttgctag gactttttaa tctttacaat cttctagttg ctagtgcttg tgtgaatgaa
     1801 ctcgtaaagc ctgatttaaa agacttggaa aaagctatca gtggatttgg cggggtttgt
     1861 ggcagggtag aacaagtagc aaaaggtgtg attgtagatt ttgctcatac gcctgatggc
     1921 attgaaaaag tgcttgacac tcttaaaaat aaaaaactca tcgttgtttt tggagcaggt
     1981 ggagatagag ataaaaccaa acgcccttta atgggaaaaa tcgtcgaaca ttttgcaaaa
     2041 attgctatca ttacaagtga caatccacgc agcgaagaac caaaaaccat catggaagaa
     2101 attttatcag gctttactaa aaaagaaaaa gttttaatga tagaagatag aaaagaagct
     2161 ataaaaaaag ctttagaact aaaagaaaat gacgatttag tcgttatttt aggcaaaggt
     2221 gatgaaacta ctcaagaaat taaagggata aaatatcctt ttagtgataa agtagttgtt
     2281 aatgaaattt taaaaaatca aggataatca atgtttgaaa atatggattt ttctaaaatg
     2341 ggagaacttt taaatcaagt tcaagaaaaa gcaaaaaata tagaactaga acttgcaaat
     2401 cgtgaattta gtgccaaaag cggagcagga cttgttaaag taagtgccaa tggaaagggt
     2461 gaaattatcg atgttagcat tgatgattct ttacttgaag ataaagaatc cttgcaaatt
     2521 ttacttattt ctgcaattaa tgatgttttg gctatggttg cacaaaatcg ttcaagtatg
     2581 gcgaatgatg ttttaggcgg ttttggaggt atgaaattat gaaaaaaatt ttaattattt
     2641 gcatgctttt tactttgtct tttggtatag aaagacctaa atttgaagat tttttagcag
     2701 gttatgaaag aaataaggca agcatgctca actatgaagg aatgccagct tttgcactca
     2761 gtgaaaattt acttgctgtg ttaaaacagc ctaatgctaa gcttaacaaa tatgtaaaat
     2821 acgatccatt tttaaattta tatcttgtaa gaactgactt tagcctaatc cctactccta
     2881 tgggtgatga agaaaaactt actcgtaatg attgggttgg aatttgggat cctaataaac
     2941 cttatatagg gcatattaag tatttagctc aaaatattga tgaaaaagat caacttgatt
     3001 ttaattctaa aataggactt ttagggactc catgctgtga aatgatgggg attgctttaa
     3061 ataatagctc ttttataggc aatcgctatt taaaacattt tatgaaatat aacgatgttt
     3121 attgggggga tattggcgtt gattttgttg ttcgagaaaa taaaatttat gttaacaatg
     3181 taagaaaaaa tccacaattt ttaatcaatg atcaagttat aagtgttgat ggcttacccg
     3241 ccaatgattt aagaaaactc aatgaaaaaa ttctttttgc agatcgcgga agcactcttt
     3301 attttcaagt gttgcgtgat aatatggatt taaatatttc tactgaagtt tttgcaaaag
     3361 atttgagcaa atttaacctt cctgattcta aaccaaaacc aaaaattaca aatttcacaa
     3421 gcaatcttgg tttaacggtt aatgctagtc ttgttgtaac taaaatagat ccaaaatcaa
     3481 aagtatcaaa tgcaggattt atggtaggag ataaaatttt acgcgttaat aatattattt
     3541 taaataattt taaagaatta caaaatattt taagtgctgg taatgacttt agcatcttaa
     3601 ttgaacgcaa aagtactaaa ttacctttat caaatttcaa caatgaacta ggcggaaatg
     3661 ccaactcagg tggcgatggt aaatttcaat ttttcataag gcttactaag tgaatttaaa
     3721 agaacttttt atccatcact tagaaaaaaa tctacccaaa gttgaaagct ttcatccttt
     3781 tttcaatgaa gctttagcac ttatgttaaa agcaggagga aagcattttc gcgcacaatt
     3841 gcttttaagc gtagtgcaaa gcaataaacc tgaactttta aatcaagctt tagatgtagc
     3901 tttagctttg gaatttatcc atacttattc actcatacac gatgatttac ccgctatgga
     3961 taatgcggac tttagacgag gaattccaac cttacacaaa agctacgatg aaactacagc
     4021 catcttagta ggtgatgctt taaataccga agctttttta gttctaagtc atgctcattt
     4081 aaaagatgaa atcaaaatca aactcatcaa aacccttgcc tttaatgcag gacttaatgg
     4141 aatggtcata ggacaagcta ttgattgttt ttttgaagac aaaagactga gtttaaatga
     4201 acttgagttt ttgcatacac ataaaaccgc aagattgatc gccgcagctt taaaaatggg
     4261 ttgtgaaatt tgcgaactta acaacgaaga aagcaatcaa atttacaaac ttggtttaaa
     4321 actaggactg atttttcaaa tcaatgatga tattatcgat gtaactacaa gtcaagaaca
     4381 aagcggaaag cctaccaaca acgatattca taaaaattct tttgtcaatt tgcttggact
     4441 tgaacaagcc ataaaaacaa aagaaaatct tcttagtgaa tgcgaacaag acttagaaaa
     4501 acttaatgaa aaactcgcac aaatgataca aaatttaata attcaatact tataaaggca
     4561 aaataatgaa cattcaaatt ttacaagaac aggcaaatac tctaagattt ttaagtgctg
     4621 atatggtgca aaaagcaaac tcaggacacc caggtgcacc tttgggctta gcagatattt
     4681 taagtgtttt aagttatcat ttaaaacaca atcccaaaaa tccaacttgg ctaaaccgag
     4741 atagacttgt attttcaggc ggacatgcaa gtgctttgct ttatagtttt ttacatttaa
     4801 gcggctatga cttaagctta gaagatctta aaaatttccg ccaacttcat tctaaaaccc
     4861 ctggacaccc tgaaatttca actcttggag tagaaatcgc tacaggccct ttaggacaag
     4921 gcgttgccaa tgctgtaggc tttgctatgg cagcaaaaaa agcacaaaat ttgctaggca
     4981 gtgatttaat cgatcataaa atttattgtc tttgcggaga tggggattta caagaaggca
     5041 tttcttatga agcttgttct ttagcaggac ttcacaaact tgataacttc atacttattt
     5101 atgatagcaa caatatctct atagaaggcg atgtaggttt agcctttaac gaaaatgtaa
     5161 aaatgcgttt tgaagcacaa ggatttgaag ttttaagtat aaatggacac gattatgaag
     5221 aaatcaataa agccttagaa caagctaaaa aatccacaaa accttgtctt atcatcgcaa
     5281 aaacaactat agcaaagggt gcaggagagc ttgaaggcag tcataaaagc catggcgcac
     5341 ctttgggtga agaagtgatt aaaaaagcca aagaacaagc aggctttgat ccaaatatca
     5401 gttttcatat cccacaagca agcaaaatcc gctttgaaag tgctgtagaa cttggggatt
     5461 tagaagaagc aaaatggaaa gataagcttg aaaaaagtgc taaaaaagaa cttttagaaa
     5521 ggctattaaa tcctgatttt aacaagatag cttatcctga ttttaaagga aaagatcttg
     5581 ctacaagaga tagtaatggt gaaattttaa atgttttagc taaaaattta gaaggatttt
     5641 taggtggaag tgcagactta ggcccttcga ataaaacaga acttcacagt atgggagact
     5701 ttgtagaagg taaaaatatc cattttggta tcagagaaca cgctatggca gcgattaaca
     5761 atgcttttgc aagatatgga attttcttac cattttcggc aacttttttc atctttagcg
     5821 agtacttaaa acctgccgca agaatagcag ctctaatgaa aatcaaacat tttttcattt
     5881 tcacacacga tagcataggc gtgggcgaag atggaccaac acaccaacct atagaacaac
     5941 ttagcacttt tagagctatg ccaaattttt taacctttag acctgctgat ggggtggaaa
     6001 atgtcaaagc ttggcaaata gccctaaatg ctgatattcc gagtgctttt gtgctttcac
     6061 gccaaaaact caaagctcta aatgaacctg tttttggaga tgtaaaaaac ggagcgtatt
     6121 tactcaaaga aagcaaagag gctaaattta cacttctagc aagtggaagt gaagtttggc
     6181 tttgtctaga aagtgcaaac gaacttgaaa aacaaggttt tgcttgtaat gttgtttcca
     6241 tgccttgttt tgaacttttt gaaaaacaag ataaagctta tcaagaaaga ttgttaaaag
     6301 gtgaagttat aggtgttgaa gcagcacatt ctaatgaact ttataaattt tgccataaag
     6361 tatatggcat agaaagtttt ggagaaagtg gtaaagacaa agatgtgttt gaacgctttg
     6421 gatttagcgt ttcaaagctt gtaaatttta tccttagcaa ataaaatgaa tacaaatttc
     6481 aaatttcaaa ataatactct ttttatcttt ggaatttggg ataaaacaag tatttataag
     6541 ttaaaaataa aagatttttt agctttgatc caaagcaagg aagtgatttt tgattttaaa
     6601 gatctaaaag caatcgatac cgctggagtg agatttttcc ttgctttgga aaatgacctt
     6661 aaaaataaaa atattaaaat caccaaagaa ggcttaaatt cacgctttca aacccttttt
     6721 gaactttgtg aaaaaaacta ccaaagacta ggcaaaacaa aaaaatcaca tcaaaatttc
     6781 agtgaatact ttatcgatct tggaaaatta agtttagaac ttttaaaaat tttaagaaaa
     6841 ttcatcaatt tcacaggagc ttttttcaca agtctttttt tatgcctcaa aaatcctaaa
     6901 aattttcgct ttattgcttt tttatatcat atagaaaatt ctgcttttaa agccttacct
     6961 atagttattt taaccgctct tttagtagga gtggttttag cctatcaggc tgcttaccaa
     7021 ctcgcacaat ttggagccaa tattttcata gtggatttga tgggaatttc agccactaga
     7081 gaacttgcac ctttaatcgc tgccatagtg atcgcaggaa gaagtgcaag ctcttatacc
     7141 gcacaaattg gggtgatgaa aattactgat gaaattgcag ctatgaatac tatgggtttt
     7201 cgttcttttg aatttattgt tattccacgt gtcatggctt tggtagtagc tatgccttta
     7261 atcgttgcca ttagcgatgc aatcagtatt ataggtggaa tgatggttgc aaaattaaat
     7321 cttgatattt cttttgccga atttttaaga cgctttagag aagctgtaga tataaaacat
     7381 atctttatag gacttgcaaa agcacctatt tttggatttt tgataggact tattgcttgt
     7441 tttcgtggtt ttgaggtaaa aaacactaca caaagtatag gaatttatac aacaaaaagc
     7501 gttgtaaatg ctattttttg ggtgatagct tttgatgctt tattctctgt tattttaact
     7561 tctacaggaa tttaaatggt tattaaagca caaaatatca ttacaaaatt tggagaaaaa
     7621 attgtccatg atggcgtaag ttttgaaatc aaaaaaaacg aaatttttgg tattttagga
     7681 ggtagtggaa gtggaaaatc cgtcctttta aaacaaatgc ttatgcttga acattttgat
     7741 gatggagaat atgaaatttt aggctataaa cttaaaaata tcaacgaaga agatgcactt
     7801 gctttgcgta aaaaatgggg tgtggttttt cagtttgctg cactttttag cttttttaat
     7861 gtttatgaaa atatcgctat tcctttaaaa gaatacactc atttagatga aaatagcata
     7921 caagaactgg ttttaatgaa gctaaaaatg gtaggcttaa acgaaagtgt tttaaaacaa
     7981 tttccaagcg aacttagtgg cggtatgcaa aaaagagtgg caattgctag agctttagca
     8041 cttgatagta aattgctttt tttagatgaa cctacttcag gacttgaccc tcatagtagt
     8101 cgtgaatttg acgatttggt tttagagtta aaaaaaagtt ttgatctaaa tatcattttg
     8161 gttacacatg ataaagaaag tatgaaaaat ttactcgatc gttttatcat tttagaaaat
     8221 aaaaaagttg gattttgcgg cacttatgaa gaattacgct tgcaaaatga acgacttttt
     8281 aaaagattta tggagtaaaa gtggaaaata gagcaaatta tttttttgta ggactttttg
     8341 tttttggagt attttttgca agccttggtt tcatactttg gcttggtgga tactctaaag
     8401 aagaaagttt taagtattat gaaattcaca cacaagaatc cgttgcagga cttggcataa
     8461 aagcacccgt aaggcttttg ggcgtggaag taggtagcgt agaagaaatc agcatttaca
     8521 atcaagatga actcggcgtt aacatacgca tcaaggtcaa aaacaatacc cctataaaag
     8581 aagatacttt tgctactttg caacttcaag gtatcacagg acttaaattt atccaacttc
     8641 aaggcggaag taaaaatagt aaagatctag tatctatgca gggaaaactt ccagtcattc
     8701 cttttaaaga aagtttttta gcgaccatag acagacaaag tgaacatatt ttttctttgg
     8761 ttaaaacggc cgatgataaa tcaaaagaac ttttaagcga aaaaaatctt aaaaatctag
     8821 aaatcctttt gcaaaatcta gcagaattaa gtgcaaattt aaacgctaat tctaaaaatt
     8881 taagtcttaa tctttcaaac gcaagtttaa aaataggaaa aatggctgat aatataagcc
     8941 ttagtgcgca aaatttcaac tccagtctta aaaacataaa agaaagcaca atgattttaa
     9001 aaaatttcat aaaaaaagct gatgaaaaat taaacactta tgatgatatt aaagcatctt
     9061 tgatgcaaaa tttagaactt tttaaacggg ttttaattga aagcaatatt ctaatagaaa
     9121 atttacaaaa cagccctgct gatttgattt ttaaagaaac taaacctaaa cttggaccag
     9181 gagaaaaata atgctaaagc aattattctg tattttgact tttattttta tgttatgcgg
     9241 atgctcttta agacacgaaa ccatcaataa aaatgaaaat atcatattaa aagacgaagg
     9301 aatagactca aatatttttt ttaaaaaaac tggtaaaatt cttaaaattc gcaatgcaaa
     9361 tgcacctttg tatttaaact caagagctat tgtttatata gataatggtt ttagcaacaa
     9421 atacgcacat tatttctggg gagatttacc aagcaatctt tattcttttt taattttatc
     9481 aaaatttgaa caaagcaata tttttacaac cttactttct tcaacaagct ctttaagtgc
     9541 ggattattct cttgaaagca ggattaactc ttttgagcaa attcttaata acaatgaaaa
     9601 ctacgctcaa atttctataa gcgtaaattt cataaatctt gaaaacaatc aaataatagc
     9661 tcataaaatt ttcaatacca aagaaaaaat agaaaaaaaa gatatccgct ctacctataa
     9721 tgcttttcaa aaagccttga ataaaattgg caatgagatt gttttttggg taaattctaa
     9781 cttatcctaa tttaggaaca ctttttgctt tttaaatatt tagcaatatt tttgaaaggt
     9841 aaacaatgaa aagtgattta gatatattta aaaaacactt aggtgaaatt cagggcgtga
     9901 atgaatttaa agcaaatcaa atttgctctc aaatcaatga tgcaaatgat tttataggag
     9961 cacttcaagt gcttgatatg tctttaaaaa aaatagaaaa aagcattcta gaaagaatag
    10021 atgaaaattc agatgatatg caaaaaagaa ctcttgatgc cacagcgtca caacttatac
    10081 aaaactgctc tttcatggga acagctcttt ttggaaatat tttcaatgtt tatgttggta
    10141 aaaaactttt tgaatttgaa attgctaatc cacttttaat tcttcaaaca agtaattacg
    10201 aaggtgtatt ggcctatata caagataaaa gagatgaaat aaaaatcatt ctatcagaat
    10261 tatcaaccgc aattaccatg ggcgaaacta tggataatgc tggaatttat aactctacaa
    10321 tggattttaa aaatttattt aaataagaat agtaatcgtt tgttctcttt aagcaaatat
    10381 aatatatttt agcttaaaga gattttccaa actctaaaag agagttaggc tacgaataaa
    10441 aagggggagg gaaatagcct aacccaaacg agatcttaaa agatctcttt aaactaaaat
    10501 aaatatttag ataatttaac aatttttatt aaattatcta aaccatattt atgttttagt
    10561 ttaatacgat gtgacatttt attctaaaaa cacttaatct gctataaaat a
//
LOCUS       DAPIYB010000061        10484 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.062, whole genome shotgun sequence.
ACCESSION   DAPIYB010000061 DAPIYB010000000
VERSION     DAPIYB010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10484
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.062"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(9..392)
                     /gene="queF"
                     /locus_tag="RJ318_001267"
     CDS             complement(9..392)
                     /gene="queF"
                     /locus_tag="RJ318_001267"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDV7431130.1"
                     /translation="MRYGEKEIKEFDVENMEIWPNDAKNDYIIKITLPEFMCCCPRSG
                     YPDFATIYLEYMPDKFVVELKAIKLYINTFMYRNVSHEASINEIYNTLKDKLKPKWIK
                     VVGDFNPRGNVHTVIECRSDMVVPK"
     gene            complement(637..3201)
                     /gene="flgE"
                     /locus_tag="RJ318_001268"
     CDS             complement(637..3201)
                     /gene="flgE"
                     /locus_tag="RJ318_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDV7431131.1"
                     /translation="MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTM
                     FSQTVKIATAPTDGRGGSNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFF
                     MVSDDGGLTRYLTRSGDFKLDAYGNFVNNAGFVVQGWNINWDTQSIDSSRTPQNIFID
                     PGMHIPAAKSTEVAIKANLNSGLNIGTASRPIYGLDSIHGFNKKTGETKDENDTGTTQ
                     FYTTSKNAVEVTEKGVDAGALFNANGTGLNLREGQGIWVSYADAKFSTAGAGAGAGAN
                     QGNNGVFDPNQKVNQNPVIFWGHEQKPTTLDITLNGVHIQNTSIKSLDEAIAYINTFT
                     APTDTRDGTGVRAVKKADGSGIDFINDNADGTTDNMKNIDLQVNANNSAGELINIRVA
                     GNPADFDWNNINLRPAGNPIIRGNGSAWIAGTAAQNQDRIQIVTAHKYIYSSTPQTLP
                     PLYNPDGGHTWNQANINTPGTPENNYQLAMNGSFLTTTPRVFRTTEDLRELLQRDARY
                     GVDYDGSGGFEVTGQDVNEGVSVVITENGNFSIANPNVASNPPAGINNPNRTTHNINF
                     NVTAYSNKQGTVSTNDAFTKIFKAFDGVLTVGGQIKESEQLKLSAFSAGLEIYDSLGS
                     KHTLEVQFVKQSTTQDGGNEWQMIIRVPEPAEINTTGEGPNNIVVGTARFNNDGSLAS
                     YNPKTLNFSPNNGAAPNQQIKLSFGTSGSNDGLVSSNSASTLTGQATDGYTSGNLKPD
                     AIRVDDKGNILGEFTNGKTFAVAKMAMASVANNSGLEEIGGNLFKVTANSGAIVVGEA
                     GTGGRGEMKTSALEMSNVDLSRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ"
     gene            complement(3405..3887)
                     /gene="ruvC"
                     /locus_tag="RJ318_001269"
     CDS             complement(3405..3887)
                     /gene="ruvC"
                     /locus_tag="RJ318_001269"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDV7431132.1"
                     /translation="MNLKILGIDPGSRNCGYAIIEANKGKNILIEAGLIKIKPSTLQY
                     QITELCEGLDLIFKNHSFDEVAIEDIFFAYNPKTVLKLAQFRGALSLKILQIHGDFAE
                     YTPLQVKKAVTGKAKATKEQVAFMVKRLLGLSKDIKPLDITDAIAVALTHAANLRVRV
                     "
     gene            3983..5305
                     /gene="dnaA"
                     /locus_tag="RJ318_001270"
     CDS             3983..5305
                     /gene="dnaA"
                     /locus_tag="RJ318_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDV7431133.1"
                     /translation="MNPSQILENLKKELNENEYENYLSNLKFNEKQSKADLLVFNAPN
                     ELMAKFIQTKYGKKIAHFYEVQSGNKAIINIQAQSAKQSNKSTKIDIAHIKAQSTILN
                     PSFTFDSFVVGDSNKYAYGACKAITHKDKLGKLYNPIFVYGPTGLGKTHLLQAVGNAS
                     LEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEE
                     FFFIFNEIKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIR
                     KKCEFNDINLSNDIINYIATSLGDNIREIEGIIISLNAYATILGQEITLELAKSVMKD
                     HIKEKKENITIDDILSLVCKEFNIKPSDVKSNKKTQNIVTARRIVIYLARALTALTMP
                     QLANYFEMKDHTAISHNVKKITEMIENDGSLKAKIEELKNKILVKSQS"
     gene            5465..6532
                     /locus_tag="RJ318_001271"
     CDS             5465..6532
                     /locus_tag="RJ318_001271"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDV7431134.1"
                     /translation="MKLSINKNTLESAVILCNAYVEKKDSSTITSHLFFHADEDKLLI
                     RASDYEIGINYKIKKIRVESSGFATANAKSIADVIKSLNNEEVVLETIDNFLFIRQKS
                     TKYKLPMFNHEDFPNFPNTEGKNQFDIDSSDLSRSLKKILPSIDTNNPKYSLNGAFLD
                     IKTDKINFVGTDTKRLAIYTLEKANNQEFSFSIPKKAIMEMQKLFYEKIEIFYDQNML
                     IAKNENFEFFTKLINDKFPDYEKVIPKTFKQELSFSTEDFIDSLKKISVVTEKMKLHF
                     NKDKIIFEGISLDNMEAKTELEIQTGVSEEFNLTIKIKHLLDFLTSIEEEKFTLSVNE
                     PNSAFIVKSQGLSMIIMPMIL"
     gene            6561..8870
                     /gene="gyrB"
                     /locus_tag="RJ318_001272"
     CDS             6561..8870
                     /gene="gyrB"
                     /locus_tag="RJ318_001272"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDV7431135.1"
                     /translation="MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVD
                     NSIDEAMAGHCDTIDVEITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGK
                     FDKDTYKVSGGLHGVGVSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGVIGKSK
                     KTGTTIEFWPDDQIFEVTEFDYEILAKRFRELAYLNPKITINFKDNRVGKHESFHFEG
                     GISQFVTDLNKKEALTKAIFFSVDEEDVNVEVALLYNDTYSENLLSFVNNIKTPDGGT
                     HEAGFRMGLTRVISNYIEANASAREKDNKITGDDVREGLIAIVSVKVPEPQFEGQTKG
                     KLGSTYVRPIVSKASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKE
                     SLSVGTLPGKLADCQSKDPSESEIYLVEGDSAGGSAKQGRERSFQAILPLRGKILNVE
                     KARLDKILKSEQIQNMITAFGCGIGEDFDLSKLRYHKIIIMTDADVDGSHIQTLLLTF
                     FFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKDEKALSEYLIETGIEGLNYEGIGM
                     NDLKDYLKIVAAYRAILKDLEKRFNVISVIRYMIENSNLVKGNNEELFSVIKQFLETQ
                     GHNILNHYINENEIRAFVQTQNGLEELVINEELFTHPLYEEASYIFDKIKDRSLEFDK
                     DILEVLEDVETNAKKGATIQRYKGLGEMNPEQLWETTMDPSVRRLLKITIEDAQSAND
                     TFNLFMGDEVEPRRDYIQAHAKDVKHLDV"
     gene            complement(8898..9239)
                     /locus_tag="RJ318_001273"
     CDS             complement(8898..9239)
                     /locus_tag="RJ318_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monoheme cytochrome C"
                     /protein_id="HDV7431136.1"
                     /translation="MKKIILILALFLSASWAQNLEINPDTGLIIDPDSPLVEANCLAC
                     HGSNLITNMHASRKAWLAAIRWMQDSEGLWEIEPEDEEKILNYLEKYYGEKYDTRRRI
                     PLAILLQNKTH"
     gene            complement(9242..10480)
                     /locus_tag="RJ318_001274"
     CDS             complement(9242..10480)
                     /locus_tag="RJ318_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HDV7431137.1"
                     /translation="MKQNDQKENRRDFLKNIGLGLFGISVLSNFSFENFLGSKALAKE
                     LPDFKIEGKKDLIYHGEKPLTAETEIYALDSDFTKPENFFVRNNGLPPSLETIKERLH
                     KGWTLEIDGESIINKKSYTIEDLKKKFKTYTYALTVECGGNGRSEVIPSTKGTQWGYG
                     AVACGRWTGVRLKDILKDCGIKNDAVYIGYYGIDTKLNGEETSPISRGVPISKALQDE
                     TLIAWAYEGKDIPLVNGYPLRLVCGGYPASTSGKWLYKISVRNKIHDGEKMEGSYKVP
                     VNPVKPGDFNYKGEMKIIESMPIRSVITNIKNGSEIKANKKFEVRGKAWAGELEVSEV
                     YVSNDYGVTWTKAKVEKPLNRLAWQKWSAQISIPTKGYYEIWARAIDSQGNSQPMVLA
                     QWNPGGYINNACHRVNVYGV"
BASE COUNT         3654 a         1747 c         1646 g         3437 t
ORIGIN      
        1 cttaaatatt attttggcac taccatatcg ctacgacatt ctatcaccgt atgcacattt
       61 ccacgcgggt taaaatcccc cacaacttta atccattttg gttttaattt atcttttaaa
      121 gtattataaa tttcattgat acttgcttca tgtgaaacat ttctatacat aaaagtattg
      181 atataaagtt ttatcgcctt aagctcaacc acaaatttat caggcatata ctcaagataa
      241 atcgtcgcaa agtcaggata acccgaacgc ggacaacaac acataaattc aggtaaagtg
      301 attttaatga tatagtcatt tttagcatca tttggccaaa tttccatatt ttctacatca
      361 aattctttga tttccttttc accataacgc ataaatttcc ttaaatttaa attcgagcaa
      421 aaattataac aaaataagtt tttaaaacga ttataataca gataagaaaa tgcaatttta
      481 ttgcaactca cccctagcaa gagtgagtta gcaataaatt gaaggcagtt caagcctaag
      541 cctagtatta caagactacc aagataggct tgtaaagcaa ggcttgctcc cttaaaggga
      601 gcaaaaaaca atattttata gaatactaag cttaaattat tgtttaagct ggattagagt
      661 ttgaagcatt tgatcactcg ttgaaatggt ttttgaattt gcttgataac ctctttgaat
      721 gataataagc tctgttaaag aacgacttaa atccacattt gacatttcaa gagctgaggt
      781 tttcatctca ccacgacctc ctgttcctgc ttcacctact actatagccc cactatttgc
      841 agtgacttta aaaagatttc cgccgatttc ttcaagacct gagttatttg ccactgaagc
      901 catcgccatt tttgcaacag cgaaggtttt accattggta aattcgccta agatattacc
      961 tttgtcatcc acacggatag catcaggttt taagttacct gaagtataac catcagttgc
     1021 ttgtcctgtt agagttgaag ctgagtttga gcttacaagg ccgtcattgc ttccacttgt
     1081 tccaaaggaa agtttgattt gttgatttgg tgcggcaccg ttattgggtg aaaaatttaa
     1141 agttttagga ttgtaactag ctaaagagcc atcgttgtta aatcttgctg ttcctacgac
     1201 gatattgttt ggtccttcac ctgtagtgtt aatctctgca ggttctggca cacggatgat
     1261 catctgccat tcattacccc catcttgagt ggtactttgc ttgacaaact gcacttctaa
     1321 agtatgtttt gaacctaaag aatcataaat ttcaagcccc gccgaaaaag cagaaagctt
     1381 aagttgctca ctttctttga tctgacctcc gactgttaaa actccatcaa aagctttaaa
     1441 aattttagta aaggcatcat tggtacttac agttccttgt ttattactat aggctgttac
     1501 attaaaattt atattatgtg ttgttctatt tggattatta ataccagctg gtggattact
     1561 tgcaacatta ggatttgcta tagaaaaatt tccattttct gtaataacaa cacttacacc
     1621 ttcatttaca tcttgacctg taacttcaaa tccaccgctt ccatcataat ccaccccata
     1681 tctagcatct ctttgtaaaa gctctcttaa gtcctctgta gttctaaaaa cccttggtgt
     1741 tgtagttaaa aatgaaccat tcatagctaa ttgataatta ttttcaggag taccaggagt
     1801 atttatattt gcctgattcc aagtgtgtcc accatcagga ttatacaaag gtggtaaagt
     1861 ttgaggagta gagctataaa tatatttatg agctgttact atttgtattc tatcttgatt
     1921 ttgagcagca gttcctgcta tccaagcact accattacca cgtattatag gattaccagc
     1981 gggtcttaaa ttgatattat tccaatcaaa atctgcggga ttaccagcaa cccttatatt
     2041 aataagttct ccagctgaat tattagcatt aacctgtaaa tctatatttt tcatgttatc
     2101 tgtagtgcca tcagcattgt cattgataaa atcaatccca ctaccatctg ctttttttac
     2161 tgctcttacc cctgttccat ctcttgtatc tgttggtgcg gtgaaagtat tgatataagc
     2221 tatagcttca tctaagcttt ttatagaagt attctgtata tgaactccat ttagagtaat
     2281 atccaaagtt gtaggttttt gctcatgtcc ccaaaatata acaggatttt gatttacttt
     2341 ttgattagga tcaaaaacac cattattacc ttgatttgct ccagctccag ctccagctcc
     2401 agctgtacta aacttagcat ctgcataaga tacccaaatt ccttgacctt ctcttaaatt
     2461 taaacctgta ccattagcat taaataaagc tccagcatca acgccttttt cagttacttc
     2521 tacagcattc ttagaagtcg tataaaactg agtggttcct gtatcatttt catctttagt
     2581 ttcacctgtt tttttattaa aaccatgtat agaatcaagt ccatatatag gacgacttgc
     2641 tgttcctata tttaaaccac tatttaaatt cgctttgatg gctacttcgg ttgattttgc
     2701 tgcagggata tgcatacctg gatcgataaa aatgttttgt ggagttcttg agctatctat
     2761 actttgagta tcccagttga tattccaccc ttgaactaca aaaccggcat tgtttacaaa
     2821 attcccataa gcatcgagtt taaaatcccc gctccttgta agatagcgag taagcccccc
     2881 atcatcactc accataaaaa aaccatcacc atttatagca acgtcagtgt ttttatctgt
     2941 ggtttgaact gaaccttgag aatgaattct agttgtagaa cttactgaaa cgccaagacc
     3001 gatttgaagt ggattagatc cacctcttcc atcagttgga gctgtagcga ttttcacagt
     3061 ttggctaaac atagtcccaa aatctgcacg ggagtattta aaaccagtgg tattaacatt
     3121 tgaaatgtta ttaccttcaa catccatcgc aacttgatgt gcttgtagtc cgcttacgcc
     3181 agaccaaagt gatctcatca tcttaaatcc tttataaaat attgctttaa aaaatttaac
     3241 gctttggctt taaaaaactt ttgcgtttat gtgaagttta caagcaagtt ctgttccaac
     3301 ttttgaaatt ttttatgaat tttttaaaaa tttatagaaa aaatttaaag gtattttggg
     3361 agtttatgaa gctttgggct tttgtgtaat aaaaattacc aaaatcacac cctaactctt
     3421 aaatttgccg catgagttaa agccactgcg atagcatctg tgatgtctaa aggcttgata
     3481 tctttactaa gtcctaaaag cctttttacc ataaaagcaa cttgttcttt agttgctttg
     3541 gcttttcctg taacggcttt ttttacttgt aagggagtgt attctgcaaa gtctccatga
     3601 atttgaagaa tttttaaaga tagggctccg cgaaattgtg cgagttttaa aacggttttt
     3661 ggattgtaag caaaaaagat atcttctata gccacctcat caaaagaatg atttttaaaa
     3721 atcaagtcca aaccctcaca aagctctgtg atttgatact gtaaggtgct tggctttatc
     3781 tttataagtc ctgcttctat gagaatgttt tttcctttgt tggcttctat gatagcataa
     3841 ccacaatttc tcgaacctgg atctatacct aaaattttca aattcatacc ttttgaaaaa
     3901 taaaatacga aagcggattt taaccttttt ttataaaatt taagataaaa tttatacatt
     3961 atgcaaaatt taaagagaga ttatgaatcc aagccaaata cttgaaaatt taaaaaaaga
     4021 attaaacgaa aacgaatacg aaaactattt atcaaattta aaattcaacg aaaaacaaag
     4081 caaagcagat cttttagttt ttaacgctcc aaatgaactc atggctaaat tcatacaaac
     4141 aaaatacggt aaaaaaatcg cacattttta tgaagtgcaa agtggaaata aagccatcat
     4201 aaatatacaa gcacaaagtg ctaaacaaag taacaaaagc acaaaaatcg acatagctca
     4261 tataaaagca caaagcacaa ttttaaatcc ttcttttact tttgacagtt ttgttgtggg
     4321 ggattctaac aaatacgctt atggagcatg taaagctata acacataaag acaagcttgg
     4381 aaaactttat aatcctatct ttgtttatgg gcctacagga cttggaaaaa cacatttact
     4441 tcaagcggtt ggaaatgcaa gcttagaaat gggaaaaaaa gttatttacg ctaccagtga
     4501 aaattttatc aatgatttta cttcaaattt aaaaaatggc tctttagata aatttcatga
     4561 aaaatataga aactgcgatg ttttacttat agatgatgtg cagtttttag gaaaaaccga
     4621 taaaattcaa gaagaatttt tctttatatt taatgaaatc aaaaataacg atggacaaat
     4681 catcatgact tcagacaatc cacccaacat gctaaaaggt ataaccgaac gcttaaaaag
     4741 tcgttttgca catgggatca tagctgatat aactccacct caactagata caaaaatagc
     4801 catcataaga aaaaaatgtg aatttaacga tatcaatctt tctaatgata tcataaacta
     4861 tatcgccact tctttagggg ataatataag agaaatcgaa ggtatcatca taagtttaaa
     4921 tgcttatgca accatactag gacaagaaat cacactcgaa cttgccaaaa gtgtgatgaa
     4981 agatcatatc aaagaaaaga aagaaaatat cactatagat gacattttat ctttggtatg
     5041 taaagaattt aacatcaaac caagcgatgt gaaatccaat aaaaaaactc aaaatatagt
     5101 cacagcaaga cgcattgtga tttacctagc tagggcactt acggctttga ctatgccaca
     5161 acttgcgaat tattttgaaa tgaaagatca tacagctatt tcacataatg ttaaaaaaat
     5221 cacagaaatg atagaaaatg atggttcttt aaaagcaaaa atcgaagaac ttaaaaacaa
     5281 aattcttgtt aaaagtcaaa gttaagtgaa aggatgtgaa aaataaattc tagagtgtga
     5341 aaaaaagaaa ttaagcaaag tatgataaaa tacaaatttg attattttgc tttgaagaat
     5401 ttcacaattt caacaagctt attattacaa cgaatttaaa attaaaataa accaaggaga
     5461 aaaaatgaag ttaagtatca ataaaaatac tttagaatct gcagtgattt tatgtaatgc
     5521 ttatgtagaa aaaaaagact caagcaccat tacttctcat cttttttttc atgctgatga
     5581 agataaactt cttattagag ctagtgatta tgaaataggt atcaactata agataaaaaa
     5641 aatccgcgta gaatcaagtg gctttgctac tgcaaacgca aaaagtattg cagatgttat
     5701 taaaagctta aacaatgaag aagttgtttt agaaaccatt gataattttt tatttataag
     5761 acaaaaaagc acaaaataca aacttcctat gtttaatcat gaagattttc caaattttcc
     5821 aaatacagaa ggaaaaaacc aatttgacat tgattcaagt gacttaagtc gttctcttaa
     5881 aaagatatta ccaagtattg atacaaacaa cccaaaatac tccttaaatg gtgcattttt
     5941 agatataaaa acagataaaa ttaacttcgt aggaactgat acaaaacgcc ttgcaatcta
     6001 tactttagaa aaagcaaata atcaagaatt tagttttagt atccctaaaa aagctattat
     6061 ggaaatgcaa aaacttttct atgaaaaaat agaaattttt tatgatcaaa atatgcttat
     6121 tgctaaaaat gaaaactttg aattctttac aaaacttatt aacgataaat ttccagatta
     6181 tgaaaaagtt ataccaaaaa ctttcaaaca agaactcagc ttttcaactg aagattttat
     6241 agatagtctt aaaaaaatca gcgttgtaac tgaaaaaatg aaacttcatt ttaacaaaga
     6301 taaaatcatc tttgaaggta taagtttaga caatatggaa gcaaaaacag aacttgaaat
     6361 tcaaacagga gtaagtgaag aatttaatct tactataaaa atcaaacatt tacttgattt
     6421 cttaacttct atagaagaag aaaaattcac tttaagtgta aatgaaccta attcagcatt
     6481 tatagtcaaa tcccaaggac tatcaatgat tatcatgcct atgattttgt aataaaacaa
     6541 gtaaaagata aaggaaaaat atgcaagaaa attacggtgc gagtaatatt aaagtcctaa
     6601 aaggcttaga agctgttaga aaacgcccag gtatgtatat aggagataca aacataggcg
     6661 gacttcatca tatgatttat gaagttgtgg ataattctat cgatgaagct atggcaggac
     6721 attgcgatac tatagatgta gaaatcacta ctgaaggaag ctgtatagtt agtgataatg
     6781 gtcgtggtat tcctgttgat atgcacccaa ctgaaaatat gccaacttta actgttgttt
     6841 taactgtcct acatgcaggg ggaaaattcg ataaagatac ttataaagtt tcaggcggtt
     6901 tgcacggtgt tggggtttcg gttgtaaatg cactctctaa aaaacttgta gctacagttg
     6961 aaagaaatgg agaaatttat cgtcaagaat tttcagaagg taaagttatc agtgaatttg
     7021 gtgtgatagg aaaaagtaaa aaaacaggaa caactataga attttggcct gatgatcaaa
     7081 tttttgaagt gactgaattt gattatgaaa ttttggctaa aagatttcgt gaacttgcat
     7141 acttaaatcc aaaaatcact ataaatttta aagataaccg cgtaggcaaa catgaaagtt
     7201 ttcactttga aggtggaatt tctcagtttg ttacagactt aaataaaaaa gaagctttaa
     7261 ctaaagcaat tttctttagt gtagatgaag aagatgtgaa tgttgaagta gctttgcttt
     7321 acaatgatac ttatagtgaa aatttactct cttttgtaaa taatattaaa accccagatg
     7381 gtggaacaca cgaagctggt tttagaatgg gtttaactcg tgtgataagt aactatatag
     7441 aagcaaatgc aagtgctaga gaaaaggata ataaaatcac gggtgatgat gtgcgtgaag
     7501 gtttgatcgc tattgtgagt gtaaaggtac ctgaaccaca atttgaagga caaaccaaag
     7561 gaaaacttgg ttcaacttat gtgcgtccta tagtttcaaa agcaagtttt gagtatttga
     7621 ctaaatattt tgaagaaaat cctatcgaag ctaaagctat aatgaataaa gctttaatgg
     7681 cagctagagg aagagaagca gcgaaaaaag ctagagaatt aacgcgcaaa aaagaaagtt
     7741 taagcgtagg aactttacca gggaaattag ctgattgtca aagtaaagat ccaagtgaaa
     7801 gtgaaattta tcttgtggaa ggggattctg caggaggttc tgcaaaacaa ggtagagaaa
     7861 gatctttcca agctatactg cctttgcgtg gtaaaatttt aaatgttgaa aaagcaagac
     7921 tagataaaat tttaaaatct gagcaaattc aaaatatgat taccgctttt ggctgtggta
     7981 taggtgaaga ttttgatctt tcaaaactta gatatcataa aatcatcatc atgacagatg
     8041 cggatgttga tggatctcat atacaaacct tgcttttaac tttcttcttc cgttttatga
     8101 atgaacttgt ggcaaatgga catatttatc tagcacaacc acctttatat ctttataaaa
     8161 aagctaaaaa gcaaatttat ttaaaagatg aaaaagcttt gagcgaatac ctgatagaaa
     8221 cgggaataga aggtttaaac tatgaaggta taggaatgaa tgatttaaaa gattatttaa
     8281 aaatcgttgc agcttatcgt gcgattttaa aagatcttga aaagcgtttt aatgtgattt
     8341 ctgtgatacg ctatatgata gaaaattcaa atttagttaa aggaaataat gaagaattat
     8401 ttagtgtaat caaacaattt ttagaaacac aaggacacaa tatcttaaat cattatatca
     8461 acgaaaatga aattcgagct ttcgttcaaa ctcaaaatgg cttagaagaa cttgtgatca
     8521 atgaagaact tttcactcat ccactatatg aagaagcgag ttatattttt gataagatta
     8581 aagatagaag cttggaattt gataaagata ttttagaagt tcttgaagat gttgaaacca
     8641 atgctaaaaa aggtgctact atacaacgct ataaaggttt aggggaaatg aatcctgagc
     8701 aactttggga aaccacaatg gatccaagcg taagaagact tttaaaaatc actattgaag
     8761 atgcacaaag tgcaaatgat acctttaatc tctttatggg tgatgaggtt gaaccaagac
     8821 gcgattatat ccaagcgcac gctaaagatg taaagcattt ggatgtgtaa aaatttatca
     8881 ttgaagaaat gatttcttca atgagttttg ttttgtaaga gtatagctag aggaattctt
     8941 cttcttgtat cgtatttttc tccataatat ttttcaagat aatttaaaat tttttcttca
     9001 tcttcaggtt ctatttccca aagtccttca ctatcttgca tccatcttat agctgctaac
     9061 caagcttttc tacttgcatg catattggta atgagattgg atccatgaca agctaaacaa
     9121 tttgcttcca ctaaaggtga atcaggatcg ataatcaatc ctgtatcagg gttaatttca
     9181 agattttgag cccaacttgc acttaaaaac aatgctaaga tcaatataat ttttttcata
     9241 cttaaactcc ataaacatta actctatggc atgcattatt gatatatcct cctggattcc
     9301 actgtgctaa aaccataggt tgactgttac cttgactatc gatagctctt gcccaaattt
     9361 cataatatcc ttttgttggt attgatattt gagcactcca tttttgccat gctaatctat
     9421 ttaatggttt ttctaccttt gctttagtcc atgttacgcc ataatcattg cttacataaa
     9481 cttcactaac ttcaagttct ccagcccaag ctttacctct aacttcaaat tttttatttg
     9541 cttttatttc agaaccattt ttgatattag taattacaga tcttataggc attgattcta
     9601 tgattttcat ctcgccttta tagttaaaat ctcctggttt taccggattt acaggaactt
     9661 tataagaacc ttccattttt tcaccatcat gaattttatt tcttactgaa attttataaa
     9721 gccatttacc gcttgtactt gcagggtaac caccacaaac aagtctaagt ggatagccat
     9781 tgactaaagg aatatctttg ccttcataag cccaagctat tagagtttca tcttgtaaag
     9841 ctttagaaat aggaactcct ctactaatag gtgaagtttc ttcaccattt aattttgtat
     9901 ctatgccata atatccgata taaaccgcat catttttgat gccacaatct tttaaaatat
     9961 cttttaaacg cactcctgtc catctaccgc aagctactgc accataaccc cattgagttc
    10021 cttttgtgct aggtataact tcggatctac catttccacc gcattcaact gttaaggcat
    10081 aagtataggt tttaaatttc ttttttaaat cttctatggt gtaagatttt ttattgataa
    10141 tgctttctcc atcgatttct aaagtccaac ctttatgaag tctttctttt atcgtttcta
    10201 ggcttggtgg taagccatta tttctaacaa agaaattttc aggtttagta aaatcagaat
    10261 caagagcata aatttcagtt tctgctgtta atggtttttc gccatggtag ataagatctt
    10321 ttttaccttc tattttaaaa tcaggcaatt cttttgccaa agccttactt cctaaaaaat
    10381 tctcaaaaga aaaatttgac aatacactaa tgccaaataa accaagtcct atatttttta
    10441 gaaagtctct acgattttct ttttgatcgt tctgtttcat tgaa
//
LOCUS       DAPIYB010000062        10413 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.063, whole genome shotgun sequence.
ACCESSION   DAPIYB010000062 DAPIYB010000000
VERSION     DAPIYB010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10413
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.063"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(136..693)
                     /locus_tag="RJ318_001275"
     CDS             complement(136..693)
                     /locus_tag="RJ318_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HDV7431138.1"
                     /translation="MKYQLRFGGEGGQGVITAGEILAEAAIKEGRQAFKASTYTSQVR
                     GGPTKVDIIIDDKEILFPYAVEGEVDFMLSTADKGYKGFRGGVKEGGIIVVEPNLVHP
                     ESEDYKKWQIFEIPIITIAKDEVGNVATQSVVALAIAAYMSKCIDLDVLKETMLHMVP
                     AKTRDANAKAFDLGVKYATQAKPYS"
     gene            complement(690..1535)
                     /locus_tag="RJ318_001276"
     CDS             complement(690..1535)
                     /locus_tag="RJ318_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HDV7431139.1"
                     /translation="MAFNYDEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDD
                     VCLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIG
                     GNHTIHGCRRNIDLTHIVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACEL
                     TKAAGASFVARGNVIEANKLENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAM
                     LDWIKNRVVDKAKFESMDFEERKDKFPTGILHEDNSQPEYCHAYEEVRRAAKEKRMVD
                     LGALK"
     gene            complement(1536..2660)
                     /locus_tag="RJ318_001277"
     CDS             complement(1536..2660)
                     /locus_tag="RJ318_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate synthase subunit alpha"
                     /protein_id="HDV7431140.1"
                     /translation="MREVIATGNVLIAKAAIDCGCKFFGGYPITPSSEIAHELSHMLP
                     ANDGTFIQMEDEISGISVAIGAAMSGVKSMTASSGPGISLKAEQIGLAFIAEIPLVIV
                     NVMRGGPSTGLPTRVAQGDLFQAKAPTHGDFASIAIAPASLEEAYTETIRAFNLAEKY
                     MTPVFLLMDETVGHMNGKAVLPDLKDIKVYNRKKFEGDKKDYKPYAAGENEPATLNPF
                     FTGYRYHVTGLHHGDIGFPTEDGVIVKKNMERLIGKIKNNQEDICTYEEYMLDDAEFL
                     IIAYGSVSRSAKEAIQRLREQGIKVGLFRPITLYPVAEKKIAEVVSKFKKVMVSELNM
                     GQYLEEIERVTSRRDFISLHRANGRPITPSEIIAKVKENI"
     gene            complement(2669..2980)
                     /locus_tag="RJ318_001278"
     CDS             complement(2669..2980)
                     /locus_tag="RJ318_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDV7431141.1"
                     /translation="MSMTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLG
                     QMIEVVHPESCIGCTECETHCPDFAIMVAKRDEFKFAKLTAEAKDRAVAVKNNKYKKL
                     A"
     gene            complement(2995..3864)
                     /gene="sucD"
                     /locus_tag="RJ318_001279"
     CDS             complement(2995..3864)
                     /gene="sucD"
                     /locus_tag="RJ318_001279"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDV7431142.1"
                     /translation="MSILVNKNTKVIVQGFTGKEATFHAEQCMAYGTNIVGGVTPHKG
                     GQTHLGKPVFDTVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPV
                     KDMMFAKQYANKKGMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYE
                     AANQVVQGGYGISTAVGIGGDPIIGLAYKELLSEFQKDDETKAIIMIGEIGGSLEVEA
                     AKFIKENISKPVVAFIAGATAPKGKRMGHAGAIVGSADESAAAKKEALKSYGIHVVDS
                     PALIGEEIQKILG"
     gene            complement(3874..5037)
                     /gene="sucC"
                     /locus_tag="RJ318_001280"
     CDS             complement(3874..5037)
                     /gene="sucC"
                     /locus_tag="RJ318_001280"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDV7431143.1"
                     /translation="MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVANAKELGGSVWA
                     VKAQIHAGGRGLGGGVKIAKNLDEVKDYTSKILGINLVTHQTGPEGKLVQKLYIESGA
                     NIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHG
                     LEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSF
                     DDSALYRHPEIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDII
                     NYSGAKPANFLDVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILE
                     ATKNVEVNIPIVVRLDGTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLVG"
     gene            complement(5038..5940)
                     /locus_tag="RJ318_001281"
     CDS             complement(5038..5940)
                     /locus_tag="RJ318_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDV7431144.1"
                     /translation="MKITVIGAGNVGSSVAYALILREIANEIVLVDINEDLLYAKELE
                     LTQSIAALNLNIDLLCTKDYTHTKNSDIVLFSAGFARKDGQSREELLQLNTSIMLDCA
                     KKIKDFTEDPLFIILTNPVDFLLNTLYESGIFSSKKIIAMAGVLDNARFKYELAKKLN
                     VKMSRVDTRLIGFHNDDMVLVKSYASVKNKNISEFLNEEEFEDLENEVKTGGAKVIKH
                     LKTSAYLAPASACIRMLESIRSGEFLPMSVILHGEFGVQNKALGVMARLGLEGVIEIM
                     KMDLSLQEKDKLEKSLIKYQYKGE"
     gene            complement(5937..8141)
                     /locus_tag="RJ318_001282"
     CDS             complement(5937..8141)
                     /locus_tag="RJ318_001282"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDV7431145.1"
                     /translation="MQITYTLTDESPALATYSFLPIVKAFLSRAHIGVKTSDISLSGR
                     ILATFSEYLKEEQRCEDALELLGELVKRSDANLIKTPNISASIPQLKAAIKELQDKGY
                     MLPNYPDEPKNDEELQIKTKYQKVLGSAVNPVLRQGNSDRRSTKAVKDYAKNNPYRVV
                     EFNPNSKTRVSYMKEGDFFSNEKAVLIDQDCVANIEFTSVDGKKEILKEGLKLEKNEI
                     LDATFMDVQKLQEFYTKEIKASKDDDVLFSLHLKATMMKVSDPILFGYAVKVFFKELF
                     IEFQDEFEKLGINPNNGLSELLSKIENSSKKDEILKKYNEILAKSADISMVNSDKGIT
                     NLHVPSDVIVDASMPAMLKNGARLWDKEGKEKDTNAVIPDQTYATIYEAVIEDLHKNG
                     TLNPSKLGSVSNVGLMAKKAQEYGSHDKTFVAKEEGTFKIVSNGKVLLEHKVRKGDIY
                     RANQAKFDAVLNWIDLGIERSELSGAEAIFWLDSKRASNKIMITLVQNRLKEKGKNVA
                     ILTPKEACLRSLELIREGKDVISITGNVLRDYLTDLFPILELGTSAKMLSVVPMLNGG
                     AMFETGAGGSAPKQVEQLVEENHLRWDSLGEFLALQASLEFYANKCGNHKAKVLAECL
                     DEAIGEWLENNKAPSRKVKEDDNRTSHFYLAMYFANHLARQASDMELQSFFKDIALEL
                     SSNEEKIRAEFNDAQGVKVDLGGYYKFDDEKANKIMRPSATFNAILEKIGQR"
     gene            complement(8258..>10413)
                     /locus_tag="RJ318_001283"
     CDS             complement(8258..>10413)
                     /locus_tag="RJ318_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AsmA-like C-terminal domain-containing protein"
                     /protein_id="HDV7431146.1"
                     /translation="IADIKKLLLKDYDLSIDGNLSINTKSEFYYFQGRASGELLDFNA
                     SISYKDKNLAYKIEDLNIRNITEIFKRVNKRIELPQSLNLWVAYRAKGEFYHLDYLQG
                     FIDFTKDNYYLDNISASGYVNNVKVRLDDKMNAIEIPKLDLNLNKQKLDFVFNKAFYN
                     GADLSSSKVYLYDLFDEKKVGIYLRIKSDNLKFDEKLAKALEDYHFSLPFYQKSGKIK
                     SDLELKIDFHDKGEISYSGILALENASISLADFNITKAFVKLNQNDLNIENASVKNGF
                     LEADFNAKFDLQKQQGNFNTQISRLYFDNGELLDLKNQNVEVKLDYSQNVNISIPQWN
                     LILNFKDGLEANLNNPKILFSFSPLLKKLGFIDAKNVYYKTLNFEDFNASVNDTYFKN
                     NLLINGQTPYENDSFDIVKNKGIMEIHTQSDTASAKISSDNKEIHLKNLSYIYRKHSN
                     SSNSTFDIATNTQNISFGGANVALILADSNKTLAFDRVEADLKGNALDLKGSRGNAKF
                     DLYYSSNDLNLNVSNIDDNYLNEFLQKQAVQDGVFNLSIKGSGLEYFDGQIDFKNTYV
                     KDLRGINQLISFIDTVPSLLMFKSPTFNQKGLSLHDGKIIFNRKKDLLSVSAINLNGD
                     SVDIYGLGSANLRLNTVDFSLELKTLKSASEAISKVPILNYVILGKNQEISTNLKIDG
                     SIDDPKFHTEILTDTLKTPFNLIKNIIQLPANLLN"
BASE COUNT         3303 a         2069 c         1290 g         3751 t
ORIGIN      
        1 ttttccttga aaatataagt ttttgattat aaaattttaa tcgttaaaag tagctaaatt
       61 aaaataatta aaatttaaat tttatttgca atgtgtaaaa ttttagaagt taaattccgc
      121 atgatgcgga atttattatg aatatggttt tgcttgagtg gcgtatttta cacccagatc
      181 aaaagcttta gcatttgcat cacgagtttt tgcaggaacc atatgaagca tagtttcttt
      241 taaaacatct aaatctatac atttgctcat ataagcagca attgcaagtg caacaactga
      301 ttgagtagcc acatttccta cctcatcttt agctatggta ataataggga tttcaaaaat
      361 ttgccatttt ttataatctt cactttcagg atgtactaaa tttggctcta caactataat
      421 acctccttct tttacacccc cacgaaaacc tttataaccc ttatctgcag tcgaaagcat
      481 aaaatctact tccccttcta cagcataagg aaataaaatt tctttatcat caatgataat
      541 atccacctta gtaggaccgc cacgcacttg tgaagtataa gtagaagcct taaaagcttg
      601 acgaccttct ttaatggctg cttctgctaa aatttctcct gcggtgataa caccttgtcc
      661 gccttcaccg ccaaatctta attgatattt cattttaaag ctcctaaatc caccattctt
      721 ttttctttgg ctgcacgacg tacttcttca taagcgtggc agtattctgg ctgagaatta
      781 tcttcatgta aaattcctgt tggaaattta tcttttcttt cttcaaaatc catgctttca
      841 aatttagctt tatccacaac acgattttta atccaatcaa gcatagctac agcttcgccc
      901 attttgtttt ttctgcctag attgatatga caatttgaaa aaacatctac aaaactataa
      961 cccttatgcg ctaaagcctt ataaattaaa ttttcaagct tattagcttc tatcacatta
     1021 ccccttgcca caaaagaagc tcctgcagct ttagttaatt cacacgcatc aaaattgggg
     1081 tcaatatttc caaattgagc tgttactgta taaaaacctt ttggagtagt tggacttgtt
     1141 tgagaatttg taagtccata gatgaaatta ttgattacaa tatgtgttaa atcaatattt
     1201 ctgcgacaac catgtatggt atgatttcca ccaattgcca aagtatcccc atctccactt
     1261 actacaataa catgtttact aggattggct agtttaatgc ctgttgcata agctattgct
     1321 ctaccatgag tagtatgaac tgtattgcaa tttacataag aactcattct gccactacaa
     1381 cctatacccg aaacaagaca aacatcatcc atattccaac caagtttttc tatcgcgcgg
     1441 ataatacatt ttaaaacaac accatcgcca catccccaac accattgagt aggcatttta
     1501 tctactctta gatattcatc ataattaaaa gccatttata tattctcctt taccttagca
     1561 ataatttcac ttggagtgat aggacgacca tttgcacggt gcaaactaat aaaatcgcga
     1621 cgcgaagtta ctctttcaat ctcttcaaga tattgtccca tattaagctc gcttaccatt
     1681 acttttttaa atttgcttac aacttcagcg atttttttct cagccactgg ataaagagta
     1741 atcggacgga aaagccccac tttaatccct tgctctctta atctttgtat agcttctttt
     1801 gctgaacgac tcacgcttcc ataagcaatg attaaaaact cagcatcatc aagcatatac
     1861 tcttcataag tacaaatatc ttcttgattg ttttttattt tacctatgag tctttccata
     1921 ttttttttca ctataactcc atcttcagtt ggaaaaccta tatctccatg atgaagtcct
     1981 gtaacatgat aacgataacc tgtaaagaaa ggatttaaag ttgcaggctc attttctcct
     2041 gctgcataag gtttataatc ctttttatcg ccttcaaatt ttttacggtt atatacttta
     2101 atatctttta aatcaggtaa aaccgcttta ccattcatgt gccctacagt ttcatccata
     2161 agtaaaaata ctggagtcat atatttttca gctaaattaa acgctctaat ggtttctgta
     2221 taagcttctt caagacttgc aggagcaata gcaatacttg caaaatcccc atgagttggt
     2281 gctttagctt gaaacaaatc tccttgtgct acacgagttg gaagacctgt tgaaggacca
     2341 cctctcataa catttacaat cacaagtgga atttcagcaa taaatgcaag tcctatttgc
     2401 tctgctttta aagaaattcc aggaccgcta cttgcagtca tggattttac tccactcatt
     2461 gccgcaccaa tagccacgct aatacctgaa atttcatctt ccatttgtat aaaagttcca
     2521 tcatttgcag gaagcatatg gcttaattca tgagctatct cactactagg agtaatagga
     2581 taacctccaa aaaatttaca tccacaatca atcgcagctt tggcgattaa aacattacct
     2641 gttgctataa cttctctcat tatttttcct atgctaattt tttgtatttg ttatttttta
     2701 cggctacagc tctatcttta gcctcagcag taagtttggc aaatttaaat tcatctcttt
     2761 ttgccaccat aatagcaaaa tcagggcaat gtgtctcaca ctcggtacag cctatacagg
     2821 attcagggtg tactacctct atcatttgtc ctaaaaccgc atgcacatca tcgcgcatag
     2881 ctaaaacccc agcggggcaa tagctaacac aaatattaca tgctttacat ctatgctcat
     2941 ctacccaaac aggggtatct tttggagctg tcatactcat gtttttttcc tttattaacc
     3001 taatattttt tgaatttctt caccaattaa agccggagaa tccaccacat gaattccata
     3061 gctttttaaa gcttcttttt tagctgcagc actttcatca gcacttccta ctatggcacc
     3121 tgcatgcccc attcttttgc ctttaggagc agttgcacct gcaatgaatg ctaccacagg
     3181 tttgctaata ttttctttaa taaatttagc cgcttccact tccaaactac caccaatttc
     3241 gcctatcatt ataatagcct tagtttcatc atctttttga aattcactta aaagttcttt
     3301 ataagcaaga cctatgatag gatcaccgcc aattcctact gcagtagaaa ttccataacc
     3361 accttgaact acctgattag cagcttcata agttaaagtt ccactttttg aaataagccc
     3421 cacgcaacct tttttaaaaa taaaacctgg cataattcct aatttgcatt cttcagaagt
     3481 gataatacct ggacaatttg gtccaatgat tttcataccc tttttattag catattgctt
     3541 agcaaacatc atatctttta caggcgtatg ctcggtgatt acaactgcaa gcttaatacc
     3601 cgcatcagct gcttcaatca cgctatcacc cacagcaaaa gcagggacaa agatcaagct
     3661 cacatcagcc tttgttgctt taaccgcatc tgcaacggta tcaaaaactg gtttacctaa
     3721 atgagtttgt ccgcctttat gaggggtgac acctccaact atatttgtac cataagccat
     3781 gcattgctca gcgtgaaaag ttgcttcttt acctgtaaaa ccttgaacta ttacttttgt
     3841 atttttatta accaatatac tcattttcca tccttatcct actaaacttt ttacaagctc
     3901 tgcaccgttt ttaagattgg ttgctgcttt gatattttta agatttgaat tatctaaaat
     3961 tgtctttgct tctgctgcgt tagtgccatc aagacgcact acaattggaa tatttacctc
     4021 aacattctta gtagcttcta aaattccatt tgctatccta tcacaacgaa caataccacc
     4081 aaagatattg ataaatataa cttttacatt tttatctctt aaaataattt caaaagcctt
     4141 tgcaacagtt tctggagaag ctcccccacc tacatctaag aaatttgcag gttttgcacc
     4201 actataatta ataatatcca tagttgccat tgctagaccc gcaccattta ccatacaagc
     4261 tacatctcca tctaatttca catagcttaa gccaaattca gccgcttctc tttcagcagg
     4321 attttcttca gtaatatctc taagttcagc aatttcagga tgacgataaa gcgcactatc
     4381 atcaaaactg cattttgcat caagggcata aaaatcccct tctgcagttt taattaaagg
     4441 attaatttca agcatattca tatctttatc catgtaaagc ttataaagtt tagctatcat
     4501 agaaatgagt tttttgcctt catctttatc aagtcccaaa actctcgcta cttcaagtcc
     4561 atgaaacatt ttaaatccaa tttgtggatc aatacctact tttgcaattt tttcaggact
     4621 ttctttggct actttttcta tatccatccc tccttcactt gaagcgataa tggtaatttg
     4681 ctctgccatt ctattaaaca aaatagccaa ataatactct tttactatat tagcgccact
     4741 ttctatataa agtttttgca caagtttgcc ttcaggtcct gtttgatgag ttactaaatt
     4801 tattcctaaa attttacttg tgtaatcttt tacctcatct aaattcttag cgattttaac
     4861 accaccacca agaccacggc ctcctgcgtg aatttgagct ttaactgccc aaacactacc
     4921 gcctaattct ttagcattag ccacagcttc atctacgcta aatgcaactt ttccctttaa
     4981 ggtagggata ccattgtctg caaaaattgc ttttgcttga tactcatgta tgttcattta
     5041 ttctccttta tattgatatt tgattaaaga tttttctaat ttgtcttttt cttgcaaact
     5101 aagatccatt ttcatgattt caatcacacc ttcaagtcct aatcttgcca taactcccaa
     5161 ggctttgttt tgcactccaa attccccatg taaaatcaca ctcataggta aaaactcgcc
     5221 acttcttata gactcaagca ttcttataca agcactagca ggggctaaat aagctgaagt
     5281 tttaagatgt ttgattactt tagctccgcc tgttttaact tcattttcta aatcctcaaa
     5341 ttcttcttca tttaaaaatt cgcttatatt tttattttta acacttgcgt aagattttac
     5401 caaaaccata tcatcattat gaaaaccaat aagtcttgta tccactcttg acattttgac
     5461 attaagtttt ttggcaagtt catacttaaa tcttgcattg tctaaaacac ccgccatggc
     5521 tataattttc tttgatgaaa aaatcccgct ttcataaaga gtattaagta gaaaatccac
     5581 aggattagtt aaaataataa aaagcggatc ttctgtaaaa tctttaattt ttttagcaca
     5641 atcaagcata atgcttgtat ttaactgaag caattcttct ctactttgcc catcttttct
     5701 agcaaaacct gcactaaaaa gcactatatc tgaatttttg gtatgagtat aatctttagt
     5761 gcaaagtaaa tctatattta aatttaaagc agctatgctt tgagtaagct ctagttcttt
     5821 tgcgtaaagc aaatcctcgt taatatctac taaaacaatt tcatttgcta tttctcttaa
     5881 aatcaaagca taagctacgc ttgaacctac attgccagcc cctataacag tgattttcat
     5941 ctttgtccta ttttttctaa aatagcgtta aaagttgcac ttggacgcat gattttattt
     6001 gctttttcat catcaaattt ataataccca cccaaatcca ctttcacacc ttgtgcatcg
     6061 ttaaattcgg ctctgatttt ttcttcatta gaagaaagct ctagggcaat atctttaaaa
     6121 aagctttgaa gctccatatc acttgcctgt cttgctaaat gatttgcaaa atacattgct
     6181 aaataaaaat gacttgttct attatcatct tctttgactt ttcttgatgg agctttatta
     6241 ttttcaagcc attcgcctat agcctcatca agacattctg ctaaaacctt agctttatga
     6301 ttgccacact tatttgcata aaattccaaa cttgcttgca aagccaaaaa ttcacccaaa
     6361 ctatcccaac gcagatgatt ttcttcgact aattgttcta cttgtttagg tgctgaaccc
     6421 cctgctcctg tttcaaacat agctccacca tttaacatag gcacaacaga aagcattttt
     6481 gcacttgttc caagctctaa aataggaaaa agatcggtta aataatccct taaaacatta
     6541 cccgtgatag aaataacatc tttaccttct cggattaact ctaaacttct taaacaagct
     6601 tcttttggag ttaaaatggc tacattttta cccttttctt ttaaacgatt ttgtaccaaa
     6661 gttatcatga ttttattact agctcttttg ctatctaacc aaaaaatagc ttcggctcca
     6721 ctaagttctg atctttctat acctaaatca atccaattta acactgcatc aaatttagcc
     6781 tgattagctc tataaatatc accttttcta accttatgtt ctaataaaac tttaccgtta
     6841 gaaactattt taaaagttcc ttcttcttta gccacaaagg ttttatcgtg cgatccatat
     6901 tcttgagctt ttttagccat taaacctaca ttagatacac tgccaagttt tgaaggattt
     6961 aaagtaccat ttttatgcaa atcttcaata accgcctcat aaatagttgc gtaagtttga
     7021 tcaggaatta cggcatttgt gtccttttcc ttaccttcct tatcccacaa tcttgcgcca
     7081 tttttaagca ttgcaggcat agaagcatca acgataacat cgcttggaac atgaagattt
     7141 gtaatgcctt tatctgaatt taccatagaa atatctgcag atttagctaa aatttcattg
     7201 tattttttta aaatttcatc ttttttgctt gaattttcga tcttacttaa aagctcactt
     7261 aaaccattat ttggattaat gcctaatttt tcaaattcat cttgaaattc gataaataat
     7321 tctttaaaaa atacttttac cgcataacca aaaagtatag gatcacttac tttcatcatt
     7381 gtagctttta aatgcaaaga aaaaagcaca tcatcatctt tgcttgcttt aatttctttt
     7441 gtataaaatt cctgaagttt ttgcacatcc ataaaagtag cgtctaaaat ttcatttttt
     7501 tcaagtttta agccctcttt taaaatttct tttttaccat caacgcttgt aaattctata
     7561 ttagccacac aatcttgatc gattaaaacc gctttttcat tagagaaaaa atccccttct
     7621 ttcatgtaag aaacacgagt ttttgagttt ggattaaact caaccacacg ataaggattg
     7681 ttttttgcat aatcttttac cgcttttgtt gaacgacgat ctgaatttcc ttgtcttaat
     7741 acaggattaa ctgctgaacc taaaactttt tgatattttg ttttaatttg caattcttca
     7801 tcattttttg gctcatctgg gtaatttggt aacatgtaac ccttatcttg caattcttta
     7861 atcgccgcct taagctgagg aatagaagct gaaatatttg gggttttaat aagatttgca
     7921 tccgatcttt tgacaagctc acctaaaagt tctaaagcat cttcacatct ttgttcctct
     7981 tttaaatact cactaaaagt agctaaaatc cttccagaca aagaaatatc cgaggttttt
     8041 actcctatat gtgccctact taaaaaagct ttcactatag gcaaaaacga ataagttgca
     8101 agagctggag actcatctgt taaggtataa gtaatttgca tttttagtcc tttaaaatac
     8161 ttatttttat tttcattttt aagtatatta caaataaaaa aaaatgcaag agtaagttta
     8221 aagtttgttt tagttttcaa acaaacttta aatattttta attaagtaaa ttagcaggaa
     8281 gttgtatgat atttttaata agattaaaag gggtttttag ggtatctgtt aaaatttcgg
     8341 tatgaaattt agggtcatct atacttccat ctatttttaa gtttgtgcta atttcttgat
     8401 ttttacctaa aattacataa tttaaaattg gaaccttgga tatagcttct gaagctgatt
     8461 ttaaagtttt aagctctaaa ctaaaatcca ctgtatttaa tcttaaattt gctgatccta
     8521 aaccatatat atctacacta tcgccattta aattaatagc tgaaacactt aaaagatctt
     8581 tttttctatt aaaaataatc tttccatcat gtaagcttaa acctttttga ttaaaagttg
     8641 gagatttaaa catcaataaa cttggtacag tatcgatgaa ggaaataagc tgatttatac
     8701 ctcttaaatc cttcacataa gtatttttaa aatcgatctg tccatcaaaa tactccaatc
     8761 cacttccttt tatacttaag ttaaacactc catcttgaac agcttgtttt tgtaaaaact
     8821 catttaaata attatcatca atattgctaa cgtttaaatt taaatcatta gaagaataat
     8881 aaagatcaaa ttttgcattt cctctagaac ctttaagatc taaagcattg ccttttaaat
     8941 cagcttctac tctatcaaaa gccaaagttt tattagaatc tgccaaaatt aaagctacat
     9001 ttgctccacc aaaactaata ttttgggtat tagtagcaat atcaaatgtt gaatttgaag
     9061 agttggaatg ttttctataa atataactta aattttttaa atgaatttct ttattatcag
     9121 aacttatttt agcacttgct gtatcacttt gagtatgaat ttccataatg cccttatttt
     9181 ttacaatatc aaagctatca ttttcataag gagtttgacc gttgataagt aaattatttt
     9241 taaaataagt atcattaaca cttgcattaa aatcttcaaa atttaaagtt ttataataaa
     9301 catttttagc atcgataaac ccaagctttt taagtaatgg agaaaatgaa aataaaatct
     9361 taggattatt aagattagcc tcaagtccat ctttaaaatt taaaatcaaa ttccactgag
     9421 gaatgctaat attaacattt tgcgaataat ctaattttac ttctacattt tgatttttta
     9481 aatctaaaag ctctccattg tcaaaataaa gccttgaaat ctgagtattg aaatttcctt
     9541 gctgtttttg taagtcaaat ttagcattaa aatcagcttc taaaaagcca tttttaacac
     9601 tggcattttc tatatttaaa tcattttgat ttaattttac aaatgctttt gtaatattaa
     9661 aatcagccaa agaaatacta gcattctcta aagctaaaat accactataa gaaatttcac
     9721 ccttatcatg aaaatcaatt ttaagctcca aatcactttt aatttttccg cttttttgat
     9781 aaaaaggtag tgaaaaatga taatcctcta aagctttagc aagtttttcg tcaaatttta
     9841 gattatcaga cttaatgcgc aaataaatcc caactttttt ttcatcaaac aaatcatata
     9901 gataaacctt actagaactt aaatcagcac cattatagaa agctttatta aagacaaaat
     9961 cgagcttttg tttgtttaaa tttaaatcga gttttggaat ttcaatagca ttcattttat
    10021 catccaagcg aactttgaca ttattaacat aacctgatgc actaatattg tctaaataat
    10081 aattatcttt agtaaaatct ataaagccct gcaaataatc taaatgataa aattctccct
    10141 tagccctata tgctacccaa agatttaaac tctgcggaag ttctattctt ttattaactc
    10201 ttttaaaaat ttccgtaata tttctaatgt ttaaatcttc tattttataa gctaaatttt
    10261 tatctttgta agagatgctt gcgttaaagt caagcaattc tccacttgct ctaccttgaa
    10321 aataataaaa ctcgctctta gtattgatgc ttaaatttcc atcaatactt aaatcataat
    10381 cttttaataa aagtttttta atatcagcta taa
//
LOCUS       DAPIYB010000063        10103 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.064, whole genome shotgun sequence.
ACCESSION   DAPIYB010000063 DAPIYB010000000
VERSION     DAPIYB010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10103
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.064"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..89)
                     /gene="ffs"
                     /locus_tag="RJ318_001284"
     ncRNA           complement(<1..89)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="RJ318_001284"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            269..1034
                     /locus_tag="RJ318_001285"
                     /pseudo
     CDS             269..1034
                     /locus_tag="RJ318_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002873756.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
     gene            991..2865
                     /locus_tag="RJ318_001286"
     CDS             991..2865
                     /locus_tag="RJ318_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HDV7431147.1"
                     /translation="MNFQVKTLETFNPFESLNHEQANTEQILDFRVIDFKLLCSSVKP
                     AKTKTYERKDFDLFYADDFFVKNYNTIVQKFLIEIYPKTQSFPFTVKLRSNSNLTHLK
                     ASINLTENFKYYPNLKFDILQNIYKIMIKQKFLILRLDKNLFDKIDDFILSIQKSPSI
                     KEIELEIAKGVDKIEHKSDEIIYHRDVNEECFDENINYDEGNYCKPIEKNELLFEYIY
                     RILGKEGRNLRGEILHLNPIAFLDNPFIIKDESIYTEELEDRIKYFSANYGFLNKDHT
                     GYCIANNLKLSQIGLKTTGSIKTNTDENINLEITNFDISDDAIKSGIVNVQASNIKVN
                     GNVGATKLYGKNISIKGLTHAKSEIFAQDIFITTHKGTLQADTVYIKNLENGTIIAKN
                     VFVENCMGGKIEAENIYICNLLTDNTLYPRKNLIITNNIKFKNNIVVSPLVSIENNSD
                     TECENLKNLSLKKIKSKLDDTISKMQNYYDYLIKNQIKIIKLQKTKNPNAIEMKFSNL
                     YHDIIKKYNHLSISYKKFIKLKYQIDAKLNFLNEMVYNVKIYIKAENIGEDNFLKFYP
                     NTNTNLELKHHINLKDYEKVLYLEKGQQVSYIKSSHNYSESDIEEIKIIFEKLEKDNS
                     "
     gene            complement(2869..4506)
                     /locus_tag="RJ318_001287"
     CDS             complement(2869..4506)
                     /locus_tag="RJ318_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDV7431148.1"
                     /translation="MMNSFYNGISGVKSNSFGIDITANNIANVNTTGFKYSDAQFKDI
                     FYTTITTQSTNPAQGGYGSSAASSQVVFEQGSPVASDGEFDVALQGKGFFGVLGADGN
                     AYYTRNGSFRRDANGYLVDSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTPVNN
                     GFTVNSNNSFSIGTTASQGAIKVPVNMYLPPQVTQNVKWSGSLNTNTTTEVVKVDLDP
                     SKFNITKTEDGKYVVSGSVSKEDVFSAKAGDRIILNFTDDNGVKTSFEATLDENLNFK
                     SNELDLKGLDENSIKLDTAQISTEQQKANKDILESPIYNADGSKSTLRVTLERVLPQE
                     GDNIQYKAIAQIYDSNGNAVGNPTEGNMVFDKNGALLQNNITSIANPNGGTINIDLGS
                     PYDANKPGSGYSGIYIKQGVEKNVVTQQDGVAEGFFEQYNISDDGSIVAQFSNGKNAI
                     VGKLALYNFINEQGLVAMGDNIFAATANSGDASFIMKDGQVVNTAKFKGGFLEQSNVD
                     LSAELSNLIVTQKAFDASSKSITTSDQMIQKAINMKR"
     gene            complement(4510..5394)
                     /locus_tag="RJ318_001288"
     CDS             complement(4510..5394)
                     /locus_tag="RJ318_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod modification protein"
                     /protein_id="HDV7431149.1"
                     /translation="MISSSDWNLNTTATTSGTTSSGSTSGTTRTDSSSSSGIVSNPNA
                     TLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMQK
                     LSDSFSTSMSTSALGAIGKMATVSDNKIKLTGADELIALKMYLPEDSDENGVTLEIYD
                     SNNKLVFSEKSDAKSISQGLFTMEWPGRNNDGVYAGDGEYTVKMVYNNKNGEKITANY
                     GTYPIEGVVFKDGVAYAKMAGQEVPFDAIQEITDYKLGSSSSTGGSGSSGDSSGGSSD
                     GDSSGSGSTEDGDKEEKA"
     gene            complement(5448..7241)
                     /locus_tag="RJ318_001289"
     CDS             complement(5448..7241)
                     /locus_tag="RJ318_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDV7431150.1"
                     /translation="MMSNLAPQNDVLNLTPSKTSNTSSSFSKTSKNKEHESSDSKNST
                     QDDTESFLNSLLNSINETNEFLPDHMKISQKEVVNEAMSRLQKGAFDESDKISIFESA
                     SFMQILSLLDKLKTDTADVKLANLSTQLSSLIKTEANFNALKGASNLSELLDIAKDLG
                     LNVKNIKVDRLLDLKATFPNLDKADFFKGAVDNVFKEIINNKISNVSKNLNHNLENTT
                     HTTSTHSMQKTNSKDSGSLLSQTLKNLDSILSSKESKHEKNDKVKSKIEEDTTDAKNT
                     LKNIKNDEFAKNLTEELNIKDKKNQDNLNKESKDLNKDFNKELNKNQEKNNLNQENIQ
                     DQNKNLKNNDQNLNLDKNLNKEIVKDTQKLVSNLTQKDFNLNKEPKNNNKENKDIKQN
                     FFDQKLNFENLNKTQVVQNKENNANFNNNTTNKETFTQEQTKTHSENVDKNSLDELNS
                     LVKDLNKVTQNNARNITPKETLQYFSQDLKEAVDQYKAPITKLSITLNPNNLGEVEVT
                     LIQRGNNLHINFNSNANAMNLFIQNQAEFKNSLVNMGFTGLEMNFSDQGKREQNQNQG
                     KNRSGYGFKDALDGKNESEKVNLELVLAKYF"
     gene            complement(7259..7582)
                     /locus_tag="RJ318_001290"
     CDS             complement(7259..7582)
                     /locus_tag="RJ318_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431151.1"
                     /translation="MSKPLNEEIFIEFKSDLAERKNEVLLQVLELLETFRSDKNEKMA
                     RISSELTEILENEENLEKILNAKNLEELLNILIALNEDKMIKVYEDSYLKEKFPNVMV
                     DQFLK"
     gene            7717..9525
                     /gene="typA"
                     /locus_tag="RJ318_001291"
     CDS             7717..9525
                     /gene="typA"
                     /locus_tag="RJ318_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDV7431152.1"
                     /translation="MENIRNIAVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDS
                     NDIEKERGITILSKNTAINYKGTKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQE
                     GVMPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALDANDEQLDFA
                     IVYAAAKNGYAKLDLNDESDNMEPLFKTILERVPAPSGTNDNPLQLQVFTLGYDNFVG
                     KIGIARIFNGVVKKNQSVMLAKADGTKVNGRISKLIGFMGLEKMDIEEAGSGDIVAIA
                     GFEALDVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGTEGKHVTSNKIAERL
                     EAEMKTNIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDG
                     VKTEPFEHLVIDVPEEFSGAVIEKLGKRKAEMKTMAPTGDGQTRLEFEIPARGLIGFR
                     SQFLTDTKGEGVMNHSFLEFRPFSGAVEKRNNGALISMENGVALGYSLFNLQERGVLF
                     IEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKLSLERAL
                     EWIEEDELVEVTPVNVRVRKRYLDPTQRKRMEKAKS"
     gene            9525..>10103
                     /locus_tag="RJ318_001292"
     CDS             9525..>10103
                     /locus_tag="RJ318_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(A) polymerase"
                     /protein_id="HDV7431153.1"
                     /translation="MDLKSLENNRLYILKRLGILKFLSIIEALLVGFLAFVFIRDALI
                     AVILAVFVGVFFFRFTAKKLKLAQKELQINALNLFLRRFGAKFKKQSLSQKDFLKLGL
                     TKDLKEFKSQNCFEFKDFKIYDIQFLDENKRFFCGILLEISKANKNPSFENEEQIYIK
                     LTDKNFTLNHIFSKENHYLIATLSNPFFIDIKK"
BASE COUNT         3566 a         1580 c         1467 g         3490 t
ORIGIN      
        1 gataactgcg gcacacacta aaatcaagtg ctctgctgtg ttcccaccct gaagcggtgc
       61 ttaaaaatag cattgcacag gtctaagaaa aggcttaaaa attatatcat aatatactta
      121 aaaagccttg agttgttaag attcaatata taaatttgca atcaatccat tgtttttata
      181 agaattttaa aaattcattt gtcaaattat tattttattt tcaaaaaata cgatataaaa
      241 ataattatta catccaaaaa ggaaaaatat ggaagttaaa tggagtagag attttagcat
      301 taaaaatatg caattagaca aacaacacga actaattttt gaaattacca atcttgcaaa
      361 tgatttagct ctaaacattc aagataataa tacacaacac aaaaatgatt taaaacaaat
      421 tcttgtaaag ctatttcaat acatcaaaat tcattttaaa gatgaagaaa aatttatgga
      481 aagcattgat tttcctttga ttgaagaaca taaaaaatct catcaaatat tagtagaaaa
      541 aactaaagag cttttagaac actcaaatga tattgtaaaa atgtctcaag aactttccat
      601 attaaccaaa gattggattt tagatcattt tgctaatgaa gatttatgga tagctaattt
      661 tacaaaaaaa aaccctacac cttcaagaaa tccattatac cttagaacaa tacataaaac
      721 taaaatcaat caaacaagac ctaagagctg aaaaaactca tgattatatt tgcaattgtt
      781 ctttgcgtat ccatgcagtt ccacagacta tacatcaaga gcttgttagc aaagaaaata
      841 ccttaaagtg cgaaaaatgt gggcaaattt tagttcattt ggattatttt gatttgaatc
      901 aaaatttcga aaaattcaat gctatttttg aagatgcact acaaaatcac catttcacga
      961 ctcaaaaaaa tgatatgggg ggggggatag atgaattttc aagtaaaaac cttagaaact
     1021 ttcaatcctt ttgaaagttt aaatcatgaa caagcaaaca cagaacaaat tcttgatttt
     1081 agagttatag attttaaact tctgtgttct agtgtaaaac cagcaaaaac aaaaacttat
     1141 gaaagaaagg attttgactt attttatgca gatgattttt ttgtaaaaaa ctacaatacc
     1201 atagtgcaaa aatttcttat agaaatttac ccaaaaaccc aaagttttcc ttttacagtc
     1261 aaacttagat ccaactccaa cctaacccat ctaaaagcca gtatcaacct tacagaaaat
     1321 tttaaatatt accctaattt aaaatttgat attttgcaaa atatctacaa aataatgatc
     1381 aaacaaaaat ttttaatctt aagacttgat aaaaatttat ttgataagat tgatgatttt
     1441 atcttatcaa tacaaaaaag tccatctatt aaagaaatag agcttgaaat tgccaaaggt
     1501 gtagataaga ttgaacataa aagtgatgaa attatttatc atagagatgt taacgaagaa
     1561 tgttttgacg aaaatattaa ctatgatgaa ggaaactact gtaaacctat tgaaaaaaat
     1621 gagctacttt ttgaatacat ttatagaatt cttggaaaag aaggacgaaa tttaagagga
     1681 gagatacttc atttaaatcc aatagccttt cttgataatc cttttatcat aaaagatgaa
     1741 agcatttaca cagaagaatt agaagataga attaaatatt ttagtgccaa ttatggattt
     1801 ttaaacaaag atcatacagg atattgtatc gcaaataatt taaaattatc acaaataggg
     1861 cttaaaacaa ccggttcaat caaaacaaat accgatgaaa atataaactt agaaatcact
     1921 aattttgata taagtgatga tgctattaaa tcaggtattg taaatgttca agcttcaaat
     1981 ataaaagtaa atgggaatgt tggagcaaca aaactttatg gaaaaaatat cagtatcaaa
     2041 ggcttaactc atgcaaaaag cgaaattttt gcacaagata tttttattac aacacacaaa
     2101 ggaactttgc aagctgacac tgtatatata aaaaatttag aaaatgggac aattatagct
     2161 aaaaatgtat ttgttgaaaa ctgcatgggt ggaaaaatag aagcagaaaa tatttatatt
     2221 tgcaatttac taacggataa tactttatat ccaagaaaaa atctaatcat aacaaacaat
     2281 ataaaattta aaaacaatat cgtagtttca ccactagttt ctattgaaaa caactcagat
     2341 acagaatgcg aaaatcttaa aaatctaagc cttaaaaaaa taaaaagtaa gcttgatgac
     2401 accataagca aaatgcaaaa ttactatgat tatctaatca aaaatcaaat caaaatcatc
     2461 aaacttcaaa agactaaaaa tcctaacgcc atagaaatga aattttcaaa tctttatcac
     2521 gatatcataa aaaaatacaa tcatcttagc atttcgtata aaaaatttat aaaattaaaa
     2581 tatcaaattg atgcgaaatt aaatttctta aatgaaatgg tttacaatgt aaaaatatac
     2641 ataaaagccg aaaatatcgg agaggataat tttttaaaat tttatcctaa cacaaacacc
     2701 aaccttgaac taaaacatca tataaattta aaagactatg aaaaggtttt atatcttgaa
     2761 aaaggacagc aagtaagtta tattaaatca agccataatt atagcgaaag cgacatagaa
     2821 gaaattaaaa ttatttttga aaaattagaa aaagataatt cctaagaatt atcttttcat
     2881 attaatggct ttttgtatca tctgatcact tgtagtgata ctttttgagc ttgcatcaaa
     2941 ggctttttga gttacgataa ggtttgaaag ctctgcgctt aaatcaacat ttgattgttc
     3001 taagaatccg cctttaaatt tagctgtatt aacaacttga ccatctttca taataaaact
     3061 tgcatcaccg ctatttgccg ttgctgcaaa aatattatct cccatagcaa ctaatccttg
     3121 ctcattgata aaattatata aagcaagctt tccaactatg gcatttttac cattgctaaa
     3181 ttgcgcaaca atacttccat catcggatat attatattgt tcaaaaaacc cttcagctac
     3241 accatcttgt tgtgtaacta catttttttc gacgccttgt ttaatataaa tcccactata
     3301 acccgaacca ggcttgttag catcataagg agaacctaaa tcaatattaa ttgttccacc
     3361 atttggattt gcaatgcttg taatattgtt ttgaagcaaa gcaccatttt tatcaaaaac
     3421 catatttcct tcagtcggat tgcctacggc attgccatta gaatcataaa tttgtgcaat
     3481 agctttatat tgtatattat cgccttcttg cggtaaaact ctttcaagtg taacccttaa
     3541 agtgctttta cttccatctg cattataaat aggggattct aaaatatctt tattggcttt
     3601 ttgttgctct gttgaaattt gagctgtatc aagcttgatg ctattttcat ccaatccttt
     3661 taaatcaagc tcgttacttt taaaatttag attttcatct aaagtcgctt caaagcttgt
     3721 ttttacgcca ttatcatcag tgaaatttaa aataatccta tcacccgctt tagcactaaa
     3781 cacatcttct ttgctaacac taccactaac tacatatttt ccatcttcag tttttgtaat
     3841 gttaaattta ctaggatcaa gatctacttt aactacttct gttgttgtgt tagtatttaa
     3901 acttccactc cattttacat tttgagttac ttgaggaggt aaatacatat tcacaggtac
     3961 tttaatagcc ccttgagaag cggttgtgcc tatactgaaa gaattatttg aatttacagt
     4021 aaaaccatta tttaccggag ttcctgtgtt aagataatcc cccataagcc cagcaactct
     4081 atcgctatag ttaataccag taaaagcagg attcattgtt cctaaaacaa aatttccata
     4141 agaatctacc aaatatccat tggcatctct tctaaatgat ccatttctag tatagtaagc
     4201 attgccatca gcccctaaaa ccccaaaaaa tccttttcct tgcaaagcca catcaaattc
     4261 gccatcactt gcaacaggag aaccctgttc gaaaacaact tgagaagatg ctgcactgct
     4321 accataacca ccttgagcag ggttggttga ttgggttgtt atggtagtat aaaaaatatc
     4381 tttaaattga gcatcagagt atttaaagcc cgtggtattg acatttgcta tgttattagc
     4441 agtgatatca ataccaaagc tattgctttt tactccagaa atcccattat aaaatgaatt
     4501 catcatggct tatgcctttt cctctttgtc gccatcttct gtagatccag acccagaaga
     4561 atctccatcg cttgaaccac cacttgagtc tccacttgaa ccgcttcctc cagtagatga
     4621 agatgaacca agcttataat ctgttatttc ttgtattgca tcaaaaggaa cttcttgtcc
     4681 agccattttt gcataggcaa caccatcttt aaaaacaaca ccttcgatag gataagttcc
     4741 gtaatttgca gtgatttttt caccattttt attattataa accattttaa cagtgtactc
     4801 accatcacct gcataaaccc catcgttatt tcttcctggc cactccatag taaataaacc
     4861 ttgagaaata gatttagcat cgcttttttc actgaaaaca agtttattat tgctatcata
     4921 aatttctagc gtaacaccgt tttcatcaga atcttcaggc aaatacattt taagagcgat
     4981 aagctcatct gcacctgtaa gtttgatttt attatctgaa acagttgcca ttttaccaat
     5041 agcccctaaa gctgaagtac tcatacttgt actaaaagaa tcagaaagct tttgcatagt
     5101 ttcaaccatt ttttgcatag ttgtattggt attttgctgc atttcaagtg cgctaagctg
     5161 cgaagtttga gtaagcattt tatcgctatc cataggatct gttggatctt gatgttgaag
     5221 ctctatcaaa agaagtttta aaaacgcatc cttatctaag gtagcgtttg gattgctcac
     5281 tattcctgag ctactgcttg aatctgttct agttgttcca ctagtacttc ctgaagaagt
     5341 agtacctgaa gttgtagcag tggtatttaa attccaatcc gatgatgata tcattataaa
     5401 ctccttttta tttagttttt tattatttaa gcaataagtg ttccaattta aaaatacttc
     5461 gctaaaacaa gctctagatt gactttttca ctttcatttt ttccatctaa agcatcttta
     5521 aaaccatatc cactacgatt ttttccttga ttttgatttt gctctctttt accttgatca
     5581 ctaaaattca tttcaagtcc agtaaatccc atatttacaa gagaattttt aaactcggct
     5641 tgattctgga taaacaaatt cattgcattg gcattggagt tgaaattgat atgaaggtta
     5701 ttacctcttt gtatcaaagt tacctccact tctccaagat tattaggatt tagagtgata
     5761 ctaagtttag taataggcgc tttgtattga tccacagcct cttttaaatc ttgtgaaaaa
     5821 tactgcaaag tttctttagg agtgatattg cgagcattgt tttgtgttac tttatttaaa
     5881 tctttgacta aagaatttaa ctcatctaag ctatttttat ctacattttc actgtgcgtt
     5941 tttgtttgct cttgagtaaa agtttcttta ttagtagtat tattattaaa atttgcatta
     6001 ttctctttgt tttgaactac ttgagtttta tttaaatttt caaaatttaa tttttgatca
     6061 aagaaatttt gttttatatc tttattttct ttgttgttgt ttttaggctc tttatttaga
     6121 ttaaaatctt tttgtgttaa atttgaaact aatttctgag tatctttaac aatttcttta
     6181 tttaaatttt tatcaagatt taaattttga tcattgttct ttaaattttt attttgatct
     6241 tgtatatttt cttgatttaa attgtttttt tcttgatttt tatttaactc tttattaaaa
     6301 tctttgttta agtctttgct ttctttattt aaattatctt ggtttttttt atcttttata
     6361 tttaactctt ctgttaaatt ttttgcaaac tcatcatttt tgatattttt taaagtattt
     6421 ttagcatctg tggtatcttc ttctattttt gatttaactt tatcgttttt ttcgtgtttg
     6481 ctttctttgg atgaaagtat ggaatctaaa ttttttaaag tttgagaaag caaagaaccg
     6541 ctatctttag aatttgtttt ttgcatagaa tgagtgcttg tagtatgagt tgtattttct
     6601 aaattgtgat ttaaattttt actcacattg gaaattttat tattgatgat ttctttaaaa
     6661 acattatcca cagcaccctt aaaaaaatca gccttatcta aatttggaaa agttgcttta
     6721 agatcaagaa gacgatctac tttaatattt tttacattta agcccagatc tttagctatg
     6781 tccaaaagct cactaagatt tgatgcacct tttaaagcat taaaattagc ctctgtttta
     6841 ataagacttg aaagttgagt agaaagattt gctagtttaa catctgctgt atctgttttt
     6901 agcttatcta acaaagaaag aatttgcata aaagaagcag attcgaaaat gcttatctta
     6961 tcgctctcat caaaagctcc tttttgaagt ctgctcatcg cttcattaac aacttctttt
     7021 tgactgatct tcatatgatc aggtaaaaat tcattggttt cattgataga attaagcaaa
     7081 gaatttaaaa aactttccgt atcatcttga gttgaatttt tactatcact actttcatgt
     7141 tctttatttt tactagtttt actaaaggaa ctactagtat tagaagtttt actcggcgta
     7201 agatttaaaa catcattttg cggagctaaa tttgacatca cttttccttc aaaaaaaatt
     7261 attttaaaaa ttgatctacc attacattag gaaatttttc tttcaaataa gaatcttcat
     7321 atactttaat catcttatct tcatttaaag caattaaaat atttaaaagc tcttctaaat
     7381 ttttagcatt taaaattttt tctaaatttt cttcattttc taaaatttct gtaagctcac
     7441 ttgaaattct tgccattttt tcatttttat ctgatctaaa agtttctaaa agttctaaaa
     7501 cttgaagtaa aacttcattt tttctctcag ctaaatcgct tttaaattca ataaaaatct
     7561 cttcatttaa tggttttgac attttaactt cctttttaaa attttaattt cacaagtctt
     7621 taaagcaaga agtgttccaa gttttgatgc tttatagttt aagttaaatt tttgtataat
     7681 ctaagctttt aaaaatttag ctttggagaa gaaaatttgg aaaacattag aaatatagca
     7741 gttatagctc acgttgacca tggtaaaacc actatggtag atgaattatt aaaacaatca
     7801 ggcaccttta gcgaaagaga acaaatttca gaacgcgtta tggatagcaa cgatatagaa
     7861 aaagaacgtg gcattaccat actttcaaaa aacacagcga tcaattacaa aggtacaaaa
     7921 atcaacatca tagatactcc agggcatgct gattttggcg gagaagtaga acgcgtttta
     7981 aaaatgattg atggagtttt gcttttggtg gatgctcaag aaggcgttat gccacaaact
     8041 aaattcgtgg ttaaaaaagc tttatcttta gggcttaaac ctatagttgt aatcaacaaa
     8101 atcgacaaac cagctgctga tcctgaaaga gtgatcaatg aaatttttga tctttttgta
     8161 gccctagatg caaacgatga gcaacttgac tttgccatag tttatgctgc agcaaaaaat
     8221 ggttatgcta agcttgatct aaacgatgaa agtgataata tggagccact ttttaaaacc
     8281 atacttgaac gcgttccagc accaagtggc acaaatgaca atcctttaca acttcaagtt
     8341 ttcactttag ggtatgataa ttttgtaggt aaaataggca ttgctagaat tttcaatggg
     8401 gttgtgaaga aaaaccaaag cgtaatgctt gcaaaagctg atggcaccaa agtaaatggt
     8461 agaatttcaa aactcattgg ctttatgggc ttagaaaaaa tggatattga agaagcagga
     8521 agtggagata tcgtagctat agcaggtttt gaagctttag atgtgggtga tagcgttgta
     8581 gatccaaaca atcctatgcc acttgatcct ttacacattg aagagccgac tttaagcata
     8641 gtattttctg taaatgatgg accattagca ggaactgaag gaaaacatgt aacttcaaat
     8701 aaaatcgctg aacgtttaga agctgaaatg aaaactaata ttgctatgaa atacgaaagc
     8761 acaggcgaag gcaaatttaa agtaagcggt aggggcgaac ttcaaatcac tattttagct
     8821 gaaaatatgc gtcgtgaagg ttttgagttt tgtatgggaa gacctgaagt tatcgtaaag
     8881 gttgaagatg gagttaaaac agaacctttt gaacatttag ttatcgatgt gcctgaagaa
     8941 tttagcggtg cggtaataga aaaacttggc aaaagaaaag ctgaaatgaa aaccatggca
     9001 ccaacgggcg atggacaaac aaggcttgag tttgaaattc cagcacgcgg acttataggt
     9061 tttagaagtc agtttttaac tgataccaaa ggcgaaggcg tgatgaatca tagcttttta
     9121 gaattccgtc cttttagcgg tgcggttgaa aagcgtaata atggagcgtt aatttctatg
     9181 gaaaatggcg tggctttagg gtattctttg tttaaccttc aagagcgtgg agtacttttc
     9241 atagagcctc aaactaaagt ttataccggt atgattatag gtgagcactc tcgtccaaat
     9301 gatttagatg ttaatcctat caaaggaaag aatcttacca atgtaagagc aagtggaagc
     9361 gatgatgcaa tcaaacttgt gccacctaga aaattaagtc ttgaaagagc tttagagtgg
     9421 atagaagaag atgaacttgt agaagttaca cctgtaaatg tgcgtgttcg caaacgctat
     9481 cttgacccaa ctcaaagaaa aagaatggaa aaagcaaaat cttaatggat ttaaaaagct
     9541 tagaaaataa tagactttat atacttaaac gcttaggaat cttaaaattc ctaagcatta
     9601 tcgaagcctt acttgtaggt tttttagcct ttgtttttat aagagatgcc ttaatcgcag
     9661 taattttagc tgtttttgta ggtgtttttt tctttcgttt tacagctaaa aaactaaaac
     9721 tcgcacaaaa agaattacaa attaatgctt taaatttgtt tttgcgtcgt tttggggcaa
     9781 aatttaaaaa gcaaagttta agccaaaaag actttttaaa attaggactt acaaaggatt
     9841 tgaaagaatt taaaagtcaa aactgctttg aatttaagga ttttaaaatt tatgatattc
     9901 agtttttaga cgaaaacaaa cgcttttttt gcggaatttt gctcgaaatt tcaaaagcaa
     9961 acaaaaatcc tagctttgaa aacgaagaac aaatttatat caaacttaca gataaaaatt
    10021 tcactttaaa tcatatcttt tctaaagaaa atcattatct tatcgctact ttaagcaatc
    10081 ctttttttat agatataaaa aaa
//
LOCUS       DAPIYB010000064         9238 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.065, whole genome shotgun sequence.
ACCESSION   DAPIYB010000064 DAPIYB010000000
VERSION     DAPIYB010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9238
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.065"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            52..1368
                     /locus_tag="RJ318_001293"
     CDS             52..1368
                     /locus_tag="RJ318_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDV7431154.1"
                     /translation="MAKKQLSLTRLSFPIFWDLLSKYLTVIINTAMVSHYSNFLVGAM
                     GAGNQILDLFITIFSFLSVGCSVVIAQAIGAKDHVLARKVIHQSLFLNALLGFVCGVL
                     ILWHGEYLLYLLKIPQELLKDSEIYLHMLAICLFFDAIGIVLAAIVRVYNMAYWVMLI
                     GFLMDIVVICGNYYVLHYTKSELFGVGLSNIFARIVAIVALLVILFYKLKIHLKIKEM
                     IKLEKEVLKKVLNIGGFSAGENLLWIVQYTIAFAFVASLGEASLSVQTIYFQISMLIM
                     LIGQATSIANEIIVGKLVGARYENIAYKHAWRALYFSVIASALVALLNYLCQDFTMQI
                     LGLKEELKNLMIPLFALSIFLEISRTFNIVMVNSLRASGDAKFPFFSGLVFMMGVSLP
                     VGYVLCFHFNLGILGVWIGFCADEFLRGMVNSYRWKSKKWQGKALV"
     gene            1344..1991
                     /locus_tag="RJ318_001294"
     CDS             1344..1991
                     /locus_tag="RJ318_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDV7431155.1"
                     /translation="MARQSSSLKSFIYKDECYFYSKKRIKTLRLRINERGEFVLSIPY
                     FCTFKSVYEFLDKSSSWMNEAKKRFEKKVLKDDELIFLAKKYKIIFDENVKKTYFDKD
                     KIICQNKAKLDLFLRQNAKKIFTFYLKKWSQKTGLFYTHLSIKNMKTRWGSCNHNKAY
                     INLNLKLIQKSLRAIEYVILHEICHLKFPNHSKEFYDFIEYFMSDFRQREKEFLS"
     gene            2033..3553
                     /locus_tag="RJ318_001295"
     CDS             2033..3553
                     /locus_tag="RJ318_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431156.1"
                     /translation="MTLDFDFIYNADNDIFEYLLRFYAKNYNYTLSKEENTYHFSIDA
                     DEENLKTFCDSLNLMSHSVFLKKFDVKAGQDFNPCIPEDKEFSKFSYITHLNSNAYQE
                     KKLLNKNEWGVFCECEFSSNLSEFEKINEENFNTFLNLAFDLLSQEKKIYLKDKNGIY
                     EFSLFKNEFIGDFLLPCDIKAINSVFVCSNENLKLLASLEKPLMKLRLNAMFRKNHNL
                     DFSDFKIRLARDLFCFALGLKLFENEYKFLSVKKIEEYQKDFYISALDEQVVVLEGFE
                     FINAKARELIFSKEDKNMARISYLVSRYKEKAFILELSKDDEDILLINKELNLLKLCL
                     PKHSKELYEEIKKDEIGARLLENFSKEFPLLDENFELQNNFYSLFGLVGRVLNLGKNL
                     QESVSELLKIADESKMPRGVKIDYRLKEDKSFDYTRTLRSAMSFMLAGVDSANIAYGA
                     VESLAYFLRDTYDELREKKQSDLALISGSLFEHKSLLKNTLKHLKNCQLSDVPLRI"
     gene            3534..5720
                     /gene="hypF"
                     /locus_tag="RJ318_001296"
     CDS             3534..5720
                     /gene="hypF"
                     /locus_tag="RJ318_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HDV7431157.1"
                     /translation="MCHLGYKIKISGLVQGVGFRPLVYELALKSKLFGEVRNDGFGVE
                     IILACTQKECENFIENLKNHLPPLARIDQLIITQISISNYENFSITPSLENTKSTPML
                     SDFALCKECKKEFFDEKNPRFLYPFITCTHCGPRFSIIKSLPYDRAHTSMQELLMCEF
                     CKSEYEDPKNRRFHAQPISCPKCKINVFLKNPKGEILAKDQEAFIQSAKFLKEGKILA
                     IKGMGGFHLMCDAFNEEALKTLRLRKNRPKKPFALMCKDLQSAKELAFIDEKEEALLG
                     GVLAPIVILKAKKAFSLIAPDVDKIGIMLAYTPLHLLLFEYFKGSLVATSANLSGESI
                     IKDEFNLRQKLDKVFDFYLDYDREIINASDDSIAQVVNGKTMFLRTSRGLNPFYLERN
                     FNKKGTFLALGAELKNEFVIFYENKLLISPYIGDLKSLDVHERFFKLLEFFKQNYDLK
                     FDAILCDKHPHFSYAKEFEERIKISHHYAHFCAAYFEYEENFAKDEKALAFICDGTGY
                     GEDGKIWGGEVFVGNLKEYERIAHFENFTLINSDIKNIQNLALSLIFHYDLEDKAKEF
                     LAKIPKIELENLKKIYSHSNLQTSSLGRIIDAFGSIVFNLEKSSYEAQVGLMCEAFYD
                     KNLDFSYKLFVEKGQVNFKNLILGALQDEKTKAITGMFNALANFIIDFSKDYDLKVLL
                     SGGVFQNKTLLEILKAKNFDFFIPLKYPCNDSSIALGQMVHFLKKE"
     gene            5793..6536
                     /gene="hypB"
                     /locus_tag="RJ318_001297"
     CDS             5793..6536
                     /gene="hypB"
                     /locus_tag="RJ318_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HDV7431158.1"
                     /translation="MCKDCGCSINSSHTHDHHHDHHHENPSLKESKTIEVISKILSKN
                     DEEAKHNRAHFNEANTLCINLMSSPGSGKTTLLESTIKALKNELKIAVIEGDLETNND
                     AIRVKNAGALAYQITTGQSCHLDAFMVHEALHHLAIDDVDLLFIENVGNLVCPASYDL
                     GEHLNVVLLSVTEGSDKPQKYPVMFKKADIVLITKADLAHHFDFDVKEATRLIKELNP
                     RADIITLDAKNGTNMELWYKVLKLKKELF"
     gene            6536..6817
                     /locus_tag="RJ318_001298"
     CDS             6536..6817
                     /locus_tag="RJ318_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HDV7431159.1"
                     /translation="MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYV
                     LIHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIKSDEGDLGLNEFHR"
     gene            6801..7892
                     /gene="hypD"
                     /locus_tag="RJ318_001299"
     CDS             6801..7892
                     /gene="hypD"
                     /locus_tag="RJ318_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HDV7431160.1"
                     /translation="MNFIDEFRDKESILALKKLIEQELKNPINIMEICGGHTHSIMKY
                     ALPSILPKEINFIHGPGCPVCVMPRVRIDTAIKLASMKDTIFCTLGDLLRVPGSEISL
                     LDLRAKGADVRALYSPLEVLEIAKQNLNKNIIFFAIGFETTTPMSALLLQKVIEEKIN
                     NVFFHINHITVPAPVEAIMNDENVKINAFLGPSHVSVITGYGIYEPLAAKFKTPIAVS
                     GFEPVDILESVLNIIKQSNEGTFKVYNQYKRAVSKEGNVKAQNLVKKYFRVCDFEFRG
                     LGLIKNGGLELKEEFSAYDASKKFDCTVQSKNESKACICGQILRGLAKPYDCKVFGKA
                     CTPRSPIGSCMVSGEGACAAYYKYSKVNA"
     gene            7889..8863
                     /gene="hypE"
                     /locus_tag="RJ318_001300"
     CDS             7889..8863
                     /gene="hypE"
                     /locus_tag="RJ318_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HDV7431161.1"
                     /translation="MKNISLAHGGGGEEMNELLTKLFKIFDNEILNANNDAAILGNLA
                     LSTDSFVLSPIFLDEEVNIGKLCVCGSINDVLMVGAKPKYLSLGLILEEGFELEKLER
                     ILKSIKEECEKCGVMLVCGDTKVVPKGKADEIYINTTALGEIISKKESKNIKAGLSIL
                     LSGDIGRHGASVLIKRNELEADIKSDCKALDKEVLELLEKDIKVVAMRDATRGGLSAV
                     LNEWAKQSGNDLLIFEEKIIVQDEVLGLCELFGYEAYELANEGTFILCVEKEDGLKAL
                     EILKKYNVNASIIGEVLEEKKARVILQNAYGAKRFLESPKGELLPRIC"
     gene            8863..9207
                     /gene="hypA"
                     /locus_tag="RJ318_001301"
     CDS             8863..9207
                     /gene="hypA"
                     /locus_tag="RJ318_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HDV7431162.1"
                     /translation="MHELSIVESLIELCEENALNNKAYNVQEIYVKIGRLSGIEVDLF
                     KRCFETFKENSNICKNAKLFIELAPLEILCLKCDQTSILEENVFKCPKCQSIEYKITQ
                     GEDLHLMRLVME"
BASE COUNT         3204 a         1092 c         1772 g         3170 t
ORIGIN      
        1 gtagaattgt tttttaaaag aaatatttaa aaaaagagat aagataatat catggcaaaa
       61 aaacaactct ctttaacaag acttagtttt cctatatttt gggatttgct ttctaagtat
      121 ttaaccgtga ttatcaatac cgctatggtg tcgcattatt ctaattttct tgtcggtgct
      181 atgggggctg gaaatcaaat tttagatctt tttatcacta ttttttcatt tttaagtgtg
      241 ggttgtagtg tggtgatcgc acaagcaatt ggtgcaaaag atcatgtttt agcaagaaaa
      301 gtgattcatc aaagtttgtt cttaaatgca cttttaggct ttgtatgcgg tgtgcttatt
      361 ttatggcacg gggagtattt gctttatctt ttaaaaatcc cacaagaatt gctcaaagat
      421 agcgaaattt acttacatat gcttgcaatt tgtttgtttt ttgatgccat aggaattgtt
      481 ttagctgcta ttgtaagggt ttataatatg gcttattggg tcatgcttat aggttttttg
      541 atggatatag tggtgatttg tggaaattat tatgttttgc attatacaaa atcagaactt
      601 tttggagtag ggcttagtaa tatttttgcc cgtattgttg ctatagtggc tttacttgtg
      661 atactttttt ataaacttaa aattcatctt aaaatcaaag aaatgataaa acttgaaaaa
      721 gaggtattaa aaaaggtttt aaatataggc ggattttcag caggggaaaa tcttttgtgg
      781 atagtccaat acactatagc ctttgctttt gtagcaagct taggtgaagc aagcttgagt
      841 gtacaaacga tttattttca aatttcaatg cttatcatgc ttataggaca agctacgagc
      901 atagctaatg aaattatagt aggtaaatta gtcggtgcta gatatgaaaa tatcgcttat
      961 aaacatgctt ggcgtgcttt atattttagc gtaatagcga gtgctttagt agcgcttttg
     1021 aactatcttt gtcaagattt tactatgcaa attttagggc ttaaagaaga gttaaaaaat
     1081 ttaatgatac ctttatttgc tctttcaatc tttcttgaaa tttcacgcac ttttaatata
     1141 gtcatggtta attccttgcg cgcaagtggc gatgctaagt ttccattttt tagtggactt
     1201 gtttttatga tgggggtatc tttacctgtg ggttatgtgc tttgttttca ttttaatctt
     1261 ggaattttag gggtttggat aggattttgt gcggatgagt ttttgcgtgg aatggtaaat
     1321 tcatacagat ggaaaagtaa aaaatggcaa ggcaaagctc tagtttaaaa tcttttattt
     1381 ataaagatga gtgctatttt tattctaaaa aacgcataaa aactttaaga ttaaggatca
     1441 atgaaagggg tgaatttgtt cttagcattc cttatttttg cacctttaaa agcgtttatg
     1501 agtttttaga taaatcaagt tcttggatga atgaggcaaa aaaaagattt gaaaaaaaag
     1561 ttttaaaaga tgatgagtta atctttttag ctaaaaaata taaaattatt tttgatgaaa
     1621 atgtcaaaaa aacttatttt gataaagata aaataatttg tcaaaataaa gcaaaattag
     1681 atttattttt aagacaaaat gctaaaaaga tttttacttt ttatcttaaa aaatggagtc
     1741 aaaaaacagg tttattttac acgcacttaa gcattaaaaa tatgaaaacg cgttggggtt
     1801 catgtaatca caataaagct tatattaatt taaatttaaa actcattcaa aagagtttaa
     1861 gggctattga atatgtgatt ttgcatgaaa tatgccactt aaaatttccc aatcatagca
     1921 aagaatttta cgattttatt gagtatttta tgagtgattt taggcaaaga gagaaagaat
     1981 ttttaagtta aaaatgttat atttatagtt tatttttcaa aaaaggcata atatgacttt
     2041 ggattttgat tttatttata atgcggataa tgatattttt gaatatttat tgcgttttta
     2101 tgcgaaaaat tataattaca cccttagtaa agaagaaaat acttatcatt tttctatcga
     2161 tgcagatgaa gaaaatttaa agactttttg tgattctttg aatttaatga gtcatagcgt
     2221 ttttttgaaa aaatttgatg taaaagcggg acaagatttt aacccttgta taccagaaga
     2281 taaagaattt tcaaaatttt cttatattac tcatttaaat tctaatgcct atcaagaaaa
     2341 aaaactttta aacaaaaatg aatggggtgt gttttgtgag tgtgaatttt caagcaattt
     2401 atcagaattt gaaaaaatca atgaagaaaa tttcaatact tttttaaatc ttgcttttga
     2461 tttgttaagt caagaaaaaa agatttattt aaaagataaa aatggcattt atgaattttc
     2521 tttgtttaag aacgaattta taggagattt tttacttcct tgtgatatta aagctataaa
     2581 ttcagttttt gtttgttcaa atgaaaattt aaaacttctt gcaagtttgg aaaaaccttt
     2641 gatgaagcta aggcttaatg ctatgtttag aaaaaatcac aatcttgatt ttagtgattt
     2701 taaaatcaga cttgctagag atttgttttg ttttgcttta ggtttgaaac tttttgaaaa
     2761 tgagtataaa tttttaagcg taaaaaagat agaagaatat caaaaagatt tttatatcag
     2821 tgctttagat gagcaagtgg tggttttgga aggctttgaa tttatcaatg ctaaggcaag
     2881 agagcttatt ttttctaaag aagataaaaa tatggcaaga atttcttatc ttgtaagccg
     2941 ttataaagaa aaggctttta ttttagagct aagtaaagat gatgaagata ttttgcttat
     3001 caacaaagag cttaatttgc ttaaactttg cttaccaaaa cacagcaaag agctttatga
     3061 agagatcaaa aaagatgaaa ttggtgcaag gcttttagaa aattttagca aggaatttcc
     3121 tcttttagat gaaaattttg agcttcaaaa caatttttat tccttgtttg gcttagtagg
     3181 aagagtgcta aatttgggta aaaatttaca agagagtgtt agcgagcttt taaaaatcgc
     3241 tgatgagtca aaaatgcctc gtggagtaaa gattgattat cgtttgaaag aagataaaag
     3301 ttttgattat acaagaactt taagatctgc tatgagtttt atgttagcag gtgtagatag
     3361 tgctaatatc gcttatggag cggttgagag tttggcttat ttcttgcgtg atacttatga
     3421 tgaattaaga gagaaaaagc aaagtgactt agcgcttata agtggctctt tgtttgaaca
     3481 taaatcttta cttaaaaata ctttaaaaca tcttaaaaat tgtcagttaa gcgatgtgcc
     3541 acttaggata taagatcaaa atttcaggtc tagttcaagg ggtgggtttt cgccccttag
     3601 tttatgaact agctttgaaa tcaaagcttt ttggagaagt aagaaatgat ggttttgggg
     3661 tagaaatcat ccttgcttgc actcaaaaag aatgtgaaaa tttcatagaa aatttaaaaa
     3721 atcatctccc gcctttagca agaatagatc agcttataat cacgcaaatt tctatttcaa
     3781 actatgaaaa ttttagcatt actccttctt tagagaatac aaaaagcacg cctatgttaa
     3841 gcgattttgc gctttgtaag gagtgtaaaa aagaattttt tgatgaaaaa aatccacgct
     3901 ttttgtatcc ctttatcact tgcacacatt gtgggccacg ctttagtatt ataaaaagtc
     3961 ttccttatga tagagcccat acttccatgc aagaattatt gatgtgtgag ttttgtaaaa
     4021 gcgaatacga agatcctaaa aataggcgtt ttcatgccca gcctattagt tgtcctaagt
     4081 gtaaaatcaa tgtttttctt aaaaatccaa agggtgaaat tttagccaaa gatcaagaag
     4141 cttttataca aagtgcgaag tttttaaagg aaggtaaaat tttagccatt aaaggcatgg
     4201 gcggttttca tctcatgtgt gatgctttta atgaagaagc tttaaaaact ctaagactta
     4261 gaaaaaatcg ccctaaaaaa ccttttgctt tgatgtgtaa agatttacaa agtgctaaag
     4321 aacttgcctt tatagatgaa aaagaagaag ctttgcttgg tggggtttta gctcctattg
     4381 tgattttaaa ggcaaaaaaa gccttttctt taatcgctcc tgatgttgat aaaatcggca
     4441 ttatgttagc ttatacacct ttacatcttt tgctttttga gtattttaaa ggaagccttg
     4501 tagcaacgag tgcaaattta agcggagaaa gtatcattaa agatgagttt aatttgcgtc
     4561 aaaaacttga taaagttttt gatttttatt tggattatga tagggaaatt atcaatgcaa
     4621 gtgatgacag catagctcaa gtggtaaatg gcaaaactat gtttttgcgt acttcaaggg
     4681 gtttaaatcc cttttatttg gaaagaaatt ttaataaaaa aggcactttt ttagctttgg
     4741 gtgcggaact taaaaatgaa tttgtgattt tttatgaaaa taaactttta atttctcctt
     4801 atatagggga tttgaaaagt cttgatgtgc atgagagatt ttttaaactt ttagaatttt
     4861 ttaaacaaaa ttatgatttg aaatttgatg cgattttgtg cgataaacac ccgcatttta
     4921 gctatgcaaa agaatttgaa gaaaggatta aaatttctca tcattatgcg catttttgtg
     4981 cggcttattt tgaatacgaa gaaaattttg caaaagatga aaaggcttta gcttttattt
     5041 gtgatggaac aggttatggc gaagatggta aaatttgggg tggagaagtt tttgtaggaa
     5101 atttaaaaga atatgaaaga attgcacatt ttgaaaattt cactcttata aatagtgata
     5161 ttaaaaatat acaaaattta gccttaagtc ttatttttca ttatgattta gaagataagg
     5221 ctaaggagtt tttagcaaaa attccaaaaa ttgaacttga aaatcttaaa aaaatttatt
     5281 cacattctaa cttacaaacg agttctttag gacgcattat cgatgctttt ggaagtattg
     5341 tttttaactt agaaaaaagt tcttatgaag ctcaagttgg cttaatgtgt gaagcttttt
     5401 atgataaaaa tcttgatttt tcttacaagc tttttgtaga aaaagggcag gttaatttta
     5461 aaaatttaat cctaggggct ttacaagatg aaaaaactaa ggcaattaca ggtatgttta
     5521 atgccttggc aaattttatc atagatttta gcaaagatta tgatttaaaa gtgcttttaa
     5581 gtggaggagt ttttcaaaac aaaaccttac ttgaaatttt aaaagctaaa aattttgatt
     5641 tttttatacc tttaaaatac ccttgcaatg atagctccat agctttagga caaatggtgc
     5701 attttttaaa aaaagagtga ttttatcttt aaactcataa ttttttaatg cttttaaggt
     5761 taaaatgaaa caaaaaatat aaaggaaaga aaatgtgtaa agattgcggc tgctctataa
     5821 attcaagcca tacgcatgat catcatcacg atcaccacca tgaaaatcca agtttaaaag
     5881 aaagtaaaac catagaagta atttctaaaa ttttaagcaa aaatgatgaa gaagctaaac
     5941 acaatagagc gcattttaat gaggctaaca cgctttgtat caatttaatg agttctccag
     6001 gtagcggaaa aaccacgctt ttagaaagca cgatcaaggc tttgaaaaat gaacttaaaa
     6061 ttgctgtgat tgaaggggat ttagaaacca ataatgacgc tataagagta aaaaatgccg
     6121 gagctttggc gtatcaaatc actacagggc aaagctgtca tttggatgct tttatggtgc
     6181 atgaggcttt gcatcattta gccattgatg atgtggattt gctttttata gaaaatgttg
     6241 gaaatttggt ttgtcctgca agttatgatt taggagagca tttaaatgtg gttttgcttt
     6301 cggtaactga aggaagtgat aaaccgcaaa aataccctgt gatgtttaaa aaggctgata
     6361 tagttttaat cacaaaggca gatttggctc atcattttga ttttgatgtt aaagaggcga
     6421 ctaggttgat taaagaatta aatcctagag cagatattat cactcttgat gcaaaaaatg
     6481 gcaccaatat ggagctttgg tataaggtgc ttaaacttaa aaaggagctt ttttaatgtg
     6541 tttgtctata ccttctgaaa ttttagaaat cgatgagtta aacaatgctt tagtgcaaac
     6601 tttaggtgtg aaaagaaaag ttaatttgga tttgattgat gagcctttaa aacaaggcga
     6661 ttatgtgtta atccatgtag gcgttgctat ggaaaaaatc gacaaagaag ctgcactaga
     6721 aagcattaaa acctatcaag aaatagtaga aaaaatgaat agtggagaga taaaaagtga
     6781 tgaaggagat ttgggtttaa atgaatttca tcgatgaatt tagagataaa gaaagcattt
     6841 tagctttaaa aaaactcata gaacaagaac ttaaaaatcc tatcaatatc atggaaattt
     6901 gcggtgggca tacgcatagt atcatgaaat atgctttgcc ttctattttg ccaaaggaaa
     6961 ttaactttat ccatgggcca ggatgtcctg tttgtgttat gccaagagtt cgcattgata
     7021 cagctattaa gctagcctcc atgaaagata cgattttttg tactttagga gatcttttaa
     7081 gggtgcctgg aagtgaaatt tctctgcttg atttaagagc taaaggggct gatgttagag
     7141 cgctttattc tccgcttgag gttttggaaa tcgctaagca aaatttaaac aaaaatatca
     7201 tcttttttgc tataggtttt gaaaccacta cgcctatgag tgctttactt cttcaaaagg
     7261 ttatagaaga aaaaataaat aatgtctttt ttcatatcaa tcatatcacg gttccagcac
     7321 ctgtggaagc gatcatgaat gatgaaaatg taaaaatcaa tgctttttta ggcccttctc
     7381 atgtgagtgt gataacaggt tatggtattt atgagccttt agcagcaaag tttaaaaccc
     7441 ctatagcggt gagtggtttt gagccagttg atattttaga aagtgtgtta aatatcataa
     7501 aacaaagcaa tgaaggcact tttaaagtgt ataatcaata caaaagagcc gtaagcaaag
     7561 aaggcaatgt taaagcacaa aatttagtaa aaaaatactt tagggtgtgt gattttgaat
     7621 ttcgtggctt aggacttatt aaaaatggag gcttggagtt aaaagaagaa tttagcgctt
     7681 acgatgcgag taaaaaattt gattgtacgg tgcaaagtaa aaatgaaagc aaagcctgta
     7741 tttgtgggca aattttaaga ggtttggcca agccttatga ttgtaaagtt tttggcaagg
     7801 cttgtacgcc aagaagtcct ataggaagtt gtatggtttc tggcgagggt gcttgtgcgg
     7861 cgtattataa atactcaaag gtgaatgcat gaaaaatatt tccttagccc acggaggcgg
     7921 tggagaagag atgaatgagc ttttaactaa gctttttaag atctttgata atgaaatttt
     7981 aaacgcaaat aatgatgcag cgattttggg aaatttggct ttaagcacgg attcttttgt
     8041 tttaagtccg atttttttag atgaagaggt taatataggt aaactttgtg tttgtggttc
     8101 tattaatgat gttttgatgg tgggtgctaa gccaaaatat ctaagcttag ggcttatctt
     8161 agaagaaggt tttgagctag aaaaattaga acgtatttta aaaagcatta aagaagaatg
     8221 tgaaaaatgt ggagttatgt tagtttgtgg cgatactaaa gttgttccta agggtaaagc
     8281 agatgaaatt tatatcaaca ctacagcctt aggtgaaatt atttctaaaa aagaaagtaa
     8341 aaatatcaaa gcagggctta gcatacttct ttcaggtgat ataggaaggc atggagctag
     8401 tgttttaatc aaaagaaatg agttagaagc tgatattaaa agtgattgca aggctttaga
     8461 taaagaggtt ttagagcttt tagaaaaaga tataaaggtt gtagcaatga gagatgctac
     8521 tcgtggggga cttagtgcgg ttttaaatga gtgggcaaag caaagtggaa atgatctttt
     8581 gatctttgaa gaaaaaatca tcgttcaaga tgaggtttta ggactttgcg agctttttgg
     8641 ttatgaagcc tatgagcttg caaatgaagg cacttttata ctttgtgtgg aaaaagaaga
     8701 tgggttaaaa gccttggaaa ttctaaaaaa atacaatgta aatgcgagta ttataggaga
     8761 agttttagaa gagaaaaaag cacgcgtgat cttacaaaac gcttatggag caaaacgctt
     8821 tttagaaagc cctaaaggcg aacttttacc aagaatttgc taatgcacga attaagtata
     8881 gtagaatctt taatcgaact ttgtgaagaa aatgccttaa acaataaggc ttacaatgtg
     8941 caagaaattt atgtaaaaat cgggcgttta agcggtatag aagtggatct ttttaagcgt
     9001 tgttttgaaa cttttaaaga aaactcaaat atttgtaaaa atgctaaact ttttatagaa
     9061 cttgccccac ttgaaatttt atgcttaaaa tgcgatcaaa caagcatttt agaagaaaat
     9121 gtttttaagt gtcctaaatg tcaaagtata gaatacaaaa tcacacaagg tgaggacttg
     9181 caccttatgc gacttgtgat ggagtgagat aataaattta gaaacattgt tttttgtt
//
LOCUS       DAPIYB010000065         9167 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.066, whole genome shotgun sequence.
ACCESSION   DAPIYB010000065 DAPIYB010000000
VERSION     DAPIYB010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9167)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9167)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9167
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.066"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            20..1141
                     /locus_tag="RJ318_001302"
     CDS             20..1141
                     /locus_tag="RJ318_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl sugar amidotransferase"
                     /protein_id="HDV7431163.1"
                     /translation="MIYCDHCVMPNTRPGINFTKDKEGKNICSACINHKNKENIDYKA
                     RFKELEVLCDKYRRMNGKFEYDCAIAVSGGKDSHFQVHIMKEKLGMNPILFSVEDNFT
                     MTEAGKKNLKNLSETFGCHIISLKPDIKTQKKVMLKTFEKYGKPTWFIDRLIYSYPFA
                     MALKFNTPLLVYGENVSYEYGGSDAKETPSAKEIFLNGVASDLNINEFIDDEIKEENL
                     QLFFNPNANDINKLNPIYLSYFIKWNSYSNYIFAKSRGFTDLEGEWYRTMCAENFDQV
                     DSIGYILHAWMKYPKFGHACASDYTARFVRYGLLNRKEAIELVQKRDHKLDNKCVEDF
                     CNFIGISKTTFWKIVEKHYNMDLFYKNDFGEFKLKNKLQ"
     gene            1159..1834
                     /locus_tag="RJ318_001303"
                     /pseudo
     CDS             1159..1834
                     /locus_tag="RJ318_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344715.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
     gene            1874..2878
                     /gene="legI"
                     /locus_tag="RJ318_001304"
     CDS             1874..2878
                     /gene="legI"
                     /locus_tag="RJ318_001304"
                     /EC_number="2.5.1.101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,N'-diacetyllegionaminate synthase"
                     /protein_id="HDV7431164.1"
                     /translation="MKKTLIIAEAGVNHNGDLNLAKKLIEIAADSGADFVKFQSFKAK
                     NCISTKAKKAPYQLKTTANDESQLQMVQKLELDLKAHKELILHAKKCNIAFLSTPFDL
                     ESVDLLNELGLKIFKIPSGEITNLPYLKKIAKLNKKIILSTGMANLGEIEEALNVLCK
                     NGAKRQNITLLHCTTEYPAPFNEVNLKAMQSLKDAFKLDVGYSDHTRGIHISLAAVAL
                     GACVIEKHFTLDKNMSGPDHKASLEPQELKMLCTQIRQIQKAMGDGIKKASKSEQKNI
                     NIVRKSLVAKKDIKKGEIFSEGNLTTKRPANGISAMRYEEFLGKIATKNYKEDELIRE
                     "
     gene            2871..4025
                     /gene="legG"
                     /locus_tag="RJ318_001305"
     CDS             2871..4025
                     /gene="legG"
                     /locus_tag="RJ318_001305"
                     /EC_number="3.2.1.184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-N,N'-diacetylbacillosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HDV7431165.1"
                     /translation="MSKRKICIVSATRAEWYLLRNLCHEIQNDKDLSLQIIATGAHLS
                     PEFGLTYKEIEKEFKITKKIPILLANDDKISLCKSMSLAFSAFSDAFEDLKPDMVVIL
                     GDRYEMLSVASVCLLMHIPLVHLCGGELTLGAIDDSIRHSISKMSHLHFVSHEIYKKR
                     LLQLGEEEKRVFNIGSLASTIIKNMNFLNKKDLEKALEMKLDKELYLITYHPLTLNVK
                     NTQKEIKTLLKKLDTLKNASLIFTKANADENGLLINEILQNYCQKNSHKAKLFDNLGS
                     QKYLSLMKIAKAMIGNSSSGISESPFFKTPCINIGDRQKGRLRTQNIIDSEINDLDQA
                     FEKLESKEFKQNLKNFKNPYDNGKNPNKIIKTCLKNVNLDTILHKNFIDL"
     gene            4034..5059
                     /locus_tag="RJ318_001306"
     CDS             4034..5059
                     /locus_tag="RJ318_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HDV7431166.1"
                     /translation="MDINKLKLTPDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISD
                     SNIRKALISGKTLKDSIKDIYTKNPITIKENTSKEQLLKISAKTDIYDFPVLDEKGQI
                     LSIKSISSLLKANPNSIIIMAGGLGSRLKELTKDTPKPMLKVGKKPILESIIQRLKNQ
                     NFENFIFCVNYKKQIIEDYFQKGQKFGVKISYIKERKKLGTAGALSLIKQEFKESFIV
                     MNADILTELDFNALLKAHKKSKALMSVCVREFEQQIPYGVITQKQGFIENIEEKPTQK
                     FLVSAGIYVLENEILNLIAKNEYLDMPELIKLVLQKGKVNTYIINDYWIDIGRPDEFL
                     KANEDFK"
     gene            5056..5961
                     /gene="ptmF"
                     /locus_tag="RJ318_001307"
     CDS             5056..5961
                     /gene="ptmF"
                     /locus_tag="RJ318_001307"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glutamine-D-fructose-6-phosphate isomerase
                     subunit"
                     /protein_id="HDV7431167.1"
                     /translation="MKVLIIGFGSIGKKHFLALKNLNHEVSLLSLSAKKEEFKNTPIY
                     RSLKECDLNEFDLFIIANITTEHFNTLKTLDELVKDKTILVEKPLFEKSQNFTSSKNH
                     IYVAYLQRFNPVIVALKKLLKGEKIYFASLVCNSYLPHWRALDYRQNYSAKKELGGGV
                     LLDLSHEIDLAFFLFKDLELMYSQNAKISELDITSDDFAFLALKNSQEAKIHIELDYF
                     AKFNKREIIIHTLEKSFKADLINNKIEIYHKNQSQKILNFENDTIKTLQNLHHAVFEK
                     DKELCDLKQALKVLELCDEVRKKNG"
     gene            5954..6661
                     /gene="legF"
                     /locus_tag="RJ318_001308"
                     /gene_synonym="ptmB"
     CDS             5954..6661
                     /gene="legF"
                     /locus_tag="RJ318_001308"
                     /gene_synonym="ptmB"
                     /EC_number="2.7.7.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N,N'-diacetyllegionaminic acid synthase"
                     /protein_id="HDV7431168.1"
                     /translation="MAEILCTICARGGSKGVKNKNIRKINELEMIAYSIIQAQNSKLF
                     KHIVISTDSDEIASVAQKYGAEVFFKREAHLANDRTAKLPVMRDALLRSEEHFKTCFE
                     TLIDLDASAPLRSSLDIKKAYESFVENDNSNLITAVPARRNPYFNLVEIQNNKVVKSK
                     EGNFTTRQSAPKCYDMNASIYIFKRDYLLENDSVFGKNTGLFVMDESTAFDIDSELDF
                     KIVEFLISLKNLSPKDF"
     gene            6661..7431
                     /gene="ptmA"
                     /locus_tag="RJ318_001309"
     CDS             6661..7431
                     /gene="ptmA"
                     /locus_tag="RJ318_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin modification protein PtmA"
                     /protein_id="HDV7431169.1"
                     /translation="MLENKIIFVAGACGRIGKALCEKILLSKGIPILADINKECLNKL
                     QENLETNFKTKLLSLELDITKQESLQTALQKSQERYGKIDAFVNSSYPFGKDWGKTPY
                     YELKYEQICESLNLHLAGFMLAAQEFVKFFKQQGYGNIINLSSIMGVYAPKFENYEGT
                     SMQSSLEYSVIKAGINHMSSWLAKELFNQNIRVNTLASGGILDNQNELFLKAYRKCCA
                     SKGMLDADDICGTLVFLLSDESKFITGQTLVVDDGWGL"
     gene            7419..>9167
                     /gene="pseD"
                     /locus_tag="RJ318_001310"
     CDS             7419..>9167
                     /gene="pseD"
                     /locus_tag="RJ318_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin modification protein PseD"
                     /protein_id="HDV7431170.1"
                     /translation="MGLMMTFTPTQKELFNKNIEALSNLFLKESLKEIKSSKFELILG
                     KDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ
                     NKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIELFSNFCSSKPFF
                     QFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDSILSHGNDPLDALQGIEQFVYNL
                     PQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPIL
                     AKHNIKPDYVLSLERIPLTSEFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFM
                     LVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSH
                     TKDYSNLDKHEGHFQRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYI
                     TTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKV
                     YQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENETLIKEIIKDIDKIKTQIDELYNT
                     QKDLMQILGPLLTQFEL"
BASE COUNT         3529 a         1296 c         1469 g         2873 t
ORIGIN      
        1 aaattgatag ggatggggaa tgatttattg tgatcactgc gtgatgccaa atactagacc
       61 tggtattaat tttacaaaag ataaagaagg taaaaatatc tgttcagctt gcatcaatca
      121 taaaaataaa gaaaatattg attataaagc aaggtttaaa gagcttgaag tcttatgcga
      181 taaataccgc agaatgaatg gaaaatttga atatgattgc gctattgccg taagtggagg
      241 taaagattcg cattttcaag tgcatatcat gaaagaaaaa cttggaatga atcctattct
      301 ttttagcgtt gaagataatt tcaccatgac tgaagcaggt aagaaaaatc ttaaaaattt
      361 aagtgaaact tttggttgtc atattattag cttaaagcct gatatcaaaa ctcaaaaaaa
      421 agttatgcta aaaacctttg aaaaatatgg aaaacctact tggtttattg atagactgat
      481 ttacagctat ccttttgcta tggctttaaa atttaataca cctttattgg tttatggaga
      541 aaatgttagt tatgaatatg gaggtagtga tgccaaagaa actcctagcg ccaaagaaat
      601 atttttaaat ggcgtagcta gtgatttaaa tataaatgaa tttatagatg atgaaatcaa
      661 agaagaaaat ctacaactct tttttaatcc caatgcaaat gatatcaaca aacttaatcc
      721 tatttatcta agttatttta taaaatggaa ttcttatagc aattatattt ttgctaaaag
      781 tcgtggtttt actgatctag aaggcgaatg gtatagaaca atgtgtgcag aaaattttga
      841 tcaagttgat agtataggct atatcctaca cgcttggatg aaatacccta aatttggtca
      901 tgcttgtgcg agtgattaca cagctcgttt cgtgcgatat ggacttttaa atagaaaaga
      961 agctattgaa cttgtacaaa aaagagatca taagcttgac aataaatgcg ttgaagattt
     1021 ttgcaatttc ataggtatta gtaaaactac attttggaaa atagtagaaa aacattacaa
     1081 tatggattta ttttataaaa atgattttgg agaatttaaa ttaaaaaaca aattacaata
     1141 aaaatataaa ggaaagaaat gcaaaactca ttagaaactt atacaatgaa atataatgaa
     1201 aatggatacg gattactttt tccagatggt catgtagtac gtttttatga aagaatttta
     1261 aaatacaaac taaataaaat aaatggaaat ttacttgatt ttggttgtgg caatggtgta
     1321 cattcagcgt attttcaaag caaagggttt aaaacttttg gaatagatat agttccaagt
     1381 ttaaaagaaa tttgggagca aaatattagc gggggggggg tattgtaaaa ttatagaacc
     1441 aaattctagc atcaaaggac tttttgatga aaatatggat attatctttg caaatcaaag
     1501 tctttactac atacctctaa aagaacttaa acaaaatatt ttagaatttt acgaactttt
     1561 gaacacaggt ggaatacttt ttgctacaat gatgagcaag aaaaattatt atttttccca
     1621 cagtcaaaaa gaagaaaaaa atggcttgag taaagttgaa attaatggaa gattaaatga
     1681 aacaagcttt atacatttca tcgataaagc cgaagatcta gaaaatcttt ttcaaccttt
     1741 tgaaacttta tttctaggag attatgatcc tattaatttt tataattttg aaggatcggc
     1801 acaccattat atttatatag gtattaaaaa ataaaatttt gcctttattt taaggcaaaa
     1861 taaaggcaaa actatgaaaa aaactttaat catcgcagaa gcaggagtta atcacaatgg
     1921 tgatttaaat ttagctaaaa agttaataga aatcgcagca gattcaggag ctgattttgt
     1981 taaatttcaa agttttaaag ccaaaaactg tatcagcaca aaggctaaaa aagcacccta
     2041 tcagcttaaa accacggcta atgatgaaag tcagcttcaa atggtgcaaa aactcgaact
     2101 cgatcttaaa gctcataaag agcttatctt acacgcaaaa aaatgcaata tcgcctttct
     2161 ttctactcct tttgatcttg aaagtgtaga tcttttaaat gagttaggct taaaaatctt
     2221 taaaattcca agcggagaaa tcaccaatct accctatctt aaaaaaattg caaagcttaa
     2281 taaaaaaatc atactttcaa caggcatggc aaatttaggc gagatagaag aagctttaaa
     2341 tgtgctttgc aaaaatggcg ctaaacgcca aaatatcact cttttacact gcactacaga
     2401 ataccctgcc ccttttaatg aagtcaatct taaagccatg caaagcttaa aagacgcttt
     2461 taagcttgat gtgggttatt ctgatcacac aaggggtata cacatttccc tagctgcggt
     2521 tgccttggga gcttgtgtga tagaaaagca ttttactcta gacaaaaata tgtcagggcc
     2581 tgatcataaa gcaagcctag aacctcaaga actaaaaatg ctttgtaccc aaataagaca
     2641 aatacaaaag gcaatgggtg atggcataaa aaaagcaagt aaaagcgaac aaaaaaatat
     2701 caacatagta agaaaaagtt tagtggccaa aaaagacatc aaaaaaggag aaatttttag
     2761 cgaaggaaat cttactacca aacgccccgc aaatggtata agtgctatga gatatgaaga
     2821 gtttttgggt aagattgcta ctaaaaacta caaagaagat gagcttatcc gtgagtaaaa
     2881 gaaaaatttg tatagtcagt gcaacaaggg ctgaatggta tcttttaaga aatttatgtc
     2941 atgaaattca aaacgataaa gatctaagcc ttcaaatcat cgctacagga gcacatttaa
     3001 gccctgagtt tggactcact tataaagaaa tagaaaaaga atttaaaata actaaaaaaa
     3061 tccctatcct gcttgcaaac gatgataaaa taagcctttg taaaagtatg agtttagctt
     3121 ttagtgcttt tagcgatgct tttgaagact taaaacctga tatggtggtg attttaggcg
     3181 atcgttatga aatgcttagc gtagcaagtg tatgtctatt gatgcacata cctttagtgc
     3241 atttatgtgg cggggagctt actttagggg ctattgatga tagtataaga cacagcattt
     3301 caaaaatgtc acatttacat tttgtaagtc atgaaattta taaaaaaaga cttttgcaac
     3361 ttggagaaga agaaaaaagg gtttttaata taggttcttt agcttctact atcataaaaa
     3421 atatgaattt tttaaacaaa aaagatttag aaaaagcctt agaaatgaaa ctagataaag
     3481 aactttactt aatcacttat catcctttaa ctttaaatgt aaaaaatact caaaaagaga
     3541 ttaaaacctt acttaaaaaa cttgacaccc ttaaaaatgc aagtttgatt tttaccaaag
     3601 caaatgccga tgaaaatgga cttttaatca atgaaatttt gcaaaattac tgccaaaaaa
     3661 actcacacaa ggctaaactt tttgataatc ttggctcaca aaaataccta agtcttatga
     3721 aaatagccaa ggccatgata ggcaattctt caagtggtat tagtgaaagt ccttttttta
     3781 aaactccttg cattaatata ggcgatagac aaaaagggcg tttaagaact caaaatatca
     3841 ttgattccga aatcaacgat cttgatcaag cttttgaaaa attagaaagc aaagaattta
     3901 aacaaaattt aaaaaatttt aaaaaccctt atgataatgg taaaaatccc aataaaatca
     3961 taaaaacttg cctaaaaaat gtaaatttag atacaatttt acataaaaat ttcatcgatt
     4021 tataaggctt agtgtggata taaacaaact caaactcacc cctgattcta gcataaaaga
     4081 agctttaaaa atagtcgggc aagaacgcgt tagattaggc attatagttg ataaaaagga
     4141 taaattttta ggagtcatta gcgattcaaa catcagaaaa gctttaatta gtggcaaaac
     4201 tttaaaagat agtatcaaag atatttacac taaaaatccc atcaccataa aagaaaacac
     4261 aagcaaagaa cagcttttaa aaatttctgc taaaaccgat atttacgact ttcctgtttt
     4321 agatgaaaaa gggcaaattc tttctataaa atctatctca tcacttttaa aagccaatcc
     4381 aaactccatt atcatcatgg ctggaggctt aggctctcgc ttaaaagagc tgactaaaga
     4441 tactccaaaa cctatgttaa aagtaggcaa aaaacccatt ttagaaagca taatccaaag
     4501 acttaaaaat caaaattttg aaaattttat cttttgtgtg aattataaaa aacaaatcat
     4561 agaagattat tttcaaaaag ggcaaaaatt tggggttaaa atttcttata ttaaagagcg
     4621 taaaaaacta ggtacagcag gggctttaag ccttataaaa caagaattta aagaaagttt
     4681 tatcgttatg aatgcagaca ttttaaccga gctggatttt aatgctcttt taaaagcgca
     4741 taaaaaatca aaagctttaa tgagcgtttg cgtgcgtgag tttgagcaac aaattcctta
     4801 tggagtgatc actcaaaaac aaggttttat agaaaatata gaagaaaaac ctacccaaaa
     4861 attcctagta agtgcgggga tttatgtact tgaaaatgaa attttaaatt taattgctaa
     4921 aaatgaatac ttagacatgc ccgaactcat caaacttgta ttgcaaaaag gcaaggtaaa
     4981 tacctatatc atcaacgatt attggattga cattggaagg ccagatgagt ttttaaaagc
     5041 caatgaggat tttaaatgaa agtcttaatc ataggctttg gaagcatagg aaaaaagcat
     5101 tttttagcct taaaaaattt aaatcatgaa gtaagtttgc tttctttaag tgctaaaaaa
     5161 gaagaattta aaaacactcc aatttatcgc tctttgaaag aatgtgattt aaacgaattt
     5221 gatcttttta tcatcgcaaa tatcactacg gagcatttta acaccttaaa aactttagat
     5281 gagcttgtaa aagataaaac catactcgta gaaaaacctt tatttgaaaa aagccaaaat
     5341 ttcacaagct caaaaaatca catttatgta gcatatttac aacgttttaa tcctgtgatt
     5401 gtcgctttaa aaaagctttt aaaaggtgaa aaaatttatt ttgctagttt ggtttgtaat
     5461 tcttatttgc cccattggag agctttagac tacaggcaaa attacagcgc taaaaaagag
     5521 ctaggtggtg gggttttact cgatctctct catgaaatcg atctagcctt ttttcttttt
     5581 aaagacttag agcttatgta ctcccaaaat gctaaaattt cagagcttga cataacaagc
     5641 gatgattttg cctttttggc tttaaaaaat tcacaagaag ctaaaattca tatagaacta
     5701 gactattttg ctaaatttaa caaaagagaa attatcatcc atactttaga aaaaagcttt
     5761 aaagccgatt tgataaacaa taaaatcgaa atttatcaca aaaatcaaag tcaaaaaatc
     5821 ttaaattttg aaaatgatac gataaaaacc cttcaaaatt tacatcatgc agtctttgaa
     5881 aaagacaaag aactttgcga tcttaagcag gctttaaaag tgcttgaact ttgtgatgaa
     5941 gtaaggaaaa aaaatggctg aaattttatg tactatttgt gctaggggtg gtagcaaagg
     6001 cgttaaaaac aaaaatatta gaaagattaa cgaacttgaa atgatagctt atagcatcat
     6061 acaagctcaa aattcaaagc tttttaaaca catagtcata agtactgata gtgatgaaat
     6121 cgcaagtgta gcccaaaaat atggcgctga agtttttttc aaaagagaag ctcatcttgc
     6181 caatgatcgg actgcaaaac ttcctgtcat gcgtgatgcc ttgctaagaa gtgaagagca
     6241 ttttaaaacg tgttttgaaa ctctcataga cttagatgct tcagccccgc ttcgctcaag
     6301 ccttgatata aaaaaagctt atgaaagttt tgttgaaaat gataattcca atctcatcac
     6361 cgcagttcct gctagacgca atccttattt taacctcgta gaaatacaaa ataacaaggt
     6421 agtaaaatcc aaagaaggaa attttaccac tcgccaaagt gccccaaaat gctatgatat
     6481 gaacgctagt atttatatct ttaaaaggga ttatctttta gaaaatgata gtgtttttgg
     6541 caaaaacaca gggctttttg taatggatga aagcacagct tttgatattg atagcgagct
     6601 tgattttaaa atcgtagagt ttttaatctc tttaaaaaat ttatcgccaa aggattttta
     6661 atgcttgaaa ataaaatcat ctttgtagca ggagcttgtg ggcgtatagg taaagcgctt
     6721 tgcgaaaaaa tacttcttag caaaggtatc cctatactcg cagatatcaa caaagaatgc
     6781 ttaaataaat tgcaagaaaa tttagaaaca aattttaaaa caaaactttt aagcttagaa
     6841 cttgatatca ctaaacaaga aagcttacaa accgcccttc aaaaaagtca agaaagatac
     6901 ggcaaaatcg atgcttttgt taactcaagc tatccttttg gcaaagattg gggtaaaacg
     6961 ccttattatg aactcaaata cgaacaaatt tgcgaaagtt taaatttaca tttagcaggc
     7021 tttatgctag ccgctcaaga atttgtgaaa ttttttaaac aacaaggcta tggtaatatc
     7081 atcaatctta gctccatcat gggagtttat gcgccaaaat ttgaaaacta tgaaggcact
     7141 tccatgcaaa gctctttaga atacagtgtg ataaaagcag ggattaatca catgagctct
     7201 tggctagcta aagagctttt taatcaaaac atacgcgtta atactctagc aagcggagga
     7261 attttggata atcaaaatga acttttttta aaagcttata gaaaatgttg tgcgagtaaa
     7321 ggtatgctag atgcagatga tatatgtgga actttggtat ttttacttag cgatgagagt
     7381 aaatttatca cagggcaaac tttagtggta gatgatggat ggggcttatg atgaccttca
     7441 cccctactca aaaagaactc tttaataaaa acattgaagc tttaagtaat ctttttttaa
     7501 aagaaagttt aaaagaaatt aaatcaagta aatttgaact tatcttaggt aaagataatc
     7561 tagatatcaa tttaaaagat acaagtgata atacttttct ttatgaaaat gttattgatg
     7621 aattaaactc tatgctaaat acttataatg ataaatatct actttatcct gtattgtatt
     7681 tttatggttt tggaaatgga attttattta aagctttatt gcaaaataaa aatcatcaac
     7741 atattgttgt ttttgaaaaa gatatagaaa tcatttggat aatgtttcat atcttagatt
     7801 tttcacatga attacaaagt gcaagattga tgattttgca aacaagttct ttggatatag
     7861 aattgttttc taatttttgc tctagcaaac ctttctttca attttctaga atttattttt
     7921 tagaactgat gagtcattat tatgaaagat ttcatgagga tgttttggag ttaaataaaa
     7981 agctagtgca agattttaaa gattccattc tttcccatgg taatgatcct cttgatgctc
     8041 ttcaaggcat agaacaattt gtttataact tacctcaaat gatcactcat cctagttata
     8101 aagaattact ttctaaaaga aagggtataa gtgatacagc tatcattgtt tctacaggac
     8161 catctcttac taaacaattg cctttattaa aaaagtatgc tagtaaagct acgatttttt
     8221 gtgcggattc ttcttatcct attttagcta agcataatat taagcccgat tatgtgcttt
     8281 ctttggaaag gattccttta acttctgaat tttttaacaa tgattttggg gaatttgata
     8341 aggatatttt gtttgttcta aaatcctatg tccaccctca tactacaaaa tatcttcaaa
     8401 aaaataatag aaattttatg cttgtatcta catatgcaag ttttataaat tatttaaaac
     8461 ttgatgattt tgggtatttt aatatgggat ttagtgtagc taatatgaat tttttacttg
     8521 ctatacattt aaagcataaa aatatcgttt taataggaca agatttagct tatgctaaag
     8581 atggactttc tcacactaaa gattatagca atcttgataa acatgaagga cattttcaaa
     8641 gagataaaaa caaatatacc actcaagctt acggagacaa tggaaaagtt gaaagttctt
     8701 ttgtttggac tctttttaga cataattttg aacaagatgt ggccaatgca aaaaaaaatt
     8761 attatattac cacctacaac tgtaccgaag gtggagcaag gatagaagga actatagaaa
     8821 aacctttttt atgggcttgt gagaatttac ttcataaaga tttaaataaa ccttttgaaa
     8881 aattagaacc tttaagttta aataaacaaa atgagttttt acttaaggct tattataaag
     8941 tttatcaaag tattaaacat tgtagagatt ttagtaataa atttattaaa agctatgata
     9001 aaataaaaaa ttcttttatg agtttacaaa attctcaaga aaatgaaacc cttatcaaag
     9061 agatcattaa agatatagat aaaatcaaaa ctcaaatcga tgagctttat aatactcaaa
     9121 aagatttgat gcaaatttta ggtcccctac taactcaatt tgaactt
//
LOCUS       DAPIYB010000066         9099 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.067, whole genome shotgun sequence.
ACCESSION   DAPIYB010000066 DAPIYB010000000
VERSION     DAPIYB010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9099
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.067"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            585..3491
                     /locus_tag="RJ318_001311"
     rRNA            585..3491
                     /locus_tag="RJ318_001311"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            3727..3843
                     /gene="rrf"
                     /locus_tag="RJ318_001312"
     rRNA            3727..3843
                     /gene="rrf"
                     /locus_tag="RJ318_001312"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(4039..5247)
                     /locus_tag="RJ318_001313"
     CDS             complement(4039..5247)
                     /locus_tag="RJ318_001313"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDV7431171.1"
                     /translation="MKISLFGYGKTTRAIAENLVDKFGPFDIYDDHFTETKKDTLGNL
                     LLNPNDFDDNLSDIEIPSPGFPPKHKLIQKAKNLQSEYDFFYDIMPKSVWISGTNGKT
                     TTTQMATHLLSHIGAVMGGNVGTPLAELNPYAKLWILETSSFTLHYTHKAKPEIYALL
                     PISPDHLSWHGSFDNYVQDKLSVLKRMNECDVVILPKIYANTPTKAHKISYEDEKDLA
                     VKFGIDTEKISFKSPFLLDAIMALAIEKILLDTLSYKLLNSFVMEKNKLEELKDSQNR
                     LWVNDTKATNESAVMAALSRYKDKKIHLIIGGDDKGVDLSNLFDFMKGFDIELYAIGI
                     STEKMLDYAKKANLKAYKCEVLSKAVNEISNHLRVNEVALLSPACASLDQFNSYAERG
                     KVFKECVNKI"
     gene            complement(5247..6308)
                     /locus_tag="RJ318_001314"
     CDS             complement(5247..6308)
                     /locus_tag="RJ318_001314"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDV7431172.1"
                     /translation="MYYLSDLSHYAFFTYISVRAGFAFFIALCLSLFLMPKFITWAKA
                     KNASQPIYEYAPETHKTKCHTPTMGGLIFISSAVIASLFCIKFDNIFAISALLCLILF
                     CLIGLIDDLGKVLKKDNHSGLSPRMKLLAQIIAGLICILPLYFSSELSTELFIPFYKH
                     PLFDMEIFAIAFWILVLISSSNAVNLTDGLDGLATVPGIFSLSTLGIFLYLSGNLNYS
                     EYLLLPKIQGLGEVVIICAALIGALMGFLWYNCYPAQVFMGDSGSLALGGFIGFLAVI
                     SKNEILLLLIGFVFVLETVSVILQVGSFKIFNKRVFKMAPIHHHFEKVGWVENKIIVR
                     FWMIALLSNLLALASIKLR"
     gene            6388..7866
                     /locus_tag="RJ318_001315"
     CDS             6388..7866
                     /locus_tag="RJ318_001315"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HDV7431173.1"
                     /translation="MKQKCVLIITDGIGYNKNSKFNAFEAAKKPSYEKLFKEVPNSLL
                     KTSGLAVGLPEGQMGNSEVGHMCIGSGRIIYQNLVRINKAIENKELEKNENLKKLLAK
                     CKRVHIIGLYSDGGVHSMDTHFKAMLEICAKNGNEVFAHAITDGRDVSPKSGLNFIKD
                     LKEFCENLGVHFATLCGRFYAMDRDKRWDRVKEYYECLLGKAYKVPNLLEYLQKSYDE
                     NVTDEFIKAAQNENYKGMREEDGIIFINFRNDRMKQLVEVLNSKDFKEFEREKIFENL
                     LTMSVYDDKFKLPVLFEKEKIENTLAQVISKAGLSQLHTAETEKYAHVTFFFNGGKEE
                     LLENETRVLIPSPKVKTYDEKPQMSAFEVCDAVKKGIEKGEDFIVVNFANGDMVGHTG
                     DFNATIKAVEAVDTCLGEILECAKKHDYAFIITSDHGNCEAMQDEKGNLLTNHTTFDV
                     FVFVQARGVSKIKDNMGLSNIAASVLKILDLEIPKEMNEALF"
     gene            7938..8681
                     /gene="fabG"
                     /locus_tag="RJ318_001316"
     CDS             7938..8681
                     /gene="fabG"
                     /locus_tag="RJ318_001316"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDV7431174.1"
                     /translation="MKFSGKNVLITGASKGIGASIAKTLAGFGLKVWINYRSKPELAD
                     ALKDEIIASGGVAAVIKFDASKEDEFENGVKTIVESDGELSYLVNNAGVTNDKLALRM
                     KLEDFSGVVDTNLSSAFLGCREALKTMSKKRFGAVVNIASIVGEMGNAGQVNYSASKG
                     GMIAMTKSFAKEGASRNLRFNCVTPGFIKSDMTEVLSNEIKQTYQDNIPLKRFAEPEE
                     VANCVAFLLSDYASYVTGDVLKINGGLYM"
     gene            8688..9098
                     /locus_tag="RJ318_001317"
     CDS             8688..9098
                     /locus_tag="RJ318_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDV7431175.1"
                     /translation="MMDLKEIAQFLDDNAPAFLATLGTCGNPRVRPIQSPLLVGDKIY
                     FCTANTKGLFKHIKNYNDIEFCSCAKDGTFLRLRANAVFEPNLEVKKMMFKKYPYLVN
                     LYETPQNPKFEVFYLDHLSARMQFMNGEFKLFKA"
BASE COUNT         3089 a         1396 c         1893 g         2721 t
ORIGIN      
        1 acccctgata agggtgaggt cacaagttca agtcttgtta ggcccaccat aaaaaagatt
       61 tgaataaaga agctttaaaa tctaaagcaa gtatataaaa tagattaaat ataaaatata
      121 aactctatac ttagatttat tttttatctt taactataaa agaatatact ttaatagata
      181 taagtagcat atacattatg catttatatt tataatgatt atgttaatat atatacttcc
      241 tttaggtttt aaacctaaat gttcttttta attatcattg ttaagagtca caagcaagtt
      301 ttaataaaaa caattttaca ggacttgtta aaggataaaa cctatttatc ttttctttag
      361 tttaacttaa cttttagctg tctttatttc tatgaataaa gagaatattg gatttaagga
      421 ttataaatta aagacaagtt tcaaactcac agcttagttg agactaaatc atttagtttt
      481 atattaagtg tttgaatgct ttccgtctta agataaagaa gtcttatcat aaaaacttta
      541 acaaggaagt gatgcgtttt agaatcaata ataaaaggta aaaaaggtaa gctactaaga
      601 gcgaatggtg gatgccttga ctggtaaagg cgatgaagga cgtactagac tgcgataagc
      661 tacggggagc tgtcaagaag ctttgatccg tagatttccg aatggggcaa cccaatgtat
      721 agagatatac attacctata taggagcgaa cgaggggaat tgaaacatct tagtactctc
      781 aggaaaagaa atcaatagag attgcgtcag tagcggcgag cgaaagcgca agagggcaaa
      841 cccagtgctt gcactggggg ttgtaggact gcaatgtgca agaggtaagt ttagcagaac
      901 attctggaaa gtataaccat agagggtgat agtcccgtat gcgaaaaaca aaccttagct
      961 agcagtatcc tgagtagggc gggacacgag gaatcctgtc tgaatccggg tcgaccacga
     1021 tccaacccta aatactaata ccagatcgat agtgcacaag taccgtgagg gaaaggtgaa
     1081 aagaactgag gtgatcagag tgaaatagaa cctgaaacca tttgcttaca atcattcaga
     1141 gccctatgta gcaatacagg gtgatggact gccttttgca taatgagcct gcgagttgtg
     1201 gtgtctggca aggttaagca aacgcgaagc cgtagcgaaa gcgagtctga atagggcgct
     1261 tagtcagatg ctgcagaccc gaaacgaagt gatctatcca tgagcaagtt gaagctagtg
     1321 taagaactag tggaggactg aacccatagg cgttgaaaag ccccgggatg acttgtggat
     1381 aggggtgaaa ggccaatcaa acttcgtgat agctggttct ctccgaaata tatttaggta
     1441 tagcgttgtg tcgtaatata agggggtaga gcactgaatg ggctagggca tacaccaatg
     1501 taccaaaccc tatcaaactc cgaatacctt atatgtaatc acagcagtca ggcggcgagt
     1561 gataaaatcc gtcgtcaaga gggaaacaac ccagactacc agctaaggtc cctaaatctt
     1621 acttaagtgg aaaacgatgt gaagttactt aaacaaccag gaggttggct tagaagcagc
     1681 catcctttaa agaaagcgta atagctcact ggtctagtga ttttgcgcgg aaaatataac
     1741 ggggctaaag taagtaccga agctgtagac ttagtttact aagtggtagg agagcgttct
     1801 atttgcgtcg aaggtatacc ggtaaggagt gctggagcga atagaagtga gcatgcaggc
     1861 atgagtagcg ataattaatg tgagaatcat taacgccgta aacccaaggt ttcctacgcg
     1921 atgctcgtca tcgtagggtt agtcgggtcc taagtcgagt ccgaaagggg tagacgatgg
     1981 caaattggtt aatattccaa taccaacatt agtgtgcgat ggaaggacgc ttagggctaa
     2041 gggggctagc ggatggaagt gctagtctaa ggtcgtagga ggttatacag gcaaatccgt
     2101 ataacaatac tccgagaact gaaaggcttt ttgaagtctt cggatggata gaagaacccc
     2161 tgatgccgtc gagccaagaa aagtttctaa gtttagctaa tgttgcccgt accgtaaacc
     2221 gacacaggtg ggtgggatga gtattctaag gcgcgtggaa gaactctctt taaggaactc
     2281 tgcaaaatag caccgtatct tcggtataag gtgtggttag ctttgtatta ggatttactc
     2341 cgaaagcaag gaaacttaca acaaagagtc cctcccgact gtttaccaaa aacacagcac
     2401 tctgctaact cgtaagagga tgtatagggt gtgacgcctg cccggtgctc gaaggttaat
     2461 tgatggggtt agcattagcg aagctcttga tcgaagcccg agtaaacggc ggccgtaact
     2521 ataacggtcc taaggtagcg aaattccttg tcggttaaat accgacctgc atgaatggcg
     2581 taacgagatg ggagctgtct caaagaggga tccagtgaaa ttgtagtgga ggtgaaaatt
     2641 cctcctaccc gcggcaagac ggaaagaccc cgtggacctt tactacagct tgacactgct
     2701 acttggataa gaatgtgcag gataggtggg aggctttgag tatatgacgc cagttgtata
     2761 tgagccattg ttgagatacc actctttctt atttgggtag ctaaccagct tgagttatcc
     2821 tcaagtggga caatgtctgg tgggtagttt gactggggcg gtcgcctccc aaataataac
     2881 ggaggcttac aaaggttggc tcagaacggt tggaaatcgt tcgtagagta taaaggtata
     2941 agccagctta actgcaagac atacaagtca agcagagacg aaagtcggtc ttagtgatcc
     3001 ggtggttctg tgtggaaggg ccatcgctca aaggataaaa ggtaccccgg ggataacagg
     3061 ctgatctccc ccaagagctc acatcgacgg ggaggtttgg cacctcgatg tcggctcatc
     3121 gcatcctggg gctggagcag gtcccaaggg tatggctgtt cgccatttaa agcggtacgc
     3181 gagctgggtt cagaacgtcg tgagacagtt cggtccctat ctgccgtggg cgtaagaaga
     3241 ttgaagagat ttgaccctag tacgagagga ccgggttgaa caaaccactg gtgtagctgt
     3301 tgttctgcca agagcatcgc agcgtagcta agtttggaaa ggataaacgc tgaaagcatc
     3361 taagcgtgaa gccaactcta agatgaatct tctctaagct ctctagaaga ctactagttt
     3421 gataggctgg gtgtgtaatg gatgaaagtc ctttagctga ccagtactaa tagagcgttt
     3481 ggcttatctt taataaagca tcacttcctt gttaaggttt ttaagaagac tttgaatata
     3541 gataatattt agagtttaat agaaatcttt caagtagagt ttgtattaga acttgctctt
     3601 aacattgttt tttaagtatt ctatataaaa acttatcaaa gataaaagat aagaaaagaa
     3661 gaaagagaat aaaagattaa gttttattct taaattcaat ttttcaaaga atatttaaat
     3721 aacaatgtcc gtgattatac agatgtggaa acgccttgct ccatcccgaa ccaagaagct
     3781 aagcacatcg tgggtgatga tactacgcct tactggcagg gggaaagtag ctcattgcgg
     3841 acttgttaaa tgtcttcatt acttacttta tatataaatc ctatgtttat ttttattgtt
     3901 gttttagatg atacttagaa tcgtgtttaa aaaagagttt gctgctggtt agggttttta
     3961 gagagaatag ggtgttttta ggggtttgaa aatactagaa ggataaaatt taaaattttc
     4021 tatgaaaagt aaaataaatt aaattttatt cacacattct ttaaagactt ttccacgctc
     4081 tgcgtaagag ttgaactgat ctaaacttgc acaagcggga cttaaaagag ctacttcatt
     4141 gactcttaag tgatttgaaa tttcattcac agctttagat aaaacttcgc atttataggc
     4201 tttcaaattc gctttttttg cataatcaag cattttttcg gtactaatac ctatagcata
     4261 gagttctata tcaaatcctt tcataaaatc aaataaattg ctaagatcta cacccttatc
     4321 atctccccct atgataagat ggattttttt atctttatag cgactaagtg cagccattac
     4381 agcactttca tttgtagctt tagtgtcatt tacccaaagc ctattttgac tgtctttaag
     4441 ctcttcgagt ttattttttt ccattacaaa gctatttaaa agcttatagc ttaaagtatc
     4501 aagtaaaatt ttttctatag ctaaagccat gatagcatcg agtaaaaaag gacttttaaa
     4561 ggaaattttt tccgtatcaa tgccaaattt aacagctaga tctttttcat cttcatagct
     4621 tattttatga gcttttgttg gagtatttgc ataaatttta ggcagtatta ctacatcaca
     4681 ttcattcatt ctttttaaaa cgcttagctt atcttgaaca taattatcaa aacttccatg
     4741 ccaagaaaga tgatcaggac ttataggtaa aagtgcataa atttcaggtt tagctttatg
     4801 agtgtagtgt agggtaaaag atgaagtttc aagtatccaa agttttgcat aaggattaag
     4861 ctctgctaaa ggagttccaa catttccacc cataacagca ccaatgtgtg ataataaatg
     4921 tgtagccatt tgtgtggtgg tggttttgcc attggttccg cttatccaaa cggattttgg
     4981 catgatatca taaaaaaagt catattcgct ttgtaaattt tttgcttttt gaatgagttt
     5041 gtgctttggt ggaaaacctg gactaggaat ttcaatatcg cttaaattat catcaaaatc
     5101 attaggattt aaaagtaaat ttcctagtgt atcttttttt gtttctgtaa aatgatcatc
     5161 ataaatatca aaaggtccaa atttatctac taaattttca gcaatagcac gtgtggtttt
     5221 tccgtatcca aaaagtgaaa ttttcattat cttagcttta ttgatgcaag tgcaagcaaa
     5281 tttgaaagta aggctatcat ccaaaaacgc actataattt tattttccac ccagccaact
     5341 ttttcaaaat gatgatgaat aggcgccatt ttaaatactc ttttattaaa aattttaaaa
     5401 cttccaactt gtaaaattac agaaacagtt tcaagaacaa aaacaaaacc tatgagtaaa
     5461 agtaaaattt catttttgct aataacggct aaaaatccta taaagccacc taaagctaaa
     5521 cttccactat ctcccataaa aacttgtgca ggataacagt tgtaccataa aaatcccatt
     5581 aaagcaccaa ttagcgctgc acaaataatc actacttcac caagtccttg aatttttggc
     5641 aaaagtagat attcactata atttaaattt ccactcaaat ataagaatat ccctaaagta
     5701 gataaagaaa aaatgcctgg aactgtagct aagccatcaa gtccatcggt taaatttaca
     5761 gcattagagc tagaaattaa aaccaaaatc caaaaagcaa tggcaaaaat ttccatatca
     5821 aaaagagggt gtttataaaa aggtataaaa agttccgtgc taagctctga actaaaatat
     5881 aaaggtaaga tgcagataag tccagcgatg atttgtgcta aaagcttcat tcttggacta
     5941 agtcctgaat gattatcttt ttttagaact ttgcctaaat catctatgag tcctatcaaa
     6001 caaaaaagta tcaaacaaag taaagcactt atagcaaaaa tattatcaaa tttgatacaa
     6061 aataaacttg cgattactgc agaactgatg aaaataagcc cacccatggt tggagtatgg
     6121 catttggttt tatgagtttc tggggcgtat tcgtaaatag gttgactagc atttttagct
     6181 tttgcccaag taataaattt aggcattaaa aataaagaca aacataaagc gataaaaaat
     6241 gcaaatcctg cacgcacact aatataagta aaaaaagcat aatgacttaa atctgaaaga
     6301 taatacaaaa cctagccttc tttttggttt ttaaaagttt aattttagta aaatctaacc
     6361 aaaaaaattc ttataaaaga gagaaaaatg aagcaaaaat gcgttttaat tattacagat
     6421 ggaatagggt ataataagaa tagtaagttt aatgcttttg aagcagctaa aaaaccaagt
     6481 tatgaaaagc tttttaagga agtcccaaat tctttactaa aaacgagtgg tttagctgta
     6541 ggtttgccag aagggcagat gggaaatagt gaagtagggc atatgtgtat aggaagtggg
     6601 cgtattattt atcaaaattt agtgcgtatt aataaagcca ttgaaaacaa agaacttgaa
     6661 aaaaatgaga atttaaaaaa acttttagca aaatgtaaaa gagtgcatat tatagggctt
     6721 tatagtgatg gcggggtaca ttctatggat acgcatttta aagccatgct tgaaatttgt
     6781 gcgaaaaatg gcaatgaagt ttttgctcac gcaatcactg atgggcgtga tgtaagtcca
     6841 aaaagtggct taaatttcat aaaagattta aaagaatttt gtgaaaactt aggcgtgcat
     6901 tttgctacgc tttgtgggcg tttttatgct atggatagag ataagcgttg ggatagggta
     6961 aaagagtatt atgagtgctt gttaggtaag gcttataaag tgccaaattt attagaatac
     7021 ctacaaaaat cttacgatga aaatgttact gatgagttta tcaaagcagc tcaaaatgag
     7081 aattacaagg gcatgagaga agaagatggc attatcttta tcaactttag aaatgataga
     7141 atgaaacaac ttgttgaagt gttaaattct aaggatttta aagagtttga acgcgaaaaa
     7201 atctttgaaa atttacttac tatgagtgtt tatgatgata aatttaaact ccctgtgctt
     7261 tttgaaaaag aaaaaattga aaatacttta gcgcaagtga tttctaaagc agggcttagt
     7321 cagcttcata ccgcagaaac cgaaaaatac gcccatgtaa ctttcttttt taatggcgga
     7381 aaagaagagc ttttagaaaa tgaaacaagg gttttaatcc caagccccaa ggtaaaaact
     7441 tatgatgaaa aaccccaaat gagtgctttt gaagtgtgtg atgcagtgaa aaaaggcata
     7501 gaaaagggtg aggattttat agtggtaaat tttgcaaatg gagatatggt tggacataca
     7561 ggtgatttta atgctactat aaaggctgtt gaagcggtgg atacttgttt aggcgagatt
     7621 ttagaatgtg caaaaaagca tgattatgct tttatcatta caagtgatca tggaaattgc
     7681 gaggctatgc aagatgaaaa aggaaatttg cttaccaatc acaccacttt tgatgttttt
     7741 gtttttgtgc aagcaagggg agtttcaaag attaaagata atatggggct gagtaatata
     7801 gctgcaagcg tgcttaaaat tttagactta gaaattccaa aagaaatgaa tgaggcttta
     7861 ttttagtttg tttgcctttt ttataagaaa tttgttaaga ttgcaatttt taaaattaaa
     7921 cttattaagg atagataatg aaatttagtg gaaaaaatgt tttaattact ggagcaagta
     7981 agggaatagg tgcttctatc gcaaaaactt tggcaggttt tgggcttaaa gtttggatca
     8041 attatcgttc aaaacctgaa cttgcagatg ctttaaaaga tgaaattatt gcaagtggtg
     8101 gtgttgctgc tgtgattaaa tttgatgcaa gcaaagaaga tgagtttgaa aacggcgtaa
     8161 aaactatagt tgagagtgat ggagagttaa gttatcttgt aaataacgca ggcgttacaa
     8221 atgataaact tgctttaaga atgaaattag aggactttag tggcgttgtg gatacgaatt
     8281 taagctcagc ttttttaggt tgtagagaag ctttaaaaac catgagtaaa aaacgctttg
     8341 gtgctgttgt aaatatcgct tctattgtcg gagaaatggg caatgctggg caagtaaatt
     8401 attctgctag taagggtgga atgatagcta tgactaaatc ttttgctaaa gaaggagcaa
     8461 gtagaaattt acgctttaat tgcgtaactc caggttttat aaaaagcgat atgactgaag
     8521 ttttaagcaa tgaaatcaaa caaacctatc aagataatat ccctttaaaa cgctttgcag
     8581 agcctgaaga agtagctaat tgtgtagcgt ttttacttag tgattatgcc tcttatgtga
     8641 caggcgatgt gcttaagatc aatggtggtt tatatatgta aggaaaaatg atggatttaa
     8701 aagaaatagc acaattttta gatgataatg caccagcatt tttagccact ttaggaactt
     8761 gtggaaatcc tagagtgcgt cctatacaaa gtccattgct tgtgggagat aaaatttatt
     8821 tttgcacagc aaatacaaaa ggacttttta agcatataaa aaattataat gatattgaat
     8881 tttgttcttg tgcaaaagat gggacttttt taagacttag agctaatgcg gtttttgaac
     8941 caaatttaga agttaaaaaa atgatgttta aaaaatatcc ttatcttgta aatctttatg
     9001 aaactccgca aaatccaaaa tttgaagttt tttatcttga tcatttaagc gctagaatgc
     9061 aatttatgaa tggagaattt aagcttttta aggcttaat
//
LOCUS       DAPIYB010000067         8595 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.068, whole genome shotgun sequence.
ACCESSION   DAPIYB010000067 DAPIYB010000000
VERSION     DAPIYB010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8595
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.068"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            5..430
                     /gene="exbB"
                     /locus_tag="RJ318_001318"
     CDS             5..430
                     /gene="exbB"
                     /locus_tag="RJ318_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDV7431176.1"
                     /translation="MEFLKDYIDLIIFLILGIMAFIAFWCVVERMLFFRKINFKNYEN
                     QEQFDDAISENLTTIYIIYSNAPYIGLLGTVIGIMVTFYEMGLAGNIDVKSIVVGLSL
                     ALKATALGLLVAIPALMAYNALLRKVSLLSNAYKANKNA"
     gene            423..812
                     /gene="exbD"
                     /locus_tag="RJ318_001319"
     CDS             423..812
                     /gene="exbD"
                     /locus_tag="RJ318_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDV7431177.1"
                     /translation="MLKLPKNEGLNIVPFIDIMLVLLAIVLSISTFIAHGKIQISLPS
                     SENATNISNNEKKLLITIDEKNTFYLNDKLADLNEVQNAIFSLDKKTIVELKSDKNAK
                     FESFVKIIDFLKAKEHENFQILTEKNK"
     gene            809..1492
                     /locus_tag="RJ318_001320"
     CDS             809..1492
                     /locus_tag="RJ318_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDV7431178.1"
                     /translation="MKTLFLNHKYQTSYITFIVFIPLLFVIFHSNDFFKMEIKNEDSF
                     SLAIKQFTQTNPTNETKPTESIIEPIKPKPQPKVIKKTPEKMQKKIKKTPPHPIPNKT
                     PIAPTQEVKTFAKTTDTNVKPKITQLTQGKDNHPVLKEIQKAIQQAQFYPRQAKKMRM
                     QGTVKVEFLWKENKTLADLKIIEISGYDLLDKSALESIRKASLNFPHYNGDLRITLPI
                     IYDFKTLRG"
     gene            complement(1505..2373)
                     /locus_tag="RJ318_001321"
                     /pseudo
     CDS             complement(1505..2373)
                     /locus_tag="RJ318_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345000.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2377..2538)
                     /locus_tag="RJ318_001322"
     CDS             complement(2377..2538)
                     /locus_tag="RJ318_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431179.1"
                     /translation="MLKIILVLSILSSFAFANSCANYEQELKKCNSLKNSHERKMCRL
                     GLFAKCKKG"
     gene            2633..3616
                     /locus_tag="RJ318_001323"
     CDS             2633..3616
                     /locus_tag="RJ318_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MnmA/TRMU family protein"
                     /protein_id="HDV7431180.1"
                     /translation="MKALALFSGGLDSMLAMKLITAQGIEVKALNINIGFGSTSDKSE
                     IMKKRAAMVGADFEMIDVRNSYLQEVLFNPQYGYGKHFNPCIDCHAFMFKTALAMLKE
                     ENASFIITGEVLGQRPMSQRSDAMAKVKKLALDEEDLILRPMCAKNLPLTKPEREGWV
                     DREKLEGIIGRSRKRQLELAAKFGLEDFESPGGGCLLTLDSFAKKIRDFIEFDKDMQV
                     NDAQLLKYGRHLRLPNGAKMIIGRNELENTLLKGLKTPKYEAIEIGDLIGAYSLVDEK
                     ISEKDLELALKIALTYTKHEVGKSYELKFKNQAYTSIAFENKADINQFFIS"
     gene            complement(3702..4790)
                     /gene="aroC"
                     /locus_tag="RJ318_001324"
     CDS             complement(3702..4790)
                     /gene="aroC"
                     /locus_tag="RJ318_001324"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDV7431181.1"
                     /translation="MNTFGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELD
                     KRKGGSKFATPRKESDKAQVLSGVFEGYTTGHPIAIVVFNENAHSKDYDNLKDLFRPA
                     HADFTYFYKYGIRDHRGGGRSSARESVARVAGGAVAAMLLREFDICVQSGVFGVGTFV
                     SNLKEEEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSGMLIGL
                     GEVLYDKLDSKLAHALMGINAVKAVEIGEGINASKMRGSCNNDALKDGKFLSNHSGGI
                     LGGISNGENLILKTYFKPTPSIFAKQESIDKFGNNLKFELKGRHDPCVGVRGSVVASA
                     MVRLVLADCLLLNASANLNNLKNAYGLK"
     gene            complement(4790..5464)
                     /locus_tag="RJ318_001325"
     CDS             complement(4790..5464)
                     /locus_tag="RJ318_001325"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDV7431182.1"
                     /translation="MKNIEKLEQSLTYEFKDKNLLIHALTHKSFKKSYNNERLEFLGD
                     AVLDLVVGEYLFHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFILMSVAEENN
                     GGKEKPSILSDALEAIIGAIHLEAGFEFAKTIALRLIEKNFPQIDAKILIKDYKTKLQ
                     EITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKELARAIAGSKKEAQQMAAKIAL
                     EKLGAL"
     gene            complement(5451..5891)
                     /gene="rnhA"
                     /locus_tag="RJ318_001326"
     CDS             complement(5451..5891)
                     /gene="rnhA"
                     /locus_tag="RJ318_001326"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDV7431183.1"
                     /translation="MKHIEIYTDGSCLNNPGFGGWAYILRYKEYQKEGFGAEANTTNN
                     RMELMAIIESLKALKEPCEISLFTDSNLMVQSINEWLEGWIKKDFKGKKNIDLWKEYI
                     KVAKSHKIKAFWVKAHNGHLENERCDTLAREAALKIARENDEKH"
     gene            complement(5878..6864)
                     /locus_tag="RJ318_001327"
     CDS             complement(5878..6864)
                     /locus_tag="RJ318_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431184.1"
                     /translation="MDFFFVEYRDPLVGLIILTILVFVVAVANYIWKIFANKDEEQKL
                     EKFIKKFEMDNAHKELLRNSSLSFGNLSFLAEIFTKSGEFEKATQIYLIALEKCKDKQ
                     EREFIFLSLAKVYFKAGFLERAKEVLLQALKLRPRNIQALKLLKIVYLKLRSYKENLE
                     LLECLFELNEDVQKERDFIKALELCTFNITDEEKKKKLLEFKIEDNPMLGRLVFEKYH
                     MFLGQNFFDICDLLYRENEAFNLENQDFLEFFYALGKISKHDDTHQFVFKNSNFKMLK
                     ILKDNSFNAGLEFSYRCSECKNVMPLFFYHCPVCYEFNTCKIIYEVKNNETH"
     gene            6934..>8595
                     /locus_tag="RJ318_001328"
     CDS             6934..>8595
                     /locus_tag="RJ318_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDV7431185.1"
                     /translation="MITKESIENLSQRLNIVDIIENYIEVKKQGSSFVCICPFHADKN
                     PSMHINPIKGFYHCFACKAGGDAFKFVMDYEKLSFADAVEKVASLSNFTLSYTKEKQE
                     NKKELKSILPSLNAYFKDNLKHHKEVLTYLYQRALNDKDIAKFELGFAGASEDSIRLL
                     QNQKIPLEDAMSVGALKKDENNEFYASFIWRITFPIYDHKDLLVGFGGRTLNPNVPAK
                     YVNSPQNILFDKSRIFYAFNIAKENIAKKKEIIVCEGYMDAIAFHKAGFNNAVAVLGT
                     ALTEHHLPLIRRYDAKVILCFDNDEAGLKAATRSAFLLSTNKIDGKVAILQGGKDPAE
                     LVAKNESTKLHNILDEGIELGEFYIRRLISTHSIISALDKQKALETIQKFTFNLEPLV
                     ANSYTSLVSNLLKVDEKFIVLSQNSKKTIQTPLISQNKYNFPKEKIHIAELELIAFLK
                     QHPDICNDFKQISDSVCFKHKILLDKILEKKGYEDSDIREFESKNIRKNLNYSEFLLG
                     ICKVNLAFLNNVKIKNSTLALKKQLFTLIDKNLNLLIKNLNTAELN"
BASE COUNT         3106 a         1454 c         1102 g         2933 t
ORIGIN      
        1 aaatatggaa tttttaaaag attacatcga tttaattatc tttttaattc taggaattat
       61 ggcatttata gctttttggt gtgttgtaga aagaatgcta ttttttagaa aaattaactt
      121 taaaaattat gagaatcaag agcaatttga tgatgcgatt agtgaaaatt taaccactat
      181 atatatcatc tattccaatg ccccttatat aggactttta ggcactgtaa taggcatcat
      241 ggttacattt tacgaaatgg gcttagcggg caatatagat gtcaaatcta tagtcgtggg
      301 gctttcttta gctcttaaag ctacagcctt aggacttttg gttgctattc ctgctttaat
      361 ggcttataat gccttactta gaaaagtttc cctcttaagc aatgcttata aggcaaataa
      421 aaatgcttaa actaccaaaa aatgaaggtt taaatatagt cccatttata gacattatgc
      481 ttgttttgct tgctatagta cttagtattt caacctttat tgcgcatgga aaaattcaaa
      541 tctcacttcc ttcaagtgaa aatgctacca atataagcaa taatgaaaaa aaacttctta
      601 taaccataga cgaaaaaaat actttttatt taaatgataa attagctgat ttaaatgaag
      661 ttcaaaatgc tattttttca cttgataaaa aaaccatagt agaactaaaa agcgataaaa
      721 atgctaaatt tgaaagcttt gtaaaaatta tagatttttt aaaagccaaa gaacatgaaa
      781 attttcagat tcttactgag aaaaacaaat gaaaacttta tttttaaatc ataaatacca
      841 aacttcttat ataactttta tagtctttat acctttactt tttgtcattt ttcactcaaa
      901 tgactttttt aaaatggaaa ttaaaaatga agattctttt tctttagcaa taaaacaatt
      961 tacccaaact aatccaacaa atgagactaa accaacagaa tccattatag aacctatcaa
     1021 accaaaacct cagccaaaag ttattaaaaa aactcctgaa aaaatgcaaa aaaagataaa
     1081 aaaaacacct ccacacccaa taccaaataa aaccccaata gcaccaactc aagaagttaa
     1141 aacttttgca aaaacaactg atacaaatgt caaacctaag atcactcaat taacacaagg
     1201 aaaagataat caccctgtat taaaagaaat ccaaaaagct atacaacaag cacaatttta
     1261 tccaaggcaa gcaaaaaaaa tgcgtatgca aggaactgta aaagtagaat ttttatggaa
     1321 agaaaacaaa actttagcag atttaaaaat catagaaatc tcgggatatg atttgttaga
     1381 taaaagtgct ttagaaagca taagaaaagc ttctttaaat tttccacact ataatggaga
     1441 tttaagaatt acactaccta ttatatatga ttttaaaacc ctaagaggat aaaattataa
     1501 tttgctacac tctcttatct acaatttgtg cttcttgatt ttcaatttta ttttgaaaat
     1561 ctttacttaa attctgactt aattcttgca aagatttttg cttcagtttt tcaaattctt
     1621 caggattgct agcctcaagc tttgcctgct catcagcact taaagcactt aaaccttttt
     1681 cttgagcttt ttgaagcaaa tcttcgtctt ctttttcttt gatattattt tccttatcat
     1741 cttttttatt gattttttgc ggatctatgg ttttcatagc attagctcca ccacctgatg
     1801 cttctttaat gtcgcttaaa atttctctca tgctaggttc tttaacatca ctatcatcaa
     1861 ctttaccatc tttatttaca tctttatcaa taaaaaaatt taatttttct tctatatttg
     1921 catcatcaga tattttttca tcacttgttt taaagcctaa attttgcata ctttgttgaa
     1981 gggtacttgt attaaaattt aattttacac tttgttgttt attatttaaa tttgaattta
     2041 aagaaccaaa attatctttt acactttcaa accaatttga aacaaattga tttacttcgc
     2101 cattaagcct tatactacca tcatttctag caacataatt catataagaa ccgaaatttt
     2161 ttgtaaacta ctataatttt catcgcttaa atttaaagct ataagttcac cttgcttatt
     2221 ttcaaaaaca accttaacac catcgctatt taaactcgaa agatcttgca cgggaatttt
     2281 atcttgatct tcttttttta atacgctaag ctctttttta tcaacattat tagttaaaga
     2341 atgggttaaa ctagcagaag tatcgatttt cattatttat ccttttttac attttgcaaa
     2401 taaacctaaa cgacacattt ttctctcatg tgaatttttt aaagaattac actttttaag
     2461 ttcttgctcg tagttagcac aagaatttgc aaaagcaaaa gaactcaaaa tgcttaaaac
     2521 caaaattatt tttaacattt tccaatcctt attttaaaga ttttttagtt aaaattatac
     2581 cttttataat cgacaaaatc ttaaaaaact ttataatctc agaaaggaat caatgaaagc
     2641 attagctctt tttagcggtg ggcttgatag tatgcttgca atgaaactca tcactgcaca
     2701 aggcatagaa gttaaagctc taaatatcaa cataggtttt ggaagcacaa gtgataaaag
     2761 cgaaatcatg aaaaagcgtg cggcaatggt aggtgcagat tttgaaatga tagatgtaag
     2821 aaattcctat cttcaagaag tgctttttaa tccacaatat ggctatggca aacattttaa
     2881 tccttgtata gattgtcatg cttttatgtt taaaactgct cttgctatgt taaaagaaga
     2941 aaatgcaagt tttatcatca caggagaagt tttaggacaa cgccctatga gtcaaagaag
     3001 tgatgcaatg gcaaaggtta aaaaacttgc tcttgatgaa gaagatttaa tcttgcgtcc
     3061 tatgtgtgca aaaaacctac ctctaaccaa acctgaaaga gaaggttggg tagatagaga
     3121 aaaactcgaa ggtattattg gaagaagtcg taaaagacaa cttgaacttg cagctaaatt
     3181 tggcttagaa gactttgaaa gcccaggtgg aggttgtttg ctaactcttg atagttttgc
     3241 taaaaaaatt cgagatttca tagaatttga caaagatatg caggttaatg acgcacaact
     3301 tttaaaatat ggtcgtcatt taagattacc caatggagct aaaatgatca taggtagaaa
     3361 tgaacttgaa aatactcttt taaaaggttt aaaaactcct aaatatgaag caatagaaat
     3421 tggggattta atcggagctt actctttggt agatgaaaaa atttcagaaa aagacttaga
     3481 acttgcctta aaaatagccc ttacctatac taaacacgaa gtaggaaaaa gctatgaact
     3541 taaatttaaa aatcaagctt atacaagtat agcttttgaa aataaggctg atattaatca
     3601 attttttatt agttaaagta taaagtattt agcaaaacaa gcgatatagt atttgaatct
     3661 tttcaaaata ttgcaatcaa gcccatgaaa atgggctttt tttattttaa tccataagca
     3721 ttttttaaat tgtttaaatt cgcactcgca ttcaaaagca aacaatcagc caaaactaaa
     3781 cgtaccatag cactagctac aacacttcct ctaacaccta cacaaggatc atgcctacct
     3841 ttgagttcaa atttcaaatt attgccaaat ttatctatac tttcttgctt ggcaaaaata
     3901 gaaggagtag gtttaaaata agtttttaaa ataagatttt ctccatttga aattcctcct
     3961 aaaattcctc cgctatgatt gcttaaaaac ttgccatctt ttaaagcatc attattacac
     4021 gatccgcgca ttttgcttgc attaatacct tcgcctattt caactgcttt aacagcatta
     4081 attcccatta aagcatgagc taatttagag tctaacttat cataaagaac ttctccaagt
     4141 cctataagca taccactaac ttttgtaaaa acagcagcgc ctacgctatc ttttgaattt
     4201 ctagcattta aaatttcatt tttaaagtca ctttctagtt ttggatcaag gcaaaaaatt
     4261 tcacttttct tagcaaattc aaaatcaaat tcttcttctt tcaaatttga tacaaaagtt
     4321 cctactccaa aaacaccact ttgaacacaa atatcaaatt cacgcaaaag catcgctgca
     4381 actgcaccac cagccactct agcaacactt tccctagcgc ttgatctacc cccaccccta
     4441 tgatctctta tgccatattt ataaaaataa gtaaaatccg catgagcagg acgaaataga
     4501 tcttttaaat tatcataatc tttagaatga gcattttcat taaaaactac tatagctatg
     4561 ggatgacccg ttgtatatcc ttcaaaaacc ccgcttaaaa cctgagcttt atcgctttct
     4621 tttcttggtg ttgcaaattt acttccgcct ttgcgtttat caagctcatt ttgcaaaaat
     4681 tcttcatcaa atttaacccc agcaggcatt ccatcaataa tacatccaac agccacacca
     4741 tgagactcac caaaacttgt aaatttcaat ctcgtaccaa aggtattcac tataaagctc
     4801 ctaatttctc aagtgcaatt tttgctgcca tttgctgtgc ttcttttttg cttcctgcaa
     4861 tagctcttgc aagttcttta ccatcaagca ttaaagcaat ttcaaattgc tttaaatgat
     4921 cagggccaaa agcacgcact gtttcatact gcggagtttg tccgattttt ccctgtgtaa
     4981 tctcttgtaa ttttgtttta taatctttta taagaatttt tgcatcaatt tgagggaaat
     5041 ttttttctat aagccttaaa gcaatagttt ttgcaaactc gaacccagct tctaaatgta
     5101 tagcacctat aatggcttct aacgcatctg aaagtataga aggcttttct tttcctccat
     5161 tgttttcctc agcaacactc ataagaataa aatcgcccaa atttaaacta tttgcaattt
     5221 ttgcaaaaga cttttcattt actaaagctg ctctaagctt agataaatct ccttcggcat
     5281 ctttggcgaa tttatgaaaa aggtattcac ctacaactaa atcaagcacg gcatcaccta
     5341 aaaattccaa gcgttcgttg ttgtaagatt ttttaaaact tttatgggtt aaagcatgta
     5401 taagaagatt tttatcttta aattcataag ttaaactctg ctctagcttt tcaatgtttt
     5461 tcatcatttt cccttgcaat tttcaaagca gcttcacgcg ccaatgtatc acacctttca
     5521 ttttccaaat gtccattatg tgcttttacc caaaaagcct taatcttatg agattttgcc
     5581 actttaatat attccttcca taaatctata ttttttttac ctttaaaatc cttttttatc
     5641 catccttcta gccattcatt aatactttga accattaggt tagaatctgt aaaaagcgaa
     5701 atttcacaag gctcttttaa agccttcaaa gattcaataa ttgccattag ctccattcta
     5761 ttgttagtgg tattagcctc agctccaaaa ccttcctttt gatactcctt ataacgcaaa
     5821 atataagccc atccgccaaa acctggatta ttaagacatg agccatctgt ataaatttca
     5881 atgtgtttca ttgtttttca cttcataaat aattttacaa gtattaaact cataacaaac
     5941 aggacagtga taaaaaaaca aaggcattac atttttacac tcagaacaac gatatgaaaa
     6001 ttctaacccc gcattaaaag aattatcttt taaaattttt aacattttaa agttagaatt
     6061 tttaaaaaca aactggtgcg tatcatcatg ctttgaaatt ttacccaaag cataaaagaa
     6121 ttctaaaaaa tcttgatttt ctaaattaaa cgcttcattt tctctataaa gcaaatcaca
     6181 aatatcaaaa aaattttgcc ctaaaaacat atgatatttt tcaaaaacta aacgccccaa
     6241 cataggatta tcttctattt taaattctaa aagttttttc tttttttctt catcagtaat
     6301 attaaaagta caaagttcta aagctttgat aaaatcacgc tctttttgta catcttcatt
     6361 aagctcaaaa agacattcta aaagttctaa attttcttta taagaacgaa gttttaaata
     6421 aacaattttt aaaagtttta aggcttgtat atttcttgga cgcagtttta aagcttgtaa
     6481 taaaacttct tttgcacgct ctaaaaatcc tgctttaaaa taaacttttg ctaaagaaag
     6541 gaaaataaat tctctttctt gtttatcttt acatttttca agagcaatca aataaatttg
     6601 agttgctttt tcaaattccc cgcttttagt aaaaatttca gccaaaaaac ttaaatttcc
     6661 aaaactcaag ctactatttc ttaataactc tttatgagcg ttatccattt caaatttttt
     6721 tataaatttt tcaagctttt gttcttcatc tttgttagca aatattttcc aaatataatt
     6781 tgcaacagct acaacaaata ctaaaatggt taaaattata agccctacta aagggtctct
     6841 gtattctaca aagaaaaaat ccatagtctc gctctaaaaa ttttatgcca aattatagcc
     6901 aaatctttgt ataattttaa caaggtttgt aaaatgataa ctaaagaaag tatagaaaat
     6961 ttatcccaaa gacttaatat tgttgatatt atagaaaatt atattgaagt aaaaaaacaa
     7021 ggctctagtt ttgtatgtat ctgtcctttt catgcagata aaaacccgtc tatgcatatc
     7081 aatcctatca aaggttttta tcattgtttt gcctgcaagg ctggtggaga tgcttttaaa
     7141 tttgtaatgg attatgaaaa attaagtttt gctgatgcag ttgaaaaagt tgcaagcctt
     7201 agtaatttta ctttgagtta tacaaaagaa aaacaagaaa ataaaaaaga gctaaagtct
     7261 atactaccaa gcttaaatgc gtattttaaa gataatctca aacaccacaa agaagtttta
     7321 acctatcttt accagagagc tttaaatgac aaagatatag ccaaattcga attaggtttt
     7381 gcaggagcaa gtgaagatag tataagatta ttgcaaaatc aaaaaattcc tttagaagat
     7441 gctatgagtg ttggagcttt aaaaaaagat gaaaataatg aattttacgc aagttttata
     7501 tggcgtatca cctttccaat ctacgatcat aaagacttat tggtagggtt tggagggcgc
     7561 actttaaatc ccaatgtacc ggcaaagtat gtaaattcac cccaaaatat actttttgat
     7621 aaaagtagaa ttttttatgc ttttaacatc gctaaagaaa atatagccaa aaaaaaagaa
     7681 ataatagtat gtgaaggcta tatggatgca atagcttttc acaaagcagg gtttaacaat
     7741 gctgtagcag ttcttggaac agcattaacc gaacatcatc tacccttaat ccgccgttat
     7801 gatgcaaaag tgattttatg ttttgacaat gatgaagcag gattaaaagc tgcgacacga
     7861 tctgcatttt tattaagcac aaacaaaata gacggtaaag tggcaatttt gcaaggcgga
     7921 aaagatcctg ctgagctcgt agcaaaaaat gaaagcacaa aactccataa tatactcgat
     7981 gaaggaatag agcttggtga attttatatc agacgcttaa tatccactca ttccataatt
     8041 tctgctcttg ataaacaaaa agctttagaa actatacaaa aattcacctt taatcttgaa
     8101 cctttagtgg caaattctta cactagtcta gtttcaaatt tattaaaagt ggatgaaaaa
     8161 tttattgtct tatcacaaaa ttcaaaaaaa accatacaaa cccctttaat ttctcaaaat
     8221 aaatacaatt ttcctaaaga aaaaattcac attgcagaat tagaacttat agctttttta
     8281 aaacagcatc cagatatatg taacgatttt aagcaaatta gtgatagtgt ttgttttaaa
     8341 cataagattt tattggataa aattttagaa aaaaaaggtt atgaagatag tgatattaga
     8401 gaatttgaaa gtaaaaatat tcgaaaaaat ttaaactata gcgaattctt gttaggtatt
     8461 tgcaaggtta atttagcttt tttaaacaat gtaaaaatta aaaattctac actcgcatta
     8521 aaaaaacaac tttttacgct tattgataaa aatttaaatc ttttaattaa aaatttaaat
     8581 accgcagaat taaat
//
LOCUS       DAPIYB010000068         8527 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.069, whole genome shotgun sequence.
ACCESSION   DAPIYB010000068 DAPIYB010000000
VERSION     DAPIYB010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8527
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.069"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(101..1613)
                     /locus_tag="RJ318_001329"
     rRNA            complement(101..1613)
                     /locus_tag="RJ318_001329"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(2078..2815)
                     /locus_tag="RJ318_001330"
     CDS             complement(2078..2815)
                     /locus_tag="RJ318_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7431186.1"
                     /translation="MIKAFSLLEFVFIILILGIVFNLGSLYLKKDNLLEGAIQILNDI
                     QYTQSLAMMQEGIRVDELTIAKREWFKSKWQIYFIKSAATGYDQTYTIFLDKNGDGNA
                     NLGKTEINIDREIAVDVINHNKLMNSGQSGVISKDDEKTTQRFNLTKRFGIEKVEFKG
                     SCSGFTRLVFDEMGRVYSPLKNANYAYEKTLAKNNSDCIIRLLSKKHALCIVIDTLSG
                     YVYIPDFKTLKSQFVNIKNKNYECSKI"
     gene            complement(2808..4034)
                     /locus_tag="RJ318_001331"
     CDS             complement(2808..4034)
                     /locus_tag="RJ318_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431187.1"
                     /translation="MEKIKNYKLIIILLSLDLLALLYGTSTLSISADEADIYFGEQGK
                     SLIFSHSLLYYISHFGTFIFGQNDFGLRLPFLFFHFLSCLLLYLLALKYTKTKIDAFF
                     SLLLFVLLPGTVASALLVNAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFN
                     ILFLTFFFFGIYKRNAILFTLSLVLFGASISFYGFDTGGRPRGYFLDTLGIFAACFSP
                     LVFVYFFYTIYRLTFQKYKNLLWFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLL
                     IKTLMQSYRVRLPVFRLRYKIFIECSIIFLIFCYFLIVANQLLYYFINNPNRHFANNY
                     HFAKELALELKKQDVLELATAPSLQKRLRFYGIKNSNKFYLKALKQADKHDMDKKIVK
                     VKLGKYEKVYQILNYD"
     gene            4162..4746
                     /locus_tag="RJ318_001332"
     CDS             4162..4746
                     /locus_tag="RJ318_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDV7431188.1"
                     /translation="MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAV
                     HFVYAYRVLNDFNQIVEDKSDDGEPKGTSGMPTLNVLRGYDLINAALITVRYFGGIKL
                     GTGGLVRAYSDAANAVINNSSLLSFELKKNTTIAIDLKNLNRFEHFLKTYSFNFTKDF
                     KDCKAILHIKLNEKEEQEFEIFCKNFAPFEIEKL"
     gene            complement(4790..5173)
                     /locus_tag="RJ318_001333"
     CDS             complement(4790..5173)
                     /locus_tag="RJ318_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431189.1"
                     /translation="MQVNYRTISSYEYDAISGQYKQVDKQIEDYSSSGDSDFMDMLNK
                     ADEKSSGDALNSSSSFQSNAQNSNSNLSNYAQMSNVYAYRFRQNEGELSMRAQSASVH
                     NDLTQQGANEQSKNNTLLNDLLNAI"
     gene            complement(5248..5583)
                     /locus_tag="RJ318_001334"
     CDS             complement(5248..5583)
                     /locus_tag="RJ318_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431190.1"
                     /translation="MMAKFRIQYSAGFGHYTQNHKGFGPTIYIEEVVEFDNGKDYFDY
                     IDFYKTYSKSDDTYFHISFLEDRPLSDKEITIRNEYRKMRDENCKKAKEEFIANNELD
                     VEHLPTHHD"
     gene            complement(5573..7150)
                     /locus_tag="RJ318_001335"
     CDS             complement(5573..7150)
                     /locus_tag="RJ318_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDV7431191.1"
                     /translation="MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFL
                     KILSGEIESSSGEIVFDEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYEALKEKEKL
                     YMSEEFTDEINERLGELEIITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADK
                     FKVLLAQVLFLGADALFLDEPTNNLDLEAISWLENELLRHEGTLVVISHDRHFLNKIC
                     TRILDVDFKQIRDFAGNYDDWYMASTLLAKQAELKRDKTLKEREELENFIRRFSANAS
                     KAKQATSRAKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLEIKGIGKAYDKQLFS
                     NLELKIEKNDKIALIGANGVGKSTLAKIIAHAISPDSGSIHLGATIELGYFPQDTSNL
                     ICENLKLYEWLMSEKFKDLDEIRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLML
                     ERPNFLLLDEPDNHLDLESIIALGEALYNFKGVVLCISHDRELVSAFANRIWHLENGK
                     LTDFRGTYQEFLGENDG"
     gene            complement(7280..7696)
                     /locus_tag="RJ318_001336"
     CDS             complement(7280..7696)
                     /locus_tag="RJ318_001336"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431192.1"
                     /translation="MFKKVILFFLMGFALLQANSLDKCDNTAVVSNLKEKIPSEIFKN
                     LYELSGLKAQGIDYEDYAKGLKEIAKHDGMVNYTDMIEVNSISNFDLNFDSCMATINA
                     ALKGEQRKGLWSVVYKVSNINQVKITDITYINGDFQ"
     gene            complement(7709..8341)
                     /locus_tag="RJ318_001337"
     CDS             complement(7709..8341)
                     /locus_tag="RJ318_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HDV7431193.1"
                     /translation="MTKFLSICSLIAMLLSGCGSDFPGQPSDVARVQQNKYPNGNLKE
                     EIPYNKDSRIHGLKRAFYDNGQLRAEENYKNGKKDGISREYSRNGQLLEEVHFKDNRG
                     YGDFASYYENGNMRAKGKLLGYNEDGMPEFEGNYKEYYENGTLMCDYNFDNKGKFDGV
                     QKRYDENGALEDEENYKNGLKNGVFREYKKGEIVREEEYKNGILVAKPKN"
     gene            complement(8350..8520)
                     /locus_tag="RJ318_001338"
     CDS             complement(8350..8520)
                     /locus_tag="RJ318_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002899643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superinfection immunity protein"
                     /protein_id="HDV7431194.1"
                     /translation="MLPAIIGLSRKHSNWLIISLLNLFFGWTIIVWLVCLIWSFTGSF
                     KQTIIIKEKNEK"
BASE COUNT         2880 a         1638 c         1141 g         2868 t
ORIGIN      
        1 aaacaattag ctttatcatc aatctttgaa atctaaacaa gaatcaattg agtttatata
       61 ttgaagtaat agttgtgaga cttattactt tgtactctag aaaggaggtg atccaaccgc
      121 aggttctcct acggttacct tgttacgact tcaccccagt cgctgattcc actgtggacg
      181 gtaactagtt tagtattccg gcttcgagtg aaatcaactc ccatggtgtg acgggcggtg
      241 agtacaagac ccgggaacgt attcaccgta gcatggctga tctacgatta ctagcgattc
      301 cggcttcatg ctctcgagtt gcagagaaca atccgaactg ggacatattt tatagatttg
      361 ctccacctcg cggtattgcg tctcattgta tatgccattg tagcacgtgt gtcgccctgg
      421 gcataagggc catgatgact tgacgtcgtc cacaccttcc tcctccttac gaaggcagtc
      481 tatttagagt gctcggccga accgttagca actaaatacg tgggttgcgc tcgttgcggg
      541 acttaaccca acatctcacg acacgagctg acgacagccg tgcagcacct gtctctaagt
      601 tctagcaagc tagcaccctc atatctctat aaggttctta ggatatcaag cccaggtaag
      661 gttcttcgcg tatcttcgaa ttaaaccaca tgctccaccg cttgtgcggg tccccgtcta
      721 ttcctttgag ttttaatctt gcgaccgtac tccccaggcg gtacacttaa tgcgttagct
      781 gcattactga gatgactagc accccaacaa ctagtgtaca tcgtttaggg cgtggactac
      841 cagggtatct aatcctgttt gctccccacg ctttcgcgcc ttagcgtcag ttgagttcca
      901 gcagatcgcc ttcgcaatgg gtattcttgg tgatatctac ggattttacc cctacaccac
      961 caattccatc tgcctctccc tcactctaga ctatcagttt cccaagcagt ttaatggtta
     1021 agccattaga tttcacaaga gacttgataa tccgcctacg cgccctttac gcccagtgat
     1081 tccgagtaac gcttgcaccc tccgtattac cgcggctgct ggcacggagt tagccggtgc
     1141 ttattcctta ggtaccgtca gaattcttcc ctaagaaaag gagtttacgc tccgaaaagt
     1201 gtcatcctcc acgcggcgtt gctgcgtcag ggtttccccc attgcgcaat attccctact
     1261 gctgcctccc gtaggagtct ggaccgtgtc tcagttccag tgtgactgat catcctctca
     1321 gaccagttaa gcgtcatagc cttggtaagc cattacctta ccaactagct gatactatat
     1381 agtctcatcc tacaccgaaa aactttccct actcaacttg tgttaagcag gagtatagag
     1441 tattagcagt cgtttccaac tgttgtcctc ttgtgtaggg cagattaact ataccttact
     1501 cacccgtgcg ccactaatcc acttctagca agctagaagc ttcatcgttc gacttgcatg
     1561 tattaggcac gccgccagcg ttcactctga gccaggatca aactctccat aaaaaattat
     1621 agatagttta atctttttct tcaaagaaaa agttatgaaa gattaaaaga aaagttttta
     1681 atctttttaa ttattagatt gaatagattt tacataattg cttatgccta aatctgttct
     1741 ggctcaatcg atcacttatt tagatttcaa agattgacta ataagatttg aataacaata
     1801 ctaatttaaa agaacaaaac aaaaaatcat ttttaaaaga aaagttttta aattaaaaaa
     1861 caagatttat aaaaaagctt ttagtttata agacaaaaac caaaagagtt aatttataaa
     1921 atctactaag ctagtgaaac tttataattt aaaagatttt aagtcctttt ttcaaaaaag
     1981 gaaatgaaag tataaccaat taaacttaaa aggggattaa acaaaggatt aaatagtata
     2041 aatatttgtg taagtattta tataagtata atgggggcta tattttagag cactcgtaat
     2101 ttttattttt tatattaaca aattgacttt taagtgtttt aaaatctgga atataaacat
     2161 aaccgctaag cgtatctata acgatacaaa gagcatgctt ttttgataac aaacgtataa
     2221 tgcaatctga attattcttt gctaaagttt tttcataggc ataattggca ttttttaacg
     2281 gagaatacac tctgcccatt tcatcaaata ctaatctagt aaatcctgaa caagatcctt
     2341 tgaattcaac cttttctatt ccgaatcttt ttgtaagatt aaatctttgt gtagtttttt
     2401 catcatcttt actaataact ccactttgac ctgaattcat taatttgtta tgattgatta
     2461 catcaacagc aatttctcta tctatattga tttcagtttt acctaaatta gcatttccat
     2521 cgccattttt atccaagaaa atagtatatg tttgatcata acctgtggca gctgatttta
     2581 taaaataaat ctgccattta cttttaaacc actctctttt tgcaatagtc aactcatcaa
     2641 ctcttatacc ttcttgcatc atggctaaac tttgggtata ttggatatca ttaagaattt
     2701 gtatcgcacc ttctagtaga ttgtcttttt ttaagtaaag actgcctaaa ttaaaaacta
     2761 tacctaaaat gagaattata aacacaaatt ccaacaaact gaaagcttta atcatagttt
     2821 aaaatctgat atactttttc atattttcca agttttactt taacaatttt tttgtccata
     2881 tcatgcttat cggcttgttt taaagctttt aaataaaact tattgctatt ttttattcca
     2941 taaaatcgca atcttttttg caaacttggg gctgttgcaa gctctaaaac atcttgtttt
     3001 tttaattcta gtgccaattc tttagcaaaa tgataattat tggcaaaatg acgatttgga
     3061 ttgtttataa aataatacaa taattgatta gcgacgatta aaaagtaaca aaatatcaaa
     3121 aaaattatag aacattctat aaagatttta taccttaatc gaaaaactgg taatctcacc
     3181 ctataacttt gcattaaagt ttttataagc aaaggagtgc aaataacaca aaaaggcaaa
     3241 aaatcatcta aaaaaagttt ttgtcttaaa gaaagcaaca aacaaaatac aaatgttacg
     3301 ctcattaaaa accataataa atttttatat ttttgaaaag tcaaacgata aatagtataa
     3361 aaaaaataca caaaaaccaa aggagaaaaa catgcagcaa aaattcctaa ggtatctaaa
     3421 aaataacctc ttggacgacc acctgtatca aaaccataaa aactgatact cgctccaaac
     3481 aaaacaagag ataaggtaaa taaaatagca tttcttttat aaatcccaaa aaagaaaaaa
     3541 gttaaaaata aaatattaaa agatttatca acaaataata ctataatcaa taatatataa
     3601 aaaagccatt ttttttcata ttcgtaagca cataatatag caagggttaa aaaaatcacc
     3661 aaagatgcgg cattaaccag taaagcactt gcaacagtac ccggcaataa aacaaataac
     3721 aataaagaaa aaaaagcatc aattttagtt ttagtatatt ttaaagctag caaatacaaa
     3781 agcaaacaac ttaaaaaatg aaaaaataaa aaaggaagcc ttaaaccaaa atcattttgc
     3841 ccaaaaataa aagttccaaa atgagatata taataaagca aactatgaga aaaaataagt
     3901 gatttaccct gctcaccaaa ataaatatca gcttcatcag cactaatact cagtgttgaa
     3961 gttccataaa gcaaagccaa caaatcaaga ctaagtaaaa tgatgataag tttataattt
     4021 ttgatttttt ccataatgaa aattttacaa aattaaactt aaaatatcaa tgcaaatcat
     4081 acaaatatca aatatcttaa aaattaacat caaattgatt ttagttttta taagtataat
     4141 tttaaataaa agaaggcaaa aatgcaaact attgatcaaa tttttcaaac acaaatcgat
     4201 attaaaaaat ctactttctt atcttttctt tgccctttta aagattttaa atttttaata
     4261 gaaacactaa aaaaagaaca tccaaaagcc gttcattttg tctatgctta tcgtgtttta
     4321 aatgatttca atcaaattgt agaagataaa agtgatgatg gagagcctaa aggaacttct
     4381 ggaatgccaa ctttaaatgt tctaaggggc tatgatctta tcaatgcggc tttaatcact
     4441 gtaagatatt ttggcggtat aaaacttggt acagggggac ttgtaagagc ttatagcgat
     4501 gcagcaaatg ctgtgataaa taattcttct ttactttcat tcgaattgaa aaaaaataca
     4561 accattgcta ttgatttaaa aaatttaaat cgttttgaac attttttaaa aacttattct
     4621 tttaatttca caaaagattt taaggattgc aaagctatat tacatatcaa attaaatgaa
     4681 aaagaggagc aagaatttga aattttttgt aaaaattttg caccttttga aatagagaaa
     4741 ttataaattc ttgcaagtaa atataaaagc tccaaaatgg agcttttgat taaattgcgt
     4801 tcaataaatc atttaacaaa gtattattct tactttgttc atttgcacct tgttgtgtaa
     4861 gatcattatg aacgctagca ctttgagctc tcatagacag ctcgccttca ttttgtctaa
     4921 aacgataagc gtaaacattt gacatttgag cataattact taaatttgaa tttgagtttt
     4981 gcgcattgct ttgaaaacta ctgctagaat ttaaagcatc tccgcttgac ttctcatccg
     5041 ccttatttaa catatccata aaatcagaat ctccagatga agaataatct tcaatctgtt
     5101 tatccacctg tttatactga ccactaatag catcgtattc atacgagcta atcgttctat
     5161 aatttacctg catagttttc tcctttcaaa atatgcaaaa actatacaag caaaaagcgt
     5221 tcctttttat gtaaaaatta atgtttttta atcatggtga gtaggcaaat gctccacatc
     5281 aagctcattg ttggctataa attcctcctt ggctttttta cagttttcat cacgcatttt
     5341 gcggtattca ttgcgaatgg tgatttcttt atcgcttaga ggtctatctt ctaaaaaact
     5401 gatatgaaaa taagtatcat cgctctttga ataagtttta taaaaatcta tatagtcaaa
     5461 ataatccttg ccattatcaa actctacgac ctcttctata taaatcgtag gtccaaaacc
     5521 cttgtgattt tgcgtatagt gcccaaaacc tgcgctgtat tgaattctaa atttagccat
     5581 cattttctcc taaaaattct tgataagttc cacgaaaatc cgtaagctta ccattttcta
     5641 aatgccaaat tctattagca aaagcagaaa ctaactccct atcgtggctg atacaaagca
     5701 ctacaccttt gaaattatac aaagcttcac ctagtgcaat aatactttca agatctaaat
     5761 ggttatcagg ctcatctaaa agcaagaaat ttggacgctc tagcattaaa cgagaaagca
     5821 ttaaacggtg tttttcaccc ccacttaaac ttgctgccat cttttcttga tcactgccac
     5881 taaaaagcat tctacctaaa cacttacgga tttcatctag atctttaaat ttttcactca
     5941 tcaaccattc ataaagtttc aaattttcac aaattaaatt acttgtatct tgaggaaaat
     6001 atccaagctc tatagttgcc ccaagatgta tggatccact atctggactt atagcatggg
     6061 cgatgatttt tgccaaagta cttttgccca caccatttgc cccaatcaaa gcgattttat
     6121 catttttttc tatttttagc tccaaatttg aaaacaattg tttatcataa gccttgccta
     6181 tacctttaat ttctaaaact tcattaccta tttcacgatt agttctaaat actatactag
     6241 gatctctacg gcttgaaatt ttaatctctt caagctctag tttttcaagc gccttagcac
     6301 ggcttgtggc ttgttttgct ttagaagcat ttgcactaaa acggcgaatg aaattttcta
     6361 attcttctct ttcttttaag gttttatcgc gtttaagctc agcttgtttt gccaaaagcg
     6421 ttgaagccat ataccaatca tcataatttc ccgcaaaatc acgaatttgt ttaaaatcca
     6481 catccaaaat ccttgtgcaa attttattta aaaaatgcct atcatgagag atgacaacca
     6541 aagttccttc atgtcttaaa agttcatttt caagccaaga aatcgcctct aaatcaaggt
     6601 tatttgtagg ctcatctaaa aaaagcgcat cggcacctaa aaacaaaact tgagctaaca
     6661 aaactttaaa tttatccgca ctttgtaagg tgctcattaa agcatcgaaa tctttaatct
     6721 ttaaagaact taaaattttt tcacaacgtg tttcacaatc ataatttgga tcttcttcag
     6781 ccgttattat ctcaagctca cctaaacgct cattgatctc atcagtaaat tcctcgctca
     6841 tataaagctt ttctttttct tttaaggcct catataaacg cttatttgca cacatcactg
     6901 catctttgat ggtgtagttt tcaaaagcaa attgatcctg tcctaaaact gcgattttca
     6961 agccttcatc aaatactatt tcaccactac ttgactcaat ttctcctgaa agaattttca
     7021 aaaaagtcga ttttcccgca ccattagcac cgataagtcc gtatctttgt cctcgaacaa
     7081 gttttaaatt aacattttca aataaaagct gatttgcaaa acgcatagta agatttttta
     7141 cttcaaccat gattttcctt aaatttttta cttataaaaa tttttaagaa attgtatcaa
     7201 aaaaagactt gaaattaatt gagtataaaa tattagtaag tcatgaaatt aattctattg
     7261 acttacttta ataaaaatat tattggaaat ctccattgat ataagttata tctgtaattt
     7321 tcacttgatt tatgttagaa accttataaa caacactcca aagacctttt ctctgttccc
     7381 cttttaatgc agcattaatc gtagccatac aagaatcaaa attaagatca aaatttgaaa
     7441 tggaattaac ttcgatcata tcagtgtaat ttaccattcc atcatgcttg gctatttcct
     7501 tgaggccttt tgcataatct tcataatcaa tcccttgggc tttaagtccg gataattcat
     7561 aaagattttt aaaaatttca ctaggaattt tttctttaag atttgaaaca actgccgtat
     7621 tatcacattt gtctaatgag ttggcctgaa gcaaggcaaa ccccattaag aaaaataaaa
     7681 ttactttttt aaacatatct aaactcctct aatttttagg ttttgctact aaaataccat
     7741 ttttatattc ttcttctctt acaatctccc cttttttata ttctctaaag actccatttt
     7801 taagtccatt tttataattt tcttcgtctt ctaaggcgcc attttcatca taacgctttt
     7861 gtactccatc aaatttacct ttattatcaa aattataatc acacattaaa gttccatttt
     7921 cataatattc cttgtaatta ccttcaaatt ctggcatacc atcttcatta tagccaagta
     7981 gttttccctt tgctctcata tttccattct cataatagct tgcaaaatca ccatatccgc
     8041 gattatcttt aaaatgcacc tcctcaagta attgcccatt tctagaatat tccctgctaa
     8101 ttccatcttt ttttccattt ttataatttt cttcagctct tagctgacca ttgtcataaa
     8161 aagctctttt taacccatgt attcttgaat ctttattata gggaatttct tcttttaaat
     8221 ttccatttgg atatttgttt tgctgaactc tagccacatc gctaggttgt ccaggaaaat
     8281 cacttccaca accacttaac aacatcgcaa ttaaactaca aatgcttaaa aattttgtca
     8341 ttttttctcc tatttctcat ttttttcttt aataataata gtttgcttaa aacttcccgt
     8401 aaaagaccat attaaacaaa caagccaaac aataatagtc caaccaaaaa acaaatttag
     8461 caaagaaatt atcagccaat tagaatgctt tctgctcaaa ccaataatag cgggcaacat
     8521 gtataat
//
LOCUS       DAPIYB010000069         8445 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.070, whole genome shotgun sequence.
ACCESSION   DAPIYB010000069 DAPIYB010000000
VERSION     DAPIYB010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8445
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.070"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            45..1118
                     /gene="ispG"
                     /locus_tag="RJ318_001339"
                     /gene_synonym="gcpE"
     CDS             45..1118
                     /gene="ispG"
                     /locus_tag="RJ318_001339"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDV7431195.1"
                     /translation="MEYKRFKTRQIKVGNVLIGGDAPISVQSMLFTKTRDIEGSLEQI
                     NRLYFAGANIVRLACLDMADARALKEIKAKSPLPLIVDIHFNHNLAVYCAEFIDGVRI
                     NPGNIGSKENIKEVVKACKERGIPIRIGVNHGSIEKQFSDKFGYGVDAMLESAMYNIK
                     LLEDLDFFDIKISMKTSDAQKTIEAYERLRPLCDYPFHLGVTEAGTKFHSTVKSSIAL
                     GNLLLKGIGDTMRVSMTGELEEEIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLLS
                     AIKIVEEKTKHIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQGLVIRHGEVVAKLK
                     ESELVDRFLAEVEDEVKSRAVKE"
     gene            complement(1148..1846)
                     /gene="flgH"
                     /locus_tag="RJ318_001340"
     CDS             complement(1148..1846)
                     /gene="flgH"
                     /locus_tag="RJ318_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HDV7431196.1"
                     /translation="MKKVLFYVLPFAFFGCSATVDPQISMKPPAYVEELAPKQSNNVE
                     SAPGSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGAL
                     TGSSGVVANALNKVNAYSNIGFQTNSSNNYTGTGSQSRNESFNTTISTRVIKILSNGN
                     YFIEGSRELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTR
                     KPWGSKVIEAIWPF"
     gene            1936..3441
                     /gene="pta"
                     /locus_tag="RJ318_001341"
     CDS             1936..3441
                     /gene="pta"
                     /locus_tag="RJ318_001341"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDV7431197.1"
                     /translation="MMANLYLMRSRSDELNTIISTNLLKNYSKIYKNIAIYCPVIYIH
                     RVPVLQGWLEEFNINQTVKSAYGFTFREAMEEFSKDPHNFFNVILEEYEELKRKYDFV
                     LVNSFCEFGILDGFDLSIKLAKNLNTPIAAIINDEDKLIAQKYFDHALDGRNYVLINE
                     NFNFEEVQKLKEYDFITPHRFKYELIKQSIKNKKTVVLPESNDERILKAAEILLKSKV
                     VDLILLGDEEKIKQDATRLSLDLSAMQIMNPLNSEYNQEFTSILYEARKSKGMSLEEA
                     KMLVQDKTYFGTLLIHTGKADAMVSGASTTTAETIRPALQLIKTKEGISSVSGIFFMG
                     LEDQVLAFADCAVNPSPTAEQLATSAYVSAMTAKSFGLEPRIALLSYSSGDSGKGESV
                     DLVKEALKIAKEKYPELNIDGPMQFDCAYDPKTAAKKMPNSKIAGHANVYIFPDLNAA
                     NICYKAVQRTANALAIGPILQGLKKPVNDLSRGCLVDDIVDTVILSAIQAQ"
     gene            3455..4645
                     /locus_tag="RJ318_001342"
     CDS             3455..4645
                     /locus_tag="RJ318_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDV7431198.1"
                     /translation="MKILVLNSGSSSIKFKFFDNKIVKASGLVEKIGEQNSKVVLKNT
                     LNNESFERELTINNHEEGLSIVNELFKESGILADLNALDGCGHRIVHGGRNLSEHCLV
                     DDYVLKEIDRVSIFAPLHNPAHLAGIKTMIKAAPSVANAAIFDTAFHRTMPDFAYMYA
                     LPYDFYDKHNIRRYGFHGTSHAYVSSRAAKFLQKDQNELNVISAHLGNGASVCAIEKG
                     KSMDTSMGFTPLEGLIMGTRCGDLDPAILPFVSHLKGLTIEEIDTLMNKKSGVYGICG
                     YNDFRDIEREIEQGNDKARLALDMFCYRLVKYIGSYFAVLPKTDAIIFTGGIGENDSL
                     VRQKVCERLAHLGIELDFELNKQRISGERMINHANSKLKVLVIPTDEELEIARITEEL
                     IGKN"
     gene            complement(4673..8425)
                     /locus_tag="RJ318_001343"
     CDS             complement(4673..8425)
                     /locus_tag="RJ318_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /protein_id="HDV7431199.1"
                     /translation="MNYYQELKKYLNNNLFTSYSLEIDFPKIYNFNANQKAFRDILTK
                     ITKIYNKNKFIKQNEHQFEDEFISKVLEILGWCFVRQDEKIIQGKLEKPDFLLFSNDK
                     LKSKYENLDKETKKSSNDFTIILESKAYNIEIDNKKVKDNPHFQILRYLGNLKKNYGF
                     LTNGRFWRFYDNSILNSNKVFYEINLEKIIEDQNIEAFAYFYSVFSAFNFTEKEDHLE
                     ITLQNNKLSKIKIEDDLKSIIYGTNGNESLFEFIGSRIYNKTKADLKLIYENSLYFIF
                     RLLFIAYFEDKFEIILEKHKYFKSKISLRTLLENLQEDENSSGGFGELENIFNIYNKG
                     KGNFDMPVFNGGLFDESKTALLSTPKIFNDKDLKFILNQLLNFKDKNLSFKRDYKTLS
                     VEHLGTIYEGLLSYFFEIANEDIYYVSYKEKSKEIECYFDNYDFKILEKSKKVEKYTF
                     YKKGQIYLKNTSNSRKASASFYTPQSIANFLIQSALKDKLNNENILKFKILDNACGSG
                     HFLVGVLNAITHIVLSDFDHFTNLKELYEEEKENILNHIKDFVQDYEVDESDILKRLL
                     LKRIIYGVDLNPFSIELTKLSLWIDSFIFTTPLSFIEHHIKCGNALINSNLSDFKDLI
                     KQNSSNLFTNSITQEFEILQEVFEKLDNLKDTNEEQIKQSKQIYQNEITPKLNKLNLY
                     LNYINTLHFVNKEELQILKALSQDDIQNLSQNEQAKAIISKYQKEFNFFNYELEFPEI
                     VENQVFKGFDIIIGNPPWDKTKFSDDDFFPQYKSDYRSLIASKKKEIQDNLLAKDYIK
                     QNYEKQKAYINDLSEYYKKAYPLNKGSGDGNLFRLFVEKNLSLLKQDGNLAYVLPSAL
                     MFEDGSLTLRKEILENKTLEYFYSFENRQAIFADVHKSYKFALMQVKNTQANHTHKIK
                     TMFYKTDMNSLKNKDEILTLSLKDIKKLSPTHLALMELKDKQALEILRKCYNAFQNLS
                     FDYIDFVNELHMTNDKDLFIEEFREGLLPLFEGKMIHQFDTNFSQATYFLEKAKFDER
                     LKSKELSRAKKATGKELNPKLIKYDREFFRLGYRTIASDTNERTLIASLLPKNCGCGN
                     SVYSNIPKQYIVKDDAICMDIVPYERILFVLALFNSLVVDFIIRNMVQINVSKTYLER
                     IPLPQPSDEEIQNNEIYKTLAKNALLLQLYNDKNHHFDELKQEFNIKNEEIPKTKKAY
                     DILRAKNDLLVKKLYDLSDDEFSYMISTFKVLNEKQSEYTTLLKTI"
BASE COUNT         2779 a         1141 c         1373 g         3152 t
ORIGIN      
        1 aaaaagttaa aatttgatat taaaattttt caaagagtga agttatggag tataaaagat
       61 ttaaaaccag acaaatcaaa gtaggaaatg ttttaatagg cggtgatgca cccatttcag
      121 ttcaatctat gctttttact aaaacaagag atatagaagg ttctttagaa caaatcaatc
      181 gtctttattt tgcaggagca aacatagtgc gtttggcgtg cttggatatg gctgatgcaa
      241 gggctttaaa agagattaaa gctaaaagtc ctctaccttt aatcgtagat attcatttta
      301 atcataattt ggctgtatat tgtgctgaat ttatcgatgg cgtgcgtata aatcctggca
      361 atataggctc taaagaaaat attaaagaag tggtaaaagc atgtaaagaa cggggtatcc
      421 ctatacgcat cggtgtaaat cacggctcca tagaaaaaca atttagtgat aaatttggtt
      481 atggtgtcga tgccatgcta gaaagtgcga tgtataatat caagctttta gaggatttag
      541 acttttttga tattaaaatt tccatgaaga cttcagatgc tcaaaaaact atagaagctt
      601 atgagagatt aagaccgctt tgtgattatc cttttcactt aggggtaact gaagcaggaa
      661 ctaaatttca tagcactgta aaaagttcta tagctttagg aaatttactt cttaaaggta
      721 taggcgatac tatgcgtgtt tctatgacgg gtgagcttga agaagaaatt cgtgtagcaa
      781 gagcaatttt gcaagatagc ggagtacaaa aaagcggagt aaatattatt tcatgtccaa
      841 cttgcggtag gattcaaagt gatttgttaa gtgcgattaa aatcgtagag gaaaaaacca
      901 agcatataaa agaaccttta aacatcagtg tcatgggttg tgtggtaaat gctttaggcg
      961 aagccaaggg cgctgatgtg gctatagcct ttgggaaaaa tcaaggactt gtcataagac
     1021 atggtgaagt tgtagctaaa ttaaaagaaa gtgaacttgt agatagattt ttagctgaag
     1081 ttgaagatga ggttaaaagt agggctgtaa aagaataaaa gcctaaaagc aaggtttaac
     1141 cttgctttta gaatggccat atcgcttcta taactttact accccaaggt tttcttgtgc
     1201 ttctatccac ttctccttct gttttatata gaattttagc atctgctata tatttactat
     1261 ctatagtatt gtcttgaccg atgtcataag gacgaataac accgcttaat tgtatgattt
     1321 gcttctctcc gttgattaaa agctctcttg aaccttcgat aaaataatta ccatttgata
     1381 aaattttaat tacacgtgtt gaaattgtag tattgaaact ttcatttcta ctttgtgagc
     1441 ctgttcctgt gtagttgttt gaactattgg tttgaaagcc tatattagaa taagcattga
     1501 ctttattaag agcattagct accactcctg aacttcctgt taaagcacct ccgcctaaat
     1561 ttgaggtatt agttctactt gttgctttat tagcttgtgt gctttgagtg gtactttctt
     1621 gtataacaac tgtaactaaa tcatttacat tcatagcttt tttatctgaa aataaaggat
     1681 tatccccttt gccaaaaagc gatcctggtg cactttctac attattgctt tgttttggtg
     1741 caagttcttc tacataagca ggtggtttca ttgaaatttg cggatcaacc gttgcagaac
     1801 aaccaaaaaa tgcaaacggt aacacataaa ataaaacttt tttcattttc gtcctttaaa
     1861 atatgaattt ttatttttct ttgttaaaat tagaaaaagc aaagagtgtt ccacatttat
     1921 aaattcaagg agaaaatgat ggcaaatctt tatttgatga gatctagaag tgatgagtta
     1981 aatactatta ttagtacaaa tttgcttaaa aattatagca aaatttacaa aaatatcgca
     2041 atttattgcc ctgtgatata catacatcgc gttcctgttt tgcagggttg gttggaagaa
     2101 tttaatatca atcaaaccgt aaaaagcgct tatggtttta cctttagaga ggcaatggag
     2161 gaatttagca aagatcctca taattttttt aatgttattt tagaagaata cgaagagtta
     2221 aaacgcaaat acgattttgt gcttgtaaat agtttttgcg aatttggaat acttgatgga
     2281 tttgatctta gtataaaatt ggctaaaaat cttaataccc ctatcgctgc tattattaac
     2341 gatgaagata aacttatagc tcaaaaatat tttgatcatg ctctagatgg tcgtaattat
     2401 gttttgatta atgaaaattt taattttgaa gaagtgcaaa aacttaaaga atatgatttt
     2461 ataactcctc atcgttttaa atatgaattg attaaacaaa gtataaaaaa taaaaaaacc
     2521 gttgttttgc cagaaagtaa tgatgagaga attttaaaag ctgctgaaat tttattaaaa
     2581 agtaaagttg ttgatcttat tttattgggc gatgaagaaa aaatcaaaca agatgctact
     2641 agattaagtc ttgatttaag tgctatgcaa attatgaatc cacttaattc agaatataat
     2701 caagaattta cttctattct ttatgaagca agaaaatcta aaggcatgag tttagaagag
     2761 gctaagatgc tagttcagga taaaacttat tttggaactt tgcttataca tactggaaaa
     2821 gctgatgcta tggttagtgg agcatcaact actacagctg aaacgattcg cccagcatta
     2881 cagcttatta aaaccaaaga aggtattagt tccgtttcag gaattttctt tatggggctt
     2941 gaagatcaag ttttagcttt tgctgattgt gctgtaaatc caagtccaac tgccgaacag
     3001 cttgcaacta gtgcttatgt aagtgctatg actgctaaat cttttggact tgaaccaaga
     3061 atagctttgc tttcttattc tagtggcgat agtggtaaag gggaaagcgt agatcttgta
     3121 aaagaagcat taaagattgc taaagaaaaa taccctgagt taaatataga tggtcctatg
     3181 cagtttgatt gcgcttatga tccaaagact gcagcaaaga aaatgccaaa ttctaagata
     3241 gcaggccatg caaatgtata tatttttcct gatcttaacg cagcaaatat ttgttacaaa
     3301 gcagttcaaa gaactgctaa tgctttagca atcggtccta ttttgcaagg tcttaaaaaa
     3361 cctgttaatg atttaagtcg tggatgtttg gtagatgata ttgtagatac tgttatttta
     3421 agtgctatac aagctcaata gaaaggaata ataaatgaaa attttagttt taaattcagg
     3481 ttcttcatcg attaaattta aattttttga taataaaatc gttaaagcca gtggattggt
     3541 agaaaaaatt ggagagcaaa attcaaaggt tgtattaaaa aatactttaa ataacgaaag
     3601 ttttgaaaga gaattaacaa taaataatca cgaagaagga cttagtatag tcaacgagct
     3661 ttttaaagaa tcaggaattt tagcagattt aaatgctctt gatggctgtg gtcatcgtat
     3721 agttcacggg ggaagaaatt taagtgagca ttgtttagta gatgattatg ttcttaaaga
     3781 gatagatagg gttagtattt ttgctccttt gcataatcct gcccatttag caggtataaa
     3841 aacaatgatc aaagctgcac ctagtgttgc taatgcagct atttttgata cagcttttca
     3901 tcgcactatg cctgattttg cttatatgta tgctttgcct tatgattttt atgataagca
     3961 taatattaga agatatggtt ttcatgggac ttctcatgct tatgttagtt ctagagcggc
     4021 aaaatttctt caaaaagatc aaaatgaatt aaatgtcatc tctgctcatc ttggaaatgg
     4081 tgcaagtgta tgtgctatag aaaaaggtaa gagtatggat acttctatgg gctttactcc
     4141 acttgaagga cttattatgg gaacgcgttg tggagattta gaccctgcta ttttaccttt
     4201 tgttagtcat cttaagggtt taactataga agaaatagat acactgatga ataaaaaaag
     4261 tggagtatat ggaatttgcg gttataatga ttttagagat atagaaagag agatagaaca
     4321 aggtaatgat aaagcacgct tggctcttga tatgttttgt tatcgtcttg ttaaatatat
     4381 aggatcctac tttgctgtgt tgccaaaaac cgatgctatt atttttacag gtggtatagg
     4441 agaaaatgat agtttggttc gacaaaaagt atgcgagaga ttagctcatc ttggtatcga
     4501 gttagatttt gaacttaaca aacaaaggat ttcgggcgaa agaatgataa atcatgcaaa
     4561 ttctaaactt aaagtgcttg ttattcctac agatgaagaa ttagaaatcg ctagaatcac
     4621 agaagaactt atcggtaaaa attaaatttt aaaaactata taaatctttc atttatatag
     4681 tttttagcaa ggttgtatat tcactttgct tttcatttaa aactttaaaa gtgcttatca
     4741 tgtaagaaaa ttcatcatca cttaaatcat aaagtttttt aaccaataaa tcattttttg
     4801 ctcttaagat atcataagcc tttttagttt ttggaatttc ttcatttttt atattaaatt
     4861 cttgttttag ctcatcaaaa tgatgatttt tatcattgta aagctgtaaa agcaaagcat
     4921 ttttagcgag ggttttataa atttcattgt tttgaatttc ttcatcactt ggttgaggca
     4981 gaggaattct ttctagatag gttttgctta cattgatttg caccatattt cttatgataa
     5041 aatcaaccac taaagaatta aacaaagcca aaacaaataa aattctttca taaggcacta
     5101 tatccatgca aattgcatca tcttttacaa tatattgttt cggaatatta gaataaacac
     5161 tatttccgca cccgcaattt tttggcaata aagaagctat caaggttctt tcatttgtat
     5221 cgcttgcaat agttctatat ccaagtctaa aaaattctct atcgtatttt atcaatttag
     5281 gatttaattc tttcccagta gcttttttag ctcttgaaag ttctttgctt tttaatcgct
     5341 cgtcaaattt agccttttct aaaaaataag tagcttggct aaaatttgta tcaaactgat
     5401 gtatcatttt gccttcaaat aaaggcaaaa gtccttccct aaactcttct ataaacaaat
     5461 ctttatcatt tgtcatatga agttcattta caaaatctat ataatcaaaa gacaagtttt
     5521 gaaaagcatt gtagcatttt cttagaattt ctaaagcctg tttgtctttt aactccatta
     5581 aagctaggtg agttgggctt agctttttga tatcttttaa acttagagtt aaaatttcat
     5641 ctttgttttt taatgagttc atgtctgttt tataaaacat cgttttgatt ttgtgagtgt
     5701 gatttgcttg tgtgtttttt acttgcataa gagcaaattt atagctttta tgcacatcag
     5761 caaatatagc ttgtctattt tcaaaactat aaaaatattc taaagtttta ttttctaaaa
     5821 tttcttttct taaagttaag cttccatctt caaacatcaa agcactagga agtacataag
     5881 ctaaatttcc atcttgtttt aaaagagaaa gatttttttc tacaaaaaga cgaaataaat
     5941 ttccatctcc actgcctttg tttaaaggat aggctttttt ataatactcg cttaaatcat
     6001 ttatatatgc tttttgtttt tcgtaatttt gctttatata atctttcgct agcaaattgt
     6061 cttgaatttc ttttttcttg ctagcgatta agcttctata atcgcttttg tattgtggaa
     6121 agaaatcatc gtcactaaat ttagttttat cccaaggtgg attacctatg atgatatcaa
     6181 agcctttaaa gacttgattt tctacgattt caggaaattc taactcatag ttaaagaaat
     6241 taaattcttt ttgatatttg ctaatgatag cttttgcttg ttcattttgg cttaaatttt
     6301 gtatatcatc ttgacttagg gcttttagaa tttgtaattc ttctttgttg acaaaatgaa
     6361 gcgtgttgat atagtttaga tataaattta gtttattaag ctttggtgtg atttcatttt
     6421 gatagatttg tttggattgt ttgatttgtt cttcgttggt atcttttaga ttatcaagtt
     6481 tttcaaatac ttcttgtaaa atttcaaatt cttgtgttat ggaatttgta aaaaggttgc
     6541 ttgagttttg ttttatcaaa tctttaaaat cacttagatt agaatttatc aaagcattgc
     6601 cacactttat gtggtgttct ataaaagaaa gtggggttgt aaagataaaa ctatctatcc
     6661 aaaggctaag tttagtaagc tctatgctaa aagggtttaa atccactcca taaataatgc
     6721 gttttagtaa aagtcgtttt aaaatatcac tctcatctac ttcatagtct tgcacaaaat
     6781 cttttatatg atttaaaata ttttcttttt cttcttcgta aagttctttt aaatttgtaa
     6841 aatgatcaaa atctgataaa acaatgtgtg taatagcatt taaaactcca actaaaaaat
     6901 gtccactacc gcaagcattg tctagtattt taaatttcaa aatattttca ttgtttagtt
     6961 tgtcttttaa agcactttgg attaaaaaat tagctatgga ttgaggtgtg taaaagcttg
     7021 cgcttgcttt tcttgagttg ctagtatttt taaggtaaat ttgtcctttt ttgtaaaagg
     7081 tgtatttttc tacttttttt gatttttcta aaattttgaa atcataatta tcaaaataac
     7141 attctatttc ttttgatttt tctttatagc ttacatagta aatatcttca tttgctattt
     7201 caaaaaaata agaaagcaag ccttcataaa tcgtgcctaa atgttctaca cttaaagttt
     7261 tgtaatctct tttaaagctt agatttttat ctttaaaatt taataattgg tttaaaatga
     7321 attttaaatc tttatcgtta aagatttttg gcgtgcttaa aagagcggtt ttgctctcat
     7381 caaacaaacc gccattaaaa acaggcatgt caaaattgcc tttgcctttg ttgtaaatgt
     7441 tgaaaatatt ttcaagttct ccaaagccac cacttgagtt ttcatcttct tgtaaatttt
     7501 caagtaaggt tctaagactg attttacttt taaaatactt atgtttttct agtataattt
     7561 caaatttatc ttcaaaataa gcaataaata aaagcctaaa gataaaatat aaagaatttt
     7621 catagattag ttttaaatcc gcctttgttt tattgtaaat tctagagcct atgaattcaa
     7681 ataaagattc atttccattg gttccgtaaa tgatagattt taaatcatct tctattttga
     7741 tttttgaaag tttattgttt tgtagagtta tttctaaatg atcttctttt tctgtgaaat
     7801 taaaagcgct aaacacacta taaaaatacg caaaagcttc aatattttga tcttcaatga
     7861 ttttttctag attgatttcg taaaaaactt tgtttgaatt cagtatagaa ttatcataaa
     7921 aacgccaaaa tctaccattg gttaaaaaac cataattttt cttaagattg cctagatatc
     7981 ttagaatttg aaagtgaggg ttgtctttta cttttttatt gtctatttct atattataag
     8041 cttttgactc taaaatgatt gtgaaatcat tgcttgattt ttttgtttct ttgtctaaat
     8101 tttcgtattt tgattttaat ttgtcattgc taaaaagtag aaaatcaggt ttttccaatt
     8161 ttccttgtat gattttttca tcttgtctta caaagcacca ccctaaaatt tctaatactt
     8221 ttgatataaa ttcatcttca aattgatgtt cgttttgttt tataaattta tttttgttgt
     8281 aaatttttgt aattttagtt aaaatatctc taaaggcttt ttgatttgcg ttgaaattat
     8341 aaatcttagg aaagtcaatt tctaaagaat agcttgtaaa aagattattg ttgaggtatt
     8401 ttttaagttc ttgatagtaa ttcatggctt tctttctaaa gtatt
//
LOCUS       DAPIYB010000070         8440 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.071, whole genome shotgun sequence.
ACCESSION   DAPIYB010000070 DAPIYB010000000
VERSION     DAPIYB010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8440
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.071"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            64..972
                     /locus_tag="RJ318_001344"
     CDS             64..972
                     /locus_tag="RJ318_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HDV7431200.1"
                     /translation="MGILKGTLPALLTPYKDDGSINEKEFIRYCEFGISKGLNGLFCN
                     GSAGDSQALSVEEQVKLMKLTKKATKNNIPIITGITSTIYENTFILAQKAYELGLDAL
                     LLAMPYYYKLSEDALFEYVKYLASEVKLPLYVYNIPLFAPALSLKFIEKVSKLDNVVG
                     IKDSSGDALLLNHILDVVPSNFDVFVGREEFYVGALLAGVKGSMTSIGGVFPELMSEI
                     YKSINEKNIGRALLIQKSLLKAIRFGMSIAFPMGFALLLKARGFEFVNASIHPLSPAT
                     KEELNTRFDEAKELIKTIEKETGIKL"
     gene            969..1232
                     /locus_tag="RJ318_001345"
     CDS             969..1232
                     /locus_tag="RJ318_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002901625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HDV7431201.1"
                     /translation="MKGYIIVNEKDNIATALRDFKKGEKVANIELLNDIASGHKFALK
                     DIKKDEIIIKYAEAIASASCDISTGEWVHIHNTAGIRGRGDKE"
     gene            1235..2401
                     /locus_tag="RJ318_001346"
     CDS             1235..2401
                     /locus_tag="RJ318_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HDV7431202.1"
                     /translation="MKKIMGYRREDGKFGLRNKVIIIPSVHCANKVCENIARKCNGAV
                     YINHQHGCSQLEFDALQTRDVLIGHGSNANVFGVLIIGLGCEVIQAKAVAEKIKEATP
                     YKKVEYLVIQECGGSKNTIENGIKIVNEMLESAAKLQKSEGDFSDLILGTECGGSDSY
                     SGLSANPALGSLSDFVIDEGGAVILAETTELIGCEAILAKRAKNDEIAKKVYDKILAY
                     ENLVKSFHADIRGANPSPGNMAGGLSTIEEKSLGCVYKAGTRTLMDVIDYAKPVVSKG
                     LTFMNTPGNDIEQLSAMVAGGANICVFTTGRGTPTGSAIVPTIKMSSNTFCYENMNDA
                     IDINAGSIIDGVKTKEEVRDELIELIVRISDGELVKAELNEQNDFSVWRLATTC"
     gene            2413..3699
                     /locus_tag="RJ318_001347"
     CDS             2413..3699
                     /locus_tag="RJ318_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004314306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7431203.1"
                     /translation="MKHANSIKLELVCKKISWRILPLIVLMFCLSMLDRTNISFVKSH
                     IEIDAGIGEAAYALGAGIFFIGYAIFEVPSNLFLHKLGAKIWLSRIMITWGLVTMAMI
                     FIQGEISFYVLRFLLGLTEAGFSPGIILYLSYFFPAIYRSKVYGIYQMGVPIAFVFGS
                     LISGFILDYTPNIYFKNWQWMFLIEGGITVLVGIFCLFYLDSHPKDAKWLDIKEKDIL
                     LKHIEISNTKAKDYSIKDIFKSILVWKFVFVYFCIQLSVYGVLFYLPSKIAQILQINV
                     GFEVGLLNAIPWIFVFIALPIFTSLADKKHSWNLHAILFLLLASLSMIASTFVTNLAA
                     FLFFISLAAIGFIVIQPIFWNLPTQVLKGKGAAAAIALIGSLGNLGGFVAPTLKTYIE
                     NHFGVEFGLIVLALIAILGVLVLIHLKITLNLDKGE"
     gene            3700..4488
                     /locus_tag="RJ318_001348"
     CDS             3700..4488
                     /locus_tag="RJ318_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDV7431204.1"
                     /translation="MDLKIKNKVCIITGGAKGIGYGIAKLWASEGGIPVIFSRSMPKE
                     HDKELKKLSSEYEFYEIDLKNYEQIEKLVKKVAIKHGGIYALVNNAGTNDNLHIENTS
                     TQDLIKSYENNLFHYYTMTKECLPYIKKEQGSILNIVSKTGITGQGRTSAYASAKAAQ
                     MGFTREWACAFAKDNVRVNAIAPAEVMTPLYEKWLQNFPNPKEQYEKIAKAIPLGHRF
                     TTIEEIANTAVFTLSPLASHTTGQILMPDGGYVHLDRALNWDEN"
     gene            4499..5755
                     /gene="fucP"
                     /locus_tag="RJ318_001349"
     CDS             4499..5755
                     /gene="fucP"
                     /locus_tag="RJ318_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HDV7431205.1"
                     /translation="MTDSKNIKIAIVLVTSLFFLWGVSYGLIDVMNKNFQNHLHISQH
                     ESGFLQFAYFGAYFIIALPAGYIANRFSYKMGIIFGLALYAIGALLIIPATNLASFHL
                     FLFAFFILACGIGSLETSANPYMTKLGDEKNASFRINAAQSFNGLGQFVGPIIGGALF
                     LSITKQEEGASKEQIEAALVANMGNVQLVYIGIAVIVILILIAFVANKLPEGSAVSDD
                     YKQKDDSKPIYVFKHRHFNLGLLAQFLYIANQVAAGAFFINYVVEHNEGLKDAQGAYY
                     FSIALIAFMLGRIVSTPLMKIIKGEKILGFYSLINVLICFSLYFASGFFSIVLLIALF
                     FFMSISFPTIFAVATKNLPLNQVKLGGSLLVMSIVGGAIMPIIIGFINDHYGTGAGYL
                     AMAPLFLYVAWYGFIGSKVRKNAKDF"
     gene            5739..6509
                     /locus_tag="RJ318_001350"
     CDS             5739..6509
                     /locus_tag="RJ318_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HDV7431206.1"
                     /translation="MQKIFDAHLHLWDLEKIPISWIKDDEKLEQNYDFFRMKQEYKEF
                     EFIGAMYVEVNSDDLEKEALFALEQKKLHNLLFCLADFKHKEELSSFREVMHTSKKGA
                     KRLFEADFEEKIEILKTFNIPFEACIKNEELGFLEKFLSKNPNLKVVLNHLGSPKINR
                     LNEYKKDLSFLKKFQNLYIKLSIPDGFSQETPKEFIFELFAFLKENFSENKFIFGSNY
                     PVAKITPAKWAKLIIESKIFDDLDKIFYKNALLIYKGG"
     gene            6510..6827
                     /locus_tag="RJ318_001351"
     CDS             6510..6827
                     /locus_tag="RJ318_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HDV7431207.1"
                     /translation="MQRYGQIIKIKKEKIEEYKELHTKPYEGVCEMIKECNIQNYSIY
                     LFGEYLFAYFEYIGADFEADMAKMARDESTQKWWKVTDPCQISLGYAGQKWLNMEEVF
                     HLD"
     gene            6841..8279
                     /gene="aldA"
                     /locus_tag="RJ318_001352"
                     /pseudo
     CDS             6841..8279
                     /gene="aldA"
                     /locus_tag="RJ318_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874345.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
BASE COUNT         2912 a         1005 c         1680 g         2843 t
ORIGIN      
        1 ttacaaatat tttgttatat tttttgtata taaatatatt tttgtatata cgaaaggaaa
       61 aaaatgggaa ttttaaaagg aactttaccg gctttactta ctccatataa agatgatgga
      121 agtatcaatg aaaaagaatt tattcgctat tgtgaatttg gtatttctaa aggcttgaac
      181 ggattgtttt gtaatggaag tgcaggggat tctcaagctt tgagcgtgga agagcaagtt
      241 aagttaatga aactcaccaa aaaggctaca aaaaataata tacctatcat cacgggtatt
      301 acctcgacaa tttatgaaaa cacttttatt ttggcgcaaa aagcttatga attaggtctt
      361 gatgccttat tacttgctat gccttattat tataaattga gtgaagatgc actttttgaa
      421 tatgtaaaat atttagcttc tgaagtgaaa cttcccttat atgtttataa tatacctctt
      481 tttgcaccag cactaagctt aaaatttata gaaaaggttt caaagcttga taatgttgtg
      541 ggtataaaag atagtagcgg agatgctttg cttttaaatc atattttaga tgtagtacct
      601 agtaattttg atgtttttgt aggaagagaa gaattttatg taggtgcatt attagcaggt
      661 gtaaaaggtt ctatgactag cataggtgga gtttttccag aacttatgag cgaaatttac
      721 aaatcaatca atgaaaaaaa tataggcaga gctttgctaa tacaaaaaag tttattaaag
      781 gccataagat ttggtatgag catagctttt cctatgggtt ttgctttgct tttaaaggcc
      841 agaggatttg aatttgtaaa tgctagtatt catcctttat cacctgctac aaaagaagaa
      901 ttaaacactc gctttgatga agcaaaagag cttattaaaa ctatagaaaa agaaacaggt
      961 ataaaactat gaaaggatat attatagtca atgaaaaaga caatattgcc acagctttgc
     1021 gtgactttaa aaaaggcgaa aaagtggcaa atattgagct tttaaatgat attgcaagcg
     1081 gacataaatt tgcactaaag gatataaaaa aagatgaaat tattatcaaa tacgcagaag
     1141 ctatagctag tgcaagttgc gatattagta caggggaatg ggtgcatatc cataatactg
     1201 cgggaattag aggtcgtgga gataaggaat gaaaatgaaa aagataatgg gttatagaag
     1261 ggaagatgga aaatttggtt taagaaataa agtcattatc ataccaagtg tacattgtgc
     1321 taataaagtg tgtgaaaata tagctagaaa atgtaatgga gcagtttata tcaaccatca
     1381 gcatggttgc tcccagcttg aatttgatgc tttacaaact agagatgttt taataggtca
     1441 tgggagcaat gccaatgttt ttggtgtttt aattataggg cttggttgtg aggtaataca
     1501 agccaaagca gtagcagaaa aaatcaaaga agcaacgcct tataaaaagg ttgaatattt
     1561 agtgatacaa gaatgtggtg gtagtaaaaa taccattgaa aatggtatca aaatagtcaa
     1621 tgaaatgctt gaaagtgctg caaaattaca aaaaagtgaa ggagatttca gtgatttgat
     1681 tttaggcaca gaatgcggtg gaagtgatag ctatagcgga cttagtgcta atcctgcttt
     1741 aggaagtttg agtgattttg taatcgatga gggtggtgcg gtaattttag cagaaactac
     1801 agaacttata ggttgtgaag ccatactagc taagagagca aaaaacgatg aaatagctaa
     1861 aaaggtatat gataagattt tagcttatga gaatttagtc aaatcttttc atgctgatat
     1921 tcgaggagca aatcctagcc caggaaatat ggcaggcggg cttagtacta tagaggaaaa
     1981 atctttaggc tgtgtttata aggcaggaac tagaacctta atggatgtga ttgattatgc
     2041 taagcctgta gtttctaaag gtttaacttt tatgaataca ccaggcaatg atatagaaca
     2101 acttagtgct atggttgcag gtggagcaaa tatttgtgtt tttactacag gtcgtggcac
     2161 tccaacgggt tctgctatcg tgcctactat caaaatgagt tctaatactt tttgttatga
     2221 aaatatgaat gatgctattg atattaacgc aggaagcatt atagatgggg taaaaacaaa
     2281 agaagaagtg cgtgatgagc ttatagaatt aatcgtgcga atttcagatg gagaattggt
     2341 aaaagcagag cttaacgagc aaaatgattt ttcagtttgg agacttgcta caacttgtta
     2401 aagggtaaag tgatgaaaca tgcaaattca ataaagttag agttagtatg taaaaaaata
     2461 tcttggcgta ttttgccttt gattgttttg atgttttgtc tttctatgct tgataggaca
     2521 aatattagct ttgtgaaatc tcatatagaa attgatgcag gcatcggtga ggctgcttat
     2581 gctttgggtg ctggaatatt ttttataggt tatgccattt ttgaagtgcc ttcaaattta
     2641 tttttgcata aattaggagc aaaaatttgg ttgagccgta taatgatcac ttggggtctt
     2701 gtaactatgg caatgatttt tatacaagga gaaataagtt tttatgtatt aagattttta
     2761 ttgggtttaa ctgaagcagg ttttagtcca ggcattattt tataccttag ttattttttc
     2821 ccagctatat atcgatctaa ggtttatgga atttatcaaa tgggagttcc aattgctttt
     2881 gtttttggtt ctttaattag cggttttata cttgattata caccaaatat atattttaaa
     2941 aattggcaat ggatgttttt aatagaagga ggtattaccg ttttagtagg tattttttgt
     3001 ttattttatc ttgattcaca tccaaaagat gcaaaatggt tagatataaa agaaaaagat
     3061 attttgctaa aacatattga aatttccaat actaaagcta aggattattc tataaaagat
     3121 atttttaaaa gtattttggt gtggaaattt gtatttgttt atttttgtat tcaattaagt
     3181 gtttatggag tgctttttta tttaccaagt aaaattgccc aaatattgca aataaatgta
     3241 ggttttgaag ttggactttt aaatgccata ccttggattt ttgtttttat cgccttgcca
     3301 atatttacct cattggctga taaaaaacat tcttggaatt tacatgcgat tttattttta
     3361 ctgctagcaa gtttgagcat gatagcttca acttttgtta caaatttggc ggcattttta
     3421 ttttttatta gcttggctgc tataggtttt atagtcattc agcctatatt ttggaatttg
     3481 ccaactcaag ttttaaaagg aaaaggagcc gcggctgcta ttgctcttat aggatccttg
     3541 ggaaatttag gaggttttgt agctcctact ttaaaaacat atatagaaaa tcattttgga
     3601 gttgagtttg gacttatagt gttagcattg atagcaattt taggtgtatt ggtattaata
     3661 catttaaaaa taactttaaa tttagataaa ggagaataaa tggatttaaa aattaaaaat
     3721 aaggtttgta ttattacagg aggggctaaa ggtattgggt atggtattgc taaattatgg
     3781 gcaagcgaag gcggaattcc tgtaattttt tcaagatcta tgcctaaaga gcacgataaa
     3841 gaattaaaaa aattatctag tgagtatgaa ttttatgaaa ttgatttaaa aaattatgag
     3901 caaattgaaa agcttgtaaa aaaagttgct atcaaacatg gtggaatcta tgctcttgta
     3961 aataatgcag gtacaaatga taatttacat attgaaaata caagtactca agatttgata
     4021 aaatcttatg aaaataatct ttttcattat tatactatga ccaaagaatg tttgccttac
     4081 attaaaaaag aacaaggcag tattttaaat atagtgagta aaacaggcat cacaggacaa
     4141 ggaagaactt cagcttatgc ttcggccaaa gcggctcaaa tgggttttac tagagaatgg
     4201 gcttgtgctt ttgctaagga taatgttagg gtaaatgcta tagctcctgc tgaagttatg
     4261 actcctcttt atgaaaaatg gctgcaaaat tttcctaatc ctaaagagca atatgaaaaa
     4321 atcgcaaaag ctataccttt aggccatcgt tttactacca tagaggaaat tgcaaataca
     4381 gcggttttta cacttagtcc ccttgcttca catactacag ggcaaatttt aatgccagat
     4441 ggaggttatg tgcatttaga tagagcatta aattgggatg aaaactaagg agtaaaaaat
     4501 gactgattct aaaaatataa aaatagctat tgttttggta acttctcttt tctttttatg
     4561 gggagtaagc tatggactta ttgatgtgat gaataaaaat tttcaaaatc atcttcatat
     4621 tagccagcat gaaagtggtt ttttacagtt tgcttatttt ggtgcttatt ttatcatagc
     4681 cttacccgca ggttatatag ccaatagatt ttcttataaa atgggaatca tttttggctt
     4741 agctctttat gccataggag ctttgcttat tatacctgct acaaatttgg cttcttttca
     4801 tttgtttttg tttgcgtttt ttattttagc ttgtggtatt ggttctttag aaactagtgc
     4861 aaatccctac atgacaaagc ttggtgatga aaaaaatgcg agttttagaa tcaatgctgc
     4921 gcaaagtttt aatggtttgg ggcaatttgt aggacctatt ataggcggag ctttattttt
     4981 atctattact aaacaagaag agggtgcgag taaagagcaa atcgaggctg cattggtagc
     5041 taatatggga aatgtccagc ttgtttatat aggaattgct gtcattgtta ttttgatttt
     5101 aattgctttt gttgcaaata agcttccaga aggaagtgcg gtaagtgatg attataagca
     5161 aaaagatgat tctaagccca tatatgtttt taaacacaga cattttaact tagggctttt
     5221 agcgcagttt ttgtatatag ccaatcaagt tgcagcagga gcttttttta tcaattatgt
     5281 tgtagaacat aatgaaggtt taaaagatgc gcaaggtgct tattattttt ctatagcttt
     5341 gattgcattt atgctagggc gcattgtttc tactcctttg atgaagataa tcaaaggtga
     5401 aaaaatttta ggattttatt ctctaatcaa tgtgcttata tgctttagct tgtattttgc
     5461 tagcgggttt tttagcatag tgcttttaat agctttattt ttctttatgt ctatttcttt
     5521 tcctactatt tttgcggtag caacaaaaaa tttaccttta aatcaagtaa aactaggcgg
     5581 ttctttgctt gtgatgagca tagtaggtgg agcaattatg cctataatta taggttttat
     5641 taatgatcat tatggtacag gcgctgggta tttagcaatg gcacctttgt ttttatatgt
     5701 ggcttggtat ggctttatag gctcaaaagt gagaaaaaat gcaaaagatt tttgatgctc
     5761 atctacacct ttgggatttg gaaaaaatac ctatttcatg gataaaagac gatgaaaaat
     5821 tagagcaaaa ttatgatttt tttaggatga aacaagaata taaagaattt gaatttatag
     5881 gtgctatgta tgttgaggtt aatagtgatg atttagaaaa ggaagctttg tttgctttgg
     5941 agcaaaaaaa gcttcataat cttttgtttt gtttagcgga ttttaagcat aaagaagagc
     6001 ttagttcttt tagggaagta atgcacacga gcaaaaaagg agctaaaaga ctatttgaag
     6061 cagactttga agaaaaaata gaaattttaa aaactttcaa tatacctttt gaggcttgta
     6121 ttaaaaatga agagcttggt tttttagaaa aatttttaag taaaaatcca aatttaaaag
     6181 tggttttaaa tcatctagga agtccaaaaa taaatcgttt aaatgaatac aaaaaagatt
     6241 taagtttttt gaaaaaattt caaaatttat atatcaagct ttctattcct gatggttttt
     6301 cgcaagaaac tcctaaggaa tttatttttg agctttttgc ttttttaaaa gaaaatttta
     6361 gtgagaataa atttatattt gggagcaatt atccagtggc aaagataact ccagctaagt
     6421 gggccaagct tattatagag agtaaaattt ttgatgatct agataaaata ttttacaaaa
     6481 atgctttatt aatttataaa ggaggatgaa tgcaaagata cggtcaaatc ataaaaataa
     6541 aaaaagaaaa aatagaagaa tacaaagagc ttcacacaaa gccttatgaa ggggtttgtg
     6601 agatgattaa ggaatgcaat atacaaaatt attccattta tttgtttggg gaatatttat
     6661 ttgcatattt tgaatatata ggtgctgatt ttgaagcaga catggctaaa atggcaagag
     6721 atgaaagcac acaaaaatgg tggaaagtaa cagatccttg tcaaatatct ttaggctatg
     6781 caggacaaaa atggctaaat atggaagaag tatttcactt agactaaaaa aggagaaaaa
     6841 atgacaactt atttaaatta tattgatgga aagtttatcc cacataatgg agaatttatc
     6901 gaagttttaa atccagctac caaagaagtg atttcaagag tagctagcgc ttctttagaa
     6961 gatactaaaa gagcgattga agcagccaaa aaagcacaaa aagtttggga ggctaaacca
     7021 gcgattgaaa gagcaaatca tttaaaagaa atagctagtt aatacgcaaa aatgctaatt
     7081 tcttaaccga agttttaatg caagagcaag gaaaaaccag agttttggct agcatagaga
     7141 ttaattttac agcagattat atggattata cggccgaatg ggctagaaga tatgagggtg
     7201 aaatcataca aagcgatagg gctaatgagc atatatattt atataaaagt gctattgggg
     7261 taattggtgg aattttacct tggaattttc catttttctt aatcgcaagg aagatggcac
     7321 ctgctttact aacaggaaat actattgtta taaagccaag cagtgaaact ccaaacaatg
     7381 cttttgaatt tgcaaagctt gtttcgcaaa gttctttacc aaaaggtgtt tttaacttag
     7441 ttgcaggtaa aggcagtgta gtaggatatg aattatcaag caatgaaaat ataggtatgg
     7501 taagtcttac aggaagtgtt gaagcaggga ctagagtaat ggaagctgca gctaaaaata
     7561 ttatcaaagt ttctttagaa cttggtggaa aggcgccagc tatagtgtgc aaagatgcgg
     7621 atattgattt agcagtagaa gcgattaaag caagtagaat ttgcaataac ggacaagttt
     7681 gtaattgtgc tgaaagagct tatgtgcata caagcgttta tgatgaattt gtagacaaat
     7741 ttgtaaaagc catgagtaaa gtaagtgttg gaaatacctt aaaaggtgat tttgatatgg
     7801 gaccattggt caatcaagca ggagttgata atgctttggc aatgcttcaa agagctacag
     7861 ctaaaggagc gattgtagaa tgtggtggaa aaatcactga tacaagtggg tattattttc
     7921 ccgcaagcgt tcttactaat gttaaacacg aagatgagat catgcaaaaa gaaatttttg
     7981 ctccgatttt acctattgct aaatttgata cacttgatga agttattgat atggcaaatg
     8041 attgtgaata tggtcttaca agttctattt atacacaaaa tttagatata gcaatgagag
     8101 ctagcagaga aattaaattt ggtgaaactt atattaatcg tgaaaatttt gaggctatgc
     8161 aaggttttca tgcaggcttt agaaaaagtg gcataggcgg agctgatgga aaacatggtc
     8221 ttgaagaata tttagctacc catgtggtat atttgcagta taatactaat aaacaatgat
     8281 ttttatccta tctaaatttt tagataggag ttattataat cttggaatca agtatgatgc
     8341 tttataacta tggattaaac acttttttag taatttctta aaatcaattt tggaattttt
     8401 cattttgtct aaaatgagta agattatttt tataagtaaa
//
LOCUS       DAPIYB010000071         8233 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.072, whole genome shotgun sequence.
ACCESSION   DAPIYB010000071 DAPIYB010000000
VERSION     DAPIYB010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8233
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.072"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..197)
                     /locus_tag="RJ318_001353"
     CDS             complement(<1..197)
                     /locus_tag="RJ318_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431208.1"
                     /translation="MDERILEFIKNEQLLSWAMIDEKGVYTASAFYAFDEKNLAFIIA
                     SHEDTKHIRLASENSSIALNIA"
     gene            272..835
                     /gene="ciaI"
                     /locus_tag="RJ318_001354"
     CDS             272..835
                     /gene="ciaI"
                     /locus_tag="RJ318_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular survival protein CiaI"
                     /protein_id="HDV7431209.1"
                     /translation="MQIDASKNQSFSMDYTTKSGKHLALSMYDNQSVSYANNEEGKTL
                     NLKRQYGFSFTFEGSKLTQNDLDEIKNAMKEVEPMIKDFLANSKVGELKPKEIIESAM
                     QMANVLPTPNDENHQNAIMNNFTNKLSDLLKQNQTDDKDINASMLEDSKKLLDEVLEQ
                     MKKQLEKQQEKAKENQDKTDDSLNLYA"
     gene            872..1561
                     /gene="dut"
                     /locus_tag="RJ318_001355"
     CDS             872..1561
                     /gene="dut"
                     /locus_tag="RJ318_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTPase"
                     /protein_id="HDV7431210.1"
                     /translation="MTNIEILENMLKLQQKLNDETNGLNWENGYTKEGKLISWRRCIY
                     MECAELIDSFAWKHWKNISNPTNWENVRIEIVDIWHFILSLLLEEYRDKNNKDFKAIA
                     TEVNAVSVFQDFCKEEEYPNEGDIYGILNDIELIIHKCSGFGFNLGELLSTYFTLAIK
                     CGLNLEILYKTYIGKNVLNIFRQNNGYKDGSYKKTWNGKEDNEVLAQILEQELDFDTI
                     YKKLEECYKKA"
     gene            1563..2276
                     /locus_tag="RJ318_001356"
     CDS             1563..2276
                     /locus_tag="RJ318_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HDV7431211.1"
                     /translation="MDILKLAIKDFLSLKFLKFALIPLIFSLILMLFLGVLGFSALLD
                     YFNSLFSVGEDSFWAWFYALHFVQILITIISFLFSGFIVVFASVFLALFITSFLTPFI
                     AKEINQKYYHYDNTNEVSTLKTIFEIFKIFIKFIGILLLCTLALFLPFINIFVYYLAF
                     YYLFHKLLMIDVTSTILDKESFKNFHSDFSPLEFKFSTLCFYLLSSVPLLGLFLQVFF
                     VIFLTHLSYQRILKLKAKA"
     gene            complement(2259..3224)
                     /gene="tilS"
                     /locus_tag="RJ318_001357"
     CDS             complement(2259..3224)
                     /gene="tilS"
                     /locus_tag="RJ318_001357"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDV7431212.1"
                     /translation="MQIKDEILALLKRGKNLLAFSYGSDSSVLFYLLMQEKIDFDLVM
                     INYKTRKNSDLEELKAKELALKFHKKIFIKHAPKFQSNFEKKARDFRYDFFEKICLEQ
                     GYDHLILAHHLNDQFEWFLMQLSRGAGLAEILGMQECEKRSNYTLLRPLLFISKDEIS
                     SFLKEKDIFYFHDESNENEKYFRNYIRKNFSNAFVSEFHQGLKRSFSYLDEDRKKLYD
                     FENIKEIQGLLICPKNESLIARAVKMKGLLLSTAQRKELLKGDCVLGGKIALAYKNEQ
                     AIVFEYETCQKLPKNFKEECRIAKIPRLLRAYLYNHKIDISSLSF"
     gene            complement(3214..4533)
                     /gene="rimO"
                     /locus_tag="RJ318_001358"
     CDS             complement(3214..4533)
                     /gene="rimO"
                     /locus_tag="RJ318_001358"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDV7431213.1"
                     /translation="MSKLYLMSLGCNKNLVDSEIMLGRLSAYELCDEPSKADVIIVNT
                     CGFIDSAKKESINAILDLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDY
                     ERIDEMILKKTNLFSNSTYLQSENSKRIITGSNSHAFIKIAEGCNQKCSFCAIPSFKG
                     KLKSREISSIIAELKDLVARGYKDFSFIAQDTSSYLFDKGEKDGLIRLIDEVEKIKGI
                     RAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHISDNMLKIMKRGANSTRLKEM
                     LNLMKSAPNSFLRTGFIVGHPGESEADFEELCEFVKDFGFDRVSVFAYSKEEDTAAFD
                     MEQVPFKVINKRLKIIEKIVDEVIEKSFEKEVGQKRLVVCTGESSEGEFFIAAKDLRW
                     DREIDGEILINESECGNLEMGQIYECEILQNLDKKLLAKALRKVDAN"
     gene            4607..5704
                     /gene="prfB"
                     /locus_tag="RJ318_001359"
     CDS             4607..5704
                     /gene="prfB"
                     /locus_tag="RJ318_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDV7431214.1"
                     /translation="MDNYEFSELLKTLKNKVGNIASIIKPENIQTRLKEIEELENSPS
                     FWSDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLANSENDTETLEALFNDA
                     PKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGF
                     KVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSS
                     VMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQND
                     RSQHKNKATAFKMLKSRLYELELMKQQDSANTGEKSEIGWGHQIRSYVLFPYQQVKDN
                     RSGEAFSQVDNILDGDIKKMIEGVLIALKAE"
     gene            complement(5862..6068)
                     /locus_tag="RJ318_001360"
     CDS             complement(5862..6068)
                     /locus_tag="RJ318_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002927569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431215.1"
                     /translation="MFDLGNQEIMKKYPNHKLYDYTSVRTISDINNPEGKIKEMKRDL
                     EIDKTPYSNYVFLLNPNDKKTIKL"
     gene            complement(6298..7416)
                     /gene="truD"
                     /locus_tag="RJ318_001361"
     CDS             complement(6298..7416)
                     /gene="truD"
                     /locus_tag="RJ318_001361"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDV7431216.1"
                     /translation="MNLEEENTIFKPLYSLKHSPINAYFSKNSDDFVVRERPLYEFSG
                     KGEHLILHINKKDLTTNEALKILSEASGVKIRDFGYAGLKDKQGSTFQYLSMPKKFES
                     FLSNFSHPKLKILEIFTHENKLRIGHLKGNSFFIRLKKVLPSDALKLEQALMNLDKQG
                     FTNYFGYQRFGKFGDNYKEGLEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELS
                     HFANDFSEKELIQIYKISKEEAKELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAEL
                     GRFKARDVSAMGLLIGAKAYETGEGLALNLENEIFKDTLEFKAKMQGSRRFMWGYLEE
                     LKWRYDEEKAHFCIEFFLQKGSYATVVLEEILHKNLFE"
     gene            complement(7385..8206)
                     /locus_tag="RJ318_001362"
     CDS             complement(7385..8206)
                     /locus_tag="RJ318_001362"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDV7431217.1"
                     /translation="MNKEDFIIKAFLNKKNGDDGAIIDDWCFSKDLFFENVHFKREWF
                     SLEQIATKAMLVNISDAISMNAVPKYALLGLALPKNLSENEIKALQKGFLKTARKFNI
                     KIIGGDTISNDKIDISLTIISKINDKAVFRKGLKKGHLLAYTGKLGRSLKGLEILQNG
                     GTLKPNHVFIKPKLRASFFYEIAPLISCAMDISDGLSKDLSRLLALNKCGISWFKKLD
                     DYALYSGEEYEILFAFDEKERQNIEIIAKKHGVKLNIFGKAVKGKYEFRGREHHF"
BASE COUNT         2839 a         1430 c         1098 g         2866 t
ORIGIN      
        1 gctatattaa gtgctatact tgaattttca ctggctaatc ttatatgctt agtatcttca
       61 tgcgaagcga taataaaagc taaattcttc tcatcaaaag cataaaaagc actagctgta
      121 taaacacctt tttcatcaat catagcccaa gataaaagct gctcattttt tataaattct
      181 aaaattcttt catccatatt gtaaaaatta tactaaaata tttttaaaaa taaccgattt
      241 ttaatttaaa ctataaatat aagaggaaga aatgcaaatt gatgctagca aaaaccaaag
      301 tttttcgatg gattatacaa caaaaagtgg caaacattta gccttatcta tgtatgacaa
      361 tcaaagcgtg agttatgcaa ataatgaaga aggtaaaact cttaatctta agcgtcagta
      421 tggctttagc tttacttttg aaggctctaa gctcacacaa aatgatctcg atgagattaa
      481 aaatgctatg aaagaagttg aacctatgat caaagacttt ttagcaaatt ctaaagtcgg
      541 agagttaaag ccaaaagaaa ttatagaatc agctatgcaa atggcaaatg ttctaccaac
      601 accaaatgat gaaaaccatc aaaatgctat tatgaataat tttacaaata aactcagtga
      661 tttactaaaa caaaatcaaa cagatgataa agatatcaat gcttccatgc ttgaagatag
      721 caaaaaactt cttgatgaag ttttagaaca aatgaaaaaa caacttgaaa aacagcaaga
      781 aaaagccaag gaaaatcaag ataagacaga tgatagttta aatctttacg cttaaatcat
      841 ataatattaa aaattatcaa ggagttttta aatgacaaat atcgaaattt tagaaaatat
      901 gctcaaactc caacaaaaac tcaacgatga aacaaacggc ttaaattggg aaaatggcta
      961 caccaaagaa ggaaaactga tcagttggag acgctgtatt tatatggaat gtgcagaact
     1021 tatagactct tttgcatgga aacattggaa aaacatttca aatccgacaa attgggaaaa
     1081 tgtgcgtata gagattgtcg atatttggca ttttatttta agtcttttac ttgaagagta
     1141 tcgcgataaa aacaataaag atttcaaagc tatagccaca gaagttaatg ctgtaagcgt
     1201 gtttcaagat ttttgcaaag aagaagaata ccctaatgag ggtgatattt atggcatttt
     1261 aaatgatata gagcttatta tccataaatg cagtggtttt ggatttaatc ttggagaatt
     1321 actttcaacc tattttaccc tagctattaa atgtgggcta aatcttgaaa ttctttataa
     1381 gacctacata ggtaaaaatg ttttaaatat ttttagacaa aacaatggtt acaaagatgg
     1441 cagctataaa aaaacttgga atggcaaaga agacaatgaa gttttagctc aaattttaga
     1501 acaagagctt gattttgata ctatttataa aaaactagaa gaatgctaca aaaaggcata
     1561 atttggatat tttaaaactt gcaatcaaag attttttaag tcttaaattt ttaaaatttg
     1621 ccttaattcc tttgattttt agccttatac tgatgctttt tttaggagta cttggctttt
     1681 cggccttgct tgattatttt aattctttat ttagcgttgg agaagattcg ttttgggcgt
     1741 ggttttatgc tcttcatttt gtacaaattt taatcaccat cataagtttt ttattttcag
     1801 gttttattgt tgtttttgct tcggtttttt tagccctttt tatcacttct tttcttactc
     1861 cttttatcgc taaagaaatc aaccaaaaat attaccatta tgataataca aacgaagttt
     1921 caaccttaaa aactatcttt gaaattttta aaatatttat aaaatttata gggattttat
     1981 tgctttgcac cttggcttta tttttgcctt ttatcaatat ttttgtatat tatcttgctt
     2041 tttattatct ctttcacaaa cttttaatga ttgatgttac aagcacgatt ttagacaaag
     2101 aaagttttaa aaattttcat tctgattttt cgcctttaga gtttaaattt agcactcttt
     2161 gtttttatct actctcatca gtaccacttt taggactttt tttgcaagta ttttttgtga
     2221 tttttctcac acatttaagc tatcaaagaa ttttaaaact aaaagctaag gcttgaaata
     2281 tcgattttgt gattgtataa ataagctctt aaaagtcttg gaattttagc tattctacac
     2341 tcttctttga aatttttagg taatttttga caagtttcat actcaaaaac aatagcttgt
     2401 tcgtttttat atgcaagtgc tattttacca cctaaaacac aatcaccctt taaaagctct
     2461 tttctttgtg ccgtgcttaa aagcaaacct ttcattttca ccgctctagc aatcaagctt
     2521 tcatttttag ggcaaataag aagtccttga atttctttga tattttcaaa atcataaagt
     2581 tttttcctgt cttcatcaag ataagaaaaa cttcttttta aaccctgatg aaattcactc
     2641 acaaaggcat tagagaaatt ttttcttata taatttctaa aatatttttc attttcatta
     2701 ctttcatcat ggaaataaaa aatatctttt tcttttaaaa aagatgaaat ttcatcttta
     2761 cttataaaga gtaaagggcg taaaagtgta taatttgagc gtttttcaca ttcttgcata
     2821 cctaaaattt cagccaaacc tgcgcctcgt gaaagttgca tcaaaaacca ttcaaattga
     2881 tcgtttaaat gatgggctaa gataagatgg tcataacctt gctcaagaca aattttttca
     2941 aaaaaatcat agcgaaaatc tctggctttt ttttcaaagt tactttgaaa tttaggagcg
     3001 tgttttatga aaattttttt atgaaatttt aaagcaagtt ctttggcttt taactcttct
     3061 aaatcactat tttttctagt tttgtaattt atcatcacaa gatcaaagtc gatcttttct
     3121 tgcattaaaa gataaaaaag cacactagaa tcacttccat aagaaaaagc gagtaaattt
     3181 ttaccccttt ttaaaagggc taaaatttca tctttaattt gcatctactt ttcttaaagc
     3241 cttagcaagg agttttttat caaggttttg taaaatttca cattcataaa tttgccccat
     3301 ttccaaattt ccacattcgc tttcattaat aagaatttcc ccatcaatct ctctatccca
     3361 tcttaaatct ttagctgcga taaaaaactc tccctcgcta ctttctcctg tgcaaactac
     3421 taaacgcttt tgccctactt ctttttcaaa acttttttct atcacttcat caacaatttt
     3481 ttctatgatt ttaagccttt tattgatcac tttaaaaggc acttgctcca tatcaaaagc
     3541 ggctgtatct tcttccttag aatacgcaaa aacactcacc ctatcaaaac caaagtcttt
     3601 aacaaactca caaagctctt caaaatctgc ctcactttca cctggatgcc ctacgataaa
     3661 gcccgtgcgt aaaaagctat ttggcgcact tttcattaaa tttagcattt ctttaagtct
     3721 tgtgctattt gccccacgct tcatgatttt aagcatatta tcacttatgt gctgcaaagg
     3781 catatcaaaa taatttacaa aaatttcaga agctataatg cgtttaatca aagcttcact
     3841 cgcactcgta ggataaagat ataaaattct agccgctctt atgcctttga ttttttccac
     3901 ctcatcgatt aagcgtataa gcccatcttt ttcaccctta tcaaacaaat aagaactcgt
     3961 atcttgtgca ataaaagaaa agtccttata acctctagct accaaatctt taagctcagc
     4021 tataatgcta cttatctcac gagattttaa cttgccttta aaacttggga tggcacaaaa
     4081 agagcatttt tgattacaac cttcggcgat ttttataaaa gcatgggaat ttgaacctgt
     4141 gataatacgt ttggaatttt cactctgcaa ataagtcgaa tttgaaaata aatttgtttt
     4201 tttaagtatc atttcatcga ttctttcata atcacccaca cctgtgaaaa gatcaacctc
     4261 aggaagttct ttcataagtt cttcgcggta acgctgcatc aaacaacccg taaccaccaa
     4321 aagagaatct ttttttcttt gttcgtgcaa atccaaaatc gcattaatac tttctttttt
     4381 tgcactatcg ataaaaccac aagtatttac gattataaca tcagctttgc ttggttcatc
     4441 gcaaagttca taagcactaa ggcgccctag catgatctca ctatcgacta aatttttatt
     4501 acaacctaaa gacataagat aaagttttga catttttttc ctatattaaa gttttctttt
     4561 gatataattt ttgactttaa aaatataatt atagcaaaga aattttatgg ataattacga
     4621 atttagcgaa cttttaaaaa ctttaaaaaa caaagtcggc aacatagcct ccatcatcaa
     4681 gcctgaaaat atccaaacaa ggcttaaaga aatcgaagag cttgaaaatt ctccttcttt
     4741 ttggagtgat gttaaacaag caggaatcat aggtaaagaa aaaactaaaa tcaccaatct
     4801 acttaaaaac tatgaaaatg cttttaatgc tctaaatgac gcaagcgaac ttttcgatct
     4861 ggccaatagc gaaaacgata cagaaacact tgaagcttta tttaatgacg caccaaaact
     4921 tgaagatacc atcacaagtc ttgaaatttc catgctttta agcggggaaa atgatggtaa
     4981 aaatgccatt gtttccattc acccaggtgc aggtggaacg gaaagtaatg actgggcaag
     5041 catactttat agaatgtatt taagattttg tgaaagagaa ggttttaaag tcgaaacttt
     5101 agactttcaa gaaggcgaag aagcaggact taaagatgtg agctttttag ttaaaggaga
     5161 aaatgcttat ggttatttaa aagctgaaaa tggtatccat cgtttggtaa gaacttctcc
     5221 ttttgatagt gcaggacgcc gtcatacaag cttttcaagt gttatggtaa gccctgaact
     5281 tgatgatgat atagaaattg aaatcgaaga aaaagacata agaatagatt attacagagc
     5341 aagcggtgca ggcggacaac atgtcaataa aacagaatca gctgtgagaa tcacacattt
     5401 tccaaccggc atagtcgtac aatgccaaaa tgacagaagt cagcacaaaa acaaagccac
     5461 cgcttttaaa atgctaaaat ctcgccttta tgaacttgaa ctcatgaaac aacaagatag
     5521 tgctaatact ggagaaaaaa gcgagatagg ttgggggcat caaatccgtt cttatgtgct
     5581 tttcccttat cagcaagtca aagacaatcg cagcggagaa gctttttctc aagtggataa
     5641 tatccttgat ggggatatca aaaaaatgat agaaggcgtt ttaattgcct taaaagcgga
     5701 gtaacagctt aaaaataagt aatttctgca aaatgtcggt ataaaaagaa ttagaaagat
     5761 agcgggattt tcccgcttgt tttattatct tgcataaaac ctaagagcat cattcacaga
     5821 acaataaact cttttcttaa aatctttatc gcaataaaca ctcacaactt tatagtcttt
     5881 ttatcgtttg gatttaataa gaaaacatag tttgagtatg gagttttatc tatttctaaa
     5941 tcacgcttca tttctttaat tttgccttct ggattgttaa tatcactaat tgttctgact
     6001 gaagtataat cataaagttt atgatttgga tattttttca taatctcttg attgcctaaa
     6061 tcaaacatag cttgatcgtt gccattgttt ttttactcga ctaaatcgcc atcgccacaa
     6121 cctataatca aagtcatagc tcctaaagcc aaagcacttg ttaaaatctt tttcattatt
     6181 tttgctccta gttttaaaat taaattaata taactatacc taaatttaaa atttaaatat
     6241 catttttgca ataaattcta aagtaaaaat cacgtaaaaa tttaactcat aattatttca
     6301 ctcaaacaaa tttttatgca aaatttcttc taaaaccaca gtagcataag agcctttttg
     6361 caagaaaaac tctatacaaa aatgagcttt ttcttcatca taacgccatt ttaactcttc
     6421 taaatatccc cacataaagc gtcttgaacc ttgcatttta gccttaaact ccaaagtatc
     6481 tttaaaaatt tcattttcta aatttaaggc caaaccttct cctgtttcat aagccttagc
     6541 accgattaaa agccccatgg cgcttacatc tcttgcctta aaacgcccaa gctcagcact
     6601 taaatcctcg cataaaaaac actttccaaa aggataatgc cctaaaacct caccttttaa
     6661 aagcttaaaa aattgttctt gttttttaag ttccttagct tcttctttag aaattttata
     6721 aatttggatc aattcttttt cgctaaaatc atttgcaaaa tgtgataact ccactctttt
     6781 actcaaatag cgattaaaaa gctcactttg aaaagctgaa attaaaaact ctttcatttt
     6841 tacatttttc atttttttgc cacgcaaaat ttcaagccct tctttataat tatccccaaa
     6901 ttttccaaaa cgctgataac caaaataatt cgtaaaacct tgcttatcca aattcatcaa
     6961 agcttgttct agttttaaag catcgcttgg taaaactttt tttaagcgta tgaaaaaaga
     7021 atttcctttt aaatggccta ttcttagctt gttctcatgg gtaaaaattt ctaaaatttt
     7081 aagtttagga tgagaaaaat ttgacaaaaa actctcaaat tttttaggca tagaaaggta
     7141 ttgaaaggtt gatccttgct tgtctttaag ccctgcataa ccaaaatctc ttattttaac
     7201 cccgcttgct tcacttaaaa tttttaaagc ttcatttgtg gttaaatctt ttttattgat
     7261 atgcaaaata agatgctcac ccttaccgct aaattcatac aaaggccttt cacgcactac
     7321 aaaatcatcg ctatttttac taaaatacgc attaatagga ctgtgtttta aactatacaa
     7381 aggcttaaaa atggtgttct cttcctctaa attcatattt tcctttcact gcttttccaa
     7441 agatatttaa tttcacgccg tgttttttgg ctattatttc tatattttgc cgttcttttt
     7501 catcaaaagc aaacaaaatt tcatattctt ctccgctata aagcgcataa tcatcaagtt
     7561 ttttaaacca agaaataccg catttattta aagctaaaag ccttgataaa tccttgctta
     7621 aaccatctga aatatccata gcacaagaaa ttaaaggtgc gatttcataa aaaaaactag
     7681 ctcttaattt tggctttata aatacatggt ttggttttaa agtgccccca ttttgtaaaa
     7741 tttcaagccc ttttaaactt cgtcctaatt ttcccgtata agcaagtaaa tgcccctttt
     7801 ttaaaccttt tctaaaaaca gctttatcgt taatctttga aatgatagta agactaatgt
     7861 ctattttatc attgcttata gtatcaccgc ctatgatttt tatattaaat ttcctagctg
     7921 tttttaaaaa acctttttgc aaggctttga tctcattttc gcttaaattt tttggtaaag
     7981 caagtcctaa aagtgcgtat tttggtacag cattcattga aatagcatct gagatattaa
     8041 caagcattgc ttttgtagca atttgctcta agctaaacca ctctctttta aaatgcacat
     8101 tttcaaaaaa caaatcctta ctaaaacacc aatcatcaat aatagctcca tcatcaccat
     8161 tttttttatt taaaaaagct ttgataataa aatcttcttt gttcataatg cgtgatttta
     8221 taaaatttcc ttt
//
LOCUS       DAPIYB010000072         8066 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.073, whole genome shotgun sequence.
ACCESSION   DAPIYB010000072 DAPIYB010000000
VERSION     DAPIYB010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8066)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8066)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8066
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.073"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            94..480
                     /locus_tag="RJ318_001363"
     CDS             94..480
                     /locus_tag="RJ318_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDV7431218.1"
                     /translation="MPTINQLVRKERKKVLEKSKSPALKNCPQRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGAL
                     DTAGVAKRTVSRSKYGAKRPKAGAAK"
     gene            550..1020
                     /gene="rpsG"
                     /locus_tag="RJ318_001364"
     CDS             550..1020
                     /gene="rpsG"
                     /locus_tag="RJ318_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDV7431219.1"
                     /translation="MRRRKAPVREVLPDPIYGNKVITKFINSLMYDGKKSTATTIMYG
                     ALEAIDKKGGEKKGIDIFNDAIENIKPLLEVKSRRVGGATYQVPVEVRPARQQALAIR
                     WIISFARKRSERTMIDKLAAELLDAANSKGASFKKKEDTYKMAEANKAFAHYRW"
     gene            1033..3108
                     /gene="fusA"
                     /locus_tag="RJ318_001365"
     CDS             1033..3108
                     /gene="fusA"
                     /locus_tag="RJ318_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDV7431220.1"
                     /translation="MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVH
                     DGAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGA
                     VAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPV
                     PLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEA
                     VSETSDELMEKYLGGEELSLEEIKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVV
                     AYLPAPDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCL
                     ESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEK
                     DKVILERMDFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIIS
                     GMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHV
                     FLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDVKVTVY
                     DGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNK
                     RRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVA
                     DEIIKKRNG"
     gene            3137..3213
                     /locus_tag="RJ318_001366"
     tRNA            3137..3213
                     /locus_tag="RJ318_001366"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3171..3173,aa:Arg,seq:cct)
     gene            3231..3380
                     /locus_tag="RJ318_001367"
     CDS             3231..3380
                     /locus_tag="RJ318_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431221.1"
                     /translation="MIKIAFFITFVISFLAAQSPVNFKEDNNITKERNIFKEQSPKRI
                     KIPTH"
     gene            3386..4087
                     /locus_tag="RJ318_001368"
     CDS             3386..4087
                     /locus_tag="RJ318_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HDV7431222.1"
                     /translation="MSDLITLAQLSQGYRYNSDSLILADFILKQGIKGAVFDVGAGCG
                     IIGILLKKNIANLSLSLIDIQKENIKLIEKNLKSNKIQGDIFHDDFNQFQIIKKFDFI
                     VCNPPFYRQGAYKSEDQHKAISKFQEFLPLHSFLAKTNSMLKPNGTLYFCYEALALDE
                     ICFILKDMKMKITKLCFVHTHQNKKARLVLIQVKKGSKSPCEILPPFFVYENEILSKQ
                     MQEIHLRFRLKSYDI"
     gene            4077..4451
                     /locus_tag="RJ318_001369"
     CDS             4077..4451
                     /locus_tag="RJ318_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HDV7431223.1"
                     /translation="MIFDKNFSYAFDENACEKCGGKCCTGESGNIFASKEELEALRKH
                     LNLESKEFAEKYLRKVGFKMSFKEVECEDGFACIFFDTQKRNCSIYDFRPKQCRTFPF
                     WEYFKTHQKELEKECIGICYLS"
     gene            4424..5701
                     /locus_tag="RJ318_001370"
     CDS             4424..5701
                     /locus_tag="RJ318_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent nuclease subunit B"
                     /protein_id="HDV7431224.1"
                     /translation="MYRYLLFVLAAFFLAACGSSKINVVYPDYTKYKSNDFDLRVMKA
                     YNYEYYKQYKEARDEFLSLYQDYNNTNFLENAFLLSLANNLDKQAELDNLAKPYLNQN
                     DNLKRLSALYALNSNDINNAQKLMKELLTKKDSDPRNLELYGDILVKKNDLKNATKYY
                     RSAYNQVQNEEILFKLIGIYAILNDTLNIKNVLEFSRKTNGCTLKTCVLLAKIYFDEK
                     NIEALKSIYKELYQLTKNKSFVLALVELLNSQGKTEEALKISLQYDLDDDIKLALYQN
                     LKRFDDAKKMSLALYHKTKNKEYLLRAAVFEFEAANEAKKITPKVIDSVKEKFEQAID
                     KDSNALYLNYYGYLLIDYDLDVKKGIELVKLALEKDPQNLYYLDSLAWGYYKLGDCKQ
                     AWEILKQTLDDKEFANSDESKAHIKAIKACIKP"
     gene            5698..6474
                     /gene="trpC"
                     /locus_tag="RJ318_001371"
     CDS             5698..6474
                     /gene="trpC"
                     /locus_tag="RJ318_001371"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HDV7431225.1"
                     /translation="MILDKIFEKTKEDLKERKLKLPYDMLGRSLASNPFFPKDVIKAL
                     KRVEKEVKIIAEVKKASPSKGVIREDFDPLSIALNYEKNKAAAISVLTEPHFFKGSLE
                     YLSLIRRYTQIPLLRKDFIFDEYQILEALVYGADFVLLIAKMLSMKELKKLLEFARHL
                     GLEALVEIHDKEDLSKAIFAGADIIGINHRNLEDFTMDMSLCEKLIPQIPNSKIIIAE
                     SGLENKEFLEHLQNLGVDAFLIGEYFMREKDEGKALKALL"
     gene            6484..6969
                     /locus_tag="RJ318_001372"
     CDS             6484..6969
                     /locus_tag="RJ318_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HDV7431226.1"
                     /translation="MQYLYAPWRSEYFEKVKSICPFCDCANKIKSDEELGVIFRAKHC
                     FGVMNRYPYSAGHFMVIPYIHEEHIENLSDEIWQEMSYFVRLGVKILKEQIHANGVNI
                     GMNLSKDAGAGIAFHCHYHLVPRWSGDTNFITTIGETRVCGTNIEQVYQKLVLAFKNA
                     Q"
     gene            6959..7957
                     /gene="mnmH"
                     /locus_tag="RJ318_001373"
     CDS             6959..7957
                     /gene="mnmH"
                     /locus_tag="RJ318_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HDV7431227.1"
                     /translation="MLSEVEFVEFQKENFSLLIDARSPREFLHSHLIGALNFYALNDE
                     EYQEIGTIYKKNQALAKAMGASYICQNTTKHILEITQNFRIGEKVGIYCSRGGLRSKS
                     IAVILSELGFRVVRLKGGFKAYRTFVTHYFENEINFDFFALCGNTGCGKTELLEQLPQ
                     AINLEKMANHLGSSFGDILGKQPTQKAFEAELFHNIQNLENFAFIESESRKIGDIILP
                     FKFYEKMQKAFKIYCFCSLENRVRRIQKIYQEKMTPLKFQQCVQKISPYISLNLRQDL
                     LQSYERKEWQKLIVMLLEYYDKTYKKPDKIDLELNTDDILKAKEELLDHFKVQLLF"
BASE COUNT         2883 a         1047 c         1555 g         2581 t
ORIGIN      
        1 taaaagcatt taaattattt ctagtttata tttttgtaag taaattttag atatcatcca
       61 aagtttatta catttttaaa gaaaggaatt attgtgccta ccataaatca attggttaga
      121 aaagagcgca aaaaagtttt agaaaaatct aaatctccag cgcttaaaaa ttgtccacaa
      181 agaaggggag tttgcactag ggtttatact acaacaccta aaaaaccaaa ctcagcgtta
      241 agaaaagttg ccaaagtaag acttactagt ggctttgaag tgatcagcta tatcggcggt
      301 gaaggtcata acttgcaaga acacagcatt gttttagtgc gtggtggtag ggtaaaagac
      361 ttaccagggg ttaaatatca catcgttcgt ggtgctcttg atacagcagg tgttgcaaaa
      421 agaacagttt ctcgttctaa atatggtgct aaacgtccta aagcaggcgc tgcaaaataa
      481 tcattcatac agacaaatcc gttagatttg attttgtttg agtaaaattt aaaatttgaa
      541 ggaaaaataa tgagaagaag aaaagctccg gtaagagaag tcttgcctga tccgatttat
      601 ggtaataaag taatcacaaa atttattaat tctttaatgt atgatggtaa aaaaagcaca
      661 gctacaacaa ttatgtatgg tgctttggaa gctattgata aaaaaggtgg cgagaaaaaa
      721 ggtattgata tttttaatga tgcgattgaa aatattaagc ctttattaga agtaaaatct
      781 cgtcgtgtag gtggtgcaac ttatcaagtt ccagttgaag ttcgtcctgc tagacaacaa
      841 gctttggcga ttcgttggat tatttctttt gcaagaaaaa gaagcgaaag aactatgatt
      901 gataaacttg cagctgagct tttagatgca gcaaatagca aaggtgcttc atttaagaag
      961 aaagaagata cttataaaat ggctgaagca aataaagcat ttgctcacta tcgttggtaa
     1021 gaaggagtgt gtatgtcaag aagtactcct ttaaaaaaag ttagaaatat cggtattgct
     1081 gctcacattg atgcgggtaa aacgactaca tctgaaagaa ttcttttctt tacaggtatg
     1141 agtcataaaa tcggtgaagt tcatgatggt gctgcaacta tggactggat ggaacaagag
     1201 aaagagcgcg ggattactat cacttctgcg gctacaactt gtttttggaa agatcatcaa
     1261 atcaatctta ttgacactcc aggccacgtg gattttacaa ttgaagttga aagatctatg
     1321 cgtgttcttg atggtgctgt tgcggtattt tgttcagtgg gtggggtgca gcctcaaagt
     1381 gaaacagttt ggagacaagc aaataaatat ggtgttccaa gaatagtatt tgtaaacaaa
     1441 atggatagaa tcggtgcaaa tttctacaat gtagaagatc aaattcgcaa ccgtttaaaa
     1501 gctaatccag ttccacttca aattccaatc ggtgctgagg ataattttaa aggcgtaatc
     1561 gatcttgtaa ctatgaaagc tttagtttgg gaagatgata ctaagccaac ggattatgta
     1621 gaaaaagaaa ttccagctga acttaaagaa aaggcagaag aatatcgcac aaaaatgata
     1681 gaagcagttt ctgaaacttc agatgagttg atggaaaaat atttaggcgg agaagaatta
     1741 agccttgaag agattaaaac agggattaaa gcaggatgtt taagtctttc tatcgttcct
     1801 atgctttgcg gtacagcgtt taaaaataaa ggggttcaac ctttacttga tgctgttgtg
     1861 gcttatttac cagctcctga tgaagtggca aatatcaagg gtgaatatga agatggcaca
     1921 gaagtttctg taaaatcaac tgatgatggc gagtttgcag gacttgcatt taaaattatg
     1981 acagatccat ttgtaggaca acttactttc gtgcgtgttt atcgcggttg tttagaaagt
     2041 ggttcttatg cttataactc aactaaagat aaaaaagaaa gaattggtcg tttgttaaaa
     2101 atgcactcta acaaaagaga agagattaaa gtgctttacg caggcgaaat tggtgctgtt
     2161 gtaggactta aagatacttt aacaggggat actcttgcaa gtgaaaaaga taaggtaatc
     2221 cttgaaagaa tggattttcc agatccagtt atttctgttg cagttgagcc aaaaactaaa
     2281 gcagatcaag aaaaaatgtc tattgcttta aataaattag cacaagaaga tccaagtttt
     2341 agagtttcta cagatgaaga aagtggccaa actatcattt caggtatggg tgagttgcac
     2401 cttgaaatta tcgttgatag aatgcttcgt gaatttaaag ttgaagctga agtaggtcaa
     2461 ccacaagttg cttatcgcga aactattaga aaaactgttg aacaagaata caaatacgct
     2521 aaacaatcag gtggtcgtgg tcagtatgga catgtattct tacgccttga accacttgag
     2581 ccaggtagtg gatatgaatt tgttaatgat atcaaaggtg gagtaattcc aaaagaatac
     2641 attcctgcag ttgataaagg tgttcaagaa gcattacaaa atggtgtttt agcaggttat
     2701 cctgtggaag atgttaaagt aactgtttat gatggaagtt atcacgaggt ggattcatct
     2761 gagatggcgt ttaaacttgc tgcttctatg ggctttaaag aaggtgctag aaaagcaggt
     2821 gctgtgatct tagagcctat gatgaaagtt gaagtagaaa ctcccgaaga ttatatgggt
     2881 gatgttattg gagatcttaa caaacgccgt ggtcaagtaa atagcatgga tgagcgtggt
     2941 ggaaataaaa tcatcacagc attttgtcct ttggctgaaa tgtttggtta ttctactgat
     3001 cttagaagtc aaactcaagg tcgtgcgact tattctatgg aatttgatca ctatgatgaa
     3061 gttcctaaaa atgttgcaga tgaaatcatc aaaaaaagaa acggttaaat ttttagcggg
     3121 atttttcccg ctttctgtcc tcgtagctca gcaggataga gcgcaaaatt cctaattttg
     3181 aggccgtgag ttcgaatctc gccgtggaca ccattttatg gggtgttatt atgataaaaa
     3241 ttgctttttt tataactttt gtaatttctt ttttggcagc acaaagccca gtaaatttta
     3301 aagaagataa taatataaca aaagaacgaa atatatttaa agaacaatct ccaaaacgca
     3361 ttaaaattcc aacgcattaa aatatatgtc agatctgatt acgctagcac aattatcaca
     3421 agggtatcgt tacaatagtg attctttaat tttagctgat tttattttaa aacaaggaat
     3481 taaaggcgct gtttttgatg taggtgcggg ctgtggtatc ataggtattt tacttaaaaa
     3541 aaatattgca aatttaagtt tatctttgat tgatattcaa aaagaaaata taaaattgat
     3601 tgaaaaaaat ttaaaatcca acaaaataca aggcgatatt tttcatgatg attttaatca
     3661 atttcaaatc ataaaaaaat ttgacttcat agtctgcaat cctccatttt atagacaagg
     3721 agcttacaag agtgaagatc agcataaagc tataagtaaa tttcaggaat ttttaccctt
     3781 gcatagcttt ttagctaaaa caaattctat gcttaagcca aatggtactt tgtatttttg
     3841 ctatgaagct ttagctttag atgaaatttg ttttatttta aaagatatga aaatgaaaat
     3901 aacaaagctt tgctttgtac atacacatca aaacaaaaaa gcaagacttg ttttgataca
     3961 ggtaaaaaaa ggttcaaaat cgccttgtga gattttacct cctttttttg tatatgaaaa
     4021 tgaaatttta agcaaacaaa tgcaagaaat tcacttaaga tttaggttaa aaagttatga
     4081 tatttgataa aaatttttct tatgcttttg atgaaaatgc ttgtgagaaa tgcggtggaa
     4141 agtgttgcac tggagaaagt ggcaatattt ttgcgagcaa ggaagaatta gaagcattaa
     4201 gaaagcattt aaatttagaa agcaaagaat ttgctgaaaa atacttgaga aaagtgggct
     4261 ttaaaatgag ttttaaggag gtcgaatgtg aagatggctt tgcttgcatt ttttttgata
     4321 ctcaaaaaag aaattgtagt atctacgatt ttcgtccaaa acaatgcaga acttttccat
     4381 tttgggaata ttttaaaaca catcaaaagg aattagaaaa agaatgtata ggtatttgtt
     4441 atttgtctta gcagcctttt ttttggcagc ttgtggaagt tcaaaaatca atgttgttta
     4501 tcctgattat acaaaatata aaagcaatga ttttgattta agggttatga aggcttataa
     4561 ttatgagtat tataaacaat acaaagaagc cagagatgaa tttttaagtc tttatcaaga
     4621 ttataataat actaattttt tagaaaatgc atttttactt tctttagcaa acaatcttga
     4681 caagcaagca gagttagata atctagcaaa gccttattta aatcaaaatg acaatcttaa
     4741 gcgacttagt gctctttatg ctttaaattc aaatgatatc aacaatgctc aaaaacttat
     4801 gaaagagctt ttaacaaaaa aggatagtga tcctagaaat ttagagcttt acggagatat
     4861 tttggttaaa aaaaatgatt taaaaaatgc tacaaaatac tatagatctg cttataatca
     4921 agtgcaaaat gaagaaattt tatttaaact cataggaatt tatgcgattt tgaatgatac
     4981 tttaaatatt aaaaatgttt tagaattttc aagaaaaacc aatggttgta ctctcaaaac
     5041 ttgcgtcttg cttgctaaaa tttattttga tgaaaaaaat atcgaagctt taaaaagtat
     5101 atataaagag ctttatcaac ttaccaaaaa taaaagtttt gtattggctt tagttgagct
     5161 tttaaattct caaggcaaaa cagaagaagc tttaaaaatt tctttgcagt atgatttaga
     5221 tgatgacatt aaactcgctt tgtatcagaa tttaaaacgc tttgatgatg ctaaaaaaat
     5281 gagtttagct ctttatcata aaacaaaaaa taaagaatat cttctacgag cggcagtttt
     5341 tgaatttgaa gctgcaaatg aagctaaaaa aatcactcca aaagtaattg attctgtaaa
     5401 agaaaaattc gaacaggcta tcgataaaga tagcaatgct ttgtatttaa actactatgg
     5461 atatttgctt atagattatg atttagatgt taaaaaaggt atagagcttg tgaaacttgc
     5521 cttagaaaaa gatccacaga atttgtatta tttagattct ttagcttggg ggtattataa
     5581 actaggcgat tgtaagcaag catgggaaat tttaaaacaa acattagatg ataaagaatt
     5641 tgcaaattct gatgagagca aagctcatat aaaagcgata aaggcgtgta taaaaccatg
     5701 atattggata aaatttttga aaaaacaaaa gaagatttaa aagaacgcaa actaaaactt
     5761 ccttatgata tgttagggcg ttctttagct tcaaatcctt tctttccaaa agatgtgatt
     5821 aaggctttaa aaagagtaga aaaagaagtt aaaatcatag cagaagtaaa aaaagcaagc
     5881 cctagcaagg gagtcattag agaagacttt gatcctttga gtatcgcttt aaattatgag
     5941 aagaacaaag ctgcggcgat ttctgtttta actgagccgc atttttttaa aggttcttta
     6001 gaatacttaa gtcttatacg ccgttatacg caaattcctt tacttagaaa agattttatc
     6061 tttgatgagt atcaaatttt agaagctttg gtttatgggg cggattttgt attattaatc
     6121 gctaaaatgc taagcatgaa agagcttaaa aaactgcttg agtttgcaag acatttaggt
     6181 cttgaggctt tggttgaaat ccatgataaa gaggatttga gtaaggctat ttttgctgga
     6241 gcggatatta tcggtatcaa tcatcgtaat ttagaggatt ttactatgga tatgagtttg
     6301 tgcgaaaaac ttatcccaca aatcccaaat tcaaaaatca tcatcgcaga aagtggttta
     6361 gaaaataaag aatttttaga gcatttgcaa aatttaggcg ttgatgcttt tttaatcggc
     6421 gaatatttta tgcgcgaaaa agatgaagga aaggctttaa aagctttgct ttaaggaggg
     6481 aaaatgcagt atttgtatgc accatggcgg agtgagtatt ttgaaaaagt aaaaagcatt
     6541 tgtccatttt gtgattgtgc taataagatc aaaagcgatg aagaattagg cgtgattttt
     6601 agagcaaagc attgttttgg agtgatgaac cgctatcctt attctgcagg gcattttatg
     6661 gtgattcctt atatacatga agagcatata gaaaatttaa gtgatgaaat ttggcaagaa
     6721 atgagttatt ttgtgcgttt gggggtaaaa attttaaaag agcaaattca tgcaaatgga
     6781 gtgaatatcg gtatgaattt aagcaaggat gcaggagctg gcatagcttt tcattgtcat
     6841 tatcatctag tgccacgctg gtcaggagat acaaatttta tcacaaccat aggagaaact
     6901 agggtttgtg gcactaatat agagcaagtt tatcaaaaac ttgttttggc ttttaaaaat
     6961 gctcagtgaa gttgaatttg tagagtttca aaaagaaaat ttctctcttt taatcgatgc
     7021 aagaagccct agagaatttt tgcattctca cttgatagga gctttaaatt tttatgcact
     7081 caatgatgaa gaatatcaag aaataggaac aatttataag aaaaatcaag ctttagctaa
     7141 ggctatgggt gcgagttata tttgtcaaaa taccactaag catatattag aaatcactca
     7201 aaattttcgc ataggagaaa aggtggggat ttattgttct cgtgggggtt tgcgttcaaa
     7261 gtctatcgca gtgattttaa gtgagcttgg ctttagggtg gtgcgtttaa aaggtgggtt
     7321 taaagcttat agaacttttg taacgcatta tttcgaaaat gaaataaatt ttgatttttt
     7381 tgctctttgt ggtaatacag gttgtggaaa aacagagctt ttagaacaac tcccacaagc
     7441 tataaattta gaaaaaatgg caaatcattt aggctcgtct tttggtgata ttttaggaaa
     7501 acaacctacg caaaaagctt ttgaagcaga actttttcac aatattcaaa atttagaaaa
     7561 ttttgctttc atagaaagcg aaagtcgcaa aataggggat attatcttac cttttaaatt
     7621 ttatgaaaaa atgcaaaagg cttttaaaat ttattgtttt tgttctttgg aaaatcgcgt
     7681 tagaagaata caaaaaattt atcaagaaaa aatgactcct ttgaaatttc aacaatgtgt
     7741 gcaaaaaatc agtccttata tcagcttaaa tttacgccaa gatttgcttc aaagttatga
     7801 gagaaaagaa tggcaaaagc ttattgttat gcttttggag tattatgata aaacttataa
     7861 aaaaccagat aagattgatc ttgagttaaa tactgatgat attttaaaag ctaaagaaga
     7921 gcttttagat cattttaaag tacaattact tttttaatat cagataattt tattaaataa
     7981 tcaaattttt tcttcatcat cttgtaataa tcctttttat ctttgttgtt ttttaacttg
     8041 gctcaaattt ttattttaat gctagt
//
LOCUS       DAPIYB010000073         7997 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.074, whole genome shotgun sequence.
ACCESSION   DAPIYB010000073 DAPIYB010000000
VERSION     DAPIYB010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7997)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7997)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7997
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.074"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            32..169
                     /locus_tag="RJ318_001374"
     CDS             32..169
                     /locus_tag="RJ318_001374"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431228.1"
                     /translation="MKIYFSKFPFAKFDKSAKIYALELFWLKFTNNALGLSKKLEFYK
                     K"
     gene            241..1023
                     /gene="kpsM"
                     /locus_tag="RJ318_001375"
     CDS             241..1023
                     /gene="kpsM"
                     /locus_tag="RJ318_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide transporter KpsM"
                     /protein_id="HDV7431229.1"
                     /translation="MLNVIYALFFRELKTRFGKNRYLGYIWVVGEPMSIVLLVTIIGT
                     IVREYHHQVMPEGISIFMFLISGIMPFFMFRSIVTQLMNGTQANLALFAYKPVKPIHV
                     FIARTLLEFCIYFVIFIIILFFAGWFFRLDVFPVHLLGVLFCIFLLICSAFALGICFA
                     IIWHFVEPLRTLLAYFSIVFYWTSGIIFPTWLTPRPLLDIFYYNPLLHIFELLRFNFF
                     ENYPLQDEYSYFYAIFWILLVLFIGLFIYYYNRQALTAVKKE"
     gene            1020..1682
                     /locus_tag="RJ318_001376"
     CDS             1020..1682
                     /locus_tag="RJ318_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7431230.1"
                     /translation="MIKLINLTKSYPLFSGGRHYVFKNFTFEFPENCSIGLMGYNGAG
                     KSTLMRLLSGAELPDSGKIITNKKLSWPLGLNGAFQGSLTARDNAKFVARVYGYKGKE
                     LQEKVKFVEDFAELGKFFDEPMKTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPA
                     FREKSVKLYRERLSKSKVIMVSHNVAEIKEWCDKIIYMKNGQITVYDDVDEGIAVYQG
                     KV"
     gene            1682..2800
                     /locus_tag="RJ318_001377"
     CDS             1682..2800
                     /locus_tag="RJ318_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDV7431231.1"
                     /translation="MEENKTLLEKIKDLSIFDSFKIVWFIMIFVVIYYTLIAAPRYVS
                     TMILDVRSTSGESAQTSGILSLLSSTSTASEDLNYLKGYIESSDMLKILDEKIKLKNL
                     YQEQHIDLPFKIWDSSSIESYLKYYQARVKVHTDETTKLLKVEVEGFTPKSAHLIAQA
                     IMQESEKFINEISHKAAREQMAFAENEVQKYKERYQKAQNDLIAFQNKYGVFDPLKQA
                     ETKASLVAQIEANLAQKEAKLLTLQSYMNDAAPEVVALKAEIEAIKKQLLREKSKISA
                     NNSSQKLNDLAAKFQDLTIEATFAQKAYEAALKAYESARIEALRKIKQLVIIQSPDIP
                     ESAKYPERIYDILTAFIVLSLIFGIVKFIKMIIEEHKY"
     gene            2802..4460
                     /locus_tag="RJ318_001378"
     CDS             2802..4460
                     /locus_tag="RJ318_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HDV7431232.1"
                     /translation="MKKILILLFSCILCFGAVDVSQIISAEDQGSATTSIDQNLSSNY
                     DIANKENNLTKIHQILVFGAHLFNGNFKNYNQRVYNPDYKIAVGDQISLKIWGAVEFS
                     QVLVVDSQGNIFIPKVGAVNLLGVKNSALVSVIKARVNKIYKSNVFVYADMNAYQNVS
                     VFVTGNVNAPGLYQGLSSDSVIQYLDKAGGINLEYGSFRDIQILRNNSVIKNIDLYDF
                     LLKGQMDLFPFRSGDVILVGNVQNYAFVNGDVQRPFRFELSNDIKTLADLARVSGAKP
                     IVTNAIVKSYGEDHKLDVSAYNKMQFSKVLLRTGDEVEFHPEYVSENITISVNGEHNG
                     LKTLVVGKGTTLEDISKLIKANPQSNMQALQVFRKSVARTQKELINAQLKELETLALT
                     SGSVTAQGAAIRAQQAKTILEFIQRAKQVEPKGQIVIDNPKSYNSVILEDGDTINVPS
                     KNNLIIVQGEVSLPGAFVYDKGKDLRYYINLAGGYGERADTSKVLVIRSNGKAEKYHS
                     GIDMKRGDSVLVLPKVDSENLQIFSMLTQILYQIAIATNVVLNL"
     gene            4471..5418
                     /locus_tag="RJ318_001379"
     CDS             4471..5418
                     /locus_tag="RJ318_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HDV7431233.1"
                     /translation="MNTLEIAKEVFEKEAQAILDLATNLDENFNQAVNLMLNTKGRCI
                     VSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHGDLGMLTSEDVLIAISNSGETEE
                     ILKIIPAIKKREIPLIVMCGKKNSTLVKQGDIFLNIAVEKEACPLQLAPMSSTTATLV
                     MGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDL
                     VDVMTSGKLGLCVVLENEKLVGIITDGDLRRALKASDKPRFDFKAKEIMSINPKVVDA
                     DAMASEAEGIMLKHKIKEIIVGKEEKVVGIIQLYAIGNV"
     gene            5418..7052
                     /locus_tag="RJ318_001380"
     CDS             5418..7052
                     /locus_tag="RJ318_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDV7431234.1"
                     /translation="MPLLSVIIPFGLSKERPYIEERVLQKAKFFQSDENIEFIFVEGY
                     SSKDHELKNFIQANHHIYLKDMDQKAFSQGRCRNLGASYAHSNVLLFLDVDCYISLDN
                     FEKILKLIQIKNISQNINALIVLPVVYLNKEANEKLKQYDDKFWDILIQEDLFTAKNT
                     WVKFFAPSSTSSIVINKHQFLRLGGNDENFIGHGYEDFDLFARILKACVSFEKMPTNL
                     SYDARNWNFFNFKGFRSWFSLLGYEACFYGIYIYHFYHIEPNQNAYMQNKDKNHQLFY
                     KHLKNIKKHDLKPLQVFKAKGEKVLMLFKDQNYDFKDISVYVGEIIYKNISDFFIAKE
                     LKYELLLDFLQQEKITKIFLDASIKLQFNGIDYCDIFYFQKGILPHSWFFAKKLDLGY
                     KQDLNLSEQKLYQVKEYFLTLKEDEKKVILDFLSQNNDDKYDLYKMLYYLINELYSFE
                     HDGIFYQIIIDKEKMLIAQKHDKSFYPLRSFVYKPYLHELKSIRPFSFLMKILGLEYL
                     GAMISHTKFYRLARKLFFNPKGFFEDFNYKIMKGKI"
     gene            7049..>7997
                     /locus_tag="RJ318_001381"
     CDS             7049..>7997
                     /locus_tag="RJ318_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HDV7431235.1"
                     /translation="MKIVIVGIGYVGLANAILFSKNNENEVVLLDIDENKIQSINNHK
                     SPIKDKLIEKFFVQNISKLHATSNIKEAYFNADFAVIATPTDYDEQLNFFDTRSIENV
                     LKDIKNINSKINVIIKSTVPIGYTKTIKQKFNMSNIVFSPEFLREGSALYDSLYPSRI
                     IIGDKSVLGKTIGDLFLKNIEKKNVDIFYMDSDEAESVKLFSNTYLAMRVGFFNEVDS
                     YARKHNLNSADIIKGISADDRIGKYYNNPSFGYGGYCLPKDTKQLLANFYNIPNSLIK
                     AIVETNEIRKKFITQLILEKKPNILGIYRLIMKQNSDNFR"
BASE COUNT         2835 a          906 c         1432 g         2824 t
ORIGIN      
        1 ggccgagttt aaaatggcaa gcaaggagca aatgaaaatt tatttttcta agtttccctt
       61 tgctaaattt gataaaagtg caaaaattta tgctttagag cttttttggc ttaaatttac
      121 taacaatgct ttaggactta gtaaaaagct tgaattttat aaaaaataaa tttttatgat
      181 tttgtttaaa aaaatgagtt atgattatag tttatgtaaa attgttaggt ataaaaataa
      241 atgttaaatg taatttatgc tttatttttt agagagttaa aaactagatt tggtaaaaat
      301 cggtatttag gatatatatg ggtagttggg gagcctatga gtattgtact tttagtaact
      361 atcataggca ctattgttag agaatatcat catcaagtta tgcctgaggg aatttctatt
      421 tttatgtttt tgatttcagg cattatgcct ttttttatgt ttagaagtat agttacccag
      481 cttatgaatg gaactcaggc aaatttagct ctttttgcct ataaacctgt aaagcctata
      541 catgtattta ttgctagaac tttacttgag ttttgtattt attttgtaat ttttattatc
      601 atactttttt ttgcgggatg gttttttaga cttgatgtat ttcctgttca tttgcttgga
      661 gttttgtttt gtattttttt gcttatatgt tcagcttttg ctttgggaat ttgttttgct
      721 attatttggc attttgtgga acctttaaga actttgctag cttattttag catagtgttt
      781 tattggactt cgggaattat atttcctact tggctaactc ctcgtccttt gcttgatata
      841 ttttattata atcctttgct tcatattttt gaacttttaa gatttaattt ttttgaaaat
      901 tatcctttgc aagatgaata tagttatttt tatgctatat tttggatttt acttgtttta
      961 tttatagggc tttttatcta ttactataat agacaagctt taacggcggt aaaaaaagaa
     1021 tgataaagtt aattaatcta acaaaatctt atcctttatt tagtggtgga agacattatg
     1081 tttttaagaa ttttactttt gagtttcctg aaaattgtag cataggtttg atggggtata
     1141 atggagcggg taaatctact cttatgcgtc ttttaagcgg ggcagaactt cctgatagtg
     1201 gtaagataat tactaataaa aaattatctt ggccattggg tttaaatggg gcttttcaag
     1261 gttctttaac agctagagat aatgctaaat ttgtagctag agtatatggt tataaaggaa
     1321 aagaactcca agaaaaagta aaatttgtgg aagattttgc agaacttggg aaattttttg
     1381 atgagcctat gaagacttat tcttcgggaa tgagtgctag gatagctttt ggacttagta
     1441 tggcctttga ttttgattat tatttgattg atgaagcagg agctgttgga gatcctgctt
     1501 ttagggaaaa aagtgtgaaa ttatatagag aaagattaag caaatcaaaa gtgattatgg
     1561 tatctcataa tgtagctgaa attaaagaat ggtgtgataa aataatttat atgaaaaatg
     1621 gacaaattac ggtttatgat gatgtagatg aaggaatagc tgtatatcaa ggaaaagttt
     1681 aatggaagaa aataaaactt tattagaaaa aatcaaagat ttaagtatat ttgattcttt
     1741 taaaattgtt tggtttataa tgatttttgt tgtgatttat tatacattga ttgcagcacc
     1801 aagatatgta agcacgatga ttttagatgt tagatcaaca agtggagaaa gtgctcaaac
     1861 aagtggaatc ttgtctttgc ttagtagtac ttctacagca agcgaagatt taaattatct
     1921 aaaaggttat atagaatcaa gtgatatgtt aaagattttg gatgaaaaaa tcaaacttaa
     1981 aaatctttat caagagcaac atatagattt accttttaaa atttgggatt caagctcgat
     2041 agaatcttat cttaaatact accaagcaag agttaaggtt catacggatg aaaccactaa
     2101 acttttaaaa gttgaagtag agggttttac acctaaatca gctcatttga ttgctcaagc
     2161 tattatgcaa gaaagcgaaa aatttatcaa cgaaatctct cataaagcag ctagagagca
     2221 aatggctttt gctgaaaatg aagtgcaaaa atacaaagaa cgttatcaaa aagcacaaaa
     2281 tgatttgatt gcttttcaaa ataaatatgg agtttttgat cctttaaaac aagctgaaac
     2341 taaagcaagt ttagttgcgc aaattgaggc taatttagct caaaaagaag ctaaactttt
     2401 aactttacaa agctatatga atgatgcagc acctgaagta gtagcactta aagcagaaat
     2461 tgaagcgatt aaaaaacagc ttttaaggga aaaatctaaa atttcagcta acaattcttc
     2521 tcaaaagctt aacgatttgg ctgctaaatt tcaggattta actatagaag ctacttttgc
     2581 gcaaaaagct tatgaagcag ctttaaaagc ttatgaaagt gctagaatag aagcattaag
     2641 aaaaataaaa caacttgtca tcatccaaag tccagatatt ccagaaagcg caaaatatcc
     2701 tgaaagaatt tatgatattt taacagcatt tattgtatta tctttgattt ttgggattgt
     2761 taaatttatt aaaatgataa tagaggagca taagtattaa aatgaaaaaa atattaattt
     2821 tactttttag ttgtatttta tgttttggag ctgtggatgt ttcacaaatc atttcagcag
     2881 aggatcaagg ttctgctaca actagcatag atcaaaattt aagctcaaat tatgatatag
     2941 caaataaaga aaataatctt acaaaaattc atcaaatttt agtatttggc gctcatcttt
     3001 ttaatggaaa ttttaaaaat tacaatcaaa gagtttataa cccagattat aagattgcag
     3061 ttggtgatca aatcagtctt aaaatttggg gagctgttga gttttcgcaa gttttagtgg
     3121 tggattctca aggaaatatt tttatcccta aagtaggagc tgtaaattta ctaggtgtga
     3181 aaaatagcgc ccttgtaagt gttataaaag cacgtgttaa taaaatctat aaaagcaatg
     3241 tttttgttta tgcagatatg aatgcttatc aaaatgtcag tgtttttgta acaggaaacg
     3301 ttaatgctcc aggactttat caaggactta gttcggattc agtgatccag tatcttgata
     3361 aagcaggggg tataaattta gaatatggaa gttttagaga tattcaaatt ttgcgtaata
     3421 acagcgtgat aaaaaatatt gatttatatg attttttact aaaggggcaa atggatcttt
     3481 ttccttttag aagtggagat gttattttag taggaaatgt tcaaaattac gcttttgtta
     3541 acggtgatgt gcaaagacct tttcgttttg aactttcaaa tgatattaaa actttagctg
     3601 acttagctag agtatcaggt gctaaaccta tcgtaactaa tgctatcgta aaaagttatg
     3661 gtgaagatca taaacttgat gtcagtgctt ataataaaat gcaattttca aaagttttac
     3721 ttagaacggg agatgaggta gaatttcacc ctgagtatgt ttctgaaaat ataactataa
     3781 gtgtaaatgg cgagcataat ggtttaaaaa ctttagttgt gggtaaagga acgactttag
     3841 aagatatttc taaattaatt aaagctaatc cacaatcaaa catgcaagct ttacaagtgt
     3901 ttagaaaaag tgtagctaga actcaaaaag aacttatcaa tgctcagctt aaagagcttg
     3961 aaactctagc tttaactagt ggttctgtta cagctcaagg tgcagctata agagctcaac
     4021 aagcaaaaac gattttagaa tttatccaaa gagctaagca agtagagcct aagggtcaaa
     4081 ttgtcattga taatccaaag tcttataatt cggttatttt agaagatggt gatactatta
     4141 atgtaccaag taagaataat ctcatcatag ttcaaggtga ggtttcttta cctggagctt
     4201 ttgtgtatga taagggcaaa gatttaagat attatatcaa tcttgcagga ggttatggag
     4261 aaagagcgga tacttcaaaa gttttggtga tacgaagcaa tggaaaagct gaaaaatatc
     4321 atagtggtat agatatgaaa cgaggcgatt ctgtgttggt attgccaaaa gtggatagtg
     4381 agaatttaca aattttttca atgttgactc aaattcttta tcaaattgct atcgcaacca
     4441 atgttgtgct taatctttaa ggtttaaata atgaatactc ttgaaatagc caaagaagtt
     4501 tttgaaaaag aagcgcaagc tattttggat ttggctacaa atttagatga aaattttaat
     4561 caagctgtaa atttgatgtt aaataccaaa gggcgttgca tagttagtgg tatgggtaaa
     4621 tcaggtcata taggcgctaa gatagcagct actttagcaa gcacaggaac accaagcttt
     4681 tttatccatc caggagaggc tttgcatgga gatcttggaa tgttaacttc cgaagatgtt
     4741 ttaattgcta tttcaaattc aggagaaact gaagaaattt taaaaatcat tcctgctata
     4801 aaaaagcgcg aaattccact tatagtaatg tgtggtaaaa aaaattctac ccttgtaaag
     4861 caaggcgata tatttttaaa tatagccgtg gaaaaggaag cttgtccttt gcagcttgct
     4921 cctatgtctt cgacaacagc aactttagtt atgggggatg ctttagcggc tgctttgatg
     4981 aaggtaagaa atttcaagcc tgatgatttt gccctttttc atccaggggg aagtttggga
     5041 cgtaagcttt taaccaaggt aaaagatctt atggtttcaa gtaaccttcc tatagtgcat
     5101 cctgataccg aatttaacga tcttgttgat gtgatgacta gtggaaaact aggactttgt
     5161 gtggtgcttg aaaatgaaaa attagtgggt attatcactg acggggattt gcgtcgtgct
     5221 ttaaaagcaa gcgataaacc aaggtttgat tttaaggcca aagaaatcat gagtataaat
     5281 cctaaagtag tcgatgctga tgctatggca agtgaagcag aagggatcat gttaaaacat
     5341 aaaatcaaag aaattatagt aggaaaagaa gaaaaagttg taggtattat ccagctttat
     5401 gccataggaa atgtttaatg cctcttttat ctgttattat tccttttgga ttaagtaaag
     5461 aacgtcctta tatagaagaa agagttcttc aaaaagctaa attttttcaa agcgatgaga
     5521 atatagaatt tattttcgtt gaaggatatt catctaaaga tcacgagctt aaaaatttta
     5581 tccaagcaaa ccatcatatt tatcttaaag atatggatca aaaagctttt tctcaaggaa
     5641 gatgtaggaa tttaggagca agttatgcgc attcaaatgt tcttttgttt ttggatgtgg
     5701 attgttatat ttctttggat aattttgaaa aaattttaaa actaattcaa attaaaaata
     5761 tttctcaaaa tatcaatgct ttgatagttt tacccgtagt gtatcttaat aaagaagcta
     5821 atgaaaaatt aaagcaatac gatgataaat tttgggatat tttgatacaa gaggatttat
     5881 ttacagcaaa aaatacttgg gtaaaatttt ttgccccaag ttctacttca agtattgtga
     5941 taaataaaca tcagttttta agattgggcg gaaatgatga aaattttatc ggacatggtt
     6001 atgaagattt tgatcttttt gctagaattt taaaagcttg tgtgagtttt gaaaaaatgc
     6061 ctactaattt aagttatgat gctagaaatt ggaatttttt taactttaaa ggttttagat
     6121 cttggttttc attgcttggt tatgaggctt gtttttatgg aatttatata tatcattttt
     6181 atcatataga acccaatcaa aacgcttata tgcaaaataa agataagaac catcagcttt
     6241 tttataagca tttaaaaaac atcaaaaaac acgatttaaa gcctttgcaa gtttttaaag
     6301 ccaaaggtga aaaagtttta atgcttttta aagatcaaaa ttatgatttt aaggatatta
     6361 gtgtttatgt gggagaaatt atctataaaa atataagtga tttttttata gctaaagagt
     6421 taaaatatga acttttgttg gattttttac aacaagaaaa aatcactaaa atatttttgg
     6481 atgcaagtat aaaactacaa tttaatggta tagattattg tgatattttt tattttcaaa
     6541 aaggaatttt acctcattct tggttttttg caaaaaaatt agatttaggt tataaacaag
     6601 atttaaattt aagcgagcaa aaactttatc aagtgaaaga atatttctta actttaaagg
     6661 aggatgaaaa aaaagttatc ttggattttt taagccaaaa caatgatgat aagtatgatt
     6721 tgtataaaat gctttattat ttgattaacg agctttatag ttttgagcat gatgggattt
     6781 tttatcaaat catcattgat aaagaaaaaa tgctgatagc acaaaaacat gataaaagct
     6841 tttatccttt aagatctttt gtttataaac cttatttgca tgagcttaag agtataagac
     6901 ctttttcatt tttgatgaaa attttaggtt tagagtatct tggtgctatg atttcacata
     6961 ctaaatttta tcgcttggca agaaaattgt tttttaatcc taagggattt tttgaggatt
     7021 ttaattataa aataatgaaa ggtaaaatat gaaaatagtc attgttggaa ttggttatgt
     7081 tgggcttgca aatgctatac tcttttcaaa aaataatgaa aatgaggttg tattgttaga
     7141 tattgatgaa aataaaatcc aaagtattaa taatcataag tctcctatta aagataaatt
     7201 aattgaaaag ttctttgtgc aaaatataag taaattacat gctacttcaa atatcaaaga
     7261 ggcttatttt aatgcagatt ttgcagttat tgctactcca actgattatg atgaacagct
     7321 taattttttt gatacaagaa gtatagagaa tgttttaaaa gatataaaaa atataaattc
     7381 taagatcaat gttattatta aaagcactgt gcctatagga tatacaaaaa ccataaaaca
     7441 aaaatttaat atgtctaata ttgttttttc tccagaattt ttacgggagg gaagtgcttt
     7501 atatgatagt ctatatccca gtagaattat tattggtgat aaaagtgttt tgggtaaaac
     7561 tattggagat ttgtttttaa aaaatataga gaaaaaaaat gttgatattt tttatatgga
     7621 ttcggatgag gcagaaagcg ttaagctttt ttctaatact tacttagcaa tgagagtggg
     7681 attttttaat gaagttgatt cgtatgcaag aaaacataat ttaaattcag cggatataat
     7741 taagggtatt agtgctgatg atagaattgg aaaatattac aataacccta gttttggata
     7801 tggtggatat tgtttaccta aagatacaaa acagttgctt gcaaattttt ataatattcc
     7861 taatagttta attaaagcta tagttgaaac taatgagata agaaaaaaat ttataaccca
     7921 gcttatttta gaaaaaaaac caaacatttt aggtatttat agattaatta tgaagcaaaa
     7981 ttctgataat tttagaa
//
LOCUS       DAPIYB010000074         7915 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.075, whole genome shotgun sequence.
ACCESSION   DAPIYB010000074 DAPIYB010000000
VERSION     DAPIYB010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7915)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7915)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7915
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.075"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            81..3593
                     /locus_tag="RJ318_001382"
     CDS             81..3593
                     /locus_tag="RJ318_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[ACP]--phospholipid O-acyltransferase"
                     /protein_id="HDV7431236.1"
                     /translation="MQKKSFLKIYGLIPFLLIAFINAFVDLGHKIIIQNTIYKAYEGS
                     EQLFLNAIVNALILLPFILMLSPSGFLADKYPKNIVMKISAIFNVILTLIICICYYSG
                     AFWMAFIFTFIMGAQAAIYSPSKYGFIKELVGKDFLAMGNGVINAVSIVAILAGMALF
                     SLSFESLYSSMYNQTDEILKEVAPLGIVLILFSCIEVFFAWRLPKLKQTNKDLVFNKK
                     DYIRGKLLINNLKLVFKNKTIWLCIIGISFFWAISQLYLVSFPVFAKNELFIENTFYV
                     QISLAFSGIGVILGSLVAGKFSKNYIELGFIPLGALGMFLMAFLMPYFISLLSYSFLF
                     FFFGFCGALFIIPLNTLIQFHAKENELGQILAGNNFFQNIAMLGFLLLATLFVKFEIN
                     VIYLFYFIALVTFIGSFYILLKLPFSLVRILLSIAFLQRYRLLVEGFENIPEKGGALL
                     LGNHISFIDWAVVQMAIPRKIYFVMERSIYSKWYIKIFLDKFGIIPVSSTGSKTSLEL
                     IAKHIKEGNLVCLFPEGTLSRHGQLNEFKAGFELACECLSEDDGKIIPFYIRGLWGSA
                     FSRSDEEFSARNRTLNKRKIAIAFGKAMPLHSKKDEVKAKVFELSFMAWKSQCEAMHT
                     IARAWIDTAKKNLNQIAIIDTLAGDISYRKMLTLSLFLNFFIKRKSKELNINLQRGSY
                     APKEEAIGILLPASFASSLTNLSVLIAEKIAVNLNFTAGEKALKAAIKNTQISQIYTS
                     KTFLEKLANKGINLNFDTNIHLIYFEDIVEDFKMQKTKIFSMMLAVSIIPSFILKSIF
                     TPSKNNLAIAAILFSSGSEGSPKGVMLNNRNILSNIAQISDVLCTRNNDVILSSLPPF
                     HAFGLTVTTFLPLLEGIKSITFSDPTDALGVAKAVAKNNVTIMCGTSTFLGIYARNKK
                     LDALMFESLRIVVSGAEKLKNEVRTTFEMKFKKSIFEGYGATETTPVASVNLPNHFDV
                     DYWLIHRANKEGSVGMPLPGTAVRIVDPNNYENLKTNEDGLILIGGHQVMVGYLNDKE
                     KTDEVVKEIDGIRWYNTGDKGHLDEDGFLYIVDRYSRFAKIGGEMISLGAIEEEIAKF
                     IDTEVVKFCATSLEDEKKGEQIVLLIECNNEIFEGVCEAIKNSNIPTLFKPRYYFQIE
                     KIPLLGSGKVDLKKVKELAKNLAI"
     gene            complement(3601..4512)
                     /locus_tag="RJ318_001383"
     CDS             complement(3601..4512)
                     /locus_tag="RJ318_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDV7431237.1"
                     /translation="MFVFIPLFTIFILLAGGYFAKRIGVLKQKQARTFLDFAIIFALP
                     CLIFDKAYHLNFDFSLIIFIFIGLFSCILAAFFAILIGKVFHFSKVTLVSMFLLSCFG
                     NTIFVGMPIVAGVFNDPQFSAEVIFYDALATTLPISLFGPFILSLGNGEKVSLLANVK
                     KILSFPPFLALLFGFLCKLITLPEFIFSPIRLFGASATPVALFAIGLGLGFMAIKTSY
                     KPTVIVIFAKMILAPLFFVFCLKIFNLELKDSTIVAIIESAAPTMTLAGAMVMKAKLD
                     SNLAVSAVAFGVLFAFVSMPILIWTLL"
     gene            complement(4709..4794)
                     /locus_tag="RJ318_001384"
     tRNA            complement(4709..4794)
                     /locus_tag="RJ318_001384"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4758..4760),aa:Leu,seq:gag)
     gene            complement(4829..5167)
                     /locus_tag="RJ318_001385"
     CDS             complement(4829..5167)
                     /locus_tag="RJ318_001385"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDV7431238.1"
                     /translation="MKKVLFLLLACTAVAFAAETNAPVEQEAINVWIKAFSVLAAGLG
                     LGVAALGGAIGMGNTAAATIAGTARNPGLGPKLMTTMFIALAMIEAQVIYALVIALIA
                     LYANPFIVLQ"
     gene            5400..6734
                     /locus_tag="RJ318_001386"
     CDS             5400..6734
                     /locus_tag="RJ318_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDV7431239.1"
                     /translation="MSSKFSKIGFILAVAGSAVGLGNAWKFPTLVGQSGGSAFILLYI
                     ILTLGVGFVIFLAELSIGKISEKDPVNAYEKLAPSNKKAWSYVGFTMVGAILIVSFYT
                     LVIGWIVKYVFLSITGNLPMDLEVSKAQFGFFISEDFLSQFICFTLVFLCVFYIVSKG
                     VKNGIEKLNVWMMPSLFILLILMLVYAISKDGFIMAVKFLFVPDFSKINTSNVLEALG
                     LAFFSLSLGVGTIITYSASLPDKTNFITSTLNIIFINLLVGLLMGLVVFTFIFEFGYN
                     PNQQGPGLVFISLATLFEKIGVIGCIFGAAFFISLIFAGITSAVSMIEPFTFYLINTF
                     GMSRKKALILIGIVVYILGMLCILSSLKSTQFGFFGMSFFDLLDSVSSKVIMPLGGIL
                     AAIFVGFVMKKEALKILFKPYMRGIFFELWYVFLRFISPLAVVIVMIAAFLK"
     gene            6747..>7915
                     /locus_tag="RJ318_001387"
     CDS             6747..>7915
                     /locus_tag="RJ318_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDV7431240.1"
                     /translation="MRTYFSKIGFVLTVAGGAVGLGNAWKFPTLSAENGGFVFVLLYL
                     FFTLTIGFSIFLAEVAMGRLSKSDLANAYSNLAIKYGNRWRYGGVFMLGGIFVLSFYL
                     VIMGWVLKYTVVSLYYLPKTLDEAASNFQNLITTNLTSSVFFFTLSFFLTLLIVSKGL
                     IKGIEKLNVVIMPSLFLMLVFMLFYCMGFKQGFANAFSYLFYPDFLHFKFSSIAEALG
                     LAFFTLCLGIGCIVTYSSALDKKTNFIKSSVYIVLINLLISFIMGLIVFTFIFEFGAD
                     PHTQGVGIVFISLMSLFNQLGALGYIFAFCFFLALFFAGITSAVSMIEPLTFYMINNY
                     QISRVKALFLIGLFVFVFGICCILSLNLNFFSMFSFFGKDFFTLLDKLTSNFLLPL"
BASE COUNT         2565 a         1028 c         1332 g         2990 t
ORIGIN      
        1 ttaaaagata atatagataa ttttcctaaa aactgataaa ttcttttgta aaataagcgc
       61 taattgacga ggtttaaata atgcaaaaaa aatctttttt gaaaatttac ggattaattc
      121 cttttttact tatagcattc atcaatgctt ttgtggattt gggacataaa attattattc
      181 aaaatactat ttataaggcc tatgaaggaa gtgagcagtt atttttaaat gctatagtta
      241 atgctttgat tttacttcct tttattctta tgctttctcc ttcgggtttt ttagcggata
      301 aatatccaaa aaatattgta atgaaaattt cagcaatttt caatgttata ctcactttaa
      361 taatttgcat ttgttactat agcggtgctt tttggatggc ttttattttt acttttataa
      421 tgggagcaca agcagcgatt tattcaccaa gtaaatacgg ttttattaaa gaactcgtgg
      481 gaaaagactt tcttgctatg ggtaatggtg taattaatgc ggtaagcatt gtggcaatct
      541 tagcgggaat ggctttattt tctttaagct ttgaaagtct ttatagttct atgtataatc
      601 aaacagatga aattttaaaa gaagtagcgc ctttaggaat tgtgctaatt ttattttctt
      661 gtatcgaagt attttttgcg tggcgtttac ctaagctcaa acaaacaaat aaagatttag
      721 tttttaataa aaaagactat attcgtggaa aacttctaat aaataatctt aagcttgttt
      781 ttaaaaataa aactatttgg ctttgtataa ttggaatttc atttttttgg gctatatctc
      841 aactttatct tgtcagcttt cctgtctttg ctaaaaatga acttttcata gaaaatactt
      901 tttatgtgca aatttcactc gctttttctg gtataggagt gattttaggc tctttagtag
      961 ctggtaaatt ttcaaaaaat tatatagaac ttggatttat tccacttggt gcattgggta
     1021 tgtttttaat ggctttttta atgccttatt ttataagttt attaagttat agttttttat
     1081 ttttcttttt tggattttgc ggagcccttt ttatcattcc tttaaatact ttaatccaat
     1141 ttcatgctaa agaaaatgaa ttaggacaaa ttcttgcagg aaataatttt tttcaaaata
     1201 ttgccatgtt gggatttttg ctcttggcaa ctttatttgt aaaatttgaa atcaatgtga
     1261 tttatttgtt ttattttatt gctttggtaa cctttatagg aagtttttac atacttttaa
     1321 aactcccctt ttctttagtg cgtatacttt taagcatagc ttttttacaa cgataccgtt
     1381 tacttgtgga aggttttgaa aatataccag aaaaaggtgg agctttactt ttgggtaatc
     1441 atatttcttt tattgattgg gctgttgtac aaatggcaat tccaagaaaa atttattttg
     1501 ttatggaaag aagtatttat tctaaatggt atattaaaat ttttcttgat aaatttggta
     1561 ttattcctgt atcaagtaca ggaagtaaga cgagtttaga actgatagca aagcatatta
     1621 aagaaggtaa tttagtttgc ttatttcctg aaggtacact ttcgcggcat gggcaattaa
     1681 atgaatttaa agcaggattt gaattagctt gtgaatgttt aagtgaagat gatggaaaaa
     1741 ttattccttt ttatataaga gggctttggg gtagcgcttt ttcaagaagt gatgaagaat
     1801 tttcagcaag aaaccgcact ttaaataaaa gaaaaattgc tatagctttt ggtaaagcta
     1861 tgcctttgca ttctaaaaaa gatgaagtta aagctaaagt ttttgaactt tcttttatgg
     1921 cttggaaatc acaatgcgaa gctatgcata ctatagcaag agcttggata gatacagcta
     1981 aaaaaaatct aaatcaaata gctattatcg atacactagc tggagatatt tcttatagaa
     2041 aaatgttgac tcttagttta tttcttaatt tttttattaa aagaaaatcc aaagagttaa
     2101 acattaacct tcagcgtgga agttacgctc ctaaagagga agctatagga attttactac
     2161 ctgcttcttt tgcaagttct ttaaccaatc tatctgtttt aatcgcagaa aaaattgcag
     2221 taaatcttaa tttcactgct ggagaaaaag ctctaaaagc agctataaaa aatacgcaaa
     2281 tttcacaaat ttatacttct aaaacttttt tagaaaaatt agcaaataaa ggtataaacc
     2341 taaatttcga tacaaatata catttaattt attttgaaga tattgtagaa gattttaaaa
     2401 tgcaaaaaac taaaattttt agcatgatgc tagcagttag tattatacct agttttatac
     2461 tcaaaagcat cttcactcct tcaaaaaaca atcttgccat cgcagctatt ttatttagta
     2521 gtggaagtga aggttctcca aaaggtgtta tgctcaataa ccgtaatatt ttaagcaata
     2581 tagcacaaat ttctgatgtg ctttgcacaa gaaataatga tgtcattctc tcatctttac
     2641 caccttttca tgcttttgga cttaccgtaa ctacattttt gcctttgctt gaaggtatta
     2701 aaagcatcac tttttcagat ccaaccgatg ccttaggggt tgccaaagct gttgctaaaa
     2761 ataatgtcac tattatgtgt ggaacttcaa cctttttagg aatttatgca agaaataaaa
     2821 agcttgatgc tttaatgttt gaaagtttaa gaatagttgt atcgggcgct gaaaaactaa
     2881 aaaatgaagt aagaactact tttgaaatga agtttaaaaa aagcattttt gaaggttatg
     2941 gggctacgga aaccacgcct gtggcgagtg taaatttacc aaatcatttt gatgtggatt
     3001 attggcttat acatcgtgct aataaagaag gaagcgtagg aatgcctcta cctggaactg
     3061 cggtacgtat tgttgatcca aataattatg aaaatttaaa aacaaatgaa gatggactca
     3121 tacttatagg cggtcatcaa gttatggtag gctatcttaa tgacaaagaa aaaaccgatg
     3181 aagtggttaa agaaattgat ggcataagat ggtacaacac gggagataag ggacatttgg
     3241 atgaagatgg ttttttatat attgtcgatc gttattctcg ctttgcaaaa attggcggag
     3301 agatgatttc tttgggtgca atagaagaag aaattgccaa atttatagac actgaagtgg
     3361 ttaaattttg tgccacatct ttagaagatg agaaaaaagg ggaacaaatt gttttactca
     3421 tagaatgcaa taatgaaatt tttgaaggag tatgtgaggc tataaaaaat tctaatatac
     3481 ctacactttt taaacctaga tattattttc aaatagaaaa aattcccctc ctaggttcag
     3541 gaaaagttga tcttaaaaaa gttaaagaat tagctaaaaa tttagccata taatttgagc
     3601 ttataacaaa gtccaaatta aaattggcat agaaacaaaa gcaaaaagaa ctccaaaggc
     3661 tacagcactt acggctaaat tgctatctag tttagctttc attaccatag ctcctgctaa
     3721 ggtcatagta ggagctgcgc tttctataat agcaacgata gtagaatctt ttaattccaa
     3781 attaaatatt ttcaaacaaa atacaaaaaa taaaggagct aaaatcattt tagcaaagat
     3841 gacaattact gtaggtttgt aagaggtttt aatcgccata aagccaagtc ctaaacctat
     3901 ggcaaaaagt gcaacagggg ttgcagaagc gccaaataaa cgaataggag agaaaataaa
     3961 ttcaggtaaa gtaattaatt tgcacaaaaa accaaaaagc aaagctaaaa aaggtggaaa
     4021 actaagaatt tttttaacat tagcaagtaa actgactttt tctccatttc ccaaagaaag
     4081 tataaaaggt ccaaaaagtg atataggtaa agttgtggct aaagcatcgt aaaatataac
     4141 ttcagcgcta aattgtgggt cattaaatac accagcaaca ataggcatac ccacaaatat
     4201 agtatttcca aaacaagaaa gcaaaaacat actgactaaa gttactttag aaaaatgaaa
     4261 aacttttcca ataagaatag caaaaaaagc tgctagtata cagctaaaca atccaataaa
     4321 aataaaaata atcaatgaaa aatcaaaatt taaatgatat gctttatcga aaatcaaaca
     4381 aggtaaagca aaaataatag caaaatctaa aaaagtccta gcttgttttt gctttaaaac
     4441 gccaattctt ttggcaaaat atccgcctgc aagtaaaata aaaattgtaa ataatggtat
     4501 aaaaacaaac attgaataat cctttttaag ggatggtttt tgaaaacgga tagaattata
     4561 ttctttatac ttaaaaaaaa tcttaatatt ttttaagttt tttaaaaaaa ccaatatttt
     4621 ttattttttg taactttaag aaattgtaag ttgaaatttg attttgaata gttagtattt
     4681 taagttgaat gattataatt ttaaataatg gtgcggttag cgagatttga actcgcacac
     4741 gcggagcgca ccaccccctc aagatggcgt gtctaccaat tccaccataa ccgcatagaa
     4801 aaaagcccaa aaagggcttt gataagtttt attgtaaaac tataaaagga tttgcgtaaa
     4861 gtgctattag cgcgataaca agagcataga taacttgtgc ttcaatcatc gctaaagcga
     4921 taaacatagt tgtcattaat tttggcccaa gaccagggtt tctagctgtt cctgcaattg
     4981 ttgccgctgc agtattaccc ataccgatag caccaccaag tgctgcaaca ccaagaccta
     5041 agcctgctgc aagaactgaa aatgctttaa tccatacatt aatagcttct tgctctactg
     5101 gagcattagt ttcagctgca aaagctactg ctgtacatgc taataataaa aaaagaactt
     5161 ttttcattat cttaaccttt ctataaaaaa atttttttca atttttaaat cagttcggct
     5221 tgcgtatccc tacttaagac ttaaaaataa attcgaatta taaccaaaag tatctttatt
     5281 tttattgaaa tttacaaaaa ttcacatttt tgatttaaat ttgattgttt tcaataaagc
     5341 ttaaaagttt ttttgcttta ataatatttt aaaataattt ttaagtcaag gttgtaacat
     5401 tgagttctaa attttcaaaa ataggtttca ttttagcggt agcaggttca gcggtgggct
     5461 tgggtaatgc ttggaaattt ccaacactag taggtcaaag tggtggatct gcttttatct
     5521 tgctttatat aattcttact ttaggtgtag gttttgtgat atttttagct gagcttagca
     5581 taggaaaaat tagtgaaaaa gatccggtta atgcctatga aaagttagca ccttcaaata
     5641 aaaaagcttg gtcttatgtt ggttttacta tggtgggggc gattttaata gtttcttttt
     5701 ataccttggt gattggctgg atagttaaat atgtgttttt aagtatcact ggaaatttgc
     5761 ctatggatct agaagtaagt aaagcacagt ttggattttt tataagtgag gattttttaa
     5821 gtcagtttat ttgttttact ttggtttttt tatgtgtttt ttatattgtt tctaaaggtg
     5881 ttaagaatgg gattgaaaag ttaaatgttt ggatgatgcc ttcattgttt attttgctta
     5941 ttttgatgct tgtttatgct attagcaaag atggttttat aatggcggtt aaatttcttt
     6001 ttgtacctga tttttccaaa atcaacactt caaatgttct tgaagcctta ggacttgctt
     6061 tttttagtct ttctttgggc gttggaacga ttattactta ttctgctagt ctgcctgata
     6121 aaaccaattt tattaccagt actttaaata ttatttttat caatctttta gttggtttat
     6181 taatgggttt ggttgttttt acttttatct ttgagtttgg ttacaatcct aatcagcaag
     6241 gaccaggact tgtttttatt tccttagcta ctttatttga aaaaattgga gtgattggtt
     6301 gtatttttgg agcagcgttt tttatttctt taatctttgc tggtattact tcagctgttt
     6361 caatgataga gcctttcact ttttacctta ttaatacttt tggtatgagc cgtaaaaaag
     6421 ctttgatttt aataggaatt gttgtttata ttttaggaat gttgtgtatt ttatcttctt
     6481 taaaaagtac tcagtttgga ttttttggaa tgagtttttt tgatttgctt gatagtgttt
     6541 caagcaaggt tattatgcct ttaggtggaa ttttggcagc tatttttgtg ggatttgtga
     6601 tgaaaaaaga agctttaaaa attttattta aaccttatat gaggggtata ttttttgaac
     6661 tttggtatgt gtttttgaga tttatttccc ctttggctgt tgttatagtt atgatagccg
     6721 cttttttaaa gtgagtttga aaaataatga gaacatattt ttcaaaaatc ggttttgtat
     6781 tgactgttgc tggtggagcc gttggtttag gtaatgcttg gaaatttcca actttaagcg
     6841 cagaaaatgg tggttttgtt tttgtgcttt tatatttgtt ttttacttta actataggat
     6901 ttagtatttt tttggctgaa gtggctatgg gacgtttaag taaaagtgat cttgcaaatg
     6961 cttattcaaa tcttgccata aaatatggca atagatggcg atatggcggc gtttttatgt
     7021 taggtggtat ttttgtcctc tctttttatc tagttatcat gggatgggtt ttaaaatata
     7081 ctgtagtgag tctttattat cttcctaaaa ctttagatga agcagcaagt aattttcaga
     7141 atttaattac tacaaatttg acaagttctg tttttttctt cactttatct ttttttctta
     7201 ctttattgat agtatctaaa ggtttaatca aagggattga aaaattaaac gttgttataa
     7261 tgcctagctt atttttaatg cttgttttta tgttgtttta ttgcatggga tttaagcaag
     7321 gttttgcaaa tgctttttct tatttatttt atcccgattt tttacatttt aaattcagct
     7381 ctattgccga agctttaggg cttgcatttt ttaccttatg cttgggaata ggttgtatag
     7441 ttacatattc atcggccttg gataaaaaaa caaattttat aaaaagttca gtgtatattg
     7501 ttttgattaa tttattgatt tcttttatca tgggacttat tgtttttact tttatctttg
     7561 aatttggagc cgatccgcat actcaaggag taggaattgt ttttatatcc ttgatgagtt
     7621 tgtttaatca acttggagct ttaggctata tttttgcatt ttgttttttc ttagcacttt
     7681 tttttgctgg tattacttca gctgtttcaa tgatagagcc tttaactttt tatatgatta
     7741 ataactatca aatttctcgt gttaaagctc tatttttaat aggtttattt gtttttgttt
     7801 ttggaatttg ttgtatcttg tcattaaatt taaatttttt ttctatgttt agtttttttg
     7861 gtaaagattt ttttacttta ttagataaat taacttcaaa ttttttactt ccact
//
LOCUS       DAPIYB010000075         7874 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.076, whole genome shotgun sequence.
ACCESSION   DAPIYB010000075 DAPIYB010000000
VERSION     DAPIYB010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7874)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7874)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7874
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.076"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            135..1430
                     /locus_tag="RJ318_001388"
     CDS             135..1430
                     /locus_tag="RJ318_001388"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDV7431241.1"
                     /translation="MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKA
                     RNIAGKEEEIKEILNLFSISWQHYYIQSENLKFHRQMALKLVSEKKAFACFCTEEELE
                     AKKELAKKQGKAYRYDGTCEKLADIDVLECEKPFVIRLKKPTHTMKFTDFIKGELSFE
                     PENIDSFVIMRTDKTPTYNFACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLGYNK
                     AMTYAHLPIILNEEGVKMSKREAHSSVKWLLESGILPSAIANYLVILGNKTPCEIFTL
                     EEAIKWFDISKVSKAPARFDLKKLLQINREHIKMIKDDELNKILDLNKDLAQLAKFYT
                     QETSTIKELKEKMQAIFNAKDFGEFETECKILKELLKDIELFENYEDFKNELLNKSNL
                     KGKKFFMPLRIILTGNIHGPELSDLYPYIKNFIHELARI"
     gene            1433..1714
                     /locus_tag="RJ318_001389"
     CDS             1433..1714
                     /locus_tag="RJ318_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDV7431242.1"
                     /translation="MVIDSFIISIFQVLQIVINIYTWIIIITALLSWVNPDPYNPIVQ
                     ILYKLSYPAYALVRKIPTRIGNIDLAPLIIVLALQFLGIFLGNILRSIL"
     gene            1711..3336
                     /locus_tag="RJ318_001390"
     CDS             1711..3336
                     /locus_tag="RJ318_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HDV7431243.1"
                     /translation="MIKKILVFLFIFSSLNATQYSIEKLKKEENSLAKDYYIYRLLEK
                     NKISKKDAQDLNSHIFRYIGKIKSELEKIIPLKPYINPKYAKCYTYIANTILDANLTC
                     QSVRLNSLVFIASLNSKDRTTLAQTFKNQRPDLTNLLLAFNTSDPMSYIVQKEDINGF
                     FKLYNYSKKYDLDLNTSLVNKLPNHIGFKDFAQNIIIKKENPKFRYSMLEINPENVSE
                     DSAFYLGVNALTYDKTELAYDFFKKAAQSFKSQSNKDNAIFWMWLIKNNEEDLKTLSQ
                     SSSLNIYSLYAKELTNTPFPKIESLNPSKKKNNFNMQDPFAWQKINKQIRDANASQLD
                     VLAKEFDTQETLPIYAYILERKNNFKKHYFIMPYYDNIKDYNKTRQALILAIARQESR
                     FIPTAISVSYALGMMQFMPFLANHIGEKELKIPNFDQDFMFKPEIAYYFGNYHLNYLE
                     SRLKSPLFVAYAYNGGIGFTNRMLARNDMFKTGKFEPFLSMELVPYQESRIYGKKVLA
                     NYIVYRHLLNDSIKISDIFENLIQNKANDLNKS"
     gene            complement(3233..3718)
                     /locus_tag="RJ318_001391"
     CDS             complement(3233..3718)
                     /locus_tag="RJ318_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431244.1"
                     /translation="MKIYSVILGAFLLGACSLKDQAIVDTNLKSQTLMFTQKYKITQD
                     KINAIITMSYLNPILDKTSKDDVLALSFTPNTLKIQNLEVFINNKKANIEKLDDEYLK
                     YIIQNNYTDYFKVSLPSVKEEIRLVAKICLDHLPCFELNFQKYPKSLYYRSEDVDTQY
                     N"
     gene            3814..4305
                     /gene="mobB"
                     /locus_tag="RJ318_001392"
     CDS             3814..4305
                     /gene="mobB"
                     /locus_tag="RJ318_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HDV7431245.1"
                     /translation="MKQLIIAFSGPSNSGKTTLITKIADNFLQQNLKVLIIKHDPADK
                     AQFDFNGKDSFKFFQSGAEVMVLSPTRTTFFSHENRDILKALKLSPDFDICLVEGLKT
                     LDLPRISVFCKEIDESYFIFSNAIASYEKISHPYLTWLDLNDIQAICQYILKNAKNLQ
                     GEL"
     gene            4307..5149
                     /locus_tag="RJ318_001393"
     CDS             4307..5149
                     /locus_tag="RJ318_001393"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDV7431246.1"
                     /translation="MQEVISYIQKAVLEISNALKFPDTSYSQNQNFTGDTQLKFDVLS
                     DEIITKTLSQCSSIKAIISEEKDEILTLNERANFIVAYDPLDGSSLMDVNFAIGSIFA
                     IYEEKASAKNLRAALYSMYGARLELVICKDQPKLYRLNANNEFIFIKDLRMNEKGKIN
                     ATGGTQKFWEEKHAKFIKSLFDEGYRLRYSGAMVSDINQILLKRGGIFSYPATQDAPN
                     GKLRAFFEVFPLAFIIEKAGGKTTNGKNRSLLELEFDKIHATTPCFFGSEYEISKLLK
                     AYNE"
     gene            5142..5339
                     /locus_tag="RJ318_001394"
     CDS             5142..5339
                     /locus_tag="RJ318_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431247.1"
                     /translation="MNEVRDEFEQDMDKKKEILLSCQNSKNLNSCYNCDEIFNCQTRK
                     NYVDAVYNSMSKGKTEGGFDF"
     gene            5349..7235
                     /gene="metG"
                     /locus_tag="RJ318_001395"
     CDS             5349..7235
                     /gene="metG"
                     /locus_tag="RJ318_001395"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDV7431248.1"
                     /translation="MRYITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLT
                     GTDEHGQKIEEAAKLRNSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFIK
                     AMFLKMWQKGDIYKDEYEGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFK
                     LSKYQDKILQWYEEKDPILPKNKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDD
                     KHIIYVWLDALFIYVSSLDFQNKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDL
                     PLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFS
                     ENMLINRINAELSNEFGNLLNRIIGMSTKYSQGNISKEGVLKFYNAELNQAKEHLNLA
                     VEFLENLQCNRYLEELFKALSVANLAISKYEPWSLIKENKHEQANALVALCANILAKT
                     SLLLSPTLPKSSQKVALALNFEISSANYTKMILDNELLDFKANPCEALFPKVEKALLK
                     QEIKEEPKKEESPKIKIDDFAKIEIKVAKVLDCQNIEGSEKLLKFQLELDDKEIRQVL
                     SGIAKYYKASDLIGKQVCVISNLKKAKIFGHESDGMILSAKSGDKLVLIAPEQLVQNG
                     SLVG"
     gene            7239..>7874
                     /locus_tag="RJ318_001396"
     CDS             7239..>7874
                     /locus_tag="RJ318_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431249.1"
                     /translation="MQISNLGELLNATLIHEGSVLSVEGFAINLNELKTGFAFFNNDK
                     KEIAQAVKKGAYAIITENDITIEDKEIFYFRVENLERALVRFLRFFCEDKECEFLLFK
                     SYELSLCKAFYFNILKGNIFADFEKLIKAKKGEIFCYCEENYLNKLCTYSHSLKDANF
                     TLLSRSSFFFTTLICENLYFKNLNLPFFYANSFAKIISFLKEKSQKIIFDFN"
BASE COUNT         2970 a         1138 c         1185 g         2581 t
ORIGIN      
        1 ctaagccaaa aatcaataac acaatgaaag aaaaaattaa aaatatcata aaagtattat
       61 aaccaagtaa aattaaatat ccgtataaat ttttctgtta taataagctt ttaaataatt
      121 ttaaaggcta taagatgtac cgttttgcac cttctcccac aggtgatatg cacataggaa
      181 atttacgcgc agcaattttt aattatatct gtgcaagaca aaaaaatatg gattttatct
      241 tacgtattga agatactgat aaggctagaa atatagcagg aaaagaagaa gaaatcaaag
      301 aaattttaaa tctttttagt atttcatggc agcattacta tatacaaagt gaaaatttaa
      361 aattccatcg ccaaatggct ttaaaacttg taagcgaaaa aaaagctttt gcttgttttt
      421 gcaccgaaga agaacttgaa gcaaaaaaag agctggctaa aaaacaaggt aaagcttatc
      481 gctacgatgg cacttgtgaa aaactagccg atattgatgt tttagaatgt gaaaaaccct
      541 ttgttatccg tcttaaaaaa cctactcata ctatgaaatt tactgatttt atcaaaggcg
      601 agcttagttt tgagcctgaa aacatagact cttttgtgat tatgagaacg gataaaactc
      661 caacttataa ttttgcttgt gcggttgatg atatgcttga aaatgtcact tgtattatac
      721 gcggagaaga tcatgtttca aacactccaa aacaagaaca tatccgcgca agcttaggtt
      781 ataataaagc catgacttat gcacacttgc ctatcatttt aaacgaagaa ggtgttaaaa
      841 tgagtaaaag agaagcacat tcttctgtaa aatggctact tgaaagtgga attttaccta
      901 gcgcaatcgc gaattatctt gtcatactag gcaataaaac tccttgtgaa atttttacct
      961 tagaagaggc tataaaatgg tttgatattt ctaaagtttc aaaagctccc gcaagatttg
     1021 atcttaaaaa actcttacaa atcaatcgtg aacatatcaa aatgatcaaa gatgatgagc
     1081 ttaataaaat tttagattta aacaaagatc ttgcacaact tgctaaattt tatactcaag
     1141 aaacaagtac tataaaagaa cttaaagaaa aaatgcaagc tatttttaac gcaaaagatt
     1201 ttggcgagtt tgaaacagaa tgtaaaattt taaaagaact cttaaaagat attgaacttt
     1261 ttgaaaatta tgaagatttt aaaaatgaac ttttaaataa aagcaactta aaaggtaaaa
     1321 aatttttcat gcctttaagg ataattttaa caggaaatat ccacggacct gagcttagtg
     1381 atctttatcc ttatattaaa aattttattc acgaattagc aaggatttaa ctatggttat
     1441 agactctttt attatttcta tttttcaagt acttcaaatt gtcattaaca tttatacttg
     1501 gattattatc atcacagcac ttttaagctg ggtaaaccct gatccttata atcccatagt
     1561 gcaaatttta tataaactaa gctaccctgc ttacgcctta gttagaaaaa ttccaacacg
     1621 cattggtaat attgatcttg cgcctttgat tatagtctta gcattgcagt ttcttggcat
     1681 ttttcttggg aatatcttaa ggagtatatt gtgataaaaa aaatactcgt ttttttattt
     1741 attttttcaa gtttaaatgc tacacaatat agtatagaaa aactcaaaaa ggaagaaaat
     1801 tcacttgcta aggattatta tatttatagg cttttagaaa aaaataaaat cagtaaaaaa
     1861 gatgcacagg atttaaattc tcatattttt cgctatatag gaaaaattaa atctgaactt
     1921 gaaaaaatca tccctttaaa gccttatatc aacccaaaat atgctaaatg ctatacctat
     1981 atagcaaata ctatcttaga tgcaaattta acttgtcaaa gtgtgcgctt aaattcatta
     2041 gtttttatag cgagtctaaa ttccaaagac cgaactactt tagctcaaac ctttaaaaat
     2101 caaagacctg atttgacaaa tttattgcta gcttttaata cttctgatcc tatgagctat
     2161 atagtacaaa aagaagatat taatggtttt tttaaacttt ataattattc taaaaaatac
     2221 gacttagatt taaatacaag tttagtcaat aaactaccaa accacattgg ttttaaagat
     2281 tttgcacaaa atattattat taaaaaagaa aatccaaaat ttagatattc tatgctagaa
     2341 ataaatcctg aaaatgtaag tgaagattct gctttctatt taggagtcaa tgccttaact
     2401 tatgataaaa cagagcttgc ttatgacttt tttaaaaagg cggcacaaag ttttaaatcg
     2461 caaagtaata aagacaatgc tatattttgg atgtggttga ttaaaaacaa tgaagaagat
     2521 ttaaaaactt tatcgcaaag ttcttcttta aatatttata gtctttacgc aaaagaactt
     2581 accaacacac cttttccaaa gatagaaagc cttaatccaa gcaagaaaaa aaataatttt
     2641 aatatgcaag atccttttgc ttggcaaaaa ataaacaaac aaattcgcga tgctaacgca
     2701 agtcaactag atgtcttggc aaaagaattt gacacacaag aaaccttgcc tatttatgct
     2761 tacatattag aacgcaaaaa taattttaaa aaacattatt ttataatgcc ttattatgat
     2821 aatataaaag actataacaa aacaagacaa gctttaattt tggctattgc cagacaagaa
     2881 agtcgtttta ttccaactgc tatttcagtt tcttatgctt taggcatgat gcaatttatg
     2941 ccatttttag ccaatcacat aggggaaaaa gaattaaaaa ttccaaattt cgatcaagat
     3001 tttatgttta aacctgaaat agcatattac tttggaaact atcatctaaa ttaccttgaa
     3061 tcacgtttaa aatctccact ttttgtcgct tatgcttata atggcggtat aggatttact
     3121 aaccgtatgc ttgcaagaaa tgatatgttt aagacaggca aatttgaacc tttcttgtct
     3181 atggagctag ttccttatca agaaagccga atttacggaa aaaaagttct agctaattat
     3241 attgtgtatc gacatcttct gaacgatagt ataaagattt cggatatttt tgaaaattta
     3301 attcaaaaca aggcaaatga tctaaacaaa tcttagctac aagcctaatc tcttccttga
     3361 cactaggaag agatacttta aaataatcag tatagttgtt ttgtattata tattttaaat
     3421 actcatcatc caatttttca atattggctt ttttattatt gataaaaact tctaaatttt
     3481 gaatttttaa tgtatttgga gtaaaagata aagctaatac atcatcttta cttgtcttgt
     3541 ctagaattgg gtttaaataa gacatagtta taatggcatt aatcttatct tgtgtgattt
     3601 tgtatttttg agtaaacatt aaagtttgag attttaaatt tgtatccaca atcgcctgat
     3661 cttttaaaga acaagctcca agcaaaaaag cacctaaaat tacactataa attttcattc
     3721 tttttccata ttttttagta ttattgtagc cttttaaccc tattttttgg tttaaaaaga
     3781 tataattttg caaaaaaatt aagagtatat tttatgaaac aacttattat agcttttagc
     3841 gggccttcaa attcaggaaa aactacactc atcactaaaa tagctgataa ttttttgcaa
     3901 caaaatttaa aagttttaat cattaaacat gaccctgccg ataaagctca atttgatttt
     3961 aacggtaaag atagttttaa attttttcaa agtggagctg aagtcatggt tttaagccct
     4021 acaagaacaa cttttttttc tcatgaaaat agagatattt taaaagcttt aaaattaagc
     4081 cctgattttg acatttgttt ggttgaagga ttaaaaactc ttgatttacc acgcattagc
     4141 gtattttgca aagaaattga tgaaagttat tttatttttt caaacgccat tgcaagctat
     4201 gaaaaaattt ctcaccctta tcttacttgg cttgatttaa acgatataca agctatttgc
     4261 caatacatac ttaaaaatgc taaaaattta caaggagaat tataaaatgc aagaagtgat
     4321 ttcttatata caaaaagcgg ttttagaaat ttctaacgct ttaaaatttc ccgatacaag
     4381 ctacagtcaa aatcaaaatt ttacaggcga tacccaactc aaatttgatg ttttaagtga
     4441 tgaaattatc acaaaaaccc taagtcaatg ttcaagtatt aaagccatca tcagtgaaga
     4501 aaaagatgaa attttaacgc ttaacgagag ggcaaatttt atcgtagctt atgatccttt
     4561 agacggttct agcttaatgg atgttaattt tgccataggt tctatttttg ctatctatga
     4621 agaaaaagca agtgctaaaa atttaagagc tgcgctttat agtatgtatg gagcgcgatt
     4681 agaacttgtg atttgcaaag atcagccaaa actttatcgc ttaaatgcaa ataatgaatt
     4741 tatttttata aaagatctta gaatgaatga aaaaggcaag attaatgcta caggcggaac
     4801 gcaaaaattt tgggaagaaa aacacgctaa atttatcaaa agtctttttg atgaaggcta
     4861 tcgcttaaga tattctggag ccatggtaag cgatatcaat caaattttat taaaaagggg
     4921 tggcattttt agctatcctg caacacaaga tgcgcctaat ggcaaacttc gtgccttttt
     4981 tgaagtcttt cctctagcct ttatcataga aaaagcaggc ggaaaaacta caaatggaaa
     5041 aaaccgctct ttacttgaac ttgaatttga taaaatccat gcgacaactc cttgtttttt
     5101 tggctcagaa tatgaaattt caaaactttt aaaggcttac aatgaatgaa gttagagatg
     5161 aatttgagca agatatggat aaaaaaaaag aaattttact ttcatgtcaa aactcaaaaa
     5221 acctaaactc ttgttataat tgcgatgaaa tttttaactg ccaaactaga aaaaattatg
     5281 ttgatgcagt ctataacagt atgtctaagg gtaaaaccga aggcggattt gacttttaaa
     5341 ggaaaaaaat gcgttatatt acaacaccaa tttattatgt aaatgatgta cctcatttag
     5401 gtcatgctta tactaccatc atagccgata ctttagcaag attttatcgt ttgcaaggac
     5461 atgaaacaag atttctaaca ggaacagatg agcatggaca aaaaatcgaa gaagctgcca
     5521 aactaagaaa ttccactcct caagaatacg ctgataaaat cagttttgaa tttaaaaaat
     5581 tatgggatga atttgaaatc acctatgata tttacgcaag aacaactgat acaaggcata
     5641 ttgaatttat taaagctatg tttttaaaaa tgtggcaaaa aggtgatatt tataaagatg
     5701 aatacgaagg acactattgt atttcttgtg aaagcttttt tactcaaagt cagcttatta
     5761 acgattgttc ttgcccagat tgtggcaaac aaactagaat tttaaaagaa gaaagctatt
     5821 ttttcaaact ttcaaaatat caagataaaa ttttacaatg gtatgaagaa aaagatccca
     5881 tcttgccaaa aaacaaaaaa aacgaactta taaattttgt ccaaaacggc cttaaagatc
     5941 tttccattac aagaacaagt tttgattggg ggattaaact gcctcaagaa attaatgatg
     6001 ataaacatat tatttatgta tggcttgatg cactttttat ctatgtaagc tcacttgact
     6061 ttcaaaacaa gggagaaaat gctaaatttt ggcctgcgca tgtgcattta gtaggaaaag
     6121 atatcttgcg ttttcatgcc atttattggc cagctttttt aatgagcgtg gatttgcctt
     6181 tgccaaaatt tataggtgca catggctggt ggactaaaga aggtgaaaaa atgagcaaat
     6241 ctaaaggcaa tgttgtaaaa cctaaagaag tagttgatgc ctatggaagt gaagctttta
     6301 gatatttctt gcttagagaa gtgccttttg gtaacgatgg ggattttagc gaaaatatgc
     6361 tgataaatcg tatcaatgca gagcttagca atgaatttgg aaatttactt aatcgcatta
     6421 taggtatgag tacaaaatat tctcaaggaa atatttcaaa agaaggtgtt ttaaaatttt
     6481 acaatgccga actaaatcaa gcaaaagaac acttaaattt agcggtagaa tttttagaaa
     6541 acttacagtg taatcgttat ttagaagaac tttttaaagc cttaagtgtg gcaaatttag
     6601 ccattagtaa atacgaacct tggagtttaa tcaaagaaaa caaacacgaa caagctaatg
     6661 ctttagtagc actttgtgca aatattttag ccaaaacaag ccttttatta agccctactc
     6721 taccaaagtc ctctcaaaag gtggccttag ctttaaattt tgaaatttcg tctgcaaatt
     6781 acacaaaaat gatacttgat aatgaacttt tagattttaa agcaaatcct tgcgaagctt
     6841 tatttccaaa agtagaaaaa gctcttttaa aacaagaaat taaagaagaa cctaaaaaag
     6901 aagaaagtcc taaaataaaa atcgatgatt ttgcaaaaat tgaaatcaaa gttgctaagg
     6961 tacttgattg tcaaaatata gaagggagtg aaaaactttt aaaatttcaa ctcgaacttg
     7021 acgataaaga aatccgtcaa gtactctcag gcatagcaaa atactataag gccagtgatt
     7081 taatcggtaa acaagtttgc gttataagca atcttaaaaa agctaaaatt tttggacatg
     7141 aaagcgatgg tatgatactt tctgcaaaaa gcggagataa acttgtttta atcgcccctg
     7201 aacaacttgt gcaaaacggc tctttagtgg gttaaaatat gcaaattagc aatttaggcg
     7261 aactgttaaa cgcaacacta attcatgaag gtagtgtttt aagcgtggaa ggttttgcca
     7321 taaatttaaa cgaacttaaa acaggctttg ccttctttaa taacgataaa aaagaaattg
     7381 cccaagctgt aaaaaaaggc gcttatgcta taattacaga aaatgacatt actattgaag
     7441 ataaagaaat tttttacttt agagtagaaa atctagaacg agctcttgta agatttttac
     7501 gctttttttg cgaagataaa gaatgtgaat ttttactttt taaatcttac gaactaagtc
     7561 tttgcaaggc tttttatttt aacattttaa aaggaaatat ttttgctgat tttgaaaaac
     7621 taatcaaagc aaaaaagggt gaaatttttt gctactgtga agaaaattac ttaaataaac
     7681 tttgcaccta ttctcatagt ctaaaagatg ctaattttac cttattatcg cgatctagct
     7741 tcttttttac aactttgatt tgtgaaaatt tatattttaa aaatcttaat ttgccttttt
     7801 tttacgcaaa tagttttgca aaaattattt cttttttaaa agaaaaaagt caaaaaataa
     7861 tatttgactt taat
//
LOCUS       DAPIYB010000076         7717 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.077, whole genome shotgun sequence.
ACCESSION   DAPIYB010000076 DAPIYB010000000
VERSION     DAPIYB010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7717
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.077"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(24..1274)
                     /locus_tag="RJ318_001397"
     CDS             complement(24..1274)
                     /locus_tag="RJ318_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HDV7431250.1"
                     /translation="MLKQKITQAPKTKISQTLRSWLPILQANIEDLKENLDKFAEDNP
                     FLNVQDSIQIHDKGKNYFDSFYKHNVNSAFVDSKGLAKKSVYELLNEQILPPLFPTSK
                     SQELAKKIIECLNEEGYFEHDEEFLKEYSLEEIERVRARFKFLDPVGVGAKDYKEAFL
                     FALENMELDEDIDEFCRMLIMDFENIQNYTKEPLYKEALAVLKRFSTPPFLEYFEDSR
                     IIVPDIFVYKENGEIKVKINDDYYPEISIQTDGLEHDFLSHYIKEAKNLVDALAMRKA
                     TLYKIGLMIVEYQYDFFMGKEIKPMTFKDLALDLERNASTISRAVANKYLSCERGLIP
                     LRDFFAFALDEEGETSNVGVKEFVANLVKNEDRNKPLSDSKILELIKEEFKVDIGRRT
                     ITKYRKHLNIASSTDRKKLYELEG"
     gene            complement(1274..2002)
                     /gene="lptB"
                     /locus_tag="RJ318_001398"
     CDS             complement(1274..2002)
                     /gene="lptB"
                     /locus_tag="RJ318_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDV7431251.1"
                     /translation="MSKLEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTT
                     TFYMICGLISPSSGKVLLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLA
                     AQIFYKDKKILHDKVEQMLELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLL
                     DEPFAGVDPIAVAEIQTLIKELKRLGIGVLITDHNVRETLAICDRAYVIRSGSLLASG
                     NADEIATNKDVKKYYLGAEFKLLD"
     gene            complement(1995..2402)
                     /gene="tsaE"
                     /locus_tag="RJ318_001399"
     CDS             complement(1995..2402)
                     /gene="tsaE"
                     /locus_tag="RJ318_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDV7431252.1"
                     /translation="MKEFILAKNEIKTMLQIMPKEGVVLLQGDLASGKTSLVQAWVKF
                     LGLDVRVDSPTFSTMQKYENHDICIYHYDIYQEGLEGLLANGLFENFFEKGLHLVEWG
                     GENLKKTLMKFGISTIQIKISIKDDKRKYEIYE"
     gene            complement(2399..2644)
                     /locus_tag="RJ318_001400"
     CDS             complement(2399..2644)
                     /locus_tag="RJ318_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HDV7431253.1"
                     /translation="MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVIVKASKEVKVG
                     DIITLHFTEYTQKYKVLALPSTKSIPKNAQNEYVVKL"
     gene            2800..4020
                     /locus_tag="RJ318_001401"
     CDS             2800..4020
                     /locus_tag="RJ318_001401"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDV7431254.1"
                     /translation="MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGE
                     ELEPARKKALSLGIKEENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIARPLI
                     AKTQAQIALQTGADAVSHGATGKGNDQVRFELGYLAFSPDLKIIAPWREWDLNSREKL
                     FAYAQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDPAHAPEEDMWRWSKSPKDAP
                     NESEIIELDFQKGDLVAINGEKLSPAGLLTKLNELGCKHGIGRLDIVENRYVGMKSRG
                     CYETPGGTILLKAHRALESITLDREAAHLKDELMPKYASLIYNGYWFSPERMMLQALI
                     DESQIHANGRVKLELYKGNVMVIGRESANDSLFNAAYCTFEEDEVYNQKDAAGFIKLN
                     ALRFIIAGKNGRKF"
     gene            4033..4476
                     /locus_tag="RJ318_001402"
     CDS             4033..4476
                     /locus_tag="RJ318_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDV7431255.1"
                     /translation="MKVLLIKDVKALGKAGEIKEVKDGYGQNFLIAKGFAKAATNEVL
                     RKYESDKKKEAENLRFEIANLEKLKEELSKITLEISKPVGANGSLFGGVTKDEIAHAL
                     KEQSHIEIDKKSLECDTLKSLGIHEVSVKLGHAIHAKFNINIKAE"
     gene            4476..5018
                     /gene="hslV"
                     /locus_tag="RJ318_001403"
     CDS             4476..5018
                     /gene="hslV"
                     /locus_tag="RJ318_001403"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDV7431256.1"
                     /translation="MFHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNG
                     KVLAGFAGSTADAFNLFDMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVL
                     DRNHIFLLSGTGDVVEPEDGQIAAIGSGGNYALSAARALAKHTDLDEEELVKSSLQIA
                     GEICIYTNTNIKTYVIEDEK"
     gene            5015..6334
                     /gene="hslU"
                     /locus_tag="RJ318_001404"
     CDS             5015..6334
                     /gene="hslU"
                     /locus_tag="RJ318_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HDV7431257.1"
                     /translation="MNLTPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRMQLSPELQ
                     DDIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDL
                     ANAALNLVKNEQREKNKDKIDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEKMRTK
                     LRNGDLDESTIEIEISQNMFDTNPNLPPEMGAMQDIVKVIGVGSKKVKKEMKIKDAKN
                     ALKNEAGEKILDQESIKSEALKRAENEGIIFIDEIDKIAVSSGNSNRQDPSKEGVQRD
                     LLPIVEGSNVQTKIGTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDK
                     ALYEILTRPKNSLLKQYSQLLKTENLELEFDDEAIKEIAKIASRANEEMQDIGARRLH
                     TVIEKLLEDLSFEADEYAGKKFVVDKKMVEEKLGDIIENKDLARYIL"
     gene            6331..7206
                     /gene="era"
                     /locus_tag="RJ318_001405"
     CDS             6331..7206
                     /gene="era"
                     /locus_tag="RJ318_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDV7431258.1"
                     /translation="MKSGFVSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKA
                     IVMHEKNQIIFIDTPGLHESGATLNQLLVQSAIKSMGDCDVILFVASVFDSTKDYENF
                     LSLNPQVPHIITLNKVDLTDNATLLKKLSEYAKFSQHFKAIIPYSSKKKSYKKGLLDE
                     IVKYLDEHEYFYDPEFLSASSEKEIYRDFILESIYENLSDELPYSSEVLIHRTKDTPN
                     LLILEANIITDTNSHKGMLIGKEGATLKRIGKDARFKISKLAQKKVLLKLFVTVKKNW
                     QKDEEFLKKLLNDEN"
     gene            7193..>7717
                     /locus_tag="RJ318_001406"
     CDS             7193..>7717
                     /locus_tag="RJ318_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431259.1"
                     /translation="MMKINSLNKINFIKSTDLLYAQRTGISKEDELFNNLTADFKLSK
                     PFDYQIAFFKHNEIYHCFLAPVYKLKKSRFCFPEPLIFQALFDERFIEESDYCVLNLY
                     DQTLYLYFYQEGKFINLKKIENFNPGNMDLFFKQNRFTELLKHYESKLLLYQDLNTIK
                     HYFSSQIKCLNLNDI"
BASE COUNT         2845 a         1280 c         1206 g         2386 t
ORIGIN      
        1 gggtttgata gattgataga attttatcct tcaagttcat ataatttttt tctatctgta
       61 gaacttgcta tattaagatg tttgcgatat tttgtaatag ttcttcgccc tatatcgact
      121 ttaaattctt ctttgattaa ttctaaaatt ttactatcac ttaaaggttt atttcgatct
      181 tcattcttta ctaaatttgc tacaaattct ttaacaccta catttgaagt ctctccctct
      241 tcatcaagag caaaagcaaa aaaatcacgc aagggaataa gtcctctttc acaacttaaa
      301 tatttatttg ccacagctct tgatatagtc gaagcattgc gttctaaatc aagtgctaaa
      361 tccttaaaag tcataggttt tatctctttt cccatgaaaa aatcatattg atattctact
      421 atcataagcc ctattttata aagagtagct tttctcatcg ctaaagcatc aactaaattt
      481 tttgcttctt tgatgtaatg acttaaaaaa tcatgctcta aaccatcagt ttggattgaa
      541 atttcaggat aataatcatc attgattttt actttaattt caccattttc tttataaaca
      601 aaaatatcag gaacaattat acgagaatct tcaaaatatt ccaaaaaagg aggagtgcta
      661 aaacgcttaa gtacagccaa tgcttcttta tataaaggct ctttggtata gttttgtata
      721 ttttcaaaat ccataatcaa cattctacaa aactcatcaa tatcttcatc taactccata
      781 ttttcaagag caaataaaaa tgcttcttta taatctttag ctcccactcc tacaggatct
      841 aaaaatttaa atcttgctct tactcgctca atttcttcca aagaatactc ttttaaaaat
      901 tcttcatcgt gttcaaaata tccttcctca tttaagcatt ctataatttt ttttgcaagt
      961 tcttgagatt tgcttgtagg aaacaaagga ggaagaatct gttcatttaa aagctcataa
     1021 acactttttt tggcaagtcc tttactatcc acaaaagccg aatttacatt atgtttataa
     1081 aatgaatcaa aataattctt acccttatca tgaatttgta tcgaatcttg aacatttaag
     1141 aaaggattat cctcagcaaa tttatctaaa ttttctttta aatcctctat atttgcttgt
     1201 aaaatcggca accaagagcg taaagtttga gaaattttag tcttaggtgc ttgggtgatt
     1261 ttttgcttta acatcaatca aggagtttaa actccgctcc taaataatac tttttcacgt
     1321 ctttattggt tgcaatttca tcagcattcc cactagcaag caaagagccc gatcttataa
     1381 cataagctct atcacaaata gctaaagtct cacgcacatt atgatcggta attaaaaccc
     1441 caatccccaa tcttttaagc tctttaatta aagtttgaat ttcagccact gctataggat
     1501 caacacctgc aaaaggctca tcaagaagca aaaacttagg ttcacacatc aagcttctag
     1561 cgatctcaca acgccttctt tcacctccac ttaaacttaa acctttcctt aaacgaatag
     1621 gctctatact taaaagttca agcatttgct caactttatc atgtaaaatt tttttatctt
     1681 tataaaaaat ctgagccgct aaaagcaggt tatcttctac gcttaaatcc ttaaaaatac
     1741 tactttcttg aggtaaataa cctatccctg atctagctct tttatttaaa ggatcttttg
     1801 tcacatctaa accgtctaaa agaacttttc cactacttgg ggaaataagt ccacatatca
     1861 tataaaaagt tgttgttttt cctgcaccat ttggccctaa aagccccaca acttctccgc
     1921 tattaacctc caaagaaatt ccatgtataa tcttagtttt tttaataatt ttttctaaat
     1981 ttacaatttc taatttactc ataaatttca tactttcttt tgtcatcttt aatgctaatt
     2041 ttaatctgga tagtagaaat tccaaatttc attaaagttt ttttcaaatt ttcaccgccc
     2101 cattcaacca aatgcaaacc tttttcaaaa aaattttcaa ataaaccatt cgctaaaagt
     2161 ccttctaaac cttcttgata aatatcataa tgataaatgc aaatatcatg attttcatat
     2221 ttttgcatag tggaaaaagt tggagaatct acccttacat caagaccaag aaatttaacc
     2281 caagcttgca ccaagcttgt ttttccgcta gccaaatctc cttgaagcaa aacaacacct
     2341 tctttaggca ttatttgaag catcgttttg atctcatttt ttgctaaaat aaattctttc
     2401 ataattttac cacatattca ttttgtgcgt ttttaggaat gcttttcgta ctaggtagag
     2461 ctagcacttt atatttttga gtgtattcag taaaatgtaa agtgataata tcacctacct
     2521 taacctcttt actcgcctta acaataacac cattaatccc cactacacca cttttacaca
     2581 tatcttcaga aatagctctt cttttcgtga tattaactac atttaaaaat ttatctactc
     2641 tcataaaagc aattttagca aaaaaaatca atttttggaa caaaatttgc ttacgccttt
     2701 gctttatttt tttaagaaaa tagcaagtaa aaacttttct ttaatgaaat ttggatacaa
     2761 ttttataatt ttcaaaccta ttttaacaaa ggatatctta tgaaaaatga agtaaaaaaa
     2821 gtagttttag cgtattctgg ggggcttgat acgagcatta ttttaaaatg gcttcaagat
     2881 gagtataatt gtgaagttgt aacttttaca gcagatattg gtcaaggcga agaactcgaa
     2941 cctgcgagaa aaaaagccct ttctttaggc ataaaagaag aaaatatttt cattaaagat
     3001 ttaagagatg aatttgttaa agattatgta tttcctatgt ttagagccaa tgcaatttat
     3061 gaaggagagt atcttttagg aacaagtata gcaagaccac tcatagcaaa aactcaagca
     3121 caaattgccc tgcaaacagg tgctgatgcg gtaagtcatg gcgccacagg caaaggaaat
     3181 gatcaagtgc gttttgaact tggttatctt gcttttagtc ccgatttaaa aatcatcgct
     3241 ccatggcgtg agtgggattt aaacagtcgt gaaaaactct ttgcttatgc gcaaaaacat
     3301 ggcattgata tttctaagaa aaaaggaaaa tccccttatt ctatggacgc aaatttactt
     3361 catatttctt acgaaggact tgttttagaa gatcctgcac acgcacctga agaagatatg
     3421 tggagatgga gtaaaagccc aaaagacgct ccaaatgaaa gtgaaattat agaacttgat
     3481 ttccaaaaag gagatttagt agcgataaat ggagaaaaac taagtcctgc aggactttta
     3541 accaaactta acgaactagg ctgcaaacac ggtataggac gccttgatat agtagaaaat
     3601 cgctatgtag gcatgaaaag ccgtggttgt tacgaaactc caggcggtac tatactttta
     3661 aaagcacata gagcgcttga aagcatcacg cttgatagag aagcagcaca cttaaaagat
     3721 gaactcatgc caaaatacgc gagtttaatt tataatggct attggttctc gcctgaaaga
     3781 atgatgcttc aagccttaat cgatgagtct caaattcacg ccaatggcag agtaaaactc
     3841 gagctttata aaggcaatgt gatggttata ggacgcgaaa gtgcgaacga tagcttgttt
     3901 aacgcagctt attgtacttt tgaagaagat gaagtgtata atcaaaaaga cgcagcaggc
     3961 tttatcaagc ttaatgcttt gcgttttatc atcgcaggaa aaaatggaag aaaattttaa
     4021 taaaggaata aaatgaaagt attattaatc aaagatgtaa aagcacttgg aaaagcagga
     4081 gaaataaaag aagtaaaaga cggctatgga caaaatttct taatcgctaa aggctttgct
     4141 aaagcagcta ctaatgaagt tttaagaaaa tatgaaagcg acaagaaaaa agaggctgaa
     4201 aatttacgct ttgaaatcgc aaatttagaa aaactcaaag aagaacttag caaaatcact
     4261 cttgaaattt caaaacccgt aggtgcaaat ggaagtttgt ttggtggcgt aaccaaagat
     4321 gaaatcgctc acgccctaaa agaacaaagc catatagaaa tcgataaaaa aagtttagaa
     4381 tgtgatacct taaaaagctt aggaatccac gaagtaagcg taaaacttgg acacgcaatc
     4441 catgctaaat ttaacataaa tataaaggca gaataatgtt tcacgcaaca acgattttag
     4501 cttacaaagg taaaaataaa tccgtaattg gcggagatgg acaagtaagc tttggaaata
     4561 cggtgctaaa aggcaatgct gtaaagatta gaaaactcaa caatggcaaa gttttagcag
     4621 gttttgcagg atcaacagct gatgctttta atctttttga tatgtttgaa aatctccttc
     4681 aaagttctaa aggcgatctt ttaaaagcag caattgactt ttctaaagaa tggagaaaag
     4741 acaaatacct aagaaaactt gaagccatga tgctcgtact tgatagaaat cacatttttc
     4801 tactttctgg tacaggcgat gtggtcgaac ctgaagatgg acaaatcgca gccataggaa
     4861 gtggtggaaa ctatgcgctt tcagctgcta gagccttagc aaaacatacc gatttagatg
     4921 aagaagaact tgtaaaatca agtcttcaaa tcgcaggtga aatttgcatt tataccaata
     4981 ccaatatcaa aacttatgta attgaggatg agaaatgaat ctaactccaa aagaaatcgt
     5041 taaattttta gatgattatg ttataggaca aaaaaaagct aaaaaaatca tagctatagc
     5101 tttaagaaat cgctaccgca gaatgcaact tagccctgag ttgcaagatg atatagtgcc
     5161 aaaaaatatc ttgatgatag gttctacagg tgtaggaaaa acagaaatcg ctaggcgttt
     5221 agctaaaatg atgggctttc ctttcatcaa aatcgaagca agtaaatata ctgaagtagg
     5281 ttttgtaggt cgtgatgtag aaagcatggt aagagatctt gccaatgcgg ctttaaattt
     5341 ggtaaaaaat gagcaaagag aaaaaaacaa agataaaatc gatgaattta tagaaaataa
     5401 aattttagaa aaacttttac cacctttacc aaagggtatc agcgatgaaa aacaagaaga
     5461 atataaaaac agtcttgaaa aaatgagaac taaactaaga aatggcgatc ttgatgaaag
     5521 caccatagag atagaaattt cacaaaatat gtttgatacc aatcccaacc tacctcctga
     5581 aatgggtgca atgcaagata tagttaaggt tataggcgtt ggcagtaaaa aagtcaaaaa
     5641 agaaatgaaa atcaaagacg ctaaaaatgc tttaaaaaat gaagcaggag aaaaaatcct
     5701 cgaccaagaa agcatcaaaa gcgaagcctt aaaaagagcg gaaaatgaag gtattatttt
     5761 tattgatgaa atcgataaaa tcgctgtttc aagcggaaat tcaaaccgcc aagatccaag
     5821 taaagaaggg gtgcaaagag acttacttcc tatagtcgag ggatcaaatg tacaaacaaa
     5881 aataggtact ttaaaaaccg atcatattct ttttatcgct gcaggggctt ttcatcttag
     5941 caaaccaagt gatcttatcc ctgaactgca aggacgcttt cctttaagag tggaattaga
     6001 tagtcttgat gataaagctc tttatgaaat tttaacacgc cctaaaaatt cacttttaaa
     6061 acaatactct cagcttttaa aaactgaaaa tttagaactt gaatttgatg atgaagccat
     6121 taaagaaata gcaaaaatag cttcaagagc caatgaagaa atgcaagata taggtgctag
     6181 acgcttacat actgtgatag aaaaattact tgaagatcta agttttgaag ctgatgagta
     6241 tgcgggtaaa aaattcgtag tggataaaaa aatggtagaa gaaaaactcg gagatatcat
     6301 agaaaataaa gatcttgcaa ggtatatttt gtgaaaagtg gctttgttag tatcataggg
     6361 cgtactaatg caggaaaaag tactttaatc aattccttat tagaagaaaa aatcgcccta
     6421 gtttctcaca aacaaaacgc cacaaggcgt aaaatcaaag ccatagtgat gcatgaaaaa
     6481 aatcaaatca ttttcatcga taccccagga cttcacgaaa gcggtgctac gcttaatcaa
     6541 ctgcttgtcc aaagtgctat taaatccatg ggggattgtg atgtgatttt atttgtggcg
     6601 agtgtttttg atagtacaaa agactatgaa aattttctta gtctaaaccc acaagtacca
     6661 catatcatca ctttaaataa agtagattta accgacaatg ctacactttt aaaaaaactt
     6721 agcgaatatg caaaatttag ccaacatttt aaggctatca ttccttattc ttctaagaaa
     6781 aaaagctata aaaaaggctt gttagatgag atagtaaaat atcttgacga acatgaatat
     6841 ttttatgatc ctgaattttt aagtgcgagt agcgaaaaag aaatttatag agatttcata
     6901 cttgaaagta tttatgaaaa tttaagcgat gagcttcctt atagtagcga agtgcttatc
     6961 catcgcacca aagacacacc taatctttta atcctagaag ccaatatcat cacagataca
     7021 aactctcaca agggtatgct tataggaaaa gaaggggcaa ctttaaaaag aataggcaaa
     7081 gatgcacgct ttaaaatttc aaaacttgcc caaaaaaagg tacttttaaa gctttttgta
     7141 acagtgaaaa aaaactggca aaaagatgaa gaatttttaa aaaaacttct aaatgatgaa
     7201 aattaattca ttaaataaaa taaattttat aaaatctaca gatttacttt atgctcaaag
     7261 aacgggaata tccaaagaag acgaactttt taacaattta actgcagatt ttaagctaag
     7321 caaacccttt gactatcaaa tagctttttt taaacataat gaaatttatc attgtttttt
     7381 agcgcctgtt tacaaattga aaaaaagtcg tttttgcttt cctgagcctt taatttttca
     7441 agctttgttt gatgaaagat ttattgagga aagtgattat tgtgttttaa atttatatga
     7501 tcaaacttta tatttatatt tttaccaaga aggaaaattt atcaatctta aaaaaatcga
     7561 aaatttcaat ccaggtaata tggatttatt ttttaaacaa aatcgattta cagaactttt
     7621 aaaacactat gaaagcaaat tgctacttta tcaggatttg aatacaatca aacattactt
     7681 ctcatctcaa ataaaatgtt taaatctaaa tgatatt
//
LOCUS       DAPIYB010000077         7401 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.078, whole genome shotgun sequence.
ACCESSION   DAPIYB010000077 DAPIYB010000000
VERSION     DAPIYB010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7401
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.078"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            107..1597
                     /locus_tag="RJ318_001407"
     CDS             107..1597
                     /locus_tag="RJ318_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDV7431260.1"
                     /translation="MLTWMQHHKKYLVVTIWVSTIAFVGAGFLGWGAYDFNLNRSSSV
                     ATVGNEKIGFSEFDTRYRQILSYYNQISNGALTPENAEQLGIKNIALSSLVEDKLLLN
                     FAKDLGIGVNENQILQKLANTREFQDPTGDFNKTIYYELLNANNLAPKDYETQLANEV
                     ITDKLNQIFNIPSKDEELKMLASSYFMQDALSIAKIDYDKKNIKINEEDLKKLWNEHK
                     EDYKTKKIYEISTYFLPVSNEKIDDKELEKFYNQDENKLKYKDFAGKVMDFQSAKNEV
                     AKDYALMQLKNVANAKFLDLKNGKDNFQKDQNISESDVYYPIDLLNKAKNGDVLRPAP
                     YNNGYIIVKLNKVDPIRNKTFEEAREEVLPMYLSEQARKNLEEKAKNSLVNFKGDDIG
                     FVSRDSSRESVKVSDKILNDSEFAYFLMNVFNTDQNSSYVVINDNKAILYKINKQKLD
                     MNSDKFEQYKTMLEQNLQNLKANELKQELVDELKKIYPIKIYYKGN"
     gene            1594..2982
                     /gene="ftsA"
                     /locus_tag="RJ318_001408"
     CDS             1594..2982
                     /gene="ftsA"
                     /locus_tag="RJ318_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDV7431261.1"
                     /translation="MILNILGIDLGSTQTCAIIAQKDEDGLKIIGFSKSKTNGVKKGA
                     ITNIELASKSIEEAVRSAEMMSGVHYDRVVVSISGAYTKSVDSIGVVNIPNHEIGIKE
                     IHRAVSTAKHTANLPSGYEIIHVLPYNFKVNDLEHVDDPLGMSGNRLEVSTHIVISQE
                     SHIKNLKKAVELADLRVDNIVLSGYASAIACLDDSEKELGAVLIDMGGAICDMVVHTG
                     NSIRYNDCLQIGSINITQDLSMALHTPLKEAEKIKLNYAALSQQPNTLIQIPSMGDER
                     KVNEVSLDIISNVIYARAEETLMILAKILSDNRYANAIGGGVVLTGGMTKLAGIDELA
                     PATFDNRSVRLATARKDLITGFSEIFNDPENTCAIGLCLYGAGYFTPYELDSNEKLRY
                     KGEIENFNRQIKQDIVLQKDTESEIKSDFFDENLQENDTIAIQEQLDFKEPKEKKPSV
                     FSNIWHKIMNQF"
     gene            2998..4110
                     /gene="ftsZ"
                     /locus_tag="RJ318_001409"
     CDS             2998..4110
                     /gene="ftsZ"
                     /locus_tag="RJ318_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDV7431262.1"
                     /translation="MSEFLVEEMQHNKGAKIKVIGCGGGGGNMINHMVKMGLNDLDLI
                     AANTDAQAISISLAKTKIQLGEKKTKGLGAGMLPEVGAESARESFEEIKASLSQSDIV
                     FIASGFGGGTGTGATPVIAQAAKEIGALTVSVVTMPFAFEGKQRKKLAESGLLELKKE
                     SDSILVIQNEKLLSIIDKKAGIKDAFRLVDDILARAVKGMVSILLDNGDINVDFADVR
                     TIMSHRGLALMGVGSASGENAIEEALSNAIESPLLDGMDIKGAKGVILHFKTSSNCSL
                     FEISAAANSIQEIVDENAKIIFGSTTDDSMEDRVEVTIIATGFEDKDTVAKKSTEEAQ
                     ASKKNPYLSLKKVSGGYDEEIMAQIETPTFLRRQMD"
     gene            4266..5078
                     /locus_tag="RJ318_001410"
     CDS             4266..5078
                     /locus_tag="RJ318_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body protein"
                     /protein_id="HDV7431263.1"
                     /translation="MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADF
                     KRIFKETQDELPIENHTRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMT
                     REDAFYLVQTKDGEVRLTKDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNG
                     AVQISVDKNGSIEVDGAQNARLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLKNSNAI
                     RQGFSQGSNVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAINKLAAVK"
     gene            5107..5898
                     /gene="flgG"
                     /locus_tag="RJ318_001411"
     CDS             5107..5898
                     /gene="flgG"
                     /locus_tag="RJ318_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HDV7431264.1"
                     /translation="MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADL
                     MYQVMKYAGTSTSATTLSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNG
                     FFQIQLPDGTIGYTRNGQFTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSV
                     MLPGEQQETQIGQVELVQFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHG
                     FIELSNVQLVEEMTDLITGQRAYEAGSKAITTSDDMLGIVNQLKR"
     gene            complement(5965..7395)
                     /gene="glnA"
                     /locus_tag="RJ318_001412"
     CDS             complement(5965..7395)
                     /gene="glnA"
                     /locus_tag="RJ318_001412"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDV7431265.1"
                     /translation="MGKFVNNIDDFFKFCKQNEVLFVDFRFTDMIGTWHHITYNLHAI
                     NEETFQTGIPFDGSSIHGWQPIEKSDMILKPDAQSAFLDPFTADPTIIVFCDVYDIYK
                     GQMYEKCPRSIAKKAIEHLKNSGIADTAYFGPENEFFVFDSVKIVDTTHCSKYEVDTE
                     EGEWNDDREFTDSYNTGHRPRNKGGYFPVQPIDSLVDIRSEMVQTLEKVGLKTFVHHH
                     EVAQGQAEIGVNFGTLVEAADNVQIYKYVVKMVAHLNGKTATFMPKPLYGDNGNGMHV
                     HMSLWKNGVNLFYDKDGYSGLSQTAINYIGGILKNARSVAAFTNPSSNSYKRIVPGFE
                     APCILTYSCQNRSASCRVPYGIGKNSARIEIRFPDSTANPYLAFVSLLMAGLDGIKNK
                     TIPVGPMDENLFDLTLDEIREKGIEQLPHTLRGSLEALIRHNSYLKPVMSDIFIDDYQ
                     HLKFETQVWPVEARPTAYEFKTCYSC"
BASE COUNT         2642 a         1008 c         1370 g         2381 t
ORIGIN      
        1 cataaaattt aaagaacaaa tattttttgg taaaaatttt ataattaaac tccacttaaa
       61 cacttctacg atacaatatc tggtttaaat ttaatcaagg aatgatatgc ttacttggat
      121 gcaacatcac aaaaaatatc ttgttgttac tatatgggtt agtactatag cttttgttgg
      181 cgctggcttt ttaggttggg gtgcttatga ttttaatctc aatagaagtt cgagtgttgc
      241 aactgtagga aatgaaaaga taggttttag cgaatttgat actagatata gacaaatttt
      301 aagttattat aatcaaatta gcaatggtgc tttaactcca gaaaatgctg agcaactagg
      361 cattaaaaat atagctttaa gctctcttgt tgaagataag cttttgttaa attttgccaa
      421 agatttgggt attggtgtga acgagaatca aattttacaa aaacttgcaa atactagaga
      481 atttcaagat cctacagggg attttaacaa aacaatttat tatgaacttt taaatgccaa
      541 taatttagct ccaaaagatt atgaaacaca acttgcaaat gaagtaatta ccgataaact
      601 taatcaaatt tttaatattc ctagcaaaga tgaggaatta aaaatgttag cttctagtta
      661 tttcatgcaa gatgctttaa gtattgcaaa aattgattat gacaaaaaaa atattaagat
      721 taacgaagag gatttaaaaa agctttggaa tgaacataaa gaagattata aaactaaaaa
      781 aatatatgaa atttcaactt attttttgcc agttagcaat gagaaaattg acgacaaaga
      841 attagaaaaa ttttataatc aagatgaaaa taaactaaaa tataaagatt ttgcaggtaa
      901 agtgatggat tttcagtctg ctaaaaatga agttgctaaa gattacgcct taatgcaact
      961 aaagaatgtg gctaatgcta aatttttaga tttaaaaaat gggaaagata attttcaaaa
     1021 agatcaaaat attagtgaat ctgatgttta ttatccaatt gatcttttga ataaagctaa
     1081 aaatggagat gttttacggc cagcacctta taataacgga tatatcatag ttaaactaaa
     1141 taaagtagat cctataagaa ataaaacttt tgaagaagct agagaagaag ttttacctat
     1201 gtatttaagc gaacaagcta gaaaaaattt agaagaaaaa gctaaaaata gtttagtaaa
     1261 ttttaaaggc gatgatatag gctttgtaag tcgagatagt tctcgcgaga gtgtaaaggt
     1321 tagcgataaa atattaaacg attctgaatt tgcttatttt ttaatgaatg tatttaatac
     1381 tgatcaaaat agttcttatg tggtcattaa tgacaataaa gcaatattat ataaaataaa
     1441 taaacaaaaa ttagatatga actccgataa atttgaacaa tacaaaacta tgcttgaaca
     1501 aaatttgcaa aatttaaaag caaatgagct taagcaagaa cttgttgatg aacttaaaaa
     1561 gatatatccg ataaaaattt attataaagg gaattgattt tgaatatatt aggaattgac
     1621 ttaggctcaa cccagacttg tgccattatt gctcaaaaag atgaagatgg attaaaaatt
     1681 attggttttt ccaagtcgaa aaccaacggg gttaaaaaag gtgccattac caatatagag
     1741 cttgcttcta aatctattga agaggctgtt agaagtgctg agatgatgag cggagttcat
     1801 tatgataggg ttgtggtgtc tatatcaggt gcttatacta aaagcgttga tagcataggt
     1861 gttgttaata ttccaaatca tgaaataggc attaaagaaa ttcatcgtgc tgtaagtaca
     1921 gctaagcata ctgccaatct accaagtggt tatgaaatta tccatgtttt gccttataat
     1981 tttaaggtta atgatcttga acatgttgat gatcctttgg gaatgagtgg caatcgttta
     2041 gaagtttcaa cccatatagt gatttcacaa gaatctcata ttaaaaatct taagaaagcg
     2101 gttgaattag ctgatttaag agtggataat atagttcttt caggatatgc ttcagctata
     2161 gcttgtttag atgatagcga aaaggaatta ggtgctgttt tgattgatat gggtggagcg
     2221 atttgtgata tggttgttca tactggaaat tcaattagat ataatgattg tttgcaaatt
     2281 ggctcgatta atatcactca agatttatca atggcattgc atacaccttt aaaagaagca
     2341 gaaaaaatca agcttaatta tgcagctctt tcacaacagc ctaataccct tatacaaatt
     2401 ccttcaatgg gtgatgaaag aaaggttaat gaagtttctt tggatattat ttcaaacgta
     2461 atttatgcaa gagcggaaga aactttgatg attttggcaa aaatcttaag tgataatcgt
     2521 tatgccaatg ctataggtgg cggagttgtt ttaacaggtg gaatgactaa gttagcaggt
     2581 attgatgagc tagctcctgc aacatttgat aatcgctcag ttagactggc tactgcaaga
     2641 aaagatttga ttactggttt tagtgaaatt tttaatgatc ctgaaaatac ttgtgctata
     2701 ggactttgtt tatatggagc gggatatttt acgccttatg aacttgattc taatgagaaa
     2761 ttaagatata aaggggaaat tgaaaatttt aatcgtcaaa ttaaacaaga tattgttttg
     2821 caaaaagata cagaaagtga aataaaatct gatttttttg atgaaaattt gcaagaaaat
     2881 gatacaattg caatacaaga acaattagat tttaaagagc caaaagaaaa aaaacctagt
     2941 gttttttcaa atatctggca taaaattatg aatcaatttt aacaaggaga aatttttatg
     3001 agtgaatttt tagtagaaga aatgcaacat aataaaggtg caaaaattaa ggttataggc
     3061 tgcggtggcg gtggcggtaa tatgattaac catatggtta aaatgggatt aaatgatctt
     3121 gatttaattg cagcgaatac tgatgcacaa gctatttcaa tttcattagc aaaaactaaa
     3181 attcaacttg gcgagaaaaa aactaaaggt ttgggcgctg gtatgcttcc tgaagtaggt
     3241 gcagaaagtg ctagagaaag ttttgaagaa ataaaagcaa gtcttagtca aagtgatatt
     3301 gtatttattg cttcaggttt tggtggaggt actggaacgg gtgccactcc agttattgca
     3361 caagcagcta aagagattgg agctttaact gtttctgttg taactatgcc ttttgcattc
     3421 gaaggaaaac aaagaaaaaa acttgctgaa agcggtctcc ttgagcttaa aaaagaaagt
     3481 gattctattc ttgtaattca aaatgaaaaa ttattgagca ttattgataa aaaagcaggt
     3541 attaaagatg cttttaggtt ggttgatgat attttagctc gtgctgtaaa aggtatggtg
     3601 tctatcttac ttgataatgg agatattaat gttgactttg cggatgtaag aaccatcatg
     3661 agtcatcgcg gactcgcgct tatgggtgtt ggtagtgcta gcggtgaaaa tgctatagaa
     3721 gaggctcttt caaacgctat agaatctcct ttgcttgatg gaatggatat taaaggtgcc
     3781 aagggagtta ttttacattt taaaacaagt tctaattgct ctttgtttga aatttcggca
     3841 gcagcaaata gtatacaaga aattgttgat gaaaatgcta agattatttt tggttctact
     3901 acagatgata gcatggaaga tagagttgaa gtaactatta ttgcgacagg gtttgaagat
     3961 aaagatacag tagctaaaaa atctaccgaa gaagctcaag cttctaagaa aaatccttat
     4021 ttaagtctta aaaaggtaag cggtggttac gatgaagaga taatggcgca aattgaaaca
     4081 ccaactttct tgcgtcgtca aatggattaa aattgatttt taaagcaaga ttgagtcaaa
     4141 tcttgctttt tatagtttaa aattctctcc taataatctt tcaaatattt atttttcttt
     4201 gtttttaaaa gttggaacac tctttgcttt tatagttata aaatcttaaa tttataggtg
     4261 aaaatatgca aaatggatat tatcaagcaa ctggcggaat ggtaactcag tttaataaac
     4321 ttgatgtgat tactaataat cttgccaata ttaatacaag cggatacaaa agagatgatg
     4381 tggttattgc agattttaaa aggattttta aagaaactca ggatgagttg cctatagaaa
     4441 atcacacaag agatgcatct cgttttgtaa atactacaat agatggaatc ccacaagttt
     4501 ctcaagaata tacggatttt agcctaggtt ctttaaaggc cacaaacaat cctttggatt
     4561 tggcaatgac tagagaagat gctttttatt tggttcagac caaagatgga gaagtaagat
     4621 taaccaaaga tggaaatttt caacttgatg atgagggtta tttggtaaat aagcaaggat
     4681 acaaggtatt aagtagtgat tattttaata atcctcagaa tgctggcata cgcattccta
     4741 atggtgctgt tcaaattagc gttgataaaa acggaagcat tgaagttgat ggagctcaaa
     4801 atgcaagatt atttgtagca caagtagatg atataagagc tttgcaaaaa gatggggata
     4861 atgtctataa aatagatgat ctaacccgta ttagagattt gaaaaactcc aatgctattc
     4921 gccaaggttt ttctcaggga tcaaatgtta atccagttac tgaaatggta ggactgattg
     4981 aagcaaacag aatggtagaa atgtatcaaa aagttatgac agctcatatg gatgacttaa
     5041 atcaagaagc tatcaataag cttgcagctg ttaaataatt taaaataaaa taaaaaagga
     5101 ttaaaaatga tgagatcact tcatactgct gctacaggaa tggtagcgca gcaaacacaa
     5161 attgatgtta cttcaaataa catcgccaat gttaatacag caggttttaa gaaaagtcgc
     5221 gcagaatttg ctgatcttat gtatcaagtt atgaagtatg caggaacttc aacttcagct
     5281 actactcttt ctccttcggg tatagaagtg ggtgtgggtg tgcgtccaac agcggtaact
     5341 aaagttttta ctgaaggaaa tttaaaatca acaagtactg atggtcttga tatggctatt
     5401 gcaggtaatg ggttttttca aatacaactt cctgatggca ctataggata tactagaaat
     5461 gggcaattta caaaagataa tgaaggtaat attgtaaatt cagatggtta tagactttta
     5521 cctgaaatga caatacctga aggcgcaaca gcaattaatg ttgctacaga tggaaccgtt
     5581 tctgtaatgc taccagggga gcaacaagaa actcaaattg gccaagtgga gctagttcag
     5641 tttataaatc cagcgggtct tcattctatg ggtgataatc tttatcttga aacaggagca
     5701 agtggtgcac ctgttgcggg tatagcagga caagatgggc ttggaacaat aagacatgga
     5761 tttatagaac ttagtaatgt tcagcttgtt gaagaaatga cagatcttat cacaggacaa
     5821 agagcttatg aagcgggttc taaggccatt acaacaagtg atgatatgct aggaattgta
     5881 aatcagctta agcgatagtt gatataaaat aaataatttt taattctttt ttgtttaatg
     5941 gcgtgttaaa cgccattaaa ttttttagca agagtagcaa gttttaaatt cataagcagt
     6001 tggacgagct tctactggcc aaacttgtgt ttcaaatttt aaatgctgat agtcatcgat
     6061 aaaaatatcg ctcattacag gttttaaata agaattatgt cggattaaag cttccaaact
     6121 tcctcttaga gtatgtggta attgctctat ccctttttca cgtatttcat ccaaagtaag
     6181 atcaaataaa ttttcatcca taggacccac aggaatggtt ttatttttga ttccatcaag
     6241 acctgccatt aaaagactaa caaaagctaa ataaggatta gcagtgctat cagggaagcg
     6301 aatttctata cgagctgaat ttttacctat gccataagga acgcgacaac ttgctgatct
     6361 gttttggcaa gaataagtta aaatacaagg agcttcaaag ccaggaacta ttcttttgta
     6421 agagttggaa cttggatttg taaaagctgc aacacttcta gcatttttta aaattccacc
     6481 tatataattt atagcagttt gactaagtcc actgtatcca tctttatcgt aaaataaatt
     6541 tactccattt ttccataagc tcatatgaac atgcatacca ttgccattat ctccgtataa
     6601 aggttttggc ataaaagtgg cagttttgcc atttaaatga gctaccattt ttacaacata
     6661 tttataaatt tgaacattgt cagctgcttc tacaagcgtg ccaaaattta ctcctatttc
     6721 agcttgtcct tgtgcaactt catgatgatg aacaaaagtt ttaagaccta ctttttcaag
     6781 ggtttgaacc atttcagaac gaatatctac taaagaatca attggctgaa ctggaaaata
     6841 tccacctttg tttcttggcc tgtgtccagt attgtagcta tcggtaaatt ctctatcatc
     6901 attccactct ccttcttcgg tatcaacttc atacttagaa caatgagtag tatcaactat
     6961 ttttacacta tcaaaaacaa agaattcatt ttctggtcca aagtaagcag tatcagctat
     7021 gccactattt ttaaggtgtt ctattgcttt ttttgctatg cttcttggac atttttcata
     7081 catttgtcct ttgtaaatat catacacatc acaaaatact atgatagtag gatcagccgt
     7141 aaaaggatct aaaaaagcac tttgagcatc aggttttaaa atcatatctg atttttctat
     7201 aggttgccat ccatgaattg agcttccatc aaatggaatg ccagtttgaa atgtttcttc
     7261 attgattgca tgaagattat aggtaatatg atgccaagtt cctatcatat ctgtaaaacg
     7321 aaaatcaaca aaaagcactt cattttgttt gcaaaatttg aaaaaatcat ctatattatt
     7381 aacaaatttt cccatatttt t
//
LOCUS       DAPIYB010000078         7392 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.079, whole genome shotgun sequence.
ACCESSION   DAPIYB010000078 DAPIYB010000000
VERSION     DAPIYB010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7392
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.079"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..559)
                     /locus_tag="RJ318_001413"
     CDS             complement(<1..559)
                     /locus_tag="RJ318_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDV7431266.1"
                     /translation="MLKVCNLSKFYELKKHWYLKKERHIIFDNVNFSLNENDNLIILG
                     KSGAGKSTLARILCFLEDPSEGEVWYENLNLHKLDKNKQRLLRKQIQYCFQDQKMALN
                     PYKKIKNLIQDGLENFNLQKNDDLILEFFDFFSLKKQILEQKSYELSGGEATRVGLIR
                     ALVLNPKLLILDEITSAFDIKTSKEI"
     gene            complement(552..1262)
                     /locus_tag="RJ318_001414"
     CDS             complement(552..1262)
                     /locus_tag="RJ318_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7431267.1"
                     /translation="MKVRNLNISSKNNLLLKDINLDIKTGKTLMILGQSGVGKSLLGK
                     ALVRLLDSNFTISFDELSFHNSCIFNFNKEELRNFRSKVALVLQDAELSLYPYLDIGN
                     LCHLVLKTHTKLKQKERKDYAFSYFQKLGFENLDRLWHSYANELSLGMARRVSLALAL
                     LNQPQILICDEITASLDKENASKIISILKELKNTTALVCITHDLNLVNSLADEILMLE
                     KNSSNLYSLNEFLRYYNA"
     gene            complement(1259..2053)
                     /locus_tag="RJ318_001415"
     CDS             complement(1259..2053)
                     /locus_tag="RJ318_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7431268.1"
                     /translation="MILFKFLIILAPLIFLFLCALFAPFLALFDILSTHLENLHQAPN
                     FTYILGTDFLGRDLFSRLLFALRNSLIIGVGGSLLSIIFALCYLFLARCFFYVFCMRI
                     LEFFLALPAFLLMMFFQSMITSDVFLMIFLIALIHWCFIARIIESELKRLENLDFYKA
                     NIVLGRTKFRAFFKDLIPALKTLIFTLFIFNIVHAIATEATLSFFGLGLGFEIPTLGT
                     LLSESSKAVFIGAWWMILFPLLSLLLLFLPLLWLGNFLQKIWGIRS"
     gene            complement(2040..2984)
                     /locus_tag="RJ318_001416"
     CDS             complement(2040..2984)
                     /locus_tag="RJ318_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7431269.1"
                     /translation="MLKRLVFSIFIAFFSTFLCFVLLHFSKGSIAYANGVNSQSKEFV
                     QRIEQNLGLDKPLLEQYKIWLFKALKGDLGVSFLSGESVLKLIKERIFNTFILGFSAL
                     MLLFLLSVFLALLGYYYKESFIDKIITFLAFNFFALPPFVLALLFVLIFGIFWKILPV
                     MGSSDIGFEDDFLNRLEHLILPVLVLVLSHLALFLRIARNFINESFSQIFIQNLYARA
                     LREKDIYFLVLKYSLSPIVAYFGGSALSFMMGTYVVESVFAYKGLGSLLFKSIIFKDY
                     PIVLALIFFSVLLAAFFTFLSDIVARILNPRLRRLDFV"
     gene            complement(2984..4519)
                     /locus_tag="RJ318_001417"
     CDS             complement(2984..4519)
                     /locus_tag="RJ318_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDV7431270.1"
                     /translation="MLRWFVLLFLLFLNLEAKIPKDTLIIAVENEIARINPAYSEDHD
                     AVINLVFSGLTRFDENMSLKPDLAKSWDISKDGLVYDIFLRDDVLWHDGVKFSADDVK
                     FSIEAFKNPKNNSSIYVNFEDIKSVEILNPSHVKITLFKPYPAFLDALSIGMLPKHLL
                     ENENLNTSSFNQNPIGTGPYKFVKWKKGEYVEFKANEHFYLDKVKTPRLIIKHIFDPS
                     IASAELKNGKIDAALIDVSLLNIFKNDENFGILREKSADYRALMFNLDNEFLKDLKVR
                     QALNYAVDKESIVKNLLHDYAFVANHPLERSWANSKNFKIYKYDPKKAEDLLVSAGFK
                     KNKDGNFEKDGKILEFEIWAMSNDPLRVSLAGILQSEFRKIGVVSKVVAKPAGSFDYS
                     KVDSFLIGWGSPLDPDFHTFRVFESSQDSALNDEGWNFGHYHDKKVDIALQKARNTSN
                     LEERKKYYKDFIDALYENPPFIFLAYLDFALVYNKDLKGIKTRTLGHHGVGFTWNVYE
                     WSK"
     gene            complement(4629..7361)
                     /locus_tag="RJ318_001418"
     CDS             complement(4629..7361)
                     /locus_tag="RJ318_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000392313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDV7431271.1"
                     /translation="MFKDRIFNDYARCYAYGIDASCYFYIPKIVIIAKNEDEIKQIIQ
                     LANTYKTPITFRAAGTSLSGQSSCDGVLVVIKFAFKKIKINKDANEITLGCGVVGIHA
                     NESLAFLKKKIGPDPATINSALIGGIINNNSSGMCCGTKDNSYKTLRSIRVILANGSM
                     LDTSDALSVARFKDENKKLINELREIKEEINANKELKDLIIKKFKIKNTTGYSLNAFV
                     DYDDEIDILAHLLIGSEGTLGFVSEVKLAVLDDLEFKACALLFFDNINNAANTIKEFA
                     KVDFVSSAEIMDYASLKAASTYDELRDILADIKEGNTCVLIQSEHSNELKLDENINKI
                     KEISKLAYKSYFSKNKAEYDLWWKIRKALLPIAASLRKAGSTVITEDVCFNIEDLADG
                     IKSIQELFYKYGFGDNGIIFGHALAGNIHFIITPDLNNKLEFDNFSNLVKEMSNIVAS
                     YGGSIKAEHGTGRMVAPFVEVEWGKQAYLINKKIKSIFDKDSLFNPDVIISDDKDIYK
                     KNIKQVSWIDEKLNTCMECGFCERFCPSNEYTITPRQRIAILREIKRLESLNDDESKA
                     KLKDIKKYYNHLVDSSCAACGVCSFSCPLGINFADFSLKYRKNNIGFISKILGNLAYK
                     NHEKTLKIAKFSLSIANKFDNLSLDNKLEKASNFLSIIPRTRAYLPKVNDYELKSHKR
                     VCNVVYFTSCLNKSFKPNEKMHDKRSLQEVFESLCKKANIGIIYAPNDLCCGKAYENF
                     QDIQDKNIQKINDFLSNIDSPIVLDHSACSAKLISDHSKYEIYDLSEYLLKFIAPKLR
                     IDKINENVGLYIMCAARKLGLNENIIKLTKLCTNGKVLIDNDTYCCGFAGYKGFFKPQ
                     LNISATKGFKKFYAKTNIKRGFSTSSTCEIGLSDATGISWQHIAYLLDECSEAI"
BASE COUNT         2734 a         1333 c          817 g         2508 t
ORIGIN      
        1 aaatttcttt agaagtttta atatcaaacg ctgaagtaat ttcatctaaa atcaacaatt
       61 taggatttaa aaccaaagca cggataagac ctacacgtgt ggcttctcct ccgcttaact
      121 cataggattt ttgttctaaa atttgttttt ttagactaaa aaaatcaaaa aattctaaaa
      181 tcaagtcatc attcttttgt aaattaaaat tttccaaacc atcttgtata agatttttga
      241 tttttttata agggtttaaa gccatttttt gatcttgaaa gcaatattga atttgctttc
      301 ttaaaagtct ttgtttgttt ttatcaagct tgtgtaagtt aagattttca taccatacct
      361 caccctcact tggatcttct aaaaaacaaa gaattctagc taatgtgctt ttacctgcac
      421 cacttttacc taaaattatt aaattgtcat tttcatttaa agaaaaattg acattatcaa
      481 aaataatatg tctttctttt tttaaatacc aatgcttttt aagctcataa aacttactta
      541 aattacaaac tttaagcatt ataatacctt aaaaactcat ttaagctata taaatttgaa
      601 ctattttttt ctagcataag aatttcatct gctaaagaat ttaccaaatt taaatcatga
      661 gtgatgcaaa ctaaggctgt agtatttttt aattctttta aaatcgatat aatcttagaa
      721 gcgttttctt tatccaaaga agctgtgatt tcatcacaaa ttaaaatttg gggttgattt
      781 aataatgcca aagctaggct cacccttctt gccataccca aacttaattc attagcataa
      841 gaatgccaca aacgatcaag attttcaaat cctaattttt gaaaataaga aaaagcgtaa
      901 tcttttcttt ctttttgttt taattttgta tgagttttta aaacaagatg acataaattt
      961 ccaatatcca aataaggata aagactaagc tctgcatctt gcaaaacaag tgccacctta
     1021 gaacgaaaat ttctaagttc ttctttatta aaattaaaaa tacaagaatt atgaaaactt
     1081 aattcatcaa aacttattgt gaaattagaa tctaaaagtc ttaccaaagc ttttcctaac
     1141 aaacttttgc ccactccact ttgtcctagt atcattaaag ttttacctgt ttttatatct
     1201 aaattaatat ccttaagcaa taaattattt ttcgaactaa tatttaaatt tcttaccttc
     1261 aagatcttat accccaaatt ttttgtaaaa aattacccaa ccataaaaga ggtaaaaaca
     1321 acaaaagcaa gcttaaaagt ggaaaaagta tcatccacca agcgcctata aaaactgctt
     1381 ttgaagattc actcaaaaga gtacctaaag ttggaatttc aaatcctaaa cccagcccaa
     1441 aaaaactcaa agtagcttct gtggctatag catgaacgat attaaatata aaaagtgtaa
     1501 aaatcagtgt ttttaaagca ggtattaaat ctttaaaaaa agctctaaat ttagttcttc
     1561 caagcactat atttgctttg taaaaatcta aattttcaag tctttttaat tcactttcta
     1621 taattcttgc tatgaaacac caatgaatta aagcgattaa aaaaatcatc aaaaacacat
     1681 cagaagttat catactttga aaaaacatca taagtaaaaa agcaggcaag gctaaaaaaa
     1741 actctaaaat acgcatacaa aaaacataaa aaaaacatcg cgctaaaaac aaatagcaca
     1801 aagcaaagat aatagacaat aaagatccac caacacctat aatcaaagaa tttctcaaag
     1861 caaaaagcaa acgagaaaac aaatctctgc ctaaaaaatc agtccctaaa atataagtaa
     1921 aattaggagc ttgatgcaaa ttttctaaat gagtgcttaa aatatcaaaa agagccaaaa
     1981 aaggtgcaaa caaggcgcat aaaaacaaaa aaattaaagg cgcaagaatg ataagaaatt
     2041 taaacaaaat caagccttct taatctagga tttaaaatcc tagctacaat atcacttaaa
     2101 aatgtaaaaa atgctgcaag caaaacacta aaaaatataa gcgcaagcac aataggataa
     2161 tctttaaaaa taatactttt aaaaagtaaa gatccaagcc ccttgtaagc aaagacactt
     2221 tctaccacat aagttcccat cataaaactt aaagcacttc ccccaaaata agccacaata
     2281 ggacttaaag aatatttcaa aactaaaaaa taaatatctt tctcccttaa agccctagcg
     2341 tataaatttt gaataaaaat ttgagaaaaa ctttcattga taaaatttct agcaatcctt
     2401 aaaaataacg ccaaatgtga taaaacgagc accaaaacag gcaaaatcaa atgctctaaa
     2461 cgatttaaaa aatcatcttc aaagcctata tcactacttc ccataacagg caaaattttc
     2521 caaaaaattc caaaaatcaa aacaaacaat aaagccaaaa caaaaggagg taaagcaaaa
     2581 aaattaaaag ctaaaaaagt gatgatttta tctataaaac tttctttata ataatatccc
     2641 aaaagtgcca aaaaaacact gagcaaaaat aaaagcatta aggcactaaa acccaaaata
     2701 aaagtattaa aaattctttc ttttataagc tttaaaacac tttctccact taaaaaagaa
     2761 acccctaagt ccccttttaa agccttaaaa agccaaattt tatactgctc tagcaaaggc
     2821 ttatcaagcc ctaaattttg ttctattctt tgaacaaatt ctttactttg tgaattaact
     2881 ccattagcat aagctatact gcctttacta aaatgaagta aaacaaaaca taaaaaagtg
     2941 ctaaaaaatg ctatgaaaat actaaaaact aagcgtttta gcactattta ctccactcat
     3001 aaacattcca agtaaaaccc actccatgat gacctaaagt ccttgttttg atacctttta
     3061 aatctttatt ataaactaaa gcaaaatcaa gataggctaa gaaaataaaa ggaggatttt
     3121 catacaaagc atctataaaa tctttataat atttttttct ctcttctaaa tttgaagtat
     3181 ttcttgcttt ttgcaaggct atatccactt ttttatcatg ataatgtcca aaattccaac
     3241 cctcatcatt taaagcacta tcttgcgaac tttcaaatac cctaaaagtg tgaaaatcag
     3301 gatctaaagg acttccccag cctattaaaa aactatctac tttagaataa tcaaaacttc
     3361 cagcaggttt agccaccacc ttgcttacaa ctcctatttt tctaaattcg ctttgcaaaa
     3421 ttccagctaa acttaccctt aaaggatcat tgctcatcgc ccaaatttca aattctaaaa
     3481 ttttcccatc tttttcaaaa tttccatctt tatttttctt aaaacctgca ctcacaagca
     3541 aatcctcggc ttttttagga tcatatttgt aaattttaaa attcttagaa tttgcccaag
     3601 aacgctctaa agggtgatta gctacaaaag cataatcatg taaaagattt tttactatac
     3661 tttctttatc gactgcgtaa tttaaagctt gtcttacttt tagatctttt aaaaattcat
     3721 tatctaaatt aaacattaaa gcccgataat cagccgattt ttcacgcaaa attccaaaat
     3781 tttcatcatt tttaaaaata tttagcaaag aaacatcgat taaagctgcg tctatcttgc
     3841 catttttaag ctcagcacta gctatagaag gatcaaaaat gtgttttata ataagtcttg
     3901 gagtttttac cttatcaaga taaaaatgtt cattggcttt aaattcaaca tattcacctt
     3961 ttttccattt tacaaattta taaggacctg tacctatagg attttgatta aaagagcttg
     4021 tgtttaaatt ctcattttca agcaaatgtt taggaagcat tcctatgctt aaagcatcta
     4081 aaaatgcagg ataaggttta aagagtgtga tttttacatg agaaggattt aaaatttcca
     4141 cacttttaat gtcttcaaaa ttgacataaa tagaagaatt gtttttagga tttttaaagg
     4201 cttctatact aaatttcaca tcatcagcac taaatttgac tccatcatgc cataaaacat
     4261 catctcttaa aaaaatatca taaacaagcc cgtctttact aatatcccaa gacttagcca
     4321 aatcaggttt taaactcata ttttcatcaa aacgcgtaag ccctgaaaat acaagattaa
     4381 tcactgcatc atgatcctcg ctataagcag gatttatcct tgcgatttca ttttcaactg
     4441 ctataataag tgtatctttt ggaattttag cctcaagatt caaaaacaat aaaaatagta
     4501 aaacaaacca tctaagcact tgtaactcct caaatttaaa attttaaaga attataaaat
     4561 aaaaaataag aagccacaag ctctatgggg ggataatttg ctttaaatta tggagtttta
     4621 tttatcaatt aaattgcttc actgcattca tccaataaat acgctatatg ctgccaagat
     4681 atacccgtag catcgcttaa tcctatctcg caagtgcttg atgtactaaa cccgcgctta
     4741 atatttgttt tggcataaaa ttttttaaag ccttttgtag cactaatatt taattgaggc
     4801 ttgaaaaagc ccttgtatcc agcaaaccca caacaatagg tatcattatc tattaatact
     4861 tttccattcg tacatagctt tgtaagctta attatatttt catttaaacc aagctttcta
     4921 gcagcacaca tgatatataa tcctacattc tcattgattt tatcaatgcg taacttggga
     4981 gcaataaatt ttaataaata ctcgcttaaa tcataaattt cgtactttga atgatcacta
     5041 attaacttag cactacaagc actatgatct aacactatgg gtgagtctat attgcttaaa
     5101 aagtcattga ttttttgtat atttttatct tgaatatctt gaaaattctc ataagcctta
     5161 ccacaacata aatcattggg tgcataaata atgcctatat ttgctttttt acacaagctt
     5221 tcaaatactt cttgcaaact tcttttatca tgcatttttt catttggttt aaagctttta
     5281 ttaagacagc ttgtaaaata aaccacattg caaactcttt tatgactttt tagctcataa
     5341 tcattcacct taggcaaata cgccctagtt cttggtataa tgctaagaaa attgcttgct
     5401 ttttcaagct tattatcaag acttaaatta tcaaatttat ttgcgatact taatgaaaat
     5461 ttagcaattt ttagagtttt ttcatgattt ttatatgcta gatttcctaa aattttagat
     5521 ataaatccta tattattttt tctatatttt aatgaaaaat cagcaaaatt aatccccaaa
     5581 ggacatgaaa aagagcacac cccacaagca gcacaagagc tgtctactaa atgattgtaa
     5641 tattttttaa tatcctttaa ttttgctttt gactcatcat catttaagct ttcaaggcgt
     5701 ttaatctctc gtaagatcgc aattctttgt cttggagtaa ttgtatattc atttgatgga
     5761 caaaatcttt cgcaaaatcc acattccata caggtattta atttctcatc aatccaactg
     5821 acttgtttga tatttttctt ataaatatct ttatcatcgc taatgattac atcgggatta
     5881 aataaactat ccttatcaaa gatacttttg atttttttat tgatcaaata agcttgctta
     5941 ccccactcta cctccacaaa aggtgccacc atacgccctg tgccgtgttc agcttttata
     6001 cttccaccat aagaagctac tatattagac atttctttaa ctagatttga aaaattatca
     6061 aattcaagct tattgtttaa atccggtgtg ataataaaat ggatattgcc tgctaatgca
     6121 tggccaaaaa tgattccatt atcaccaaag ccatatttat aaaacaattc ttgaatgctt
     6181 ttaattccat cggctaaatc ctcgatatta aaacacacat cttcagtaat taccgttgaa
     6241 cctgcctttc taagactagc tgctataggc aagagtgctt ttctaatctt ccaccataaa
     6301 tcatattcgg ccttattctt gctaaaatat gacttataag ccagtttgga aatttctttt
     6361 attttattta tattttcatc aagcttaagc tcattactat gctcactttg gatcaataca
     6421 caagtattgc cctctttaat atcagctaaa atatctctta actcatcata agttgatgca
     6481 gcttttaaac ttgcatagtc cattatttca gcagaactta caaaatcaac tttagcaaat
     6541 tcttttatag tgtttgcagc attattgata ttatcaaaaa acaataaagc acaggcctta
     6601 aattccaaat catccaaaac agcaagctta acttcgctta caaatcccaa agtcccttca
     6661 gagccaataa gcaagtgtgc taaaatatct atttcatcat cataatcaac aaaggcatta
     6721 aggctataac ctgtggtgtt tttgatttta aattttttga ttattaaatc ttttaattct
     6781 ttattggcat taatctcttc tttgatctct ctaagttcat taattaattt tttattttca
     6841 tctttaaatc gagccacact taaagcatcg ctggtatcaa gcatactacc atttgccaaa
     6901 atcaccctaa tacttcttaa ggttttatag ctattatcct tagttccaca gcacattccg
     6961 cttgaattgt tatttataat ccctccaatt aaagctgaat ttatagtagc tggatcaggt
     7021 cctatttttt tcttcaaaaa agcaagactt tcattagcat gaatgcctac tacaccgcat
     7081 cctaaagtaa tttcgttagc gtctttgtta atttttattt ttttaaaggc aaatttaatc
     7141 actacaagta ctccatcaca agagctttgt ccacttaaac ttgtacctgc tgctctaaat
     7201 gttataggag ttttataagt atttgctaat tgaataattt gcttaatttc atcttcattt
     7261 ttagcaataa tcactatttt tggaatataa aaataacacg acgcatcaat gccataagca
     7321 tagcatctag cataatcatt aaaaattcta tccttaaaaa tatacttagc ctctttataa
     7381 aaagctttaa aa
//
LOCUS       DAPIYB010000079         7248 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.080, whole genome shotgun sequence.
ACCESSION   DAPIYB010000079 DAPIYB010000000
VERSION     DAPIYB010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7248)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7248)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7248
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.080"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..551
                     /locus_tag="RJ318_001419"
     CDS             <1..551
                     /locus_tag="RJ318_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431272.1"
                     /translation="LSSCLLASALSAVSFKEDSLKISFEGYKTKDMIGTKGEFKNVEY
                     KFSKNIKDLASYLKGAKATIKPSNAFMGEGNDIITNNITKVFFPALLGDTDIKVVFQD
                     VIAGENKGVISAKITMDKKSTIVPLTYTIKDNKFEAKGQLDLHTFKNGSKALKALSDV
                     AAGHGGISWPLVDISFNADLAE"
     gene            complement(567..1133)
                     /gene="rsmG"
                     /locus_tag="RJ318_001420"
     CDS             complement(567..1133)
                     /gene="rsmG"
                     /locus_tag="RJ318_001420"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDV7431273.1"
                     /translation="MIFKDYDFLQNYDLKNFEEKVKIYKELLSKFNRIHNLTHLKNID
                     ENIFDSIKILDFYDFSKAKNIADIGSGAGFPVVFLAFLLQSNFHLFEPNPKKAAFLRT
                     LKIECELPNLHIYKEKVQEYKNTFKADIITSRALMDVKPLLEICKNLKDENTVFILWK
                     GSEIYQELENIKDYEIFENNLRRYCILK"
     gene            complement(1134..1694)
                     /gene="ribA"
                     /locus_tag="RJ318_001421"
     CDS             complement(1134..1694)
                     /gene="ribA"
                     /locus_tag="RJ318_001421"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HDV7431274.1"
                     /translation="MEIKISEIANLPSKWGNFQMQSFKENDKEHLCIFKNTPKDTLNL
                     RIHSECLTGDALGSLKCDCGEQLEFSLKYIEKNGGMVIYLRQEGRGIGLFNKVNAYAL
                     QDKGFDTIKANHQLGFKADERTYEIVEFILKHYEISKVNLLTNNPEKLDSIKEKIITR
                     IPILIEPNRFNVEYLNIKQTQMGHLK"
     gene            1752..2735
                     /gene="hemB"
                     /locus_tag="RJ318_001422"
     CDS             1752..2735
                     /gene="hemB"
                     /locus_tag="RJ318_001422"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDV7431275.1"
                     /translation="MFKRFRRLRLNENLRSMVRENSLSVNDLIYPLFVVNGTGIKKEI
                     SSMPDVFQMSLDEILKECQNVVNLGIKAIILFGVLENEKKDSCGSDALDDEGLVARSI
                     REIKKNFPDLFIISDLCFCEYTDHGHCGIIDPKIKSVDNDATLEISAKQALVHARAGV
                     DMIAPSGMMDGVITTLRKALDKEGFENLPIMAYSTKFASSYYGPFRDVAESAPSYGDR
                     KSYQMDFANGKEALEESLEDEAQGADILMVKPALAYLDVVKEISLHSNLPLCIYNVSG
                     EYAMLKAAKNAGVIDYEKVLYETIIAFKRAGAKLIITYHAKELAKMLKGEK"
     gene            2732..3652
                     /gene="argF"
                     /locus_tag="RJ318_001423"
     CDS             2732..3652
                     /gene="argF"
                     /locus_tag="RJ318_001423"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDV7431276.1"
                     /translation="MKHFLTLRDFSKEEILSLVNHASELKKEPKKLLQDKTLAMIFEK
                     NSTRTRMAFELAITELGGKALFLSSNDLQLSRGEPVKDTARVIGAMVDFVMMRVNKHE
                     TLLEFARYSKAPVINALSELYHPTQVLGDLFTIKEWNKMQNGIAKVAFIGDSNNMCNS
                     WLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVI
                     TDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEEIFEK
                     HADVIFEEARNRLYVVKALLCFLDNQRGRE"
     gene            3649..4140
                     /locus_tag="RJ318_001424"
     CDS             3649..4140
                     /locus_tag="RJ318_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2603 domain-containing protein"
                     /protein_id="HDV7431277.1"
                     /translation="MKELEKYSTCLKRIDEFSQNLGIKKKDRTIFKMKQSENENEKCL
                     VLENGSFDSPEPWFVIDENDEIHTLLSLQSLKNILESLKQSQKENFELRLEKAIYQQI
                     PVDFNDVWTVAMDEIKQKAQNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNQN
                     ERL"
     gene            4127..5482
                     /gene="hemN"
                     /locus_tag="RJ318_001425"
     CDS             4127..5482
                     /gene="hemN"
                     /locus_tag="RJ318_001425"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDV7431278.1"
                     /translation="MRDYKAFVKYSKAGPRYTSYPTAVEFNANFKYEEYIEILKKQDR
                     SLSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQM
                     HFGGGTPTFFSAKQLQSLILKIRSVFGNFSKDAEISCEIDPRFLNEEQAIVLTQNGFN
                     RISFGVQDFDEKVQKEIHRIQSFELTQNALNLVRNKGIKSVNMDLIYGLPYQNLQSFT
                     QTLEKVMLLNPDRLAIFNYAHVPWLKKNMRKFDENTLPSPDVKLEILEFCEKFLSKNG
                     YKMIGMDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIGEGQRHYAQN
                     FKDMSSYEAALDRGVLPFERGVILSDDDELRKAVIMELMANFKLDIKSIEKEFSIDFK
                     EYFKEDLKALEEYKDFVNFDENFIKVNETGVLLIRNIAMCFDAYMKNISEDKKVFSKT
                     V"
     gene            5484..6749
                     /locus_tag="RJ318_001426"
     CDS             5484..6749
                     /locus_tag="RJ318_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDV7431279.1"
                     /translation="MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLTAYK
                     EGSLELDKEAKKVFESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKKFGIAWYKKLIF
                     FFLRRRKILDLVAKLGYVFQSCAFKIQNENENTGMKARFSMPFVKKGRLLTSFNKKSF
                     LNSNPKFINNDGEKTIGFFVGCLANYFYIDTANAVLKITKELKINVDLMKEQVCCGAP
                     QFFTGDFKSVEVLAKKNIEYFEKKLEKLDAIIVPEATCSAMLKIDYEHFFIMQNDLDW
                     AKRAKCVSSKIYMASEYFYKFTSLEEILKTKNKFNYSITYHDPCHARKMQGVFKEPRE
                     LLKTNYHFVEMSNSNTCCGFGGVSMQTDYYDRALSVGLKKAQMIDESKASVVSAECSA
                     CRMQISNALEQNSSKVVFASPLELIAKAL"
     gene            6746..>7248
                     /locus_tag="RJ318_001427"
     CDS             6746..>7248
                     /locus_tag="RJ318_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431280.1"
                     /translation="MMMKIVFKGKSSEYEIQRSCFCVDAFVIKDKIEERDGVDFITSN
                     VDLLEFSDDSFTFEEIVKHFNICDTEDMIIVEDFDMKSNKDNQNQEDDIEHNILKSEK
                     IIHENTKQTSMQFKNLKFFSRIFKNENFLSDFKESKQEVVTIKKHEKLEIFKNLSQED
                     QEISFVK"
BASE COUNT         2604 a          861 c         1343 g         2440 t
ORIGIN      
        1 ttttaagttc ttgcttgtta gcttcggctt taagtgctgt atcttttaaa gaagatagtt
       61 taaagatttc ttttgaagga tataaaacta aagatatgat aggaacaaaa ggtgaattta
      121 aaaatgtaga atataaattt tctaaaaata taaaggattt ggcaagttat cttaaaggcg
      181 ctaaagctac cataaagcca agcaatgctt ttatgggtga aggcaatgat attataacca
      241 ataatatcac aaaagtattt ttccctgctt tattgggaga tacggatatt aaagttgttt
      301 ttcaagatgt gattgcgggt gaaaataaag gcgttatttc agcaaaaatt actatggata
      361 aaaaaagtac tattgtacct ttaacttata ccatcaaaga taataaattt gaagctaaag
      421 gacaacttga tttgcatact tttaaaaatg gttctaaagc attaaaagca ttaagcgatg
      481 ttgctgcagg acatggtgga atttcttggc ctttagtgga tatcagtttt aatgctgatt
      541 tagcagaata aaaagtagcc ttagggctac tttaaaatac aatatcttct taaattattt
      601 tcaaaaattt cataatcttt tatattttca agttcttgat aaatttcact acctttccat
      661 aaaataaaaa ctgtattttc atcttttaga tttttacaaa tttcaagcaa aggcttgaca
      721 tccattaagg ctcttgaagt gatgatatca gctttaaagg tattcttgta ttcttgaact
      781 ttttctttgt aaatatgtaa atttggaagt tcacattcta tttttaatgt ccgcaaaaag
      841 gcagcttttt tgggattggg ttcgaaaaga tgaaaattgc tttgcagtaa aaaagctaaa
      901 aatacaactg gaaatcctgc gccacttcct atatcggcaa tattttttgc tttagaaaaa
      961 tcataaaaat ctaaaatttt aatactatca aagatatttt catctatatt ttttaaatga
     1021 gtaagattgt gaatgcggtt aaatttagat aataattctt tataaatttt taccttttct
     1081 tcaaagtttt ttaaatcgta gttttgcaaa aaatcataat ctttaaaaat catttattta
     1141 agatgtccca tttgagtttg ttttatgttt aaatactcta cattaaaacg attaggttct
     1201 attaaaatcg gtatgcgtgt gatgattttt tctttgatag aatctagctt ttcagggtta
     1261 tttgtgagta aattaacctt agaaatttca tagtgtttga gtataaattc tacaatttca
     1321 taagttctct catcggcttt aaagccaagc tgatgatttg ctttaatcgt atcaaaacct
     1381 ttatcttgta aagcataagc attaaccttg ttaaaaagcc ctatacccct tccttcttgt
     1441 ctaagataaa tcaccattcc gccattcttt tctatatatt ttagcgaaaa ttcaagttgt
     1501 tctccgcagt cgcattttaa acttcctaaa gcatctcctg ttaagcactc tgaatgaatt
     1561 cttagattga gtgtatcttt tggagtgttt ttaaatatgc ataaatgttc tttatcgttt
     1621 tctttgaaac tttgcatttg gaaatttccc catttgctag gtaaattcgc aatttctgaa
     1681 atttttattt ccatttacta ctctctataa tcaaatttat gttaagattt tagcaaaaaa
     1741 aggacaaaaa aatgtttaaa agatttagaa gattaaggct taatgaaaac ttaagatcta
     1801 tggtaaggga aaattcttta agtgtaaatg atttgattta tccgcttttt gtggttaatg
     1861 gaacggggat aaaaaaagaa atttcttcta tgcctgatgt gtttcaaatg agtttagatg
     1921 aaattttaaa agagtgtcaa aatgtagtta atttaggcat taaagccatt atactttttg
     1981 gtgttttaga aaatgagaaa aaagacagtt gtggaagcga tgctttagat gatgaagggc
     2041 ttgttgcaag aagtataaga gagattaaga aaaattttcc agatcttttt ataatcagtg
     2101 atctttgttt ttgcgaatac acagatcacg ggcattgtgg gattatcgat ccaaaaataa
     2161 aaagcgtaga taatgatgca actttagaaa tttcagccaa gcaagcctta gttcatgcaa
     2221 gagcaggggt agatatgata gcacctagtg gaatgatgga tggtgttatc actactttgc
     2281 gcaaagcttt agataaggaa ggttttgaaa atttgcctat aatggcgtat tctactaaat
     2341 ttgcatcaag ttattatggg ccatttcgag atgtagcaga gtcagctcca agttatggag
     2401 atagaaaaag ctatcaaatg gattttgcta atggtaaaga agctttagaa gaaagcttag
     2461 aggatgaagc acaaggagct gatattttaa tggtaaaacc tgctcttgct tatcttgatg
     2521 tggttaaaga aatatctctt cattctaact tgcctttgtg tatttataat gtaagcggag
     2581 agtatgctat gttaaaggca gctaaaaatg caggagtgat tgattatgaa aaagttttgt
     2641 atgaaactat aatagctttt aaaagagcag gggcaaagct tatcatcact tatcatgcta
     2701 aagaattagc taaaatgtta aaaggagaaa aatgaaacat tttttaactt taagagattt
     2761 ttctaaggag gaaattttaa gccttgtaaa tcatgctagc gagcttaaaa aagagcctaa
     2821 aaaactttta caagataaaa ctttagcaat gatttttgag aaaaactcta caagaacaag
     2881 aatggcattt gaattagcca taacagagct tggcggaaag gctttgtttt taagcagcaa
     2941 tgatttacaa cttagtcgtg gtgagcctgt aaaggataca gctagggtga taggggcgat
     3001 ggttgatttt gtgatgatga gggtcaataa acatgaaact ttactcgaat ttgcaagata
     3061 ttctaaagct cctgtgatca atgctttaag cgagctttat catcctactc aggttttagg
     3121 ggatttattt actatcaaag aatggaataa aatgcaaaat ggtatagcaa aagttgcttt
     3181 tatcggagat agtaataata tgtgcaattc ttggcttatt acggctgcga ttttgggctt
     3241 tgaaattagt atagctatgc caaaaaacta taaaattagc cctgaaattt gggaatttgc
     3301 tatgaaacag gctttgattt caggagctaa aatttcctta ggctatgata aatttgaagc
     3361 cttaaaggat aaagatgtag tcattaccga tacttgggtt tccatgggcg aagagaatga
     3421 aaaagaacgc aagattaaag aatttgaagg atttatgatc gatgaaaagg ctatgagcgt
     3481 tgccaataaa gacgcgatat tgcttcattg tttgcctgct tataggggtt atgaagtgag
     3541 tgaagaaatt tttgaaaaac atgcagatgt gatttttgaa gaagcaagaa atcgccttta
     3601 tgtggtaaaa gccttgcttt gctttttgga taatcagaga ggaagagaat gaaagagcta
     3661 gaaaagtata gcacttgctt aaaacgcatt gatgaattta gtcaaaatct aggaataaag
     3721 aaaaaagata gaacgatttt taaaatgaag caaagcgaga atgaaaacga aaaatgttta
     3781 gttcttgaaa atggaagttt tgattctcct gagccttggt ttgtgatcga tgaaaacgat
     3841 gaaattcaca ctttgctttc tttacaaagt cttaagaata tacttgaaag tttaaaacaa
     3901 agtcaaaaag agaattttga attgcgttta gaaaaggcga tttatcaaca aattcctgta
     3961 gattttaacg atgtttggac ggttgctatg gatgagatca agcaaaaggc gcaaaatggt
     4021 accatggaag ttagtattga tcttgaaaaa ttaatttcta aaatcaaaca agagcatcca
     4081 aatttatttg tagatatgca agcgatgata gaaagggtaa accaaaatga gagattataa
     4141 agcttttgta aaatactcta aagcaggacc acgctacact tcttatccta cagcagtaga
     4201 gtttaatgca aatttcaaat acgaagaata tatagaaatt ttaaaaaaac aagatagatc
     4261 tttatcgctt tattttcatt taccattttg taggagtgct tgttattttt gtggttgcaa
     4321 tgtcatctat actgcaaaag aagagagtaa agaaaggtat ttaacttata tttttaaaga
     4381 gcttgatatt ttaagtacca ttttagatac taaaagagaa gtggtgcaaa tgcactttgg
     4441 tggcggaact ccaacttttt ttagcgctaa acaacttcaa agtttgattt taaaaatcag
     4501 atctgttttt ggaaattttt ctaaagatgc agagattagc tgtgagatcg atccgcgttt
     4561 tttaaatgag gaacaagcca tagttttaac gcaaaatggc tttaatcgta ttagctttgg
     4621 agtgcaggat tttgatgaaa aagttcaaaa agaaattcat cgcatccagt cttttgaatt
     4681 aacacaaaat gctttaaatc ttgtaagaaa taaaggcata aagtctgtaa atatggattt
     4741 aatttatggt ttgccttatc aaaatttaca aagctttaca caaactttag aaaaagttat
     4801 gcttttaaac cctgatcgtt tggcgatttt taattacgct catgtgcctt ggcttaagaa
     4861 aaatatgaga aaatttgatg aaaatacctt gccaagtcct gatgttaagc ttgaaatttt
     4921 agaattttgt gagaaatttt taagcaaaaa tggttataaa atgataggaa tggatcattt
     4981 tgcaaaagaa aatgatgagc tttttaaagc tttagaaaat ggaactttac atagaaattt
     5041 ccaaggttat accaccaaag gcggtgctga tttagtcggt gttgggctta caagtatagg
     5101 cgaaggacaa agacattatg cacaaaattt taaagatatg tcaagttatg aagctgcatt
     5161 agatagagga gttttacctt ttgaaagagg tgtgatttta agcgatgatg atgagcttag
     5221 aaaagcagtg attatggagt taatggcaaa ttttaagctt gatattaagt caatagaaaa
     5281 agaattttcc attgatttta aggagtattt taaagaggat ttaaaagctt tagaagaata
     5341 caaagatttt gttaattttg atgaaaattt tatcaaagtc aatgaaacag gtgttttgct
     5401 tataagaaat attgctatgt gttttgatgc ttatatgaaa aacattagtg aagataaaaa
     5461 agtattctca aaaacggtgt aagatgaaat ttagtcaaat aagtgatgct tgcgttaaat
     5521 gtggcaaatg tatacctgtt tgtactatac atgaagaaaa tcgcgatgaa attactagtc
     5581 caagaggatt tttagatctt ttaactgctt ataaagaggg aagtctagag cttgataaag
     5641 aagctaagaa agtttttgaa tcttgttttt tatgcaccaa ttgtgttgaa gtatgtccga
     5701 gtaaattaag agtagataat gccatagaag aagttcgtta tgatatagct aaaaaatttg
     5761 gtatagcttg gtataaaaaa cttatttttt tctttttaag aagacgcaaa attttagatt
     5821 tggtagctaa gcttggctat gtgtttcaaa gttgtgcgtt taaaattcaa aatgagaatg
     5881 aaaatacagg tatgaaggca agattttcca tgccttttgt taaaaaggga agattactta
     5941 caagttttaa taaaaaaagt ttcttaaatt ctaatccaaa atttatcaat aatgatggag
     6001 aaaaaacaat aggttttttt gtaggttgtt tggcgaatta tttttacata gatacggcta
     6061 atgcggtgct taaaatcact aaggaattaa aaatcaatgt ggatttgatg aaagaacaag
     6121 tatgttgtgg agcgccgcaa ttttttacgg gtgattttaa aagtgttgaa gttttggcta
     6181 aaaaaaatat tgagtatttt gaaaaaaaat tagaaaaatt agatgctatt atagttcctg
     6241 aggccacttg ttcggctatg ttaaagatag attatgaaca tttttttata atgcaaaatg
     6301 atttagactg ggcaaaacgc gcaaaatgtg tgtcatctaa gatatatatg gctagcgagt
     6361 atttttataa atttacttct ttggaagaaa ttttaaaaac aaaaaataaa tttaattata
     6421 gcattactta tcacgatcct tgccatgcaa gaaaaatgca aggggttttt aaagagccaa
     6481 gagaactttt aaaaacaaat tatcattttg tagaaatgag taattctaat acttgttgcg
     6541 gttttggcgg ggtgagtatg caaacggatt attatgatag agctttaagt gtagggctta
     6601 aaaaagcaca aatgatcgat gaaagtaagg ctagtgtggt aagtgccgag tgttcagctt
     6661 gtagaatgca aatttcaaat gcattagaac aaaattcaag caaggttgtt tttgctagtc
     6721 ctttagaact tatagcaaaa gctttgtgat gatgaagata gtatttaaag gcaaaagttc
     6781 tgaatatgaa attcaaagat cgtgcttttg tgttgatgct tttgtgatta aagataagat
     6841 tgaagaacga gatggtgttg attttatcac ttcaaatgta gatcttttgg aatttagtga
     6901 tgacagtttt acttttgaag aaattgtaaa acattttaat atttgtgata ctgaagatat
     6961 gattatcgtt gaagattttg acatgaaatc aaacaaagat aatcaaaacc aagaagatga
     7021 tatagaacac aacatcttaa aatccgaaaa aataatacat gaaaacacaa aacaaacaag
     7081 tatgcaattt aaaaatttaa aatttttttc aagaattttt aaaaatgaaa attttctttc
     7141 tgattttaaa gaaagtaagc aagaagttgt tactatcaaa aaacatgaaa aacttgaaat
     7201 ttttaaaaat ttatctcaag aagatcaaga aattagcttt gttaaaat
//
LOCUS       DAPIYB010000080         7158 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.081, whole genome shotgun sequence.
ACCESSION   DAPIYB010000080 DAPIYB010000000
VERSION     DAPIYB010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7158)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7158)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7158
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.081"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..339
                     /locus_tag="RJ318_001428"
     CDS             <1..339
                     /locus_tag="RJ318_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlgG"
                     /protein_id="HDV7431281.1"
                     /translation="KKAAENDPVVSSTKEYLGVSSYYSNIDIANTIKQYYNLFSNALG
                     QSFPNDKTSFSEADINSMPSGYGVSGTQWMDFNEPSNRMNITGLKDFSNSLISNVYKT
                     PEQAKEADEI"
     gene            355..879
                     /locus_tag="RJ318_001429"
     CDS             355..879
                     /locus_tag="RJ318_001429"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431282.1"
                     /translation="MIKGLSSETLGLSLEEIKNVSRGEDWQFNPDMSVYPQNEDGSYS
                     KETLFMSFLKAQGGQPVESLKTTLNPKLEAYKRAMAKESFSGPAINIDSIMTGKSDFK
                     SFFRYWAERGIEGDLYMYENNISKESAMGNWALDAEIKQALANGWKAKPSTIDSYADS
                     IMDRLNNLLGQTRV"
     gene            974..1744
                     /locus_tag="RJ318_001430"
     CDS             974..1744
                     /locus_tag="RJ318_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDV7431283.1"
                     /translation="MKKIILIFISFFALNLSAKDLVVGMELGYPPFEMSDKTGKASGI
                     SVDFLEAFAKKNGYKLVVKNIAWDGLIPALKTAKIDLIMSSMTITDKRKKVVDFSIPY
                     AKANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLKNATINLFDKENAA
                     ILEVIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVRKGDEALKDK
                     LDNFIDESRKNGFLDFLGNKYLKDIKEVFKQNNITFFL"
     gene            1837..2064
                     /locus_tag="RJ318_001431"
     CDS             1837..2064
                     /locus_tag="RJ318_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7431284.1"
                     /translation="MKKVAFFLLFLFLSCTVLNAAREYCKYAYQEDRAIPLILNYGIR
                     LGVVGAGVANAPAPGGSTYNSKIDMMAARCH"
     gene            2090..2314
                     /locus_tag="RJ318_001432"
     CDS             2090..2314
                     /locus_tag="RJ318_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431285.1"
                     /translation="MLEFIFTLILDFTFYSIKTLEKVFLGRTALVILFVVFIALFCVK
                     GLFLYILLALELFLLLYLFLGILFLRFYKS"
     gene            complement(2311..3045)
                     /gene="fliP"
                     /locus_tag="RJ318_001433"
     CDS             complement(2311..3045)
                     /gene="fliP"
                     /locus_tag="RJ318_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344227.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HDV7431286.1"
                     /translation="MKKILLFLLLSMSLFAAEATIPTVNLSLSAPNTPNQLVTTLNIV
                     IVLTILALAPSIVFVMTSFLRLIVVFSFLRQAMGTQSMPPNTILVTLALILTFFIMEP
                     VATKSYNEGIKPYLAEKIGYEEAFIKGAKPFKDFMLKNTREKDLALFYRIRNLPNPKT
                     IDDVPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISL
                     PFKLLIFVLVDGWNLLVQRLVESFVT"
     gene            3188..4477
                     /gene="glmU"
                     /locus_tag="RJ318_001434"
     CDS             3188..4477
                     /gene="glmU"
                     /locus_tag="RJ318_001434"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDV7431287.1"
                     /translation="MKTSILILAAGLGTRIKSQKPKVLQELCQKSMILHILKKAFALS
                     DDVSVVLSHQKERVEKEILEYFPKTQILEQDLQNYPGTAGALSGFEPKNERVLILCGD
                     MPLVEQTSLEALLGNNAKLNLAVFKARDPKSYGRVVIKNDSVEKIVEFKDANTQEKEI
                     NTCNAGVYVIDSRLLKELLPLIDNNNAAKEYYLTDIVKLAKEKDVMIKAVFVDEDEFM
                     GINDKFELSIAENFMQKKIKKYWMQQGVIFHLPQSTFIGADVEFVGECEVYENVRIEG
                     KSKIINSIIKSSSVIENSIVENSDVGPLAHLRPNCELKNTHIGNFVECKNAKLNTVKA
                     GHLSYLGDCEIDSGTNIGCGTITCNYDGVKKHKTIIGKNVFVGSDTQFIAPVKIEDEV
                     IIAAGSTVSINVEKGALFINRAGHKMIKDYYYKKFQK"
     gene            4474..5628
                     /gene="coaBC"
                     /locus_tag="RJ318_001435"
     CDS             4474..5628
                     /gene="coaBC"
                     /locus_tag="RJ318_001435"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDV7431288.1"
                     /translation="MKTILLAISGSIAFYKSYELISLFKKEGFRVKVLLSNGLLKFAS
                     KMSFEALVDEVLCEENESWQNSNNHIAFSKDVDLVLFTPASVNSINKLAFGIADNLFI
                     QTLIAANKPLIIAPAANTNMFHHFSTQNSLKILKENKALIIEPICKVLACKDEGVGAL
                     AEVKDIFNITKRELLKEKFWCNKSVVITGGGTRERIDDVRCVSNFSSGKMAKAIADAF
                     YFLGARVKLLSSVEFDTPYELCKFESSKDLKELLDKNLSHDFLIMTAAVSDFIPQSVK
                     GKIKKNEHLQGLNLHLSLNEDLLKTCKFQGKKIGFKMEFDSQNALENAKKSLKDKQLD
                     MVCLNIIDQKNYFGSDQNELYFITLNNENKSTLQSKEKLAFELVKWCEKL"
     gene            5625..6242
                     /locus_tag="RJ318_001436"
     CDS             5625..6242
                     /locus_tag="RJ318_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431289.1"
                     /translation="MSMINSTLPIQMKVLAKSGYGHYTLLLNHKKIQTKSMIELEIGA
                     EYLAELYMQNGGVIQFKHLSKRPNFKPFEEGLALIIAILEDKISYKKFIIQNLLDCKD
                     IERYQILKEMLFASFENIYHIPFNFENKSCLFQMRKRAKYLEIYLYFSVFGALKILID
                     SQGISVFTPFAKVQKFLNEHLDFNVSQENKIEPLFVFKRLFDFKG"
     gene            6246..6914
                     /gene="uppS"
                     /locus_tag="RJ318_001437"
     CDS             6246..6914
                     /gene="uppS"
                     /locus_tag="RJ318_001437"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HDV7431290.1"
                     /translation="MNELKHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCM
                     EENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLDEALEKFEKNNVCLRAIGDLSRL
                     EDKVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRVIEKKLELNEENLTQNL
                     DLPLDVDLMLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRER
                     TFGK"
     gene            6911..7158
                     /locus_tag="RJ318_001438"
                     /pseudo
     CDS             6911..7158
                     /locus_tag="RJ318_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344232.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
BASE COUNT         2568 a          858 c         1326 g         2406 t
ORIGIN      
        1 aaaaaagctg ccgaaaatga tcctgttgtt tcaagtacaa aagaatactt aggcgtaagc
       61 agttattatt ctaatataga tatagcaaat actataaaac aatattataa tcttttttct
      121 aatgctctag gtcaaagctt tccaaatgat aaaacaagtt ttagtgaagc agatataaat
      181 tctatgccta gtggttatgg tgtaagtgga acgcaatgga tggactttaa tgagccaagc
      241 aatagaatga atattacagg tttaaaagat ttttcaaatt ctttaatttc aaatgtttat
      301 aaaacccctg aacaagcaaa agaagctgat gaaatttgac ttgattcagg atgtatgatc
      361 aaaggattat catctgagac tttaggttta tccttagaag aaatcaaaaa tgtttctaga
      421 ggtgaagatt ggcaatttaa tcctgatatg tcagtttatc cacaaaatga agatggaagc
      481 tattctaaag aaactttgtt tatgagtttt ttaaaagctc aaggtggaca acctgttgag
      541 agtctaaaaa ccacacttaa tccaaaatta gaagcttaca agagggctat ggctaaagag
      601 agttttagtg gtcctgcaat taacattgat agtattatga caggtaaaag tgactttaaa
      661 agctttttta gatactgggc agagcgtggc atagaaggtg atttatatat gtatgaaaat
      721 aacatttcta aagaatctgc tatgggtaat tgggctttag acgctgagat taaacaagct
      781 cttgctaatg gttggaaagc aaaacctagc actattgatt cctacgctga ttctataatg
      841 gatagattaa ataatctttt gggacaaact agggtttagg aagtattaat tttttaagtt
      901 tgaaataaat tgctaataac aaaataagat aaaactagta taattttttt acaaaaaaaa
      961 ttgaaaggaa attatgaaaa aaattatttt gatttttatc tctttttttg ctttaaattt
     1021 gagtgcaaaa gatttggttg taggaatgga gcttggatat ccgccttttg aaatgagcga
     1081 taaaacaggc aaagcaagtg gaattagcgt ggatttttta gaagcttttg caaagaaaaa
     1141 cggctataaa cttgtagtaa aaaatatcgc ttgggatggt ttaatacctg ctttaaaaac
     1201 agccaagata gatcttatta tgtcctctat gacaattacc gataagagaa agaaagtggt
     1261 ggattttagc attccttatg ctaaggcaaa tttggctatt ttaactcctt tgaactctga
     1321 tattacaaat atcaaagatt tagataaaaa gggcaaagtt ttggctttaa agcgtggttc
     1381 tacagggcat ttatatgcgg ttaaaaattt aaaaaatgca actattaatt tatttgataa
     1441 agaaaatgct gctattttgg aagtgattca aggcaaggct gatggatttt tttatgatca
     1501 acttacgatt tatcggactt ggcaaaagca tcaagataca accagagcca ttttagcgcc
     1561 ttttcaagaa aatcctgagt tttggggtat agctgtaaga aaaggtgatg aagctttaaa
     1621 ggacaagctt gataatttca ttgatgagag taggaaaaat ggctttttag attttttggg
     1681 caataagtat ttaaaagaca ttaaagaagt ttttaagcaa aataatatca cttttttctt
     1741 gtaggctttt aataaaatat tgataattaa tattaatttt atgaattttg atatacaata
     1801 tcattatcta aattttaaat aaaaggattt aagataatga aaaaagttgc attttttttg
     1861 ttatttttgt ttttatcttg cactgtacta aacgcagcta gggagtattg caaatatgct
     1921 tatcaagaag atagagctat acctttaatt ttaaattatg gaataagatt gggggtagta
     1981 ggtgctgggg ttgcgaatgc acctgcaccg ggcggaagta cttacaattc aaaaattgac
     2041 atgatggctg caagatgcca ctaagcttag tttttgggtg tattttacaa tgctagaatt
     2101 tatttttact cttattttag attttacttt ttattctatc aagaccctag aaaaagtctt
     2161 tctagggcga acagccttag taattctttt tgttgttttt atagctcttt tttgcgttaa
     2221 aggcttgttt ttgtatatac ttttagcttt agaattattt ttgcttttgt atctttttct
     2281 tggaattttg tttttaagat tttataaatc ttaggttaca aagctttcca caagcctttg
     2341 cactagcaaa ttccatccat ccactaatac aaaaattaag agtttaaaag gtaaagagat
     2401 catagtagga ggtagcatca tcatacccat agccattaaa actgagctta caaccatatc
     2461 tatgactaaa aagggtaggt agattaaaaa ccctatttca aaagcggttt taagctctga
     2521 aatcataaaa gcaggaacta aaaccgtaag gggaacatca tctatggttt tgggattggg
     2581 tagattgcgt atgcgataaa aaagggctaa atctttttcg cgagtatttt taagcataaa
     2641 atctttaaaa ggctttgctc cttttataaa agcctcttca tagcctattt tttctgctaa
     2701 ataaggtttt ataccttcat tataggattt tgtagctaca ggttccatga taaaaaaagt
     2761 taaaattaaa gccaaggtta ctaaaatggt attaggtggc atactttgcg tccccatagc
     2821 ttgtcgcaaa aatgaaaata ctacaataag acgcaagaaa gaagtcataa caaaaactat
     2881 acttggagcg agcgcaagta tggttaaaac aatcactata tttaaagtag taacaagctg
     2941 attaggtgta ttgggtgcac ttaagcttaa atttactgta gggatagttg cttcagcagc
     3001 aaataagctc atgcttaaaa gtaaaaataa taatattttt ttcaaaattt aaaaaccttt
     3061 ttttgttttt tactaaagaa atttaaattt tatcttttga tgactaaaaa ctagtttaag
     3121 ggtattagga ttttaacttt aaactgctaa aatagtcttt tagacttctt aataacaaag
     3181 gtaaaaaatg aaaacttcta ttttgatttt agcggcagga ttaggcacta gaataaaatc
     3241 acaaaagcca aaggttttgc aagagctttg tcaaaaaagt atgattttac acattttaaa
     3301 aaaggctttt gctttaagtg atgatgtaag tgtagtttta tcgcatcaaa aagaacgcgt
     3361 tgaaaaagaa attttagaat attttccaaa aacacaaatt ttagagcaag atttgcaaaa
     3421 ttatccagga actgcgggag ctttaagtgg gtttgagcct aaaaatgaaa gagtgttgat
     3481 tctttgtggt gatatgcctt tggttgagca aacaagtttg gaagctttgt tgggtaataa
     3541 tgcaaaatta aatctagcag tttttaaagc aagagatcct aaaagttatg gtagggtggt
     3601 gataaaaaac gatagcgttg aaaaaattgt tgaatttaaa gatgcaaata cgcaagaaaa
     3661 agagataaat acttgcaatg ctggggttta tgtgattgac tcgaggcttt taaaagagct
     3721 tttacctttg attgataaca ataatgcggc aaaagagtat tatttaaccg acattgtaaa
     3781 actagcaaaa gaaaaagatg tgatgattaa agcagttttt gtagatgaag atgaatttat
     3841 ggggattaat gataaatttg aactcagtat agctgaaaat ttcatgcaaa aaaaaattaa
     3901 aaaatactgg atgcaacagg gtgtgatttt tcatttaccg caaagcactt ttataggtgc
     3961 agatgttgaa tttgtaggtg aatgtgaagt atatgaaaat gtaaggatag agggcaaaag
     4021 taagattata aactctatca ttaaaagttc aagcgtgata gaaaattcca tcgtagaaaa
     4081 tagcgatgta gggcctttgg cacatttgcg tccaaattgt gagttaaaaa acactcatat
     4141 aggaaatttt gtagaatgca aaaatgcaaa gttaaatacc gtaaaagcag ggcatttgag
     4201 ctatttagga gattgtgaga tagatagtgg aaccaatata ggctgtggga ctatcacttg
     4261 taattatgat ggggtaaaaa agcataaaac catcatagga aaaaatgttt ttgtaggttc
     4321 tgatacgcaa tttatcgcac ctgtaaaaat cgaagatgaa gtaatcatag cagcaggaag
     4381 cacagtaagt atcaatgtag aaaagggtgc tttgtttatc aatagagcag ggcataaaat
     4441 gataaaagat tattattata agaaatttca aaaatgaaaa ccatactttt agccattagc
     4501 ggtagtatag ctttttataa atcttatgag cttatttctt tgtttaaaaa agaaggcttt
     4561 agggtaaaag ttttgctttc taatggtttg ttaaaatttg ctagcaaaat gagttttgaa
     4621 gccttggttg atgaagtttt atgtgaggaa aatgaaagtt ggcaaaattc aaacaatcac
     4681 atagctttta gcaaggatgt agaccttgtt ttgtttaccc ctgcaagtgt taattctatc
     4741 aataaacttg cttttggtat agcggataat ctttttatcc aaactttaat tgcagcaaat
     4801 aaacctctta tcatagctcc tgcggcaaat acaaatatgt ttcatcattt tagcacgcaa
     4861 aattctttaa agatacttaa agaaaataaa gctttgatta tagagcctat ttgtaaagtt
     4921 ttagcttgta aagatgaagg cgtaggagcc ttagctgaag ttaaggatat ttttaatatc
     4981 accaaaagag agcttttaaa agaaaagttt tggtgcaata aaagcgtagt tatcacaggt
     5041 ggcggcacaa gggaaagaat cgatgatgtg cgttgtgtga gtaatttttc aagtggaaaa
     5101 atggcaaaag ccatagctga tgctttttat tttttaggag ctagggtaaa acttttaagc
     5161 tctgtggaat ttgatacgcc ttatgagctt tgcaaatttg aaagttctaa ggatctaaag
     5221 gagcttttgg ataaaaattt aagtcatgac tttttgatta tgacggctgc agtgagtgat
     5281 tttatccctc aaagtgtaaa agggaaaatt aaaaaaaatg agcatttaca gggtttaaat
     5341 ttgcatctat ctttaaatga agatttgctt aaaacttgca aatttcaagg caaaaagata
     5401 ggttttaaga tggaatttga ttctcaaaat gccttagaaa atgcgaaaaa atctctaaaa
     5461 gataaacaac ttgatatggt ttgccttaat atcattgatc aaaaaaatta ttttggaagt
     5521 gatcaaaatg aactttattt tatcacttta aacaatgaaa ataaaagcac tttgcaaagc
     5581 aaagaaaaat tggcatttga attagtaaaa tggtgtgaaa aattatgagt atgattaatt
     5641 ctactttacc tatacaaatg aaagttttag ctaaatcagg ttatggacat tatacgcttt
     5701 tattaaatca caaaaagatt caaaccaaaa gcatgataga gcttgaaatt ggtgctgaat
     5761 atttagctga actttatatg caaaatggtg gagttataca atttaaacat ctttcaaagc
     5821 gtcctaattt caaacctttt gaagagggat tggctttgat aatcgctatt ttagaggata
     5881 aaatttctta taaaaaattc attatacaaa atcttttaga ttgtaaagat atagagcgtt
     5941 atcagatatt aaaagaaatg ctttttgcaa gttttgaaaa tatttatcat attcctttta
     6001 actttgaaaa taaatcttgc ttgtttcaaa tgcgtaaaag agcaaaatat ttagaaattt
     6061 acttatattt tagcgttttt ggagctttaa aaattttaat agactcgcaa ggcattagtg
     6121 tttttacacc ttttgccaag gtgcaaaaat ttttaaacga acatttagat tttaatgtat
     6181 ctcaagaaaa caagattgaa cctttgtttg ttttcaaaag gctttttgat tttaaaggat
     6241 gaaaaatgaa tgaattaaaa caccttgctg ttgttatgga tggcaatagg cggtgggcta
     6301 gagctaaggg ttttttggca aagcttggat attcccaagg agtcaaaact atgcaaaaat
     6361 tgatggaagt ttgcatggaa gaaaatattt caaatttaag cctttttgct tttagtacgg
     6421 aaaattggaa gcgtcctaaa gatgaaattg attttatttt tgaactttta gatcgttgtt
     6481 tggatgaagc tttagaaaaa tttgaaaaaa ataatgtgtg tttaagagct ataggtgatt
     6541 tatcgcgttt ggaagataaa gtaagagaaa aaattacctt agttgaagaa aaaacaaagc
     6601 attgtgacgc actttgtgtt aatttggcta taagttatgg tgcaagagat gaaattataa
     6661 gagctgctaa gcgtgtgatc gaaaaaaaac ttgagctaaa tgaagaaaat ttaacgcaaa
     6721 atttagattt acctttagat gtggatttga tgcttcgcgt tggaaatgct aaaagacttt
     6781 caaatttctt actttggcag tgttcatatg ctgaaattta ttttagtgaa actttatttc
     6841 catctcttac caagagagaa tttaaaagga ttattaaaga atttagaaat agagaaagaa
     6901 cttttggaaa atgatatttt tcataataat tctaggggct tgtttgggtt ctttttgcac
     6961 aagtttggca agtaggataa ttgaaaaaaa aactcttttt tatctcgcgc tctttttgtt
     7021 tttcttgtga tacaaaatta aaatactatg aaattattcc tattttttct tatatttttt
     7081 taaaggcaaa atgtcaaact tgtaaatgtc atttgtctat ttctttgtta atcaatgaaa
     7141 ttttaggcgc aattttgc
//
LOCUS       DAPIYB010000081         6892 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.082, whole genome shotgun sequence.
ACCESSION   DAPIYB010000081 DAPIYB010000000
VERSION     DAPIYB010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6892
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.082"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..648
                     /locus_tag="RJ318_001439"
     CDS             <1..648
                     /locus_tag="RJ318_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431291.1"
                     /translation="SVVLSSSVCFAAVQAASKDGKIFYISEHSFKDNQVYDPQAEIFK
                     KINGKNFYASKSKYPISNLTMIYNNPKSGNKNLSKLEILTPDTSKEEIITAFSTLGTV
                     SSDTQAVPSSFMPFIVTAYAQNTNATNNKLILENGELSSVYFCKPSIGDCGVPNNSQK
                     GDRFKYLITAAFTDRGEGFNNQTILKENSYINNGCRKYLHLALKWSSLYFRICSF"
     gene            578..2506
                     /locus_tag="RJ318_001440"
     CDS             578..2506
                     /locus_tag="RJ318_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431292.1"
                     /translation="MGVENIYTLPLNGVPYISGSVAFDGEAKDNKLILESNTKIDLHN
                     SQYFSDEEGKDIYDERITRLMGAFGINSNLQNNKVLIDSANIVLHGPDGEYTARSTFE
                     ILGALADVNNLKKYNVSKNSVIIKNLNLDLMVNSQNKITFYDAVLFGEIYGGRTLQGN
                     AEKNSIEVYHFNSLDHLNKNIKTHASLNLYGGYSNDGEANGNKIVFRLKKPLKISDNF
                     YGKNYYNLYGGFATEGANFNVFDIQNDLTYEKVPQNYSDKFTVYAARTLSGKANNNTL
                     SIKDSVISLPLYAFITSETTLDGIDYIADESNNNEVNFENIKSSKNLSLMINAKNVSN
                     NKINYNLIQSLTEASSLGKGSKIILKATQNANNNLIKLKDCSSAAVESSCIIKADKES
                     AFNKIINNNTAFSTASDKRQGYVGLIAGVSANSHDNIMELVNLNIDEYKNQDAIFLAP
                     SGTSDISNFKSYNNTLYLGGELNFFKDVNIDLLSGSVFHEVNKKGKIITQILPHQEDF
                     SKNNRLIIDTQDVKSEVVNNFENFTFILPNKIKNPILTIEKLINLPANGSMEILTKNK
                     PTKGKYILIQSDVGIYDGDNGLLNQQELENLLEKMKNNKNKFNYNKIEKLAKSTLKNV
                     NFSFEVSDDAKIIYINIL"
     gene            2518..3973
                     /locus_tag="RJ318_001441"
                     /pseudo
     CDS             2518..3973
                     /locus_tag="RJ318_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002874703.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
     gene            4113..5039
                     /locus_tag="RJ318_001442"
     CDS             4113..5039
                     /locus_tag="RJ318_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431293.1"
                     /translation="MQYNNEVTGKKDFDSAVRKKFNDIKYLDNNSYAFADSFTKATDA
                     VKLSKDDFDPKLLQRILDDLMNGKYTYDFDTKTWTYTDSKGVVGKDEASEITQSLNFL
                     NAFKDTGVEQEFLKLWQGSQEQNYKNYTNLYEKWTQKKTAMDKIKTGEGYFASFKEEL
                     QKYQEALAQLDKENKNYEKIKESGLVSDETLRAIYEKLLEQKEALEKQFADLSGNEGF
                     RYKLENEILNSQGFSIEGKDVDGKVYTGNFNFKGKLASLPEKPNISIYEPDKQGGEDP
                     DKPSVLPPEIPEKVVEAPIKIQTEVDAKKRRR"
     gene            5152..6721
                     /locus_tag="RJ318_001443"
                     /pseudo
     CDS             5152..6721
                     /locus_tag="RJ318_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856720.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
BASE COUNT         2656 a          828 c         1222 g         2186 t
ORIGIN      
        1 agtgtggttt tatcttcttc ggtttgtttt gcggcggttc aggctgcaag caaggatgga
       61 aaaatttttt atatttctga acattctttt aaggataatc aagtttatga tcctcaagca
      121 gaaattttta aaaaaattaa tggaaaaaat ttctatgctt ctaagtcaaa ataccctata
      181 tcaaatttaa ctatgattta taataaccct aaatctggaa ataaaaattt atccaagctt
      241 gaaattttaa ctccggatac ttcaaaagaa gagatcataa cagcttttag cactttagga
      301 accgtatctt cagatactca agccgttcct agttctttta tgccttttat tgtaacagct
      361 tatgcgcaaa atacaaatgc aacaaataat aaacttatat tagaaaatgg agaattatct
      421 tctgtgtatt tttgcaaacc aagcataggg gattgtggag tacctaataa ttctcaaaaa
      481 ggcgatcgtt ttaagtattt aattactgcg gcgtttactg acagggggga gggatttaac
      541 aatcaaacca ttttaaaaga aaactcctat atcaataatg ggtgtagaaa atatctacac
      601 cttgccctta aatggagttc cttatatttc aggatctgta gcttttgatg gtgaagctaa
      661 agacaataaa ttaatcttag agtcaaatac aaaaattgac cttcataatt cccagtattt
      721 ttcagatgaa gaaggtaagg atatttatga tgaaagaatt actcgtttaa tgggagcttt
      781 tggcataaat tctaatttac aaaacaataa agttcttatc gattcagcca atatcgtcct
      841 tcatgggcca gatggtgagt atacagctcg ttcgaccttt gaaattttag gtgctttagc
      901 tgatgtaaat aatcttaaaa aatacaatgt aagtaaaaat tctgtaataa ttaaaaattt
      961 aaatttagat ttaatggtaa attcgcaaaa taaaataact ttttatgatg ctgttttatt
     1021 tggagaaatt tacggtggaa gaacattaca gggtaatgca gagaaaaatt ctatagaagt
     1081 ttatcatttt aactcattag atcatcttaa taaaaacatt aaaacacatg catcgttaaa
     1141 cctctatggt gggtattcta atgatggtga agctaatgga aataaaattg tatttcgtct
     1201 taaaaaacct ttaaaaatca gtgataattt ttatggaaaa aattattaca atctttacgg
     1261 aggttttgct acagagggtg cgaattttaa tgtttttgat atacaaaatg atttaaccta
     1321 tgaaaaagtt ccacaaaatt attctgataa atttaccgta tatgcggcaa gaactttaag
     1381 tggaaaagca aataataata ccttaagtat aaaagattct gttatttcat tgcctttata
     1441 tgcttttatt acaagtgaaa ctacgctaga tggtatagac tatatcgccg atgaatcaaa
     1501 caataatgaa gtaaattttg aaaatattaa atcatctaaa aatttaagtt tgatgatcaa
     1561 tgctaaaaat gtttcaaata ataaaataaa ttataatctc attcagagtt taaccgaagc
     1621 gagttcttta ggaaagggct caaaaattat tttaaaagca actcaaaatg caaacaacaa
     1681 tcttataaag cttaaagatt gttcttcggc tgccgtggaa agttcgtgca tcataaaagc
     1741 agataaagaa agtgctttta ataaaatcat caacaacaac acagctttta gtactgcctc
     1801 agataaaaga caaggttatg tggggttgat agctggagtg tctgcaaatt ctcatgataa
     1861 tatcatggag cttgttaatt taaatataga tgagtataaa aatcaagatg ctatattttt
     1921 agctccatct ggaacttcgg atatttcaaa ttttaaatct tataacaata ctttatattt
     1981 aggtggagag ttgaatttct ttaaagatgt aaatatcgat ttgctttctg gttctgtttt
     2041 tcatgaagta aataaaaaag gtaaaataat cactcaaatt ctaccgcatc aagaagattt
     2101 ttctaaaaac aatcgtttga ttatagatac tcaagatgtc aaatcagaag tggtaaataa
     2161 ctttgaaaat tttactttta ttttaccaaa taaaataaaa aatcctatct tgactataga
     2221 aaaacttatc aatcttcctg caaatggaag tatggaaatt cttactaaaa ataaaccaac
     2281 aaaaggaaaa tatattctca tacaaagtga tgttggaatt tatgatggtg acaatggatt
     2341 gttaaatcaa caagaattag aaaatttgtt agaaaaaatg aaaaataata aaaataaatt
     2401 taattacaac aagatagaaa agttggctaa aagtacattg aaaaatgtaa attttagctt
     2461 tgaagtttca gatgatgcaa aaataattta tatcaacata ctttaaagga gagtaacatg
     2521 aaaaagatga gtaaacatat agttttatca tttgcggtga gttctttgct cttttctcaa
     2581 gcttatgctt tactaagtgg gggtaaattt actcatggta caagtgggac tatccatacc
     2641 tctggcaata ctgtaacgat tacaggaaaa ggacaaaatc atgttatcca atggggtggc
     2701 ggttttaata taggacaaaa tgaaagtgta aattttaacg gcaaaaatca aaactaccta
     2761 aacattgctt atcaaaaaga tgcttctaag atagacggag ctttaaatag agggaataac
     2821 aatatctttt tagttaatcc tatgggagtt ttgattggca aaacaggaac tattactgcg
     2881 ggaaaatttg tagctagcac aacagcttta agtgatgata atgtcaaaac ttttttagag
     2941 aaaggagcta gtttctctcc ggcatttgat gtaagcaaac aaggaaatat tataaatctt
     3001 ggaaagatca atgcagataa tattgtttta ataggaaata aggttgaaat caataaagga
     3061 aaaattactt tggatgtatt aaaacttgaa ggtaataaag tttatgttga tgctggagtg
     3121 gtaaaagata caaaaaatat cgtagccaaa gcagagcaag aagctatcat tcaacaaagc
     3181 ataacaagtt ttgaagaaga tggagcttta ttgggtaatt ctagtagtaa atttagtttt
     3241 gatgatagta gtaaagttaa aaactggact aaatatggaa gtattgcgga tgcaacagaa
     3301 tggaataaat ttgctgattt ttggaatgta aataaagaaa aatttagaac agcttttgat
     3361 cattttcgtt tgattgatga tattgatttt agtggcgtga aaacatacat agtaggtgat
     3421 aatacaagca atgcttttgc taaatctttc gatggttctg gttatgcttt aaaaaatgtt
     3481 aatattaatt catcaaatca atatgtagga atttttggag ttgttcaaaa tagctatata
     3541 agaaacttta atattcaagg attgaaaatt gcttcaactg gttatgatgc ttagttggag
     3601 gtatagtagg gcaaaatatt gcaaacagtt atacgggttt tgaaaatgtg actgttaatg
     3661 atctcgttat taatacagct gtaaatacta aagttggcgg aataataggc tggggaaatg
     3721 gtagtggagg gaataacact atcaatttta caaatgttgc tattaataat ataagtatag
     3781 tagcaaagaa ggttcttatg tgggtggcat aggcagacaa attgatggtg gtaattttaa
     3841 taatgttgtg gttaatgaca tagaaaaact tataacttct gggaatgata gtaaaacagg
     3901 aggatttact ggaaaagttg gaaatttaaa gattaataat gcttacttat tttataaaat
     3961 ggagcaattt tgagtgctgg aaactataaa acacaagctg gaaaagttat tggtgatcct
     4021 ggaattagtg taaataataa ttttagtaat atttatgttt atcataattt agaaaatggt
     4081 tacattgatg aaggacagaa ttttttaagt ctgtgcaata taataatgaa gtaacaggaa
     4141 aaaaagattt tgatagtgct gtaagaaaga aatttaacga tataaaatat cttgataata
     4201 attcttatgc ttttgctgat tcttttacca aggcaacaga tgctgtgaaa ttatccaaag
     4261 acgactttga ccctaaattg cttcaaagaa ttttagatga tttgatgaat ggaaaataca
     4321 cttatgattt tgataccaaa acttggactt acacagatag taagggtgtg gtaggaaaag
     4381 atgaggctag tgaaatcact caaagtttaa atttcttaaa tgcgtttaaa gatacgggag
     4441 tagaacaaga atttttaaag ttatggcaag gttcgcaaga acaaaattat aaaaattata
     4501 ccaatcttta tgaaaaatgg acgcaaaaga aaactgctat ggataaaatc aaaaccggcg
     4561 aaggttattt cgctagtttt aaagaagaat tacaaaaata ccaagaagcc ttagctcaac
     4621 ttgacaaaga aaataaaaac tatgaaaaaa tcaaagaatc aggcttagtt agcgatgaaa
     4681 cattaagggc tatatatgaa aaacttttag aacaaaaaga agctcttgaa aagcagtttg
     4741 cggatcttag tggaaatgaa ggatttcgct ataagcttga aaatgaaatt ctaaattctc
     4801 aaggtttttc tatagaaggt aaagatgtag atggtaaagt atacactgga aattttaatt
     4861 ttaaaggaaa attagcctca ttgccagaaa aaccaaatat atctatctat gagccagata
     4921 aacaaggggg tgaagatcca gacaaacctt ctgtattgcc gcctgaaatt cctgaaaagg
     4981 ttgtagaagc tcctataaaa attcaaaccg aagtagacgc aaaaaaaaga agaagatgat
     5041 gatcaagtgg aaataggaga agcagatgct agaagtagtg gtttgcgttg tattgtaagt
     5101 gataatttta agacaatgaa tatttgtgta aatgcaaaat aggaaataaa aatgagaaaa
     5161 attttagttg ttttagtctt attgcaagta ttttcacatg ctgaagagct aaataataat
     5221 aaaataagag agcttataga aagctctcct gaagcaaatg aaccacaaaa taaaaattta
     5281 aaaaatacat taaaaaatca aaaaagccct gtaaatttca aagagcaaaa tactacaaat
     5341 attacaaatt cacaaactga tcaaaatgaa gctaaggttt ttgtaagaga gtatgttttg
     5401 catatcgata ataaagattt gacatttaaa aaattaagaa ttagcgaaaa ataaattcaa
     5461 gatgcaatag ctgaatatcg caaccaagaa ttaagcttac aaaatttaaa agatataaca
     5521 aacattatag cttattattg tcaattaagt ggccatcctt cggcaactgc ttatatacca
     5581 ccgcaagatt taagttctaa caaagtgcaa attaacatag cttttggaac tttataggaa
     5641 aagtaattat taaaaacaac tcaggtgtca gagattatgc tttagagagt aaattgaaca
     5701 aaaatcttaa agggaaagtt atcacaacta aaaatgtgga aaatgaaatt tataaaatca
     5761 atgaaatata cggaatccaa accaatgcta atttacaatc aggtgatggt tgtggagaaa
     5821 gcgatgttat tatagaagta aacaaaggtg agatagtgta actttaactt tatattctaa
     5881 caactatggg actaaagaaa caggtcgttt tagagcagga atgagtcaaa gtttaaacaa
     5941 tatagcaaga taaggggata acttaaattt ttatcttcaa gatagtgatg aaaatcaaac
     6001 agattatggg attaattata gtacttttat agggaattta aaaattactc catttgcaac
     6061 tcaaggacat tatgttcctg gcagaattta tagaaatctt agtttttata gggactctat
     6121 gaatgttgga gtaaattttt cttatcctgt gtttttatat actgagtatt ctttatatct
     6181 tgtttcgggt tttactcata aaaagattaa agattattat cttgatggtt tagtaagcaa
     6241 tgaaaaagcg agaaatagtg taaatttggg catagaaaga acttatagag gtttggagaa
     6301 taatgtccta agttatactt taaattttat atatggtaat gttgaaaatg atggtgattt
     6361 ttctggattt aatggagtaa atttaggaaa ttttggaaaa atgaatttaa atttaagcaa
     6421 caaatatcaa ttctaagaac gcttaactca catttttcaa ctcaattatc aaaaagttat
     6481 cagcgatgct gttttagata gtagtgaatc cgtatcttta ggtagacctt gtggtgtatg
     6541 tgtttgttta gaaggtgagg gaagtgcgga taatgttgtt tctggcgcct tgggaataag
     6601 atttcaaaca cctttagaag ggctttactc gactcctttt tatgatatag ggtattcttg
     6661 gtatgaaaat aaagaatatc aaagtgaaaa tcattatctt atggatgcaa tgggtatata
     6721 aatactctat acaagaagtg ctaattttta tgtaaaaatg gatgctgcaa gagctgttca
     6781 tcagtttaaa cacgatggag aacatcgagc aagagtttat gcaagcctag aaaaatactt
     6841 ttaactttgg ggtgattgga aaatcccccc ccccccattt ttaaacccac ca
//
LOCUS       DAPIYB010000082         6830 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.083, whole genome shotgun sequence.
ACCESSION   DAPIYB010000082 DAPIYB010000000
VERSION     DAPIYB010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6830
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.083"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            108..392
                     /locus_tag="RJ318_001444"
     CDS             108..392
                     /locus_tag="RJ318_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDV7431294.1"
                     /translation="MAVKITDICIACGSCIDECPVNAIVDDTNNPEGEDRYYVYANKC
                     VECVGHNDQPACASACPTDGCIVWSAVESGQPSRDNIGADMRSGDTPVFA"
     gene            505..918
                     /gene="ndk"
                     /locus_tag="RJ318_001445"
     CDS             505..918
                     /gene="ndk"
                     /locus_tag="RJ318_001445"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDV7431295.1"
                     /translation="MEKTLSIIKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQ
                     AENFYAVHKERPFFKDLVEFMISGPVVVSILEGEGAVLKNRDLMGATNPKEAKAGTIR
                     ADFAESIDANAVHGSDSLENAKIEIEFFFKPNEIC"
     gene            919..1269
                     /locus_tag="RJ318_001446"
     CDS             919..1269
                     /locus_tag="RJ318_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431296.1"
                     /translation="MKIPFSKINTKEYPFKLNLENMIFEGNLVKINPKLVKINAIMQG
                     FIYRPCDSCGTELELEIKENLELFASDGIFKDEANKLSNTIEFFDGHIDLIEVAISEL
                     EAYLSDYFYCINCK"
     gene            1297..1443
                     /gene="rpmF"
                     /locus_tag="RJ318_001447"
     CDS             1297..1443
                     /gene="rpmF"
                     /locus_tag="RJ318_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDV7431297.1"
                     /translation="MAVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPT
                     TKEY"
     gene            1449..2435
                     /gene="plsX"
                     /locus_tag="RJ318_001448"
     CDS             1449..2435
                     /gene="plsX"
                     /locus_tag="RJ318_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDV7431298.1"
                     /translation="MINIAIDAMGGDFGEKPIIEGVLKALETKPFNAILVGNSKILKP
                     LIPKKLEQYIQYEEASEIFSMNGNATDALKNKETTIYKAINLLKEKKVDAVVSAGHSG
                     ASMSLATLKLGRLKGISRPAIATLMPNIVNKTLLLDVGANTDCKAENLFQFAIMGEVY
                     AREIMQIQKPRLALLSNGEEECKGNELTKESHQLMKKIPNFIGNAEGRDIFNGEIDVL
                     VCDGFDGNVILKACEGVATAIFQLLKNEVKQSFISKIGALLMKPSFKKLKKHTDWQEY
                     GGAPLLGVNGCVIISHGKSDSRAIKNAIFQAINFSQSHINKFIENELGKYNA"
     gene            2428..3402
                     /locus_tag="RJ318_001449"
     CDS             2428..3402
                     /locus_tag="RJ318_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDV7431299.1"
                     /translation="MLKASLKSIASYIPEKILSNADLEKMVDTTDEWITRRTGIKERR
                     IASENENTSDLGTKAALKAIERANLKPEDIDAILVATLSPDYFTMPSTACKIASNLGL
                     VNISAFDISAACSGFIYLLEQAKALVESGLKKNVLIIGAEKTSSIMDYNDRSICILFG
                     DGAGAGVVSLDNENHILDVHTASNGNYGDLLMTQRSQKSSLCQTLSMQMKGNEVFKIA
                     VNTLSNDVVEILAKNNILAQEIDLFIPHQANLRIIKAVQEKLNLSDEKCVITVQKYGN
                     TSAASIPMAMNDAYEEGRLKKGNLILLDAFGGGFTWGSALLKFGGENF"
     gene            complement(3399..3749)
                     /locus_tag="RJ318_001450"
     CDS             complement(3399..3749)
                     /locus_tag="RJ318_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDV7431300.1"
                     /translation="MIKRFDECDRMSQIIVFDKYFKTAGQVAFEPSGDIKKQTKEALA
                     ELDALFEKIGANKGDLIQIQIWLANMQDFDAMNEIYDAWIKNYPKPVRACVGSALAEG
                     YLVEIQAFGKLREN"
     gene            complement(3746..4822)
                     /gene="serC"
                     /locus_tag="RJ318_001451"
     CDS             complement(3746..4822)
                     /gene="serC"
                     /locus_tag="RJ318_001451"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HDV7431301.1"
                     /translation="MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKV
                     FEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLALNGVCEYANTGVWTK
                     KAIKEAQILGVNVKTVASSEESNFDHIPRVEFSDNADYAYICSNNTIYGTQYQNYPKT
                     KTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPS
                     MLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL
                     SNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASI
                     YNALNLDQVKTLCEFMKEFQGKYA"
     gene            complement(4832..5995)
                     /locus_tag="RJ318_001452"
     CDS             complement(4832..5995)
                     /locus_tag="RJ318_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDV7431302.1"
                     /translation="MTPTELNLKAKALLETHFDDIVLSGEISKITLHGSGHWYFDLKD
                     ERSSIACAMFKGANLKVGFKPAVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLE
                     AQFLALKERLQKEGLFDPRFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAK
                     IYIFDALTQGNNAPFSLIQALKKADDMDLDVLIIARGGGSREDLFCFNDENLAREIFK
                     AKTPIISAIGHEIDYVISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLW
                     NYKIQNYENLLLNLSKFFKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDK
                     LQNAYLQHENFFNKSKKFICIRKNGKIANLEDLKSDDIVILSSQTSQKEAKIL"
     gene            complement(5992..6699)
                     /gene="ubiE"
                     /locus_tag="RJ318_001453"
     CDS             complement(5992..6699)
                     /gene="ubiE"
                     /locus_tag="RJ318_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDV7431303.1"
                     /translation="MQKQEKIIEMFNQIAPTYDKANRILSFGADVAWRKKACQRVMSL
                     YLKKDLKIADIACGTGDMIEIWQESALKMEKNILNIKGIDPSSGMLNVAKEKFPNVEF
                     IKAGAQNLPLESQSLDILSISYGIRNVVERQKALSEFARVLQKDGILVVLEFTKREKG
                     GFIAACRDFYLKNILPSIGGIISKNKSAYEYLPNSIEGFLSKKEFILELKNAGFEMLD
                     YKSFSFGVSSMFIAKKL"
BASE COUNT         2386 a         1096 c         1002 g         2346 t
ORIGIN      
        1 gaaagttata attatcatca aataaggtaa atttttgatt atcaaaattt accttattta
       61 agaattttat gctaaaatct tttaaatata ttaaataagg agaaaaaatg gctgtaaaaa
      121 ttacagatat atgtattgct tgtggttctt gtattgatga gtgtccagtg aatgctatcg
      181 ttgatgatac taacaatcca gaaggtgaag atagatatta tgtctatgca aacaaatgcg
      241 ttgaatgcgt aggacataat gatcaaccag cttgtgctag tgcttgccca acagatggat
      301 gtatagtttg gagtgctgta gaatcaggac aaccaagtcg tgataatatt ggtgctgata
      361 tgagaagtgg ggacactcca gtttttgcat aattttaaaa aattaaaaag ctagagattc
      421 ctagcttttt cttttaattt aactttcttt aaacaaattc aagtataatt ttaagcttta
      481 ttaaaataag gagttattac aaagatggaa aaaactttat ctataattaa acctgatgct
      541 gttaaaaaag gtgttatagg aaaaatttta gatcgttttg aaagcaatgg attaagaatc
      601 gctgcaatga aaaaagttca acttagtaaa gaacaagctg aaaattttta tgctgttcat
      661 aaagaaagac ctttttttaa agacttggtt gaatttatga ttagcggtcc tgttgttgtt
      721 tctatactag aaggagaagg tgctgtattg aaaaatagag atttaatggg agcaacaaat
      781 cctaaagaag ctaaagcagg aacaattagg gctgattttg ctgagagtat tgacgctaat
      841 gctgttcatg gaagcgatag cttagaaaat gcaaaaatag aaattgaatt tttctttaaa
      901 ccaaatgaaa tttgctaaat gaaaatccct ttttctaaga ttaatacaaa ggaatatcct
      961 tttaaactta atcttgaaaa tatgattttt gagggaaatt tagtaaaaat aaatcctaag
     1021 cttgttaaaa taaatgctat tatgcaaggt tttatctata gaccttgtga tagttgtgga
     1081 actgagttag aacttgaaat taaagaaaat ttagaacttt ttgcaagtga tggtattttt
     1141 aaagatgaag caaacaaatt gagcaatact atagaatttt tcgatggaca tattgattta
     1201 atagaagttg ctatcagcga gcttgaagct tatttgagtg attattttta ttgcataaat
     1261 tgcaaataat taattaaatt ttataaagga gaaaaaatgg cagtaccaaa gagaagagtg
     1321 agcaaaactc gtgcagctaa acgcagaact cactataaag ttagtcttcc tatgcctata
     1381 aaagacaaag atggaagcta caaaatgcct caccgtgcga atccaacaac taaggaatat
     1441 taaaatcaat gattaacatt gccattgatg caatgggtgg tgattttgga gaaaaaccca
     1501 ttatagaagg cgttttaaag gcactagaaa caaaaccttt taacgctatc ttagtgggaa
     1561 attctaaaat tctaaaacct ttaataccaa aaaaattaga acaatatata caatacgaag
     1621 aagctagtga aattttttcg atgaatggaa atgccacaga tgctttaaaa aataaagaaa
     1681 caaccatata caaagctatt aatttattaa aagaaaaaaa agtagatgct gtagtttcag
     1741 cgggtcatag tggagcaagt atgtctttgg ctaccttaaa gcttggaaga cttaaaggta
     1801 tttcaagacc tgctattgcc actttaatgc caaatatcgt taacaaaact ttacttttgg
     1861 atgttggagc taatacagat tgtaaagctg aaaatttatt tcaatttgcc ataatgggtg
     1921 aagtttatgc tagagaaatc atgcaaattc aaaaaccacg ccttgcttta ctttctaatg
     1981 gtgaagaaga atgcaaaggt aatgaactta ccaaagaaag tcatcagctt atgaaaaaaa
     2041 ttccaaattt tataggtaat gctgaaggta gagatatttt caatggtgaa atagatgttt
     2101 tagtctgcga tggttttgat ggaaatgtta tcttaaaggc ttgtgaaggt gtggcaacag
     2161 ctatttttca acttctaaaa aacgaagtaa agcaatcttt tatttctaaa ataggtgctt
     2221 tacttatgaa gccatctttt aaaaaattaa aaaaacacac agattggcaa gaatatggcg
     2281 gagcacccct tcttggagtt aatggctgcg tgatcataag tcatggaaaa agcgattcta
     2341 gagctattaa aaatgcaatt tttcaagcta taaattttag ccaatctcat atcaataaat
     2401 ttatagaaaa tgaacttggg aaatacaatg cttaaagcca gtcttaaaag tatagcttct
     2461 tatattccag aaaaaatttt aagcaatgcc gatcttgaaa aaatggtaga taccaccgat
     2521 gaatggatca ctagacgcac aggtattaaa gaaaggcgca ttgctagtga aaatgaaaat
     2581 actagcgatt tgggcacaaa agctgcatta aaagccatag aaagagcaaa tttaaaacct
     2641 gaagatattg atgcgattct tgtagctact ttaagtcctg attattttac tatgccttca
     2701 acggcttgta aaattgcttc aaatttagga cttgtaaata ttagcgcttt tgatatttca
     2761 gcagcttgtt ctggttttat ctatttgctt gaacaagcta aagccttagt agaaagtggt
     2821 ttgaaaaaaa atgttttaat cataggagct gaaaaaacaa gttcaattat ggattacaat
     2881 gacagaagta tttgcatact ctttggagac ggtgcaggtg ctggagttgt aagtttggat
     2941 aatgaaaatc atatccttga tgtacatact gcaagcaatg gtaattatgg agatctttta
     3001 atgactcaaa gatcgcaaaa atcaagccta tgtcaaacac tttctatgca aatgaaaggc
     3061 aatgaagttt ttaaaatagc agtaaacacg cttagtaatg atgttgtaga aattttagct
     3121 aaaaataaca ttttagcaca agaaattgat ctttttattc ctcatcaagc taatctacgc
     3181 atcattaaag ccgtccaaga aaaactcaat ctaagcgatg aaaaatgtgt gatcactgta
     3241 caaaaatatg gcaatacttc agctgcttct atacctatgg caatgaatga tgcctatgaa
     3301 gaaggtcgac ttaaaaaagg aaatctgatc ttactagatg cttttggcgg tggttttact
     3361 tggggatctg cgcttttaaa atttggagga gagaattttt aattctctct tagctttcca
     3421 aaagcttgaa tttctaccaa ataaccctct gctaaagcac ttcctacaca agctctaaca
     3481 ggtttaggat aatttttaat ccaagcatca taaatttcat tcattgcatc aaaatcttgc
     3541 atattagcta accagatttg aatttgaatc aaatctcctt tgtttgcgcc tattttttca
     3601 aacaaagcat caagttctgc aagcgcttct ttagtttgtt ttttaatatc tccgctaggt
     3661 tcaaaagcca cttgtcctgc agtcttaaaa tatttatcaa aaacaataat ttgcgacatt
     3721 ctatcgcact catcaaaacg ctttatcatg catattttcc ttgaaattct ttcataaatt
     3781 cacacaaggt ttttacctga tccaaattaa gcgcattata aatacttgca cgaattcctc
     3841 ctaaaattct atgtccttta agtcctatca ttccagcttc ttcggcttcc tttacaaaaa
     3901 gaggctctaa atctttattt ttagcaatat taaaactcac attcattaaa gatctatcct
     3961 ttttatctgc atgtccttta taaaatccat tacttaaatc aatacattca taaagcatag
     4021 tagctttttg agaatttttc tcatgcactt tatcaagccc accttgattt aaaagccaat
     4081 ccatttcaag attaaacata taaatggcaa aggttggagg cgtgttaaac aaggactgat
     4141 tctcagcatg agtcaaataa tttaacatac taggaatttg tttattttta gatctttcta
     4201 acatatcttt acggataaaa atacaactta aacccgaaat tccagcattt ttttgcactc
     4261 cgccataaaa aagagcaata tttgaaaaat ctacttttct agaaaaaaaa tcactcgatg
     4321 catccacaat caaaggagtt ttagttttag gataattttg atattgagtg ccgtaaatag
     4381 tattgttaga acaaatataa gcataatcag cattatcgct aaattccact ctaggaatat
     4441 gatcgaaatt actttcctca ctacttgcta cggttttaac attgacacct aaaatttgtg
     4501 cttctttaat cgcttttttt gtccaaactc ctgtatttgc atattcacaa accccattta
     4561 aagctaaatt cataggaatc atagcaaatt gcaaacttgc tccaccttgt aaaaataata
     4621 cttcataatc atcatttaac tcgtaaagtt ttttagcttt ctcttgtgct ccaaaatgca
     4681 cttcttcaaa tacttttgtg cggtgagaaa tttccattat agaataaccc ctaccctgat
     4741 aatcacagag ttctttttga gcttgctcta aaatttctaa aggtaaagtc gatggccctg
     4801 cactgaaatt gatttttctc ataatctatc cttataaaat ttttgcttct ttttgagaag
     4861 tttgagaact taaaataacg atatcatcac tcttaagatc ttctaaattt gctattttac
     4921 cattttttct gatacaaata aactttttgc ttttattaaa aaaattctca tgttgcaaat
     4981 aagcattttg caatttatct aattttaatt cattataacg catttgattt gccaatagat
     5041 gatttaattg cttttctata ttatggcttt gttttatttt ttcatctatt atttttggca
     5101 aagaattaaa tttgaaaaat ttgcttaaat ttaaaagcaa attttcataa ttttgtattt
     5161 tataattcca aagttgcatt aatttttctt ccattaaatc caaactttgc tctatatcca
     5221 acttagaata aaacaaagta tctatagcag ctgaaggcgt tggagctcta aaatctgcaa
     5281 caaaatcact aataacataa tcaatctcat gtcctatggc tgaaataata ggagtttttg
     5341 ctttaaaaat ctctcttgct aaattttcat cattaaaaca aaaaagatct tccctgcttc
     5401 ctccaccacg tgctataata agaacatcta aatccatatc atcggctttt tttaaagctt
     5461 gtataagaga aaaaggagca ttatttcctt gagttaaagc atcaaaaata taaatttttg
     5521 ccaaaaaata ttctttttga tgaataagtt ttaacatatc ttgcaaagca gcagaagttt
     5581 ttgaagttat aatacctact tttttaggaa attttggcaa agatttttta aagcgtggat
     5641 caaaaagtcc ttctttttgc aaacgctctt ttaaagccaa aaactgtgct tccaaatccc
     5701 caaaacctgc ttttttcata ctagtagcga taaattgata acgaccgctt tcaggatata
     5761 aactcacact tccacaaagc tctaaaaaat cccccaccgc tggtttaaac ccgactttta
     5821 aattagctcc tttaaacata gcacaagcaa tgcttgatct ttcatctttt aaatcaaaat
     5881 accaatgccc tgaaccatgc aaagtaattt ttgaaatttc tccacttaaa actatatcat
     5941 caaaatgtgt ttctaataaa gcctttgctt taagatttaa ttctgttggt gtcatagttt
     6001 ttttgctata aacattgaac tcacgccaaa gctaaaactt ttataatcaa gcatttcaaa
     6061 accagcattt ttaagttcta agatgaattc tttcttactt aaaaatcctt caatagagtt
     6121 tggcaaatac tcataagcac ttttattttt actgattatc ccacctatac ttggtaaaat
     6181 atttttaaga taaaaatctc tacaagctgc tataaatcca cccttttctc tttttgtaaa
     6241 ttccaaaact accaaaatac catctttttg aagtactcta gcaaattcgc ttaaggcttt
     6301 ttgtctttct acaacattgc gaatgccata actaatactt aaaatatcta aactttgact
     6361 ttctaaaggt aaattttgcg cccctgcttt tataaattcg acatttggaa atttttcttt
     6421 tgcaacattt agcatgccac tacttggatc aataccttta atatttaaaa tatttttttc
     6481 catttttaaa gcactctctt gccaaatctc tatcatatcc cctgtgccac aggcaatatc
     6541 agcgattttt aaatcttttt ttaaatacaa actcatcact ctttgacaag cttttttgcg
     6601 ccacgctaca tcagctccaa agcttaaaat tctattcgcc ttatcataag taggtgcaat
     6661 ttgattaaac atttctataa ttttttcttg tttttgcatt tttatccttt gtaaattttc
     6721 aaatttttac ttgatttttt aagcaatttg caaaatttat ttttattatt gattattttg
     6781 gaaaaaatat ttttatccct atctttggaa tatttttcat aaagtttgtt
//
LOCUS       DAPIYB010000083         6429 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.084, whole genome shotgun sequence.
ACCESSION   DAPIYB010000083 DAPIYB010000000
VERSION     DAPIYB010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6429
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.084"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            79..741
                     /gene="sodB"
                     /locus_tag="RJ318_001454"
     CDS             79..741
                     /gene="sodB"
                     /locus_tag="RJ318_001454"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HDV7431304.1"
                     /translation="MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKD
                     TEFAGKDLVSIIKTSNGGVFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAA
                     LEKEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDKVPL
                     LVVDVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYEWALKEGMGSVSFYANELHP
                     VK"
     gene            810..1500
                     /locus_tag="RJ318_001455"
                     /pseudo
     CDS             810..1500
                     /locus_tag="RJ318_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881173.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
     gene            complement(1513..2718)
                     /locus_tag="RJ318_001456"
     CDS             complement(1513..2718)
                     /locus_tag="RJ318_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase family protein"
                     /protein_id="HDV7431305.1"
                     /translation="MKNLLIIGAGGVSRVATVKCAMNSDTFSKITLASRTKSKCDEIA
                     AFIKERLGVQIETAQIDADDSNAVVELIKKTEAQILLNVALPYQDLSLMDACIKARID
                     YIDTANYEHPDLAKFEYKEQWARNDEFKQAGILGLLGSGFDPGVTNVFCAYAQQNLFD
                     EISYIDILDCNAGDHGYAFATNFNPEINLREVSAKGRYWENGKWIETQPMEIKMEWDY
                     PEVGVKDSYLLYHEELESLVKNIKGLKRIRFFMTFGQSYLTHMKCLENVGMLGIKPVI
                     HQGKEIIPIEFLKTLLPDPASLGPRTKGYTNIGCVIRGKKDGKDKQVYIYNVCNHEEC
                     YKETGAQAVSYTTGVPAMIGTKLIAKGIWQGKGVFNMEEFDAKPFMEELNSQGLPWKI
                     IEMTPSLGE"
     gene            complement(2760..3668)
                     /locus_tag="RJ318_001457"
     CDS             complement(2760..3668)
                     /locus_tag="RJ318_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDV7431306.1"
                     /translation="MMLEIKNLSKNFGKIQALENINLHVKEGEFLSILGGSGSGKSTL
                     LRIIAKLEQASSYDLFSCKGEVALMFQNYALFPHLNVEKNILFALYDKKDKNQILNHL
                     LKTFEIEDLRYKKIDEISGGQAQRVAFARAMARGCKLLLLDEPFSNLDQNLKQDLRRE
                     LKKMIENQGITAIMVTHDIEDAYCMSDQIAFLEKGKILAHANPKELYFKPDFKSAQIL
                     PDLNIIEEKLDLEDEFFAWIASKNYIFGYAELKIGNRFEAKILQKEFLGAFCRLKLLY
                     KNIIFFILVSSSYDLEEKISFDIINF"
     gene            complement(3652..5268)
                     /locus_tag="RJ318_001458"
     CDS             complement(3652..5268)
                     /locus_tag="RJ318_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDV7431307.1"
                     /translation="MYKTLKYYKLGAILLALFLALPIFGIFAELFYILFQNFNTSDLT
                     QFSSIKENLSHFFDYLFLKFIKDTFIISMGVLCLSLILGVSSAYLIANYDFYFCKILE
                     KLLILPLAIPAYILAFVYVGIMDFQGFFHENFGFRIDFFNHYGVIFVLAISLYPYIYL
                     FAKTAFKSEAKEAYEVAKIMKYSEFRIFTRVALLSARPAIFSGALLVLMETLSDYGAS
                     AYLGVDTFSAGIFKLWYDLNDSYSSSVLSGILMLFVFLIMYVDYYYKNKHHYSFNQNL
                     ALFIKKRKLNPIKQILSCIYCFMIAFVGFILPFIWLVYWGLKDHKLFESQFYIISFQT
                     IILALITALITTFLAYFLMFSSRIVKNHFFNLFILKISSLGYSIPAAALGISIIVLFV
                     FLDKFFHMSLLGNSLLVLVFAYIIRFLASAIYSLEGGYNKIHLNIDEASLNLRTSYFI
                     LFFKIHTPLMKHFLFLAFIIVFIDTIKELPLSRILAPFGFETLSVKAFWFASDERIYD
                     AALPSLFIVFLSLMVVVWMDKITRKDDVRN"
     gene            complement(5268..6272)
                     /locus_tag="RJ318_001459"
     CDS             complement(5268..6272)
                     /locus_tag="RJ318_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV7431308.1"
                     /translation="MKKIFFMFLTAVSFLGASELNIYSARHYNADFEIIKKFEEKTGI
                     KVNHTQAKASELIKRLSLEGSNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIP
                     AHLRDKDKEWFAITKRARIIAYNKNTNIDISKMKNYEDLAKAEFKGEIVMRSATAPYS
                     KTLLASIIANDGNKEAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIG
                     LLKNSKNPKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSP
                     EIQKILTDSNYEFPIRNDVELSQTVKDFGTFKEDQIPVSKIAENIKEAVKIYDEVGFR
                     "
     gene            complement(6269..6400)
                     /locus_tag="RJ318_001460"
     CDS             complement(6269..6400)
                     /locus_tag="RJ318_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDV7431309.1"
                     /translation="MSMKKIILFLLCVGFAFACSEHSHTDFKDLNKTEYNSQLKDKI"
BASE COUNT         2333 a         1060 c          851 g         2185 t
ORIGIN      
        1 gcttttaaga tatttttact ctttttaata ttattatggt aatattttca atatcaaact
       61 aaaaataaag gagaaattat gtttgaatta agaaaattac cttatgatac caatgctttt
      121 ggtgattttt tgagtgctga aacttttagc tatcatcatg gaaaacatca caatacttat
      181 gttacaaatc taaataatct tattaaagat actgaatttg caggtaaaga tcttgtaagt
      241 attatcaaaa cttcaaatgg gggcgtattt aataacgcag ctcaagttta taatcatgat
      301 ttttattttg attgcattaa gccaagtaca ggctgtggct gtggcggttc atgtcaaagt
      361 atagatgcta atttacaagc ggcactagaa aaagaatttg gatctttaga aaatttcaaa
      421 gctgaattta tcaaaggcgc tacaggagtt tttggttcag gatggttttg gttagtttat
      481 aatactaaaa atcaaaaact agaatttgta ggtacttcaa acgcagctac accaattact
      541 gaagataaag ttcctttact tgttgtagat gtttgggaac atgcttatta tgtagatcat
      601 cgcaatgcac gccctgctta tttagaaaaa ttctatgctc atattaactg ggaatttgtt
      661 gcaaaagctt acgaatgggc tttaaaagaa ggcatgggat cagttagctt ttatgcaaat
      721 gaacttcacc ctgtaaaata actttaatcc tttttgtgct agaatggatt ttgacattaa
      781 gtcaacattc tacacaaaaa ggggcaaaaa tggataattc tttatctgca tatactcaaa
      841 aatatgacaa agaaggttat ggacttcaat atcctgatgg tcatgttata agattttacg
      901 agagaatctt aaaatacaaa ctaagcaaaa caagtggaaa attacttgat tttggttgtg
      961 gaaatggagt gcattctaag tattttaaaa atataaccgg gggggggtat agagccttat
     1021 ggcattgata tagttcctag tttaaaaaaa gtttgggaaa aagatccttg cttagattct
     1081 aaaaattttc acatcatatc tcctaattct agctttaaaa aactcttcaa tacaaaaatg
     1141 gattttatat ttgcaaatca aagcttatat tatcttacaa aacaagcttt taaagaagct
     1201 gtgcaagaat tttatgaact atgcaatgaa ggagctatta tatttgcaac catgatgagc
     1261 gataaaggct atagtatgta tgaaagagga gaacttatgg ataatagctt gcgtgaagta
     1321 aaaggatgtc caagtggtag attgagtggt tcttcatata tacgctttac taaagacata
     1381 gaagaattaa aagaagattt taaacctttt aaacctttat tttggggaga ttatgaatta
     1441 attaatctgt ataattttga aggcagtgtg gagcacttta tttatatagg acaaaagtaa
     1501 gtgctctagc acttactctc ctaagcttgg agtcatttcg ataatcttcc aaggaagtcc
     1561 ttgagaattc agctcttcca taaaaggctt agcgtcaaat tcttccatat taaacacgcc
     1621 ttttccttgc caaattcctt tagcgattaa tttcgtacct atcatagcag gaacacctgt
     1681 agtatagctc acagcttgcg cgccagtttc tttgtaacat tcttcatgat tgcaaacatt
     1741 ataaatataa acttgtttgt cttttccatc ttttttacca cgaatcacgc aacctatatt
     1801 ggtataacct ttagtgcgtg gtcctaaact tgcaggatca ggaagcaagg tttttaaaaa
     1861 ttctatagga atgatttctt taccttggtg tatcacaggt ttaatcccta gcattccaac
     1921 attttcaaga catttcatgt gagttaaata actttgtcca aaagtcataa aaaagcgtat
     1981 tctttttaaa cctttgatat tttttaccaa gctttcaagt tcttcatgat aaagcaaata
     2041 gctatctttc actcctactt ctggataatc ccactccatt tttatttcca taggctgcgt
     2101 ttctatccac ttgccatttt cccaataacg ccctttagca gaaacctcac gcagattgat
     2161 ttcagggtta aaattcgtcg caaaagcata gccatgatca cctgcattgc aatctaaaat
     2221 atctatataa gaaatttcat caaataaatt ttgctgtgca taagcacaaa aaacattagt
     2281 tacaccagga tcaaatccac ttcctaaaag tcctaaaatt cctgcttgtt taaactcatc
     2341 atttctcgcc cattgctctt tgtattcaaa tttagctaaa tcaggatgtt cataatttgc
     2401 cgtatctata taatcaattc ttgcttttat acaagcatcc attaaactca aatcttgata
     2461 aggcaaagcc acattgagta aaatttgtgc ttctgttttc ttgataagtt ctacaactgc
     2521 attgctatca tcagcatcaa tttgcgccgt ttcaatttga acccctaaac gctctttgat
     2581 aaaagcagcg atttcatcac atttgctttt tgttctacta gctaaagtga ttttactaaa
     2641 agtatcagaa ttcattgcgc attttacagt agccacacga cttaccccac ctgcgcctat
     2701 gattaaaaga tttttcattc ctatccttca aaaatttttt tgattttatc aaatttaaac
     2761 taaaaattga taatatcaaa acttattttc tcttctaaat cataacttga gctcaccaaa
     2821 ataaaaaaaa ttatattttt ataaagtaat tttagcctac aaaaagcccc taaaaattct
     2881 ttttgtaaaa ttttagcctc aaagcgattt cctattttaa gctctgcata accaaaaata
     2941 taattttttg aagctatcca agcaaaaaat tcatcttcta aatcaagttt ttcttctatg
     3001 atatttaaat caggtaaaat ttgtgcactt ttaaaatcag gtttaaaata aagctcttta
     3061 ggatttgcat gagctaaaat ttttcctttt tctaaaaaag cgatttgatc agacatacaa
     3121 taagcatctt caatatcatg agttaccata atagccgtaa tgccttgatt ttctatcatt
     3181 tttttcaatt ctcttcttaa atcctgtttt aaattttgat ccaaattaga aaaaggttca
     3241 tctaaaagca aaagcttaca tcctcttgcc atagctctag caaaagccac tctttgcgct
     3301 tgtcctcctg aaatttcatc gattttttta tatcttaaat cttcaatttc aaaagtttta
     3361 agcaaatgat ttaaaatttg atttttatct tttttatcat aaagtgcaaa aagtatgttt
     3421 ttctcaacat ttaaatgagg aaataaagca taattttgaa acatcaaagc cacttcacct
     3481 ttgcaagaaa acaaatcata agaactagct tgttcaagct tagcaataat ccttaaaagc
     3541 gtgctttttc cgcttccact acctcctaaa atgcttaaaa attctccttc tttgacatga
     3601 agattgatat tttctaaagc ttgtattttt ccaaaatttt tagataaatt tttaatttct
     3661 aacatcatct ttccttgtga ttttatccat ccaaacaaca accattaaag aaagaaaaac
     3721 gataaacaag gaaggcaaag ctgcatcata aattctttca tcacttgcaa accagaaagc
     3781 tttaacactt aaagtttcaa agccaaaagg cgctaaaatt ctacttaaag gaagttcttt
     3841 aatcgtatca ataaaaacaa taataaaagc caaaaataaa aaatgtttca ttaaaggtgt
     3901 gtgaatttta aaaaataaaa taaaataact cgttcttaaa tttaaacttg cttcatcaat
     3961 atttagatga attttattat aacctccttc taaagaataa attgcactcg ctaaaaaacg
     4021 aattatataa gcaaaaacaa gaacaagtaa agaatttccc aataaactca tgtgaaaaaa
     4081 tttatccaaa aatacaaaaa gcactataat gctaatccct aaagcagcag caggtataga
     4141 ataacccaaa gaacttattt ttaaaataaa taaattaaaa aaatgatttt taactatcct
     4201 agagctaaac atcaaaaaat aagctaaaaa agtggtaatt aaagcagtga ttaaagctaa
     4261 gattatagtt tgaaaactga taatataaaa ttgcgattca aaaagcttat gatcttttag
     4321 cccccaataa actagccaaa taaaaggtaa aataaaacct acaaaagcaa tcataaaaca
     4381 ataaatacag gatagaattt gtttaatagg atttaatttt ctttttttga taaaaagagc
     4441 taaattttga ttaaaactat aatgatgttt atttttataa taataatcca catacataat
     4501 caaaaataca aaaagcatta aaatacccga taaaacacta gaagaataag aatcattcaa
     4561 atcataccag agtttaaaaa ttccagccga aaaagtatcc actcccaaat aagcacttgc
     4621 accataatca ctcaaagttt ccattaaaac caataaagct ccagaaaaaa tggcaggtct
     4681 tgcactcaaa agtgccacgc gtgtaaaaat tctaaattca gaatatttca tgattttagc
     4741 tacttcataa gcctctttag cttcactttt aaaagctgtt ttagcaaata aataaatata
     4801 aggatataaa gaaatagcca aaacaaaaat aacaccataa tgattgaaaa aatctatcct
     4861 aaagccaaaa ttttcgtgaa aaaatccttg aaaatccata attcccacat aaacaaaggc
     4921 taaaatataa gcaggtatgg ctaagggtaa aatgagtaat ttttctaaaa ttttacagaa
     4981 ataaaaatca taatttgcaa tcaaataagc agaactcaca cccaaaatca agcttaaaca
     5041 caatactccc atgctaatta taaaagtatc tttgatgaat tttaaaaata aataatcaaa
     5101 aaaatgactc aaattttctt taatagatga aaattgggtt aaatcacttg tattaaaatt
     5161 ttgaaataaa atataaaaaa gttcagcaaa aataccaaaa ataggtaaag caagaaaaag
     5221 ggcaagtaaa attgccccga gtttatagta ttttaaggtt ttatacatta tctaaaaccg
     5281 acttcatcgt aaattttaac cgcttcttta atattttctg ctatcttact cacagggatt
     5341 tgatcttctt tgaaagttcc aaaatctttt accgtttggc ttaattctac atcatttctt
     5401 ataggaaatt cataattact atcagtaaga attttttgaa tttcaggact taacataaat
     5461 tccataaatt ttttagccgc atcttgattt ttacttgatt ttgtcatagc aataccgcta
     5521 atgttaatat gcgttcctct attgtcttga ttaggaaaaa taatacccaa agaattcccc
     5581 acttctacat cttttggatt tttagaattc tttaaaagcc ctatataata agtattcata
     5641 actgcaaatt tagcttcgcc tgcaaatact tgtctggctt gatctctatc cccacccttt
     5701 ggatttgtcg caagattttc aagcacacct ttagcccatg ctttagcctc tttatttccg
     5761 tcattagcta taatagatgc taaaagagtt ttgctataag gagctgtagc acttctcata
     5821 acaatttctc ctttaaattc agcttttgct aaatcttcat aatttttcat tttgctaata
     5881 tcgatatttg tgtttttgtt gtaagcaata attcttgctc tttttgtaat cgcaaaccat
     5941 tctttatcct tatctcttaa atgagcgggt ataaattctt ctaaatattt tgatgaaaca
     6001 ggggataaaa gtcctaaatt cttagcttct gtaagatttg aaatatcagc tgtgatgaaa
     6061 atatcagcag gagaattact tccttcaaga gaaagtcttt taataagttc tgaagcttta
     6121 gcttgagtat gattgacctt aatacctgtt ttttcttcga atttttttat gatttcaaaa
     6181 tcagcattat aatgtcttgc tgagtaaata ttaagctcac tagcacctaa aaatgaaaca
     6241 gctgttaaaa acataaagaa gatttttttc atattttatc ctttaattga gaattatact
     6301 cggttttatt aagatcttta aaatcggtat gagaatgttc agagcaagca aaagcaaagc
     6361 caacgcatag taaaaataaa attatttttt tcatagacat taattccttt tagatatttt
     6421 gataagaaa
//
LOCUS       DAPIYB010000084         6255 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.085, whole genome shotgun sequence.
ACCESSION   DAPIYB010000084 DAPIYB010000000
VERSION     DAPIYB010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6255
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.085"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..846
                     /locus_tag="RJ318_001461"
     CDS             <1..846
                     /locus_tag="RJ318_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S cluster-binding domain-containing
                     protein"
                     /protein_id="HDV7431310.1"
                     /translation="LSQLKKEHYKVLDFHLRKITPQAFLEIVEIHLAESCNLNCFGCN
                     HFSQIAEKEFPDIEIFKKDMQRLSEISKGIVGTFRLMGGEPLLNPNCIQFFDITRYFF
                     PKSAIWLVTNGILLDKQNEDFWNSCQRNKMQIRPTKYPIKINWDLIKDKCDQYDIPLI
                     FFNNGELEKTSWKFSLDPSGNCDNYHSFTNCSMANHCVQFKDGKLFTCTFPAHVQHFN
                     KKYGNHFEVCEFDFIDIYKAKDYQEILFFLSKPIPFCRYCKVSQWAEIGKWRSSNKTK
                     HEYLI"
     gene            856..3951
                     /locus_tag="RJ318_001462"
     CDS             856..3951
                     /locus_tag="RJ318_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HDV7431311.1"
                     /translation="MIKKILLITPELEYTGALNSFKRICEVLLNNKYAVDIWTYNEGP
                     YISEFDKLGVYVEVISEDDIDSKWVHERISKYSLVIANTIVVYKCVELIQNLTPVVWY
                     IREAENLPDFFWKPERKLALEKAKKLYVVSEYAKDFIIHNYNKNVEVLHNYVDDVFYE
                     KHDDFLKQIKSDKLKFLALGTIEKRKGYDVLLQAFIDLPVDIRDQCELHFAGRFWEGA
                     KDFFPKILSLAKKFPNIFYHGELRDRKKIHSLIFQCNVMVVPSRDESCSLVALEGAMM
                     SKPLILTENIGAKYILDENSGWLVKTGSVDSLKNAFIQAYKNKNKLDAMGANSRNNYL
                     QTSTYEIYEKNILKMVRDEICKNQYLYRINQENYVLFSFDIFDTLISRNIAKPSAVFL
                     IMKQKMRNMDFPLNLVKNFDRIRVEVEQYYYRNVCKNKYEDTNFDEIYNLLQQNFSLS
                     FQQKEELMKLEINTEKETLYPIKKNIELVEELIKNEKRVVLISDMYFSSSIIRTFLNK
                     FSPIFNNIPIYMSSEFRLKKNSGNLFKAILNLEKVDPKKWIHCGDNWVGDYLKPSNLE
                     ISTNFYINQLLPYEEFALNRNSLDMDLQKIIGISKKIRLENTLTNLQEIGVSFGAPML
                     LPYVQWILNIALKNSIRCLYFIARDGYVLQKMTDMLIQAKKINIKTKYLYGSRESWRE
                     PFRNKDKLKIQLIDEYLDQEIDKQEIFAFVECCGTGETLDYIVKRIESNQQFKNMFFG
                     SLYLYRSKLNKTKTQSLFMLPLNENYTYGIELFVRSLQGQVLGYDKKDGRVIPVFDFL
                     EGEALQKFRYDEYIDGVMLFMEYIVKTDNYEKIFDNMNVTILYLNYLSNNYIDKKFIE
                     IMGNVPFILNGVKDRVGIFAPRLNNKITLDQKNSFFNWSVLRSCKDIRVKYNMDNDCY
                     FGLIGAVDIIKSHLSYKLGKVILLNIKNPLKWIKLIVLIPILIFSHHEQKKIYLTEKK
                     INIDLSFYKDYNEAIMVRNFFSYQLGELILKTSRKWNVLAIVILPYKIAQLYRKKFKK
                     G"
     gene            3954..5702
                     /locus_tag="RJ318_001463"
     CDS             3954..5702
                     /locus_tag="RJ318_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein CapA"
                     /protein_id="HDV7431312.1"
                     /translation="MDNSKPLIIAGRDDGFGERMRALLNALYISKKFGFKFGFVWRDI
                     NNIQNLLDGKVLIPWANLPTREYLFDQDFIKSYYRQDIEFAYETPVLWSLYRQSIKNI
                     LKKPYEKEWGWYSTQGDLSEYFTDVDEGEYRTELVSCWKQIDFSSHVKKIFEKAHSKF
                     LDIGKFVAIHIRTGEVIHDEFYRNILYHCRYKIFPYPFALEIALKEIKKGHRVIFFGD
                     DLNLIQNLKEYCSFNKQAQENIFSIDDIIAFEQLDNGYDRLLFELVLMSKSEYIFGSG
                     TTGFSRCASWIENKIFINIFDHLSLIEQYEIILKYIDIENIDDLYRSCNYFFLFLLSE
                     QLNLNFDIKLRYLSKSLRYDSGSLNSEVFYINLLLQNEKFKEADDRLEQVICKNKKKF
                     FDLLLGYGQNPTFPYDIYMNYYFKDFDQYSNIFYVACRIFSEFNIPESRVNTYYPNFH
                     PIIFDQFKMFIFKDLPKSDQEIGAVKKIRNHLAYKLGVAAIKNSKSLWGYIRMPYVLS
                     YIRDMHKESQNKMDKKSISLEYYSDYESALKEKEGFVYKLGQIIIKAHKNWHKGGYIM
                     LWFEVKKLKKEFKKGK"
     gene            5702..6247
                     /locus_tag="RJ318_001464"
     CDS             5702..6247
                     /locus_tag="RJ318_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HDV7431313.1"
                     /translation="MAIEFDIQESKILKGVYIITPNKFRDLRGEIWTAFTDEYLSKLV
                     PDGIKFKHDKFINSHFNVLRGIHGDVKTYKLVTCVYGEVHQVVVDCRKDSPTYLKWEK
                     FIISYKNQQLILLPPNMGNSHYVSSKEAVYYYKLAYEGEYMDAPDQFTYAWNDERIGI
                     DWPTNTPILSDRDILATKNKG"
BASE COUNT         2334 a          623 c         1048 g         2250 t
ORIGIN      
        1 ttatcgcaat taaaaaaaga gcactataaa gtattagatt ttcatttaag aaaaattaca
       61 cctcaagctt ttttagagat tgttgaaatt catttagccg aatcatgtaa tttaaattgt
      121 tttggttgta atcatttttc acaaatagct gaaaaagaat ttccagatat agaaattttt
      181 aaaaaagata tgcaaagact ttcagaaata tctaaaggta ttgtcggaac ttttagattg
      241 atgggtggcg aacctctttt aaatcccaat tgtatacagt tttttgacat tacaagatat
      301 ttttttccaa aaagtgccat ttggttggta actaatggta ttttacttga taagcaaaat
      361 gaggattttt ggaattcatg ccaaaggaat aaaatgcaaa ttcgtccaac aaagtatcct
      421 ataaaaatta attgggattt gattaaagat aagtgtgatc aatatgatat ccccttgata
      481 ttttttaaca atggagagtt ggaaaaaact tcttggaaat tttctctaga tccttctgga
      541 aattgtgata attaccatag ttttacaaat tgtagtatgg caaatcactg tgttcagttt
      601 aaagatggaa agctatttac ttgtaccttt cctgcacatg tacagcattt taataaaaag
      661 tatggaaatc attttgaagt ttgcgaattt gactttattg atatttataa agccaaggat
      721 tatcaagaaa ttttattttt tctttctaag cctattcctt tttgtagata ttgcaaggta
      781 tcacaatggg cagaaattgg aaaatggcgt tctagcaata aaacaaaaca tgaatattta
      841 atttgaaagt gtattatgat aaaaaaaatt cttcttatta ctccagaact agaatataca
      901 ggagctttaa atagttttaa aagaatatgt gaagtattat tgaataataa atatgctgta
      961 gatatttgga cctataatga aggaccttat attagtgagt ttgataaatt aggcgtatat
     1021 gttgaagtta tttcagaaga tgatattgat tctaaatggg tgcatgaaag aatttcaaaa
     1081 tattcattgg tcatagcaaa tactatagta gtatataaat gtgttgagtt gatccaaaat
     1141 ttaactcctg ttgtttggta tattagagag gctgaaaatc ttcctgattt tttttggaag
     1201 ccagaaagga agttggcttt agaaaaagct aaaaaacttt atgtggttag tgagtatgca
     1261 aaggatttta taattcataa ttataataaa aatgtagagg ttttacataa ttatgtagat
     1321 gatgtttttt atgaaaagca tgacgatttt ttaaaacaga taaagtcaga taaattaaaa
     1381 tttttagctt tagggactat tgaaaaaaga aaaggttatg atgtgttgtt acaagctttc
     1441 attgatcttc cagtagatat aagggatcaa tgtgagcttc attttgctgg aagattttgg
     1501 gagggagcta aagatttttt ccccaagatt ttatcattag ccaaaaaatt tccaaacatt
     1561 ttttatcacg gggaattaag agatagaaaa aaaatacact ctttgatttt ccaatgcaat
     1621 gttatggttg taccatctag agatgaatcg tgctctttgg ttgcattgga aggtgcgatg
     1681 atgtctaaac cattgatatt aactgaaaat attggagcta aatatatttt agatgaaaat
     1741 agtggatggt tggttaaaac cggtagcgta gattctttaa aaaatgcttt tatacaagcg
     1801 tataaaaata aaaataagtt agatgcaatg ggtgcaaatt ctaggaataa ttatcttcaa
     1861 acatccactt atgaaattta tgaaaaaaat attttaaaaa tggttcgaga tgaaatttgt
     1921 aaaaatcaat atttatatcg tattaatcaa gaaaattatg tacttttttc ttttgatatt
     1981 tttgacactt taatttctag aaatatagct aaacctagtg ctgtattttt aataatgaaa
     2041 caaaaaatga gaaatatgga ttttccttta aatttagtta aaaattttga tagaataaga
     2101 gtggaggttg agcagtatta ttatcgaaat gtgtgtaaaa ataaatatga agataccaat
     2161 tttgatgaaa tttataattt attacagcag aatttttctt taagttttca acaaaaagag
     2221 gagttaatga aactcgaaat taatactgaa aaagagacat tatatccaat taaaaaaaat
     2281 atagaattgg ttgaagagct tattaaaaat gaaaagagag ttgttttaat ttctgatatg
     2341 tattttagtt cttctattat tagaaccttt ttaaataaat tttcccctat ttttaataat
     2401 attccaatat atatgtcatc agagtttaga ttaaaaaaaa atagcgggaa tttgtttaag
     2461 gctatattaa atttagaaaa agttgatcca aaaaaatgga ttcattgcgg cgataattgg
     2521 gtgggggatt atcttaagcc ctcaaatttg gaaatttcta caaattttta tattaatcag
     2581 ttgcttccat atgaagaatt tgcattaaac cgtaattcat tagatatgga tttgcaaaaa
     2641 ataattggaa tatctaaaaa gataagactt gagaatacct tgactaactt gcaagagata
     2701 ggagtttcat ttggtgcccc tatgctatta ccttatgttc agtggatttt aaatattgct
     2761 ttaaaaaact ctattagatg tttatatttt atagcaagag atggttatgt attgcaaaaa
     2821 atgaccgata tgttaattca agcaaaaaaa attaatatta aaacaaaata cttgtatggt
     2881 tctcgagagt cttggagaga gccttttaga aataaagata agttaaaaat acagctaatt
     2941 gatgagtatt tggatcaaga aattgataaa caagaaattt ttgcttttgt tgagtgctgt
     3001 ggcacgggtg aaactttgga ttatattgta aaaagaattg aaagtaatca acaatttaaa
     3061 aatatgtttt ttggcagttt atatttatat cgtagtaaat taaataaaac taaaactcaa
     3121 tctttattta tgctcccttt aaatgaaaat tatacttatg gtatagaatt atttgttcgt
     3181 tcgttacaag gtcaggtttt aggatatgat aaaaaagatg gtagagtgat tcctgttttt
     3241 gattttttag aaggggaggc tttgcaaaag tttagatatg atgaatatat cgatggggta
     3301 atgcttttta tggagtatat agtaaaaact gataattatg aaaaaatctt tgacaatatg
     3361 aatgtaacta ttttatatct gaattattta agcaataatt atatagataa aaaatttatc
     3421 gaaattatgg gaaatgttcc atttattctt aatggagtaa aagatagagt gggtattttc
     3481 gctcctaggt taaacaacaa aataacatta gatcaaaaaa attctttttt taactggtct
     3541 gttttaagaa gttgtaaaga tattagagtt aaatataata tggataatga ttgttatttt
     3601 ggccttattg gtgctgtaga tattataaaa tctcatcttt cttataaatt gggtaaagtt
     3661 atacttttaa atattaaaaa tcctttaaaa tggataaagc tgatagtttt aattcctatt
     3721 ttaatttttt ctcatcatga gcaaaaaaaa atttatttaa ctgaaaaaaa aataaacata
     3781 gatttgagtt tttataaaga ttacaatgag gcaattatgg ttagaaattt tttttcctat
     3841 cagcttggag agcttatttt aaaaacatct agaaaatgga atgttttagc tatagtgatt
     3901 ttaccttata agattgcaca gctatataga aagaaattta agaaaggata ataatggata
     3961 attcaaaacc tctcataatt gcaggaaggg atgatggatt tggagagaga atgagagcat
     4021 tattaaatgc tctttatata tctaaaaaat ttggttttaa attcggtttt gtatggagag
     4081 atattaataa tattcaaaat ttattagatg gtaaagtatt gattccttgg gcaaatttgc
     4141 caactagaga gtatttgttt gatcaagatt ttattaaaag ttattataga caagatatag
     4201 aattcgctta tgaaacacca gtattgtgga gtttgtatag acaaagcatt aaaaatattt
     4261 tgaaaaaacc ttacgaaaaa gaatgggggt ggtattcaac tcaaggtgat cttagtgaat
     4321 attttacaga tgttgacgag ggcgaatata gaacagagtt ggtttcatgt tggaaacaaa
     4381 tagatttttc atctcatgtt aaaaaaattt ttgaaaaagc tcatagtaaa tttttagaca
     4441 ttggaaagtt tgttgctata catattagaa caggtgaggt tattcatgat gaattttata
     4501 gaaatatact atatcattgt agatataaaa tctttccata cccatttgct ttagagattg
     4561 ctctaaaaga aataaaaaaa ggacatcgtg ttattttttt tggagatgat cttaatttaa
     4621 tacagaattt aaaagaatat tgttctttca ataaacaagc tcaagaaaat attttttcaa
     4681 tagatgatat catagctttc gaacaattag ataatggata tgatagatta ctttttgaat
     4741 tggttttaat gtctaaatct gagtatatat ttggttctgg gacaacagga ttttcaagat
     4801 gtgctagttg gatagaaaat aaaattttta tcaatatatt tgatcatttg tcgctcattg
     4861 aacaatatga gattatttta aaatatattg atattgaaaa tattgatgac ttgtatcgat
     4921 cgtgcaatta ttttttcctt tttttacttt cggaacaatt gaatttaaat tttgatataa
     4981 aattaagata tttaagtaaa tctttaaggt atgattctgg tagcttaaat tctgaagtgt
     5041 tttatattaa tttgttgttg caaaatgaaa aatttaaaga agcagatgat aggttggagc
     5101 aagtaatttg taaaaataaa aaaaagtttt tcgacttatt gctaggatat ggccaaaatc
     5161 caacttttcc ttacgatatt tatatgaatt attattttaa agattttgat cagtatagta
     5221 atattttcta tgttgcatgt aggatttttt ctgaatttaa tattccagaa tctagggtca
     5281 atacttatta tcctaatttt catcctataa tatttgatca atttaaaatg tttattttta
     5341 aagatcttcc taaaagcgat caagaaatag gtgctgtaaa aaagattcgt aatcatttag
     5401 cttataaact tggcgttgct gctattaaaa attctaaatc tttatgggga tatataagga
     5461 tgccatatgt tttgtcttac ataagagata tgcataaaga aagccaaaat aaaatggata
     5521 aaaaatctat tagtttagaa tattattctg attatgagtc ggctttaaaa gaaaaagagg
     5581 gttttgttta caaattagga cagattataa tcaaagctca taaaaattgg cataaaggag
     5641 gatatattat gttgtggttt gaggttaaaa aattaaaaaa agaatttaaa aaaggaaaat
     5701 aatggcaata gaatttgata tacaagaatc aaaaatttta aaaggagtgt atattataac
     5761 tcctaataaa tttagagatt taagaggtga aatttggaca gcttttacag atgaatattt
     5821 aagcaagttg gttccagatg gaattaaatt taagcatgac aaatttataa attcccattt
     5881 taatgtttta cgtggaatac acggagatgt gaaaacttac aaacttgtaa cttgtgtcta
     5941 tggagaagtg catcaagttg tggttgattg cagaaaagat tccccaactt atttaaaatg
     6001 ggagaaattt attataagtt ataaaaatca gcaacttatt ttattaccac caaatatggg
     6061 aaattctcat tatgtgagtt caaaggaagc agtgtattat tataaacttg cttatgaggg
     6121 ggaatatatg gatgcacctg atcaatttac ttatgcatgg aatgatgaaa gaattggtat
     6181 agattggcca acaaatacgc ctattctttc cgatcgcgat attcttgcaa ctaaaaataa
     6241 aggataaatt atgga
//
LOCUS       DAPIYB010000085         6123 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.086, whole genome shotgun sequence.
ACCESSION   DAPIYB010000085 DAPIYB010000000
VERSION     DAPIYB010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6123)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6123)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6123
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.086"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            13..780
                     /locus_tag="RJ318_001465"
     CDS             13..780
                     /locus_tag="RJ318_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431314.1"
                     /translation="MKMRYCFILFLSLVLSSNLLANNFSQKKVIKIEKSADSFEVIDL
                     NQNVANPNLNQQKALFDSSTLIEKKSQITKDKDIDFAIVLTSRKNFGYFLDGFRVSDK
                     EFSTLFAKNLIQSLKLNWVNSAANGIYQSPKTLSYFSPKDAKLINVSPFLTQEKDKAK
                     MYAKFTDYVVVVNLQDFYVNITNYFITTSKEGVASVNFKIISTSNGKILAAKNAELNL
                     TLKDQDAKQNYQDIINQMPKMLADVIKNQIFHLKLLN"
     gene            complement(784..2538)
                     /locus_tag="RJ318_001466"
     CDS             complement(784..2538)
                     /locus_tag="RJ318_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431315.1"
                     /translation="MFDKIHYYYFNANYEKCLNLSEQFLKKSPKFALEFATLSSYKLS
                     LFQKALYYAQELFSLNPTSFNGLMLAKSYIENLRLDEALNLLQTLLTRKDDLEDELKL
                     ELAFIYKLSNKLEESEQIFKELLSKDMYNLNLWKNYAEIYFKHDFTKTLNAHEHLCHF
                     MQDLIDKLQKGIIAEQTNLNLVKLEDRLHSKTKENLTISKIEDFLTHQILPQKAYLLF
                     KLFRISDSLELFQSLQEANQHHAQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATY
                     QFDLAYLLMRMGVDDNFEEGKKYYESRLFYAHNETFSTYHYNESLKAFNKFGVDAFKN
                     KEVLVFCEQGFGDTIMYARCLEKLCKIASKVLFAPQSAMYEMFKNQIKFLNQNDDIFK
                     NVKVLKNLPTNFDYAIPICSLPFFIDIKLDEILRLKTPILPQKKPHNQRKKLGIFYAT
                     PNAENSDLLRNVKFEFLFDVLKDLDYEIISFQMQLKEELPKVIEDRSKLIKNWNDTLN
                     YLYDIDCMLSIDSAIAHLSLAMDIPTIVLLHPRFDWRWGKFENPKSYFWPKAKCFIIK
                     EQEETKRNLQKLIKDILN"
     gene            complement(2740..6104)
                     /locus_tag="RJ318_001467"
                     /pseudo
     CDS             complement(2740..6104)
                     /locus_tag="RJ318_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345045.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         2050 a         1007 c          806 g         2260 t
ORIGIN      
        1 tagtttataa ggatgaagat gaggtattgt ttcattttgt ttttaagttt agttttaagt
       61 tctaatcttt tagcgaataa tttttctcag aaaaaagtta ttaaaattga aaaaagcgca
      121 gatagttttg aagtaataga tctaaatcaa aatgttgcaa atccaaatct aaatcaacaa
      181 aaagcattgt ttgatagttc taccttgatt gaaaaaaaat cgcaaatcac caaagataaa
      241 gatattgatt ttgccattgt attaacttct aggaaaaatt ttggttattt tttagatggt
      301 tttagggtga gtgataagga attttctaca ttatttgcta aaaatttgat tcaaagttta
      361 aagcttaatt gggttaattc tgctgcaaat ggtatttatc aaagtcctaa aactttgtca
      421 tattttagcc ctaaggatgc aaaacttata aatgtaagtc cttttttaac acaagaaaaa
      481 gataaggcta aaatgtatgc caaatttaca gattatgttg tggtggtaaa tttgcaagat
      541 ttttatgtaa atattacaaa ttattttatc acaactagta aagagggtgt ggctagtgtt
      601 aattttaaaa ttatttctac aagcaatgga aaaattcttg cagcaaaaaa tgcagaatta
      661 aatttgacat taaaagatca agatgcaaag caaaattatc aagatattat aaaccaaatg
      721 ccaaaaatgc tagctgatgt tatcaaaaac caaattttcc acctaaagct cttaaactaa
      781 gctttagttt aaaatatctt taatcagttt ttgcaaattt ctttttgttt cttcttgttc
      841 ttttatgata aaacattttg cttttggcca aaaataactt ttaggatttt caaattttcc
      901 ccaacgccaa tcaaacctag gatgtaaaag aactatagta ggaatatcca tagctaaact
      961 taaatgcgct atagcactat caatactaag catacagtca atatcatata aataatttag
     1021 agtatcattc caatttttta taagcttgct tctatcttct attaccttag gcaattcttc
     1081 ttttaattgc atttgaaaag aaatgatctc ataatctaag tcttttaata catcaaataa
     1141 aaattcaaat tttacatttc ttaataaatc agaattttca gcattaggag tagcataaaa
     1201 aataccaagt ttttttcttt gattatgcgg ttttttctgt ggcaatatag gtgtttttaa
     1261 tcgtaaaatc tcatcaagct taatatcaat aaaaaaaggc aaagaacaaa taggaatagc
     1321 ataatcaaaa tttgtaggta gattttttaa aacctttaca tttttaaaaa tatcatcatt
     1381 ttgatttaaa aatttgattt gatttttaaa catttcatac atggcacttt gaggagcaaa
     1441 taaaaccttt gaagcgattt tgcaaagttt ttctaagcat cttgcataca ttatagtatc
     1501 gccaaagcct tgctcgcaaa atactaaaac ttctttattt ttaaaagcat caacgccaaa
     1561 tttattaaaa gcttttaggc tttcattata atgataagta gaaaaagttt cattatgagc
     1621 ataaaataat ctgctttcat aatatttctt gccctcttca aaattatcat ccactcccat
     1681 acgcatcaaa agataagcca aatcaaattg ataggttgca tgagaatcca agctaagaca
     1741 ttttttataa gcatgataag cttcttgata gtttgagtta aattctaata ccttagcata
     1801 gttttgccaa aactgtgcat ggtgttgatt ggcttcttgt agtgattgaa aaagttctaa
     1861 agaatcagat attctaaaaa gcttaaaaag caagtatgct ttttggggta aaatttgatg
     1921 agttaaaaaa tcttctattt tagaaatggt aagattttct ttggttttac tatgaagcct
     1981 atcttcgagt ttgactaaat taagattggt ttgttcagca atgattcctt tttgtagttt
     2041 atcaatcaaa tcttgcataa aatgacacaa gtgctcatgt gcatttaatg tcttagtaaa
     2101 atcatgttta aaataaattt ctgcataatt tttccataga ttaagattat acatatcttt
     2161 agaaagcaat tctttgaaaa tttgttcaga ttcttctagt ttattactca gtttataaat
     2221 aaaagccaat tctaacttaa gttcatcctc taaatcatct ttgcgagtta aaagtgtttg
     2281 taataaattc aaggcttcat caagtcttaa attttcaata tagcttttag caagcataag
     2341 accattaaaa cttgtaggat ttaaagaaaa aagctcttga gcataatata aagctttttg
     2401 aaaaagagaa agtttataag aagaaagcgt agcaaattct aaagcaaatt ttggactttt
     2461 ttttaaaaat tgctcactca agtttaaaca tttttcataa ttagcattaa aataataata
     2521 atgaatttta tcaaacatat ttttccttga tggttacatt aaatccaata ttatcttata
     2581 agttgcataa aaagataatt atatttttat aaaattaaat aataaaacaa aaataaatac
     2641 aataaaaaca tccatcctaa taattttaaa attatcagga tgaaattttt aacaagtagg
     2701 agagtaaact aattaaacta agtattatct tttataagat taccaaagat aattaaactg
     2761 agcaaatcct gtatgggtat tgccatcttt atcaaacatt ccattatagc ttaaactaaa
     2821 atagaaagct tcattaacag gaacgataaa agaagtgctt acaaattttt gtactcttgg
     2881 taaatcaaac tcatcactta cttttatatt accaaatcta gcctcagctt ctactttagg
     2941 attgatatta aacttagctc caagttctac tgaagttttt aaattaggca accaatctct
     3001 aaaccaagta agacttgttt tagtagagaa aagatttaaa tagtttgcat aggttctttc
     3061 tccaccttta actgttgctt gtcctatggt gtctttcata gaaaaagctt cagtataacc
     3121 tccttcataa gcaagaccta tttcaggaga gaatatatct ttattagaaa taaaattcat
     3181 acctaaggct gtattgactc cataagcata agaattaggt tcagctttag cttcattatt
     3241 tcctattttt ttagttaaat catttttaat caaagcagct ttaccttgag ctttgatata
     3301 aacttcttga tctttttctg tagtaaataa ggtattaaag tattttaaac ctgcataata
     3361 ggttctatta ttaatatcaa aataagttga acccattttt gtatcttcat aacctgcata
     3421 cacaccatat attccactgt cttttaaagt agaataacct ataatggttc ctttagtgtg
     3481 tcctttactt tcttcattta aagaaagttc aacattctgt gaagaagtat aaggaaggat
     3541 gaataaagaa tgttctttat tagaaccata gcttccatta tttaaatcac tctttatata
     3601 atcacttgca tctgcatata aattaccctt ttcagacata gcgatgcttt gagatttact
     3661 tgaagaagct aaagcaaagc tttgcataga attacccata acattatcta taaaggttga
     3721 tcttcttgaa gtagtagaga ttaaagatct aaaggttgca cctgatatgg aagcattaag
     3781 attaaaatct gtagtaagct ttcctgttat tggatcatag cttaaagata tttctccact
     3841 tccattggtt cctatattgc caatattgtt ttgattaaca cctgagatga tgttgtttat
     3901 atcgtttagc tcttcaagat caacattgct ttgatctacg gtgatgtttt ctacttttac
     3961 attaaaagct ccacttccac ctataaccac agtgtttaat ttacctgtgt ttttatctgt
     4021 agaaacaagc caatctttga ttccaacact accactacca ttgttagtta ctgtattacc
     4081 attttcatct ttacctactg agccttgatt ggagatttca acttgtgctg atcctaaaac
     4141 agtgatgccg ttatttatgg ttgagccttg tgaattggaa atactagtgc ttccacttcc
     4201 tgaagaacta ataccgccac taatagttcc accattacta ttgctaatca ccatatcagc
     4261 actacctgta ctttcaatct taccaccgat attacctgaa ttagaaattt caagtttatt
     4321 atcactattg ttagtaatag aaccacttat acctgtagat gatgtagaag tgttagtgat
     4381 agaatcaagt ttactatctt tatctacagt aattgaacca gaaatagctc cattaccctc
     4441 attggtaatg gaatcaatac tactaccacc acttacttga acacttcctg agatacttcc
     4501 attaccttga ttaacaagac caccttctac cttagctcca ccttctatct tgatatcact
     4561 acctatagaa gcattacctg tattgattat atttccttca agtttagtgt ttttcccact
     4621 aacagtaata ccacctgtta tacttcctga gccagagtta gctatggctc gattcgaagt
     4681 agctgtaaca gttgctccat cttttatggt tatagagcct tctatttttc cacttcgatt
     4741 caatatacca acacctcttc caccttctac cctagaacct tcgccagata aaatcatttc
     4801 tccacttaaa gaggccgagt ttatcaatct tataccatcg atcttacctt ttataatgcc
     4861 gccattttta agttctattt tttgagtttg tgagttattc tctaataaaa ttccatgttc
     4921 ctcactataa attccactta ctgtgccatt atttgaacgt ccatctatat ataaatctcc
     4981 tagagtttgc gatcgaccca ctcctattgc cgtgtatttt gcataaactt gacctccatc
     5041 ttttatagta agtgttccaa atactccata agctgaacct ataccaacat tattactact
     5101 tatggttcca gtattgatta tatgctctat aaaaccacca tattctaata atatactaga
     5161 accccattct ccttcagcat gtataattcc tgtattttca acagttttta tatgctgaga
     5221 tgttaccatt atagcagaat gtcctccttt tattgtgcca ttgttaacaa gcttttctat
     5281 ggtagcattg ctacttatcc atataccatt attccattgt ccactaccag gggaattaat
     5341 aaaaccatta ttagtaaaag tatctatttt tgtatttata gccactccca cttctgagcc
     5401 ttgtatagtt ccgttgttat taaaattttt tatggttcct atgttgccta tatctacacc
     5461 cttatttgca ctaataaaac cactgttatt aaaggtttgt atgttggtat tctttccttc
     5521 aaaaaaactc ctttattgtt gtcaattatg gttccactat tgtcaaattt atctatatta
     5581 agagttcctg agttgttacc ccaaattccc atgtaaattt gtccattaat ttgacctgta
     5641 ttttcaaagg tgttgacagc aatagttcct gtaaaattac cattgttttc tataccaatc
     5701 ttaccattaa tagttctatt attagtaaga tttgcaagag taagagtgtt gctaccatta
     5761 gcatgggcat agatgatttt acctgtattg cctatgctac ctagagttcc acttgatccg
     5821 attgttaaag aatttgatgt tccatttcca gtaatagtta cttgttgatt gtgtaaagaa
     5881 tttatagtcg tattgatctt agcttgaggg ctataaacac ttgctgatct agttttaaca
     5941 tttttattaa cttcatcata agtttttatt tcagaattta atttagcatt agcacaactt
     6001 gccaaaaaag aaatagtagc taaagataaa actatctttt tagaatttaa acagggttct
     6061 ttgccctctc ctataggtat tttagttaat gtgatatttt tcataagatt ttcctccctt
     6121 tat
//
LOCUS       DAPIYB010000086         5884 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.087, whole genome shotgun sequence.
ACCESSION   DAPIYB010000086 DAPIYB010000000
VERSION     DAPIYB010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5884)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5884)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5884
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.087"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            15..1391
                     /locus_tag="RJ318_001468"
     CDS             15..1391
                     /locus_tag="RJ318_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDV7431316.1"
                     /translation="MQQEYYDLDLERAILSSCIMSEEAYASIAGDISPKDFSLKAHQD
                     IFKAVIACSNNKEPISVSFLRKHKKIDEQILAEILATPSMIDLPAYVNELHEKSVKRQ
                     LLSFAHLLPTRINEDRAVSEIADEIGKEIFSITNRVNSRDIKDVDMVISELFEEFKKQ
                     KTLENKGIIGLDTGFEGLNKMTKGFKGGELIIIAARPGMGKTTLCLNFIDKVLRQKKG
                     VALFSLEMPATQIMQRMLSSKTSIPLQKILTADLNDDEWERLGDACNDYSQKKLYIYD
                     SGYATIADVRAILRRLKSQDESIGLCVIDYIGLMMSNSNFNDRHLQVSEISRGLKLLA
                     RELDMPIIALSQLNRGLEQRANKRPLMSDLRESGAIEQDADAILFVYRDEVYREQEEK
                     ERENKAKAEGKAYQRLFIPNPMQENAEIIVGKNRNGPVGTIEVVFLKEKSCFVDKPIG
                     YETTEFTG"
     gene            1454..2056
                     /locus_tag="RJ318_001469"
     CDS             1454..2056
                     /locus_tag="RJ318_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431317.1"
                     /translation="MFYTFFVILKQGEKMLKQIAFGSIALTATGYGIKKLYEKLSKPE
                     RKFDTHAIVPSCKDVINTEEYKLKRELEIEQKKNQIQEFLCECMECYSGFSKYFNSKE
                     FLEFEQNFTSKNNHKTEFLLSSYKDQMIKVIDYAKKFKCLSAFLETQSEKNDLAVVKM
                     ISESMERKTQRFYLQTKFQTFPQYIFPSVWSSPMWDKQWE"
     gene            2047..2253
                     /locus_tag="RJ318_001470"
     CDS             2047..2253
                     /locus_tag="RJ318_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431318.1"
                     /translation="MGIILGILSLIAGFVAIVLMCGLYFIAFMVFVGIAILIFLSMQP
                     YPYNIIFCAIYLITILALVLWRKT"
     gene            2332..2397
                     /locus_tag="RJ318_001471"
     CDS             2332..2397
                     /locus_tag="RJ318_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001862547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3944 domain-containing protein"
                     /protein_id="HDV7431319.1"
                     /translation="MAYRYDKDLEFLKELSSPELD"
     gene            2559..3059
                     /locus_tag="RJ318_001472"
     CDS             2559..3059
                     /locus_tag="RJ318_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001964913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431320.1"
                     /translation="MSRWWSLYNEILRDVAKKFDVKFDENESTNSIETSLLCKLIEEE
                     LKNSQDENTLRELVNIFELGISNINKQTVVMGLQSLIKIGGFKSYQIAVIVANQVMKV
                     LLGRGLSLAANATLTRALSLFSGPVGWTIMTTWTALDLASPAYRVTIPAVLQIIILRL
                     KHNTKN"
     gene            3078..3575
                     /locus_tag="RJ318_001473"
                     /pseudo
     CDS             3078..3575
                     /locus_tag="RJ318_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108589.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4080..4544
                     /locus_tag="RJ318_001474"
     CDS             4080..4544
                     /locus_tag="RJ318_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431321.1"
                     /translation="MSVSIMELLGFGELIKLPLIDSSKKYHNKNKQQLRLFIIQEILK
                     ENQKTITQIIDIINNLIEQCNTNTQNLQELIKLLKLASKNNETFKEREKLLYCPEMLS
                     LITINNHLKEDDIQFIEQYYTYNQNTHEYERNDNLSSSDLEKLSNFFKLKNL"
     gene            4869..5150
                     /locus_tag="RJ318_001475"
     CDS             4869..5150
                     /locus_tag="RJ318_001475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431322.1"
                     /translation="MITYSNLSDVKKRIEDEFTHRNAECDKYDYLIAITCGAIAGIMD
                     IFLVGNPKDSYLGKKVDKTVEKMTQKFAQLCGWDKQKALDKNKDLTKSV"
     gene            5156..>5884
                     /locus_tag="RJ318_001476"
     CDS             5156..>5884
                     /locus_tag="RJ318_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431323.1"
                     /translation="MENKFKINYDQTTTNGRNGTNGKVDNLSMKNHHLKSIGHSPDIF
                     GLFVSIVNQFTNTSTFVSNGKIITIDTNTFELQGGNFIAKIFCGFFNWFGHLASDWCG
                     SSGGKERGAGIPMPFYNLFLLCDFGNFGQHRQTLAQIATQVFEQGYDLRHGVTMSIPV
                     MINKMLIRFMYIIKAKFYHKKEWKECIPKDDIPELNKMLLIGSGTFLLIDTGGAWIKS
                     KNPITNPVVFLSEINLINVIRFSTL"
BASE COUNT         2360 a          732 c          924 g         1868 t
ORIGIN      
        1 tataaggaaa tttagtgcag caagagtatt atgacttgga tttagaacga gctattttaa
       61 gcagttgtat catgagtgaa gaagcttatg ctagtatagc aggtgatatt agcccaaaag
      121 attttagtct taaagctcac caagatattt ttaaagcggt tatagcttgt agtaataaca
      181 aagagcccat ttctgtaagt tttttaagaa aacataaaaa aatagatgag caaattttag
      241 cagaaattct tgccactcct tctatgatag atttgcctgc ttatgtaaat gaacttcacg
      301 aaaagtccgt aaaaagacaa ctcttgagtt ttgcacatct tttgccaact cgtatcaatg
      361 aagatcgtgc tgtaagtgaa atcgcagatg aaattggtaa agaaattttt agcattacaa
      421 atcgtgtgaa ttctagagat attaaagatg ttgatatggt aatatcagaa ctttttgaag
      481 aatttaaaaa gcaaaaaact ttagaaaata aaggtattat agggcttgat acaggttttg
      541 aaggtctaaa taaaatgaca aaaggcttta aagggggtga acttataata atcgccgcgc
      601 gtccaggtat gggaaagaca actctttgtt taaatttcat tgataaggtt ttaagacaaa
      661 aaaaaggcgt ggctttattt tctcttgaaa tgcctgcaac tcaaatcatg caaagaatgc
      721 tatcttctaa aacttctatt cctttgcaaa aaattttaac tgcagattta aacgatgatg
      781 aatgggagcg tttaggagat gcttgcaatg attatagtca aaagaaatta tatatttacg
      841 atagtggtta tgcaactatt gctgatgtaa gggctatttt aaggcgttta aaatctcaag
      901 atgaaagtat aggactttgt gtgattgact atatagggct tatgatgagt aattcaaatt
      961 ttaatgatag acatttgcaa gttagtgaaa tttcaagagg acttaagctt ttggctaggg
     1021 agcttgatat gcctattatc gcactttcac aacttaatcg tggcttagag caaagggcaa
     1081 ataagcgtcc tttgatgagt gatttgcgag aaagtggagc tatagagcaa gatgcggatg
     1141 ctattttgtt tgtatatcgc gatgaggttt atagagaaca agaagaaaaa gaaagagaga
     1201 ataaagctaa agctgaaggc aaagcttatc aaaggctttt tataccaaat cctatgcaag
     1261 aaaatgctga aattattgtt ggaaaaaata gaaatggacc tgttggaact atagaagttg
     1321 tatttttaaa agaaaaatct tgttttgtag ataaacctat aggctatgaa actactgaat
     1381 ttacaggcta gctttaataa aataagtttt taatatttta aagttatttt ttacgacaca
     1441 acctgtcgca agggtgtttt atactttctt tgttatttta aaacaaggag agaaaatgtt
     1501 aaaacaaatc gcatttggca gtatagctct tacagctaca ggatatggca taaaaaaatt
     1561 atacgaaaaa ttatccaagc cagaaagaaa atttgataca catgctattg ttccaagctg
     1621 taaggatgta atcaataccg aagaatacaa actcaaaaga gagcttgaaa tcgaacaaaa
     1681 gaaaaatcaa attcaagaat ttctttgcga atgcatggag tgttatagcg gcttttcaaa
     1741 atattttaat tctaaggaat ttttagaatt tgagcaaaat tttacctcta aaaataatca
     1801 caaaacagaa tttcttttgt cgtcttataa agatcaaatg ataaaagtga tcgactatgc
     1861 taaaaaattt aaatgcttga gtgctttttt ggaaacacaa agcgaaaaaa atgacttagc
     1921 ggttgtaaaa atgataagtg aaagtatgga gagaaaaaca cagagatttt atctgcaaac
     1981 aaaatttcaa acttttcctc agtatatttt tccttctgtg tggagttctc ctatgtggga
     2041 taaacaatgg gaataatact tggaatttta agccttatag ctggctttgt tgccatagtg
     2101 ttgatgtgtg gtttgtattt tatagcgttt atggtttttg ttggcatagc gatacttatt
     2161 tttctttcta tgcaacctta tccttataat ataatatttt gtgctatata tttaatcaca
     2221 attttagcgc tagtgctatg gcgtaaaact taaaaatttc acttccccct tgactggggg
     2281 gggggatttg ataaaataca aagttaaaaa ttttaaaaac aaggagaaaa tatggcctac
     2341 agatatgata aagatttaga attcttaaaa gaattaagca gtccagaact cgattagctt
     2401 gtaaaaattt taacccatga taaagacggg aaagttcgtt ttactgaaga gttaaccaat
     2461 aatgatcttt ataaaaaaca ttatccagat cataaagaat atatcgaact cattttagaa
     2521 gaatttcaaa aatttggagg aaatagtatt cttaatatat ttcgaggtgg tggagtttat
     2581 ataatgaaat tctacgcgat gttgcaaaaa aatttgatgt aaaatttgat gaaaatgaaa
     2641 gcacaaactc catagaaaca tcacttttat gcaaattaat agaagaagag ttaaaaaatt
     2701 ctcaagatga aaatacatta agagaacttg taaatatttt cgaacttggc atttctaata
     2761 ttaataaaca aacagttgta atgggattgc aatctcttat taaaataggt ggatttaaaa
     2821 gctatcaaat tgcagtaata gttgcaaatc aagttatgaa agttttacta ggaagaggtt
     2881 tatctcttgc ggcaaatgca acacttacaa gagctttaag tcttttttct ggtccggtag
     2941 gttggacaat tatgaccaca tggactgcat tggatttagc tagcccagcc tatagggtta
     3001 ctataccagc agtacttcaa attataattt taagactaaa acacaataca aaaaactaaa
     3061 cacaaggaaa tgcattaatg gaaaatattt gccaatttat catagaaaat attgataaaa
     3121 attcattaaa tacaaaaaaa ataaaacttg ttttcaatat gcaagagcaa gaaattacaa
     3181 caatttcgaa gatatttaag gtatcttcgg aacacattat tgctttttat gatacctcaa
     3241 catcctttaa ttattttagc aaaactaccg gaatatgttt tactggcaaa gaagttatct
     3301 ttaaaagaaa agaagatgaa gttttaatga aaatcaacta tgaagatttc aaagaggcaa
     3361 ataaatcctt acctgaaaaa acaacaactc ttcaagacat caaatttccc atatcttttc
     3421 ataatcttgg aacatcttat ctttcatttg atgatttcaa aaagaaaaac tacatagaag
     3481 aaaatgatga gcttataata aattttttac acatcttaac ttcaaaaaat aacatagaaa
     3541 gttttaaaaa tgaaagtatg tttccacaag ccttagaaaa aacaaacgaa agtattaaag
     3601 aaaactatat aaaagttatc attaaaataa tattagatca atacggtttt ttagatgaaa
     3661 aaagatcaat caaaattttt gctctaatga ataaaattaa tgttgcttca gaaacaaggt
     3721 ataaaataca agatttttta cataataaac attctagttt tgaagatttg ctaaacatca
     3781 taaaacaaga atctagattt atgcaattca aatatatttt aatttcacta ataaaagact
     3841 taattgatat agattttgaa gataataaaa tttataattt tttgtatgaa aacaaagaca
     3901 tttttaaaat caaagacctt aaagaaatct attagataaa agaaatcatt aaaaaagaat
     3961 atcaaataat attagacgat aataaagaaa ttcagcaaat ttttaacttt atattcgaaa
     4021 cagctacaaa aaataatata tcattaaacg gtttatatct ttcaggaatg acaattggca
     4081 tgtctgtatc aattatggag ttactaggat ttggggaatt aataaaatta ccactaattg
     4141 attcttcaaa aaaatatcac aataaaaaca aacaacaatt acgtcttttt attattcaag
     4201 aaattctcaa agaaaatcaa aaaacaatta cccaaattat tgatatcatc aataatttaa
     4261 ttgagcaatg taatacaaat acacaaaatt tacaagaatt aataaaatta ttaaaattgg
     4321 cttcaaaaaa taatgaaact tttaaagaaa gggaaaaact tttatattgc ccagaaatgc
     4381 tttcattgat aacaataaat aatcatctaa aagaagatga tattcaattt atagaacaat
     4441 actataccta taatcaaaat actcatgagt atgagcgcaa tgacaatctt tcttcgtcgg
     4501 atttagaaaa actttcaaat ttttttaaat taaaaaatct ataaggataa ttttatggat
     4561 aaaatacaag aaaacaccaa aatagaaaag gctatattag ccgaaaaaca acaaatcttt
     4621 ttaatacaaa ataaattatc cgaaattgaa aaaaatatca aagaataatg tttaaccata
     4681 gaacagattc aaaatagtat cacagaaaaa aatcaaaatt tgagcaatat agaatataag
     4741 gaaaatcaat caatcgattc attggaaatt ttttttaaca cttatagcaa ttgggaaaca
     4801 tattgtcaaa aaattgaaaa atatttaaac ttaaaaaaat aaactcaaat gaagattctt
     4861 taaaattttt gatcacttat tcaaatttat cagatgttaa aaaaagaatt gaagatgaat
     4921 ttacccatag aaatgcagag tgcgataagt atgattattt aatagcaata acatgtggag
     4981 caatagctgg cattatggac atttttttag ttggaaatcc taaagatagc tatctaggaa
     5041 aaaaggtaga taagacggta gaaaaaatga ctcaaaaatt tgcacaatta tgtggttggg
     5101 ataagcaaaa agcattagac aaaaacaaag atttaactaa aagtgtatag cgtttttgga
     5161 aaacaaattt aaaattaatt atgatcaaac tactacaaat ggaagaaatg gaacaaatgg
     5221 aaaagtagat aatttaagta tgaaaaatca tcatttaaaa agcataggtc actctccaga
     5281 tattttcggg ttatttgtat ctatagtaaa tcaatttacc aatacttcaa cttttgtcag
     5341 caacggaaaa atcataacca tagatacaaa tacttttgaa ttacaagggg gaaattttat
     5401 tgctaaaata ttttgtggat tttttaattg gtttggacat ttagcatctg attggtgtgg
     5461 atctagtgga ggcaaggaaa gaggtgcagg cattcctatg cctttttata atttattttt
     5521 actttgtgat tttggaaatt ttggacaaca tagacaaaca ctagcacaaa ttgcaaccca
     5581 agtttttgaa caaggatatg atcttaggca tggagttact atgtctattc ctgttatgat
     5641 taataaaatg ctaattcgtt ttatgtatat aataaaagct aaattttacc acaaaaaaga
     5701 atggaaagaa tgtataccaa aagatgacat acctgaatta aataaaatgc ttttaatagg
     5761 atctggtact tttttattaa ttgatactgg tggtgcatgg ataaaaagta aaaatcctat
     5821 aacaaatccg gtagttttcc tttctgaaat caatttaatt aatgttataa gatttagcac
     5881 ttta
//
LOCUS       DAPIYB010000087         5875 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.088, whole genome shotgun sequence.
ACCESSION   DAPIYB010000087 DAPIYB010000000
VERSION     DAPIYB010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5875)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5875)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5875
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.088"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            67..762
                     /locus_tag="RJ318_001477"
     CDS             67..762
                     /locus_tag="RJ318_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDV7431324.1"
                     /translation="MTQEELDALMNGDVDLDSETEAEVKTEESNTEEDALMLEDVKIA
                     DYKPNPSVVWPPPPPNQEHKVVHQLDDVTKDSELKATEMMDKLESINNFFADSESLLK
                     EINKAIEKNIDIFSKLNEKFPNVESFSEALELNNQAKKSSKEIVGNLQSGQDEVMMAM
                     DAMQYQDIHRQKIERVINVMRALSRYMSSLFEGKIDDKKRVSSAVHIEGDSTADVVSN
                     DDIEALIASLGQK"
     gene            759..2012
                     /locus_tag="RJ318_001478"
     CDS             759..2012
                     /locus_tag="RJ318_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDV7431325.1"
                     /translation="MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREF
                     NYESFEEAIKYTHERGKKIYVTLNGFHLSSQIEGLKRHILKLREMKPDAFIVASVGAM
                     RLVKELAPEISLHVSTQANILNYLDAQVYKDMGAKRVVIARELGLKDAKALKENCDIE
                     LEAFVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEE
                     DENGTHIFNSKDLNLCSYIEKIMQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDAL
                     EGKFESSKYEKEIATLKNRGFTDGYLVSRPLEKTDTQNHNTSIEEGSHQVHAISEDGR
                     FFKCKGKIVLNTPYEILTPLGDVIQTCDNELGKIYQKEGKYFIEFKKLIAKNNKEFSE
                     IHSGNEHEIQLPNKISALSFLRKEI"
     gene            2013..2507
                     /gene="purE"
                     /locus_tag="RJ318_001479"
     CDS             2013..2507
                     /gene="purE"
                     /locus_tag="RJ318_001479"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDV7431326.1"
                     /translation="MNFVSILMGSKSDYETMKEAAKTLESFGVKYELIISSAHRSPKR
                     TKEYIANAEEKGVKVFIAAAGMAAHLAGAVAAYTTKPVLGVPMSGSNLASMDSLFSTV
                     QMPSGIPVGTLAIGKAGAINAAYLAMQILAIYDVDLAQKLKEDRLEKEKKLVSDSKEV
                     EVLL"
     gene            2517..3053
                     /locus_tag="RJ318_001480"
     CDS             2517..3053
                     /locus_tag="RJ318_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3972 domain-containing protein"
                     /protein_id="HDV7431327.1"
                     /translation="MQTYLELEEFCKLVHLNEDVVKGMMANGALNFKEEEGKIYIEAH
                     QGTFSVVPSSAKSQTAMVNSMTLAGESFVEKTIGTILNLHEKVLDAKDETLEALKNEN
                     KFLKDALYSMQELYDEDRKTIETLNNELKHAREEIEFLKRKYKLMWSKTAEIFGAKTE
                     PDLEMNKNLEKPIENMEQ"
     gene            3065..3928
                     /gene="glyQ"
                     /locus_tag="RJ318_001481"
     CDS             3065..3928
                     /gene="glyQ"
                     /locus_tag="RJ318_001481"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDV7431328.1"
                     /translation="MTFSQMILNLQNYWQEQGCAIMQPYDMPAGAGTFHPATFLRSLG
                     KKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFD
                     LKSHDIRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYG
                     LERIAMYLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFE
                     NSYKECKNILEQGLALPAYDYCMLAAHTFNLLDARGAISVAQRQDYMLKIRELSKNCA
                     EIYKKNLNEAE"
     gene            3915..4640
                     /locus_tag="RJ318_001482"
     CDS             3915..4640
                     /locus_tag="RJ318_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDV7431329.1"
                     /translation="MKLSEIYNFLDQLSPFNIQESWDNSGILLGDRDSEISTVYLSLD
                     IDENIIKEASENSLIITHHPLIFKGLKDLYDKTYPRAFIKEMIYKNISLISMHTNYDL
                     SHLNTYFTEEILGFKISFKDKFLIYVENSMSFEALCDWVKKKLNLQILRVSDCGKKDI
                     KRIVICTGSGGDLISKVDADCFLSGDFKYHQALEALSNQISLIDLGHFESERYFSQCL
                     AKDLKNLPLQVIITVSKNPFQYF"
     gene            4650..5366
                     /locus_tag="RJ318_001483"
     CDS             4650..5366
                     /locus_tag="RJ318_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HDV7431330.1"
                     /translation="MNKYLEQLVLLSKIDQEIDSYEPKIDSINKTLKDAELKIEKINA
                     DLEKIDEEIKDIENQKIQNNAHVSEFSAKIKDLSKKSGVVKTEKEANALKIEEDIAKE
                     QLDAANDEIVRLDKILENKETYKKELEEEKIKQEQNINEIRVSIKSEMEVLEKDRMSV
                     YDKKTKLVSEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGE
                     EIVTCPHCGRILYKEQEEQN"
     gene            5363..>5875
                     /locus_tag="RJ318_001484"
     CDS             5363..>5875
                     /locus_tag="RJ318_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HDV7431331.1"
                     /translation="MIFFYYFLTWTAFLFCAVFILLLSFLKSKYKISLKSRFFLYKNL
                     HQEKADVHFHACSYGEVRSIKALVLKFDSRITTITQTGFECAKEFCKKVNYLAFENFL
                     PFWLKPCKVLVIFEAEYWLMLVFMARIYKAKIILLNARISDKSYHSYQRFSFFYKKIF
                     SYIDEVFAQSD"
BASE COUNT         2178 a          671 c         1110 g         1916 t
ORIGIN      
        1 ttttagataa aattgattat aattttgagc aattattgaa aatctagatt taaaaaaggg
       61 aaaaaaatga ctcaagaaga gcttgatgct ttgatgaatg gtgatgttga tcttgattca
      121 gagacagaag cagaggtaaa aaccgaagaa tcgaataccg aagaagatgc tttgatgtta
      181 gaagatgtca aaatagctga ttacaaacct aatcctagtg tagtatggcc accaccccca
      241 ccaaatcagg agcataaagt tgtacatcag ttagatgatg ttacaaaaga tagcgagctt
      301 aaagcaacgg aaatgatgga taagcttgaa agtattaata atttttttgc ggattctgaa
      361 agtttactca aagaaataaa taaagcaata gaaaaaaata ttgatatttt ttctaaactt
      421 aatgaaaaat ttcctaatgt ggaaagtttc agtgaagctt tagaattaaa caatcaagct
      481 aaaaaaagtt ctaaggagat tgtcggaaat cttcaaagcg gacaagatga agtgatgatg
      541 gcaatggatg caatgcagta tcaagatata catcgtcaaa aaatcgaacg tgttattaat
      601 gtaatgcgtg ctttaagccg ttatatgagt tccttatttg aaggtaaaat tgatgataaa
      661 aaacgtgtaa gttctgcagt gcatattgaa ggtgatagta ctgctgatgt tgtaagtaat
      721 gatgatatag aagctttaat tgcaagttta gggcaaaaat gatcattcct gaaatagtag
      781 ctcctgcagg aaatttcaca aaattaaaaa ttgctttagc ttatggcgca gatgcggttt
      841 atgcgggtgt gaataatttt tctttaagat cacgcactgc aagagaattt aattatgaaa
      901 gttttgaaga agctatcaaa tatactcatg agcgtggtaa gaaaatttat gttactttaa
      961 atggttttca tttgagttct caaattgaag gtttaaaaag acatatttta aaattgcgtg
     1021 agatgaaacc tgatgctttt attgtagctt ctgttggagc tatgcgtctt gttaaagaac
     1081 ttgcacctga aatttcttta catgtttcta ctcaggcaaa tattttaaat tatttagatg
     1141 ctcaagttta taaggatatg ggtgctaaaa gggttgtaat tgccagagaa ttagggctta
     1201 aagacgctaa agctttaaag gaaaattgcg atattgaact tgaagctttt gtgcatggtt
     1261 ctatgtgttt tgcttattca gggcgttgtt taataagctc tgtgcaaagt ggaagaatga
     1321 gcaatcgtgg atcttgtgca aatgattgta gatttaatta tgagctttat gctaaaaatc
     1381 cagaaaatgg cactttattt cgcttagaag aagatgaaaa tggtactcat atttttaatt
     1441 ctaaagattt aaatctttgt tcttatatag aaaaaatcat gcaagaaaat tgtatcagtg
     1501 cttttaaaat agaagggcgt actaaaagcg aatattatgt tgcgcttaca acaaggactt
     1561 ataaaatggc catacaagat gctttagagg gtaaatttga gtcaagtaag tatgaaaaag
     1621 agattgctac acttaaaaat cgtggtttta cagatggcta tcttgtttcg cgtcctttag
     1681 aaaaaaccga cacacaaaat cataatacaa gcatagaaga aggttctcat caagtgcatg
     1741 ctataagcga agatggaaga ttttttaaat gtaaagggaa aatcgtttta aacacgcctt
     1801 atgaaatttt aaccccttta ggcgatgtga ttcaaacttg cgataatgaa ctaggtaaaa
     1861 tttatcaaaa agagggtaaa tattttatag agtttaaaaa acttattgct aaaaacaata
     1921 aagaatttag cgaaattcat agcggtaatg aacatgaaat ccaattacca aataaaatca
     1981 gtgcattaag ttttttaaga aaggaaatat agatgaattt tgtttctatt ttaatgggaa
     2041 gcaagagtga ttatgagact atgaaagagg ctgctaaaac tttagaaagt tttggtgtaa
     2101 agtatgaact tatcatctca tcagctcatc gtagtccaaa aagaacaaaa gagtatattg
     2161 caaatgctga agaaaaaggt gtgaaggttt ttatagcagc agctggaatg gcagcgcatt
     2221 tagctggagc tgttgcagct tatacaacaa aacctgtttt aggagtgcct atgtcaggaa
     2281 gcaatcttgc aagtatggat tctttgtttt ctacggtgca aatgcctagt ggaattcctg
     2341 taggaacttt agctattggt aaggctggag caatcaatgc tgcttatttg gctatgcaaa
     2401 ttttagctat ttatgatgtt gatttagcac aaaagcttaa agaagatcgt cttgaaaaag
     2461 aaaaaaaact tgtatctgat tcaaaagaag tagaagtttt attataaggg ataaaaatgc
     2521 aaacctatct tgaacttgaa gaattttgta aacttgtgca tttaaatgaa gatgtggtta
     2581 agggtatgat ggccaatggg gctttaaatt ttaaagaaga agagggtaaa atttacatcg
     2641 aagcccatca aggtactttt agtgtagtgc ctagttctgc aaaatctcaa actgcaatgg
     2701 taaattcaat gactttagca ggagaaagtt ttgttgaaaa aacaatagga actattttaa
     2761 atttacatga aaaagtttta gatgctaaag atgaaacact tgaagcatta aaaaatgaaa
     2821 ataaattttt aaaagatgcc ctttattcta tgcaagagct ttatgatgaa gatagaaaaa
     2881 ctatagaaac cttaaacaat gagttaaaac atgcgcgtga agagatagaa tttctcaagc
     2941 gtaaatataa attaatgtgg agtaaaactg cagaaatttt tggagctaag acagagcctg
     3001 atttggaaat gaataaaaat ttagaaaaac ctattgaaaa tatggaacaa taaagagaga
     3061 tacaatgact ttttcacaaa tgatacttaa tttacaaaat tattggcaag agcaaggttg
     3121 tgcgattatg caaccttatg atatgccagc aggtgcagga acctttcatc cagcaacttt
     3181 tttaagaagt ttaggaaaaa aaccttgggc agctgcttat gtggctccaa gtagaaggcc
     3241 tactgatgga cgttatggtg aaaatcctaa tcgcttaggt gcttattatc aatttcaagt
     3301 tttaattaaa cctagtcctg ataatattca agaattatat cttaaaagtc ttgaaaattt
     3361 gggttttgat ttaaaaagtc atgatattcg ttttgttgaa gataattggg agagtccaag
     3421 tttgggtgct tggggtttag gctgggaagt atggcttgat ggtatggaag ttactcaatt
     3481 tacttatttt cagcaagttg gcggtatagc agtagattta gtaagtgctg aaattaccta
     3541 tggtcttgaa agaatagcca tgtatcttca aaatgttgat aatgtttatg atatagtttg
     3601 gagtgaattt aatggagaaa aaattaaata cgcagatgtg cataagcaaa gtgaatatga
     3661 atttagtaaa tacaattttg aagtaagtga tgttaaaatc ttaaatgagc agtttgaaaa
     3721 ttcttacaaa gaatgtaaaa atattttaga acaaggacta gctttacctg cttatgatta
     3781 ttgtatgctt gctgcacata cttttaatct tttagatgca agaggagcaa tttctgtagc
     3841 acaaagacaa gattatatgt taaaaattcg tgaactttca aaaaattgtg ctgaaattta
     3901 taagaaaaat ttaaatgaag ctgagtgaaa tttataattt tttagatcaa ttaagtccct
     3961 ttaatatcca agaatcatgg gataatagtg gaattttgct tggagatagg gatagtgaaa
     4021 tttcaactgt ttatttaagc ttagatattg atgaaaatat cattaaagaa gcgagtgaaa
     4081 attctttaat tatcacacac catcctttga tatttaaagg tttaaaagat ttatatgaca
     4141 agacttatcc tagggctttt atcaaagaaa tgatttataa aaatatttct ttaatcagta
     4201 tgcatacaaa ttacgattta agtcatttaa atacttattt tacggaagaa attttaggtt
     4261 ttaaaatttc ttttaaagat aaatttttaa tttatgtgga aaattctatg tcttttgaag
     4321 ctttgtgtga ctgggtgaaa aaaaagttaa atttgcaaat tttacgtgta agtgattgtg
     4381 gcaaaaaaga cattaagcgc attgttatat gtactggaag tggcggggat ttaatttcta
     4441 aagtagatgc ggattgtttt ttaagtggag attttaaata tcatcaagct ttagaggcgc
     4501 ttagtaatca aatcagtctt attgatttgg gtcattttga aagtgagaga tatttttctc
     4561 aatgtttagc aaaagacttg aaaaatttgc cgctacaagt tataataaca gtttcaaaaa
     4621 atccatttca atatttttaa ggaaaataaa tgaataaata tctcgaacaa ttagtgcttt
     4681 tatcaaaaat agatcaagaa attgatagtt atgaaccaaa aatagacagt attaataaga
     4741 ctttaaaaga tgctgagtta aaaatagaaa aaatcaacgc agatttagaa aaaatcgatg
     4801 aagaaatcaa agatatagaa aatcaaaaaa tacaaaataa tgctcatgtt tccgagtttt
     4861 cagcaaaaat taaagatctt tctaaaaaaa gtggtgtggt aaaaacagaa aaagaagcta
     4921 atgctttaaa aattgaagaa gatattgcaa aagagcaatt agacgctgca aatgatgaga
     4981 ttgtaagact agataaaatt ttagagaata aagaaactta taaaaaagaa cttgaagaag
     5041 aaaaaatcaa acaagagcaa aatattaacg agattagagt aagcattaaa tctgaaatgg
     5101 aagttcttga aaaagataga atgagtgttt atgataaaaa aactaaactt gtgagtgaga
     5161 tgaatcaaaa agttttaagt ttttatgaga aaattcgcaa atgggcgaag aatactgctg
     5221 tagttcctgt taaaaaacaa gcatgctatg gatgttttat gaaaatttac gataagactt
     5281 atctgtccgt tgtaaaaggt gaagagattg taacttgtcc tcattgcgga agaattcttt
     5341 ataaagagca agaagaacaa aattgatctt tttttattat tttttaactt ggacggcatt
     5401 tttattttgt gccgtcttta ttcttttact ttctttttta aaatccaaat acaaaattag
     5461 tttaaaatct cgattttttc tttataaaaa tttacatcaa gaaaaagctg atgtacattt
     5521 tcatgcttgt tcttacgggg aggtaagaag tattaaagct ttggttttga aatttgattc
     5581 aagaataact actattactc aaacaggttt tgaatgtgca aaagaatttt gtaaaaaggt
     5641 aaattatctt gcttttgaaa attttttgcc tttttggctt aagccttgta aggttttggt
     5701 aatttttgaa gcagaatatt ggcttatgct tgtttttatg gcacgtattt ataaggctaa
     5761 gattattttg cttaatgcga gaatatctga taagtcttat cattcttatc aaagattttc
     5821 ttttttttat aaaaaaattt tttcttatat tgatgaagtt tttgctcaaa gtgat
//
LOCUS       DAPIYB010000088         5866 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.089, whole genome shotgun sequence.
ACCESSION   DAPIYB010000088 DAPIYB010000000
VERSION     DAPIYB010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5866
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.089"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..452
                     /locus_tag="RJ318_001485"
     CDS             <1..452
                     /locus_tag="RJ318_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431332.1"
                     /translation="KIKLDDIYIISLSGVEKFDLEEFKRFLESTEAKEKGMGSEVKKA
                     LENLEVPKTQVPSVEKIPTPSVPNLEVKQVEQLFKDPDEENKNDNGEINIDNLNTPKM
                     TPDIEEKIKRDLIANPPQIFKENNASKPYHLPQTGYDIKLDENSTQN"
     gene            complement(449..958)
                     /gene="lolA"
                     /locus_tag="RJ318_001486"
     CDS             complement(449..958)
                     /gene="lolA"
                     /locus_tag="RJ318_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDV7431333.1"
                     /translation="MKKTFLIFFIFIGQLFALDLNFNTFSSNFTQIVKSKNSTLSYSG
                     HFILSKDQAYWSYDTPSKKEIYINKNQVTIVEHDLEQVIFSHLDNIPNLNEIFKKASL
                     IDKDKLVAKYDNINYTIKLNQEQIQSISYKDEFENDVIINLNNQIKNPKINSDVFKAK
                     IPQNYDIVR"
     gene            1058..3646
                     /gene="secA"
                     /locus_tag="RJ318_001487"
     CDS             1058..3646
                     /gene="secA"
                     /locus_tag="RJ318_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDV7431334.1"
                     /translation="MFLNALKAVFGTKNDREVKKYFKRVAQINALEGNYQNLSDDELK
                     AEFAKFKEQILSGEKNENDVLNDVFAIVRETGKRTLNMRHFDVQLIGGMVLHDGKIAE
                     MKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVVLS
                     SQNSDIEHKQAYDCDITYGTNNEFGFDYLRDNMKFSKAEKVQREHNFVIVDEVDSILI
                     DEARTPLIISGPTNRTLDGYIKANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRNILIT
                     EAGIAKAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDVHYVLRNNEVIIVDEFT
                     GRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYNKLAGMTGTAQTEA
                     TEFSQIYSLDVISIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANAKGQPVLVGT
                     ASIERSEVFHNMLVKEKIPHHVLNAKNHEQEALIIQDAGKKGAVTIATNMAGRGVDIK
                     IDDEIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGD
                     RIKSIMDRLGIEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTI
                     YRYRNELLDENYDIRAKISQNIAEYSANVMNDYMLDESGSNVNFENLKAKILYECSTQ
                     ISEKDFENLSVIEMQDKLSQILENSYNEKMLRLEIKELRNIERILYLQVLDNAWREHL
                     YQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVQFNQEEAQ
                     NLENKANEENEKLLQSSVEMGASEDNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGP
                     KQGILA"
     gene            3643..4848
                     /locus_tag="RJ318_001488"
     CDS             3643..4848
                     /locus_tag="RJ318_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDV7431335.1"
                     /translation="MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVA
                     MAIMNGFDKEFEKRFFVMNYPITILPKFYAPVNDEFIDELRKTFPNLLFSPYLSTQVV
                     VKGDNRFEGGVLFGVNFNDEKKINEVVAKALKDENLSGFDILVGSALTDEFGLHKNDK
                     LSLIFSNLNPSGFSLVPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGIPKNPN
                     YDGIHVYSDNAFKDVEKIKSYLKDDYAVVGWWEQNKNFFSALELEKRALFIVLMLIIL
                     VASLNIVSSLLMIVMNRRSEIALLLALGASKNEVKKSFFALGMLIGGGGMIVGVVLAF
                     FALWLLGNFDIVTLPVDVYGTSKLPLDLSLMDFSLTIVGALIIIALSSFYPAKKATQI
                     NILDTLRNE"
     gene            4871..5656
                     /locus_tag="RJ318_001489"
     CDS             4871..5656
                     /locus_tag="RJ318_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDV7431336.1"
                     /translation="MSLFTQKNKNFKPLKPLSKSKIITNLILLILFLILFCYCSFSIS
                     AYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFLSTF
                     YIELVRGTPLLVQVLLIYYIIANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSIS
                     ISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQ
                     SAQEINSYTFATLEAYVILAITYLVLTLPISIFSRYLERKCQK"
     gene            5718..5793
                     /locus_tag="RJ318_001490"
     tRNA            5718..5793
                     /locus_tag="RJ318_001490"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5751..5753,aa:Lys,seq:ttt)
BASE COUNT         2026 a          723 c         1100 g         2017 t
ORIGIN      
        1 ataagattaa actagatgat atatatatca tatctttaag tggagtggaa aaatttgatt
       61 tagaggagtt taaacgcttt ttagaaagta ctgaggctaa agagaagggt atgggtagcg
      121 aggtaaaaaa agcacttgaa aacttagaag ttcctaaaac tcaagttcct agtgttgaaa
      181 agatcccaac tcctagtgtt ccaaatttag aagtcaagca agttgaacag cttttcaaag
      241 atccagatga agaaaataaa aatgacaatg gagaaatcaa tatagataat ttaaatacac
      301 ctaaaatgac tccagatata gaagaaaaaa ttaaaagaga tttaatcgcc aatcctccac
      361 aaatattcaa agaaaataac gcaagcaagc cttatcattt gccacaaaca ggctatgata
      421 taaagcttga tgagaattca acgcaaaatt agcgaactat atcataattt tgcggaattt
      481 ttgccttaaa aacatcggaa ttaatttttg gatttttaat ttgattgttt agattgatta
      541 taacatcatt ttcaaattca tctttatagg atatgctttg aatttgctct tgattgagtt
      601 taattgtata atttatatta tcatattttg ctacaagttt atctttgtct ataagacttg
      661 cttttttgaa aatttcatta agatttggaa tgttatcaag atgagagaaa atgacttgtt
      721 ctagatcgtg ctctactatg gttacttgat ttttgttgat ataaatctct tttttactag
      781 gagtatcata actccaatat gcttgatctt tactcagtat aaaatgccca gaataagaaa
      841 gtgtagagtt tttggatttc actatttggg taaaattgct tgaaaaggta ttaaaattaa
      901 gatcaagggc aaaaagttgt cctataaaaa taaaaaatat caagaatgtt tttttcattt
      961 attttcctta aaaaaatata ttttttatgt cattctagct aattttaatt aaataatcgt
     1021 tataatgata gcttgaaaaa tttataaagg tttagaaatg tttttaaatg ctttaaaagc
     1081 cgtgtttggc acaaaaaatg atcgtgaagt taagaaatat ttcaagcgtg tagcacaaat
     1141 caatgcttta gaaggcaact atcaaaattt aagcgatgat gaattaaaag ctgaatttgc
     1201 aaaatttaaa gagcaaattt taagcggaga aaaaaacgaa aatgatgttt taaatgatgt
     1261 ttttgctata gtcagagaga caggtaagag aactttaaat atgcgtcatt ttgatgtgca
     1321 gttaatcggt ggtatggttt tgcacgatgg aaaaatcgca gaaatgaaaa caggagaagg
     1381 taaaactctt gtagcgacct tacctgttgt tttaaatgcc atgagtggca aaggcgtaca
     1441 tgtcgttaca gtaaatgatt atctagccaa aagagatgct gagcaaatga gtgcgattta
     1501 taatttttta ggttttagtg ttggcgtggt gctttcttct caaaatagtg atatagaaca
     1561 caagcaagct tatgattgtg atattactta tggaaccaat aatgagtttg gttttgatta
     1621 tttgcgtgat aatatgaaat tttcaaaagc tgaaaaagtt caaagagagc ataattttgt
     1681 tatcgtagat gaagtagata gtattttaat tgatgaggca agaactccgc ttatcatcag
     1741 tggtcctaca aatcgtactt tagatggtta tattaaagcc aatgaagtag ctaaacaaat
     1801 gcaaaaaggt gaagcagttt taccccctgc aaaacctgag ggtgattttg tagtagatga
     1861 gaaaaatcgt aatattttaa ttacagaagc aggtattgct aaggctgaaa aactttttgg
     1921 cgtagaaaat ttatacagtc ttgataatgc tatcttagct catcagcttg atcaagcctt
     1981 aaaagcacat aatctttttg aaaaagatgt gcattatgtt ttaagaaata atgaagttat
     2041 cattgttgat gaatttacag ggcgtttaag cgaaggacgt cgttttagcg aaggattgca
     2101 tcaagcttta gaagctaaag aaaatgtaaa aattcaagaa gaaagccaaa ctctagcaga
     2161 tattactttt caaaattatt ttagaatgta caataaactt gcaggtatga caggaactgc
     2221 acaaacagaa gcgactgaat tttctcaaat ttatagttta gatgttattt ctataccgac
     2281 aaatattcct attaaaagac aagataaaga tgatcttatc tataaaactc aaaatgaaaa
     2341 attcaaagct gtaattgaag agattaaaaa agccaatgct aaaggtcagc ctgtacttgt
     2401 aggaaccgca agtatagagc gcagtgaagt ttttcacaat atgcttgtaa aagagaaaat
     2461 ccctcatcat gttttaaatg ctaaaaatca cgagcaagaa gctttgatta tccaagatgc
     2521 aggtaaaaaa ggtgctgtaa ctatcgctac aaatatggca ggtcgtggtg tggatataaa
     2581 aatcgatgat gagattaggg ctttgggtgg gctttatatc atcggtacag aaagacatga
     2641 aagccgccgt attgataatc aacttcgtgg tcgtgcagga aggcagggtg atcctggaat
     2701 aagtcgtttt tatctaagtt tagaagataa tcttttaaga atttttggtg gggatcgtat
     2761 taaaagtatt atggatcgct tgggcataga agagggcgaa agcatagaat caagaatcgt
     2821 tacaagagcg gttgaaaatg cgcaaaaaaa agttgaaagc ttgcattttg aaagcagaaa
     2881 gcatttgtta gaatacgatg atgtagcaaa tgaacaaaga aaaactattt atcgttatcg
     2941 taatgagctt ttagatgaaa actatgatat tagagctaaa atttctcaaa atatcgctga
     3001 atatagcgca aatgtaatga atgattatat gcttgacgaa agcggttcta atgtaaattt
     3061 tgaaaatttg aaagcaaaaa ttttgtatga atgttcaact cagattagtg aaaaagattt
     3121 tgagaattta agcgtcattg aaatgcaaga caagctaagt caaattcttg aaaattctta
     3181 taatgaaaag atgttaagac ttgagattaa agaattgcgt aatatagagc gtattttata
     3241 tttgcaagtt ttggataatg cttggagaga gcatttgtat caaatggata ttttaaaaac
     3301 aggaatagga cttcgtggat acaatcaaaa agatcctctt gtggaatata agaaagaaag
     3361 ttataatctt ttcttggagt tggtcaatcg tattaaattt gatagtatta aactactttt
     3421 tagcgtgcaa tttaatcaag aagaggcgca aaatttagaa aataaagcca atgaagaaaa
     3481 tgaaaagcta cttcaaagct cagtagaaat gggcgcaagc gaagataatc ttggcgaagc
     3541 tgaatttaaa aaagttccac gcaatgctcc ttgtccttgc ggaagtggaa aaaaatttaa
     3601 agaatgccat ggaaaaagtg gtcctaagca aggaatttta gcttgaataa aagcgtttta
     3661 aaatatttac tttttaagta tttaagattt gataaagagc aaccctttat caatctttct
     3721 atgcttttgg cctttttagg agtttgtgta ggactttgcg ttttgcttgt agctatggca
     3781 attatgaatg gttttgataa agaatttgaa aaacgctttt ttgtgatgaa ttatcctatt
     3841 actattttgc ctaaattcta cgctcctgta aatgatgaat ttatagatga gttaagaaaa
     3901 acatttccaa atttgttatt tagcccttat ttaagcactc aagttgttgt aaagggagat
     3961 aatcgttttg aaggtggtgt gctttttggc gttaatttta atgatgaaaa aaaaataaac
     4021 gaagtggttg ctaaagcttt aaaggatgag aatttaagtg gttttgatat acttgtagga
     4081 tcagcactta ctgatgaatt tggtttgcat aaaaatgaca aactttcact tattttttca
     4141 aatcttaatc ctagtggatt ttctttagta ccgcaaacta aacgttttga tgttaaagcg
     4201 cgttttactt cagggcttgc attttatgat aaagcttata tgtacacaga tgttgatgca
     4261 ttgaaaaaag tacttggaat acctaaaaat ccaaattatg atggaattca tgtatatagc
     4321 gataatgctt ttaaggatgt tgaaaaaatt aaatcttatt taaaagatga ttatgctgtg
     4381 gtgggttggt gggagcaaaa taaaaatttt ttttcagcct tagaacttga aaaaagagcg
     4441 ctttttatag tgttgatgct tattattttg gttgcaagtt taaatatagt aagttcttta
     4501 ttgatgatag taatgaatcg tcgcagtgaa atagcacttt tacttgctct aggtgcaagc
     4561 aaaaatgagg taaaaaagag tttttttgcc ttaggtatgc ttattggtgg tggtggtatg
     4621 atagtgggtg tggtacttgc attttttgct ttatggcttt tgggaaattt tgatattgta
     4681 actttacctg ttgatgttta tggaaccagt aaattaccac ttgatttgtc tttaatggat
     4741 ttttctttaa ccattgtggg tgctttaata atcatagctt tatcatcttt ttatcctgca
     4801 aaaaaagcaa ctcaaattaa tattttagat actttaagaa atgaataaat tgtaattttg
     4861 gagattttta ttgtctttgt ttactcaaaa aaataagaat tttaaacctt taaaacctct
     4921 atcaaagtca aaaataatca ctaatttaat tcttttgatt ttatttttaa tattgttttg
     4981 ttattgtagt tttagtataa gtgcttatca ttttgatttt agcgcaattg caacctataa
     5041 agaaaaattt cttcaaggtt ttttaaatac tttaataatc agtttttttt ctttattgtt
     5101 gagtataatt ttgggtggag ttttttgtgc tttttcttta agttcgattg tttttttaag
     5161 atttttatct acattttaca tagagcttgt cagaggaacc cctttactag tgcaggtatt
     5221 attgatatat tatatcattg caaataattt aggacttgat aatcgatatg tggctggagt
     5281 tattatttta tcatgttttt ctgctgctta cttagctgaa atatttagag ctggaatttt
     5341 aagtatttct atatctcagc ttgagagcgc tagggcttta gggttaaaag agatgcaggt
     5401 ttttgcgtat gtaatttttc cccaagcttt aaaaaatatt ttagcaccgc tgagtggaca
     5461 atttgcaaat ttaattaaag atagttcctt attaagcgtt attgctgtaa atgaattaac
     5521 ccaaagtgcg caagagataa attcttatac ttttgctact cttgaagctt atgtaatttt
     5581 ggctattaca tatcttgttt tgactttacc tataagtata ttttctcgtt atttggagag
     5641 aaaatgccaa aaatgattta aaaaagcttg acaaatagag ctaattttgg cataatcaca
     5701 tttttatttc agaaaatgtc tcgttagctc agccggtaga gcatctccct tttaaggagg
     5761 gggccgttgg ttcgaatcca acacgggaca ccatttttat tgttagggtt atgacccttt
     5821 cgtctagtgg cccaggacaa cactctctct gtgtggaaac agaggt
//
LOCUS       DAPIYB010000089         5853 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.090, whole genome shotgun sequence.
ACCESSION   DAPIYB010000089 DAPIYB010000000
VERSION     DAPIYB010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5853)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5853)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5853
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.090"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            53..2143
                     /gene="cfrA"
                     /locus_tag="RJ318_001491"
     CDS             53..2143
                     /gene="cfrA"
                     /locus_tag="RJ318_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent ferric enterobactin receptor
                     CfrA"
                     /protein_id="HDV7431337.1"
                     /translation="MKKICLSVCAIGLLSSYAISQNVELDSSIVSASGFTQDIKEAPA
                     TINVISKKELQSKPYRDVAEAIADIPGVDLYASKGKTGSYNITMRGITGYTLVLIDGR
                     RQGIGGEVGPNGFNEISNSFLPPISSIERIEVIKGPMSTLYGSEALGGVVNIITKKVS
                     DKWETSVSLDALLNENKDWGNTYGTSIYSSGPLMNDKLGLTLRFREFYRQQSNVEFTN
                     GSGQRVQGDQAQSPTKANNFNIGTRISYLANDYNTFIFDIDFSRNHYDNKQGQLGTIT
                     SPGSAPDSLTGGYADIMEVDKFVTYLSHEGVYENFSITSGLQYNRVSNNGREVVGQAN
                     QPFLGQNRDIVAEDIILDTKSVIPLGQSHILSAGGEYRLEKMQDKIANPTNFDQYLLA
                     IFAEDEYSIKDNLRLTFGARYNHHEIFGNNISPRAYLVYNPTDELTLKGGVSTGFRTP
                     YANRLINGAYNYSGQGRFPIYGNPDLKEETSLNYEIAAIYNNDLFYVSATGFLTNFKD
                     KISTQRYDKGNMIPGIGTCDADRCFKAINHGKVEYKGIELGAGISPLDNLNVNFAYTY
                     LDSEVKEAQDKSVIGKPEQDSLKHNIMLKTEYSFYNKITPWIKGEWQIDRYMGDTNIN
                     REYYKDIFFASMGVRYDINKQWSINAAIYNLFNKSFTDGWESYQNSGAPTWVNTYNRI
                     EEGRRMYISINGSF"
     gene            2446..3237
                     /locus_tag="RJ318_001492"
     CDS             2446..3237
                     /locus_tag="RJ318_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HDV7431338.1"
                     /translation="MKSRDKKDLILESIIQTYLLDNAPIGSNELNSNLCIPASTIRVY
                     LKRLSDEGLITQLHISSGRIPTILTMQNYWQSFWEKEQDKNIHIKNESFLKELSKEFE
                     IYCLVYGGRSLVLKEVLDLNTKFIVLDFEDEELVLKYEKEAWNFLQSLIGLDLSSIEK
                     IALRVHFIDLVEKIASLRQNLICYRSNEERAYQIYQNDEFVKLLDCQIHRHFKESLEF
                     EPLFKEGFMGLKVDAQFLGEDVNIILAGSVYTDYKKILQYIKEAA"
     gene            3234..3764
                     /gene="grpE"
                     /locus_tag="RJ318_001493"
     CDS             3234..3764
                     /gene="grpE"
                     /locus_tag="RJ318_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDV7431339.1"
                     /translation="MSEQKQEFENENAENSEHLQDENLQNIEDVEQNKLQKDYDELKD
                     KYMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAVNVECQDEISLKI
                     KEGVQNTLDLFLKKLEKHGVALIKDEKEFDPNLHEAMFHVDSENHQSGEVVQVLQKGY
                     KIADRVIRPTKVSVAK"
     gene            3786..5657
                     /gene="dnaK"
                     /locus_tag="RJ318_001494"
     CDS             3786..5657
                     /gene="dnaK"
                     /locus_tag="RJ318_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDV7431340.1"
                     /translation="MSKVIGIDLGTTNSCVAVYERGESKVIPNKEGKNTTPSVVAFTD
                     KGEVLVGDSAKRQAVTNPEKTIYSIKRIMGLMINEDAAKEAKNRLPYHITERNGACAI
                     EIAGKIYTPQEISAKVLMKLKEDAEAFLGESVTDAVITVPAYFNDAQRKATKEAGTIA
                     GLNVLRIINEPTSAALAYGLDKKDSEKIVVYDLGGGTFDVTVLETGDNVVEVLATGGN
                     AFLGGDDFDNKLIDFLANEFKDETGIDLKNDVMALQRLKEAAENAKKELSSANETEIN
                     LPFITADASGPKHLVKKLTRAKFEGMIDSLVAETITKINEVVSDAGLKKDEIKEIVMV
                     GGSTRVPLVQEEVKKAFNKDLNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLS
                     LGIETLGGVMTKIIEKGTTIPTKKEQVFSTAEDNQSAVTINVLQGEREFSRDNKSLGN
                     FNLEGIPPAPRGMPQIEVTFDIDANGILTVSAKDKATGKAQEIKITGSSGLSEEEINN
                     MVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSELGEKVAAADKENIQKALDDL
                     RETLKNQNASKEEIESKMKALSEVSHKLAENMYKKDEPNTANDKKKKDDDVIDAEVE"
BASE COUNT         2173 a          773 c         1145 g         1762 t
ORIGIN      
        1 ttattatcat aatattttga tttctaaatc aatatttgac aaaaggagaa aaatgaaaaa
       61 aatatgtcta tcagtttgcg ccattggtct cttaagctcc tatgccatat cgcaaaatgt
      121 agaactagat agctcaatcg ttagtgcttc tggctttacc caagatatta aagaagctcc
      181 tgctactatc aatgttatca gtaaaaaaga attacaaagt aagccttata gagatgttgc
      241 agaggctatc gcagatatcc caggcgttga tttatatgct agcaagggaa aaacaggttc
      301 ttataatatc actatgaggg gtattactgg atatactttg gttttgattg atgggcgtcg
      361 tcagggtatt ggcggagagg tgggccctaa tggttttaat gaaatttcaa attctttctt
      421 acctccgatt tctagtatag aaaggataga agttataaaa ggccctatga gtactttata
      481 tggctctgaa gctttaggcg gggtggtaaa tatcattacc aaaaaagtaa gtgataaatg
      541 ggaaacttct gtaagtttgg atgctctttt aaatgaaaat aaagattggg gtaatactta
      601 tggaacgagt atttattcta gtggtccttt gatgaatgac aaattgggtc taacacttcg
      661 atttagagaa ttttacagac agcaatctaa tgttgaattt acaaatggaa gtggacaaag
      721 agttcaagga gatcaagctc aaagtcccac aaaagcaaat aattttaata taggaacaag
      781 aattagttat ttagctaatg attataatac ctttatattt gatatagatt tttcaagaaa
      841 tcattacgat aacaaacagg gtcaattagg aaccatcaca agcccaggta gtgcgccaga
      901 tagcttaacg ggtggttatg cagatattat ggaagttgat aaatttgtga cttatttaag
      961 ccatgagggt gtttatgaaa acttttctat cacttctggt ttgcagtata atagagtaag
     1021 caataatgga cgcgaagttg taggacaagc taatcagcca tttttaggac aaaatagaga
     1081 tatagtcgca gaagatatta tcttagatac taagtctgtc attcctttgg gacaaagtca
     1141 tattttaagc gcaggtggtg aatataggct tgaaaaaatg caagataaaa tagctaatcc
     1201 gaccaatttt gatcagtatt tattggcaat atttgcagag gatgagtaca gcataaaaga
     1261 taacttaaga ttgacttttg gagcaagata caatcatcat gaaatttttg gaaataatat
     1321 ttcgccaaga gcttatctgg tttataatcc tactgatgaa cttactttaa aaggcggtgt
     1381 atctacgggt tttaggactc cttatgcaaa tcgtttgata aatggagctt ataattatag
     1441 tggtcaaggt agattcccta tatatggaaa tcctgattta aaagaagaga catctttaaa
     1501 ttatgaaata gcagctattt acaataatga tttgttttat gtttctgcga caggtttttt
     1561 aacaaatttt aaagataaaa tttcaaccca aagatatgat aaaggcaata tgattccagg
     1621 aattggtact tgcgatgctg atagatgttt taaggcaatc aaccatggca aggttgaata
     1681 taaaggtata gagcttggag cagggataag ccctcttgat aatttaaatg taaattttgc
     1741 ttatacttat cttgatagtg aggttaaaga agcacaagat aaaagtgtga taggtaaacc
     1801 tgagcaggat agtttaaaac acaatatcat gttaaaaact gaatacagct tctataataa
     1861 aattacccct tggataaaag gcgaatggca aatagatcgc tatatgggtg atactaatat
     1921 aaatagggaa tattataagg atatcttttt cgcttctatg ggtgtgcgtt atgatatcaa
     1981 taagcaatgg agtatcaatg cagctattta taatcttttt aacaaaagtt ttacagatgg
     2041 ttgggaatct tatcaaaata gcggtgctcc tacttgggtc aatacttaca atcgtataga
     2101 agaaggaaga agaatgtata tttctatcaa tggtagcttt taagctttaa tagaaaaact
     2161 aaagggcttt taaagtcttc tttagttttt tattttaata ccctatacct ttaaaaaact
     2221 agacaatcaa ttcaatttaa aattttcatc ttatttttat cgttgcattt tcaatcttaa
     2281 aagatagctt atccttataa aaaagcaact aataaaactt tagtcatata gactaaataa
     2341 aattaagtat attttttata tttacacttg acaaaataac actcaatgtt gtataatata
     2401 tctagcaatc aaaaaataga gtgctaaaaa tttaaggaaa gagctatgaa aagccgagat
     2461 aaaaaggatt tgattttaga gtctattatc caaacttatc ttttggataa tgcgcctatt
     2521 ggttctaatg agttaaattc aaacctttgc atacctgctt cgactatacg cgtttatctt
     2581 aaaagactta gcgatgaggg tttgatcact cagcttcata taagtagtgg tagaattcct
     2641 actattttaa cgatgcaaaa ttattggcaa agtttttggg aaaaagaaca agataaaaat
     2701 atccatatca aaaacgaaag ctttttgaaa gagttaagta aagaatttga aatttattgt
     2761 cttgtttatg gaggtagaag tttagtactt aaagaagtac tagatcttaa tactaaattt
     2821 atagtgcttg attttgaaga tgaagagctg gttttaaaat acgaaaaaga agcgtggaat
     2881 tttttacaaa gtcttatagg gcttgatctt tctagtatag aaaaaatagc tttgagagtt
     2941 cattttatag atcttgtaga aaaaatagct agcttaagac aaaatttgat ttgctataga
     3001 agcaatgaag aaagagctta tcaaatttat caaaatgatg aatttgttaa gctcttagat
     3061 tgtcaaattc accgtcattt taaagaaagt cttgaatttg aacctttatt taaagaaggt
     3121 tttatggggc ttaaggtgga tgcgcagttt ttgggcgaag atgtaaatat tatcttagca
     3181 ggtagtgttt atacggatta taaaaaaata ttacaatata taaaggaggc ggcgtgagcg
     3241 agcaaaagca agaatttgaa aacgaaaacg cagaaaattc tgaacatttg caagatgaga
     3301 atttgcaaaa tatcgaagat gttgagcaaa acaaattgca aaaagactat gatgaattaa
     3361 aagacaaata tatgcgtgca aacgctgaat ttgaaaatat taaaaaaaga atggaaaaag
     3421 aaaagctaag tgctatggct tatgcaaatg aaagctttgc aaaggatttg cttgatgttt
     3481 tagatgcttt agaagcagct gttaatgttg aatgccaaga tgaaattagc ttaaaaatca
     3541 aagaaggagt gcaaaatact ttagatttat ttcttaagaa acttgaaaaa catggagtgg
     3601 ctcttatcaa agatgaaaaa gagtttgatc ctaatttaca cgaagcaatg tttcatgtag
     3661 atagtgaaaa ccatcaaagt ggtgaagtgg ttcaagtgct tcaaaaaggt tataaaatag
     3721 ccgatcgcgt gatccgccca accaaagtta gtgtagcaaa ataaatttta ataaaaggat
     3781 aaaaaatgag taaagttata ggtatagatt taggaacaac caattcttgt gttgctgtgt
     3841 atgaacgcgg cgagagcaaa gtaatcccaa acaaagaagg aaaaaacaca actccttcag
     3901 tggtagcttt tacagataaa ggcgaggttt tagtaggcga tagtgcaaaa cgccaagcgg
     3961 taactaaccc tgaaaaaacc atttattcta tcaaaagaat tatgggttta atgatcaatg
     4021 aagatgcggc taaagaagct aaaaatagac ttccttacca catcaccgaa agaaatggtg
     4081 cgtgcgcaat agaaatcgca ggtaaaattt acaccccaca agaaatttca gcaaaagttt
     4141 tgatgaaatt aaaagaagat gcagaagctt ttttgggtga aagtgttact gatgcggtga
     4201 ttactgtgcc tgcttatttt aacgatgcac aaagaaaagc gacaaaagaa gcgggaacga
     4261 tagcaggact taatgtatta agaattatca atgagcctac ttcagcagct ctagcttacg
     4321 gacttgataa aaaagatagt gaaaaaattg tggtttatga tctaggtggg ggaacttttg
     4381 acgttactgt gcttgaaacg ggcgataatg tagtagaagt tttagcaaca ggtggtaacg
     4441 ctttcttagg tggtgatgat tttgataata aacttataga ttttctagct aatgaattta
     4501 aagatgaaac aggcatagat cttaaaaatg atgttatggc tttgcaacgc ttgaaagaag
     4561 cagcagaaaa tgctaaaaaa gaattaagtt cagctaatga aactgaaatt aatttaccat
     4621 ttatcacagc agatgcaagt gggccaaaac atttggttaa aaaacttact agagctaaat
     4681 ttgaaggtat gattgattct ttagtagctg aaaccatcac taaaatcaat gaagtagtaa
     4741 gcgatgcagg gcttaaaaaa gatgagatca aagaaatcgt tatggtaggg ggctctactc
     4801 gtgttccttt agtgcaagaa gaagtgaaaa aagcctttaa taaagatctt aataagtctg
     4861 taaatcctga tgaagttgtg gctatcggtg cggcgattca aggtgcggtt ataaaaggtg
     4921 atgtaaaaga tgtgctttta cttgatgtta ctccgctctc tttgggtata gaaactctag
     4981 gcggggtaat gactaagatt atcgaaaaag gtacaactat tccaactaaa aaagagcaag
     5041 ttttctcaac cgctgaagat aatcaaagcg ctgtaactat caatgtttta caaggggaaa
     5101 gagaatttag tcgtgataat aaatctttag gaaattttaa tcttgaagga attccaccag
     5161 caccacgcgg tatgccacaa atcgaagtta cttttgatat cgatgcaaat ggtattttaa
     5221 ctgttagtgc aaaagataaa gcaacaggta aggctcaaga gatcaaaatc acaggttcaa
     5281 gcggacttag cgaggaagag attaataaca tggtaaaaga tgctgaactt cacaaagaag
     5341 aagacaaaaa acgcaaagaa gctgtagatg ctagaaatgc agctgatagc ttggcgcatc
     5401 aagtagaaaa atctttaagt gagttgggtg aaaaagttgc cgctgctgat aaagaaaata
     5461 ttcaaaaagc tcttgatgat ttgcgtgaga ctttgaaaaa tcaaaatgca agcaaagaag
     5521 agattgaaag caaaatgaaa gctttaagcg aagtttctca taagttagcc gaaaatatgt
     5581 ataaaaaaga tgagccaaac acagcaaatg ataaaaagaa aaaagatgac gatgtaatcg
     5641 acgctgaagt tgagtaatct taaaatctct attcaagcct ttttaaaagg cttgaaaatt
     5701 ttttaaaatt ttaaagaaat gacaaaatct gtaaaacata attcttttat tagcttgcta
     5761 cctaattttt cattgatttt ttaaccaatt ctttttgaag ttctaattca aatcagacaa
     5821 ttcattttag tgtaagcaaa ctaaaaaatt aac
//
LOCUS       DAPIYB010000090         5808 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.091, whole genome shotgun sequence.
ACCESSION   DAPIYB010000090 DAPIYB010000000
VERSION     DAPIYB010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5808)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5808)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5808
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.091"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(32..1372)
                     /locus_tag="RJ318_001495"
                     /pseudo
     CDS             complement(32..1372)
                     /locus_tag="RJ318_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002843169.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
     gene            complement(1381..2748)
                     /locus_tag="RJ318_001496"
     CDS             complement(1381..2748)
                     /locus_tag="RJ318_001496"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDV7431341.1"
                     /translation="MTGISVFDHRLLADSWSTQEMRAIFCEQNRIQKWLDVEAALAKA
                     QAKLKIIPKKAADEIAKKAHYKFMDMDFIFAEFKKTKHPLVPTVRGLEKACDNNLGEY
                     VHFRVTTQDIIDTGLVLQFKEAMTLVKSELKAIAKALAKLAKTHKNTAMMGRTLALQA
                     LPITFGHKVAIWLSELDRHFERILELEKRLYVGSIVGAVGTKASLSDECNEVEKLTLE
                     NLGLEVPNISWQSTRDRFIELGFVLGNINATFNKIAHQLLILSHNEIDEVAEPFGKGQ
                     VGSSTMPHKRNPAVSENAVTVSNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMF
                     LMLSVVLANMKFALSDLEVKKDKMLKNLDTLKGFVLAERVMFALSDHYGKQHAHEIVY
                     ENAMLGIEQQKTFKEVLLADTRVSQVLKEKDIDALLDATSYVGYAPKLVDEFLAKIKN
                     SAILK"
     gene            complement(2758..3920)
                     /locus_tag="RJ318_001497"
                     /pseudo
     CDS             complement(2758..3920)
                     /locus_tag="RJ318_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866696.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
     gene            complement(3933..5372)
                     /gene="dcuC"
                     /locus_tag="RJ318_001498"
                     /pseudo
     CDS             complement(3933..5372)
                     /gene="dcuC"
                     /locus_tag="RJ318_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247107.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DcuC"
     gene            complement(5376..5738)
                     /locus_tag="RJ318_001499"
     CDS             complement(5376..5738)
                     /locus_tag="RJ318_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDV7431342.1"
                     /translation="MSNYPKAIGPYSAYREVNGLLFISGQLPINPASGEIESSDIKEQ
                     TKQSLKNIGAILEENGISYDKVIKTTCFLADINDFVAFNEIYAEFFKAPYPARSAFAV
                     KDLPKKAKVEIEIIAQKG"
BASE COUNT         1854 a         1038 c          928 g         1988 t
ORIGIN      
        1 ttatccttct tgtaaaaaga aggataaata tttaaaaaga aaagtggttt aaattttcta
       61 gattgatgat ttgatctaga attttgttag ctttagtatt atcaaggtaa atttgtgcat
      121 tggctaaaaa tttagctttt aattcttcaa aacttagtgg attatcaaaa ttacctttat
      181 tgataaaaac atctttttgg attatgcgtc catcttgcaa actggcttct aaatgccctg
      241 gaaaatattt tggaaagcct tgagatttcc tttttttgta actgattttt ttagcaaatt
      301 ctagtacttc ttcacgcttt aaattttcat aagattcaag agtgatttta ccatcaaaga
      361 atcctagagc cattaaaaaa ggcatggaaa atttggcctc ataagcactg tttggagtgt
      421 attttgcttc taaaggatcg caaataaaag aaataggaac ttcatctaca aaacaacgaa
      481 tgcttttgat ttcatctgct tttaagccat cattttttaa agctatggca caatcaataa
      541 gaccatgagc aaaatggcag cttggataag gctttataga aacttgcata ctttgctaaa
      601 tttcacccaa gcctttatca agttctgttt tatcgcattc ttgttctata ccaaaacatt
      661 taaagatatt atccctacct ttaaaaatgc ttagaggttc actcatgtta tttttagcaa
      721 agttagcgat taaaattcca tttttaatgg catttgctat atgtaagact tttgaattag
      781 agccattgga taagaactca ttaatcccac ttgcaaaact tccagcaagt cctaaagcat
      841 tgatgatttg ttctttgtta agatccagca agattgcact tgcactcaca cttccaaaaa
      901 ttcctgcaat agcagtggta tgaaaaccac gcttatgaaa agtgcctttg cttgcaatgc
      961 ctactctagc tgcaatttcc cagcctatta taaaagcttt gatgattttt ttcgcatctt
     1021 tgctaacatg aaaaccataa cttaaacaaa gaggagttaa aatcgcactt gcgtgcaaaa
     1081 tagcttctgt atgcgtatca tcaaaatcaa gtgcatgaga agcaatgcca tttagcatgg
     1141 ctgcataaat gggatctaat tttttatcat gtacccatac aggggtattt ttttctgtgc
     1201 ttaaattttc aaaagcttta aaggcattta aaacgcattc ttccttactc gctgctatag
     1261 ccgttccaag gctatcaagc ataagctctt tagctctttg aacaactgta ttagggatat
     1321 tttcatactg aagattgaaa ataaaatccg ccaaaatttc gctatagaac atgatttttc
     1381 ctattttaag atagcgctat ttttgatttt tgccaaaaat tcatctacaa gttttggtgc
     1441 atatcctaca taacttgttg catcaagtaa agcatcgata tctttttctt ttaagacttg
     1501 agatactctt gtatctgcaa gcaatacttc tttgaaagtt ttttgttgtt cgatacctag
     1561 catagcgttt tcataaacga tttcatgagc gtgttgtttg ccgtaatgat cgcttagtgc
     1621 aaacataacg cgttctgcca gtacaaagcc tttaagagtg tcaagatttt taagcatttt
     1681 atctttttta acttctaggt cactaagagc aaatttcata tttgctaaaa ccacagaaag
     1741 cattaaaaac atttcaggta aaagtttcca ttccattttc caaacttgcc catctctttc
     1801 atgctcgtgt ctttcaatat cgcttaaaat ggctaaattt gccttaaagg cattgcttac
     1861 tgtaactgca ttttcgctta ctgcaggatt tcttttgtgt ggcatagtgc tagatcctac
     1921 ttgtcctttg ccaaaaggtt ctgctacttc atcgatttca ttgtgtgaga gtatgagtaa
     1981 ttgatgagcg attttgttaa aagttgcatt gatattgcct agtacaaaac caagctctat
     2041 aaagcgatca cgtgtgctct gccaagagat attaggcact tcaagtccta aattctctaa
     2101 agttagcttt tctacttcgt tgcattcatc gcttaaactc gccttggttc caacagctcc
     2161 tactatgctg cctacataaa gtcttttttc aagttcaagt attctttcaa aatgacgatc
     2221 aagctcgcta agccagatgg ctaccttatg cccaaaggtg atcggtaaag cttgtaaagc
     2281 aagagttctt cccatcatag cagtgttttt atgggtttta gctagtttcg ctaaggcttt
     2341 tgcgatagct tttaattcgc tttttacaag agtcattgct tctttaaatt gtaaaaccag
     2401 tcctgtatcg atgatatctt gagtggttac tctaaaatgt acatattcgc ctaaattatt
     2461 atcgcaagct ttttctaatc ctcttacagt aggaactaaa gggtgtttgg tctttttaaa
     2521 ttcagcaaag ataaagtcca tatccataaa tttataatga gctttttttg cgatctcatc
     2581 agctgctttt ttagggataa ttttaagttt tgcttgtgct tttgctaaag ctgcttcaac
     2641 atcgagccat ttttgtatgc ggttttgttc gcaaaaaata gcacgcattt cctgcgtgct
     2701 ccatgagtct gctagtaatc tatgatcaaa tacgctaatt cctgtcatct tatctcctta
     2761 ttttttaata ctatcaaaag cttgtgttaa atcagcaatt aaatctttag tatcttcaag
     2821 acctatatga aatcttacaa atagccctct tgcacttagg tctgttgcag ttctaggcgg
     2881 agtagttacg gtggctaagc tttcatatcc accccagcta gcaccaattg aaaagtattc
     2941 tagtttatct acaaatttaa tagcatcatc tttgttataa ccttctgcaa attctatggt
     3001 aatcatacca tttgcacctt tatgatcacg catgaaaatt tcatgatttg ggtgggattt
     3061 gagttttgga tagaaaattg ttttaatttc ttttctgctt tgtaaaaact ctacaatttc
     3121 atcagcactt ttttcatgag ctttcattct tacatctagt gttctcatac cacgaagtac
     3181 taagtaagca tcatcaggac ttgttgtaaa gcctaaagct tctggaagtt tgtcaaaatt
     3241 tttccattct ttttcgttga ttactactat acccatggtt acatcagagt gtccactaag
     3301 atattttgta gcggcgataa ctgaaatgtc tactccaagt tctaaaggat ttagaaaata
     3361 tccactagaa taagtattgt caatagctac agggatatta tatgcatgag caattttgca
     3421 aagttttggt aaatctatga tttcataaag tatagaacct ggactttcgc ataggataag
     3481 cttggtatta ggtttgattt tttcttctat atcacttgca tcagctttta aaaaatcaat
     3541 ttcaacgcct attttgtcta aaaataattc gcaaatcgtt cttacaggcc cataaattgc
     3601 atcagtgatt aaaaaatgtg catctttgct tgcatagttt aaaagtacca tggctaatgc
     3661 tgcaagtcct gttggaaaaa gttgtgctct ataaccaccc tctagagtgc aaataagttt
     3721 ttcaagttca aaattggttg ttgttcctct agctccatag cttaaaacac gatctgtttt
     3781 tcttaattct ctgtattttt ccaagttgcg tgatctttaa aaagtatggt tgatgcacgc
     3841 ataagtgtag gattgactga tcttacttca gcaccttgat cgcctctgcc acaatgaata
     3901 agtttagttt ttgagttcat tttttctcct ttttaaagat aaatataagt cataataaca
     3961 tttacaatag ccgctacaag cataggaata gctgttcttt taactacggc aaaaggactt
     4021 acttttgcaa tagctgagat agctaagatc gctggtgcaa taggactaac acatcttcca
     4081 aagcccgtca tgatttgaat tggtgctatc atggtgatag tttcaactcc aaagtgtttt
     4141 gctatatttg ggataagtgg agcaaagcta aaaaatgccg catttcctga acccattaag
     4201 aaagcacaaa ccgcaagcaa gattgaaacg gcgataataa tagccaaaac tccaaatcct
     4261 gcatttttgc aaaattctat taaagtatct acaaaaccta cagataaaag accacttgca
     4321 aatacttgac cgcaaacgat gagtgaaact gtgataacaa ataaatgtcc cattccttta
     4381 aagaaaatca taatagaatt aagagtttct acaacgcttt tatagcgtat catttcaaaa
     4441 ataatagcca caaaagttga aatcaccatt gcttactgga acattcattt taattgcagt
     4501 gctagcagct gctttaactt cttgggcact acttattccc attaaaacca agatgctatc
     4561 aagcacggaa ctaaatccta ggattaaaac caaaggaatt ataggtaaaa tcgcataaat
     4621 tctaggaggc tttttaagtt ctttttcttt accttcattt tcatttagtt ctttttcaat
     4681 ttcttgtgca ttgaaggcaa aattatcttt tttgtcaaaa aatttattgc aaagatatat
     4741 cgcaatacct acagctataa tgataggcaa ggttgtaggg agttgataat gaacaaaata
     4801 aattgcagga tcaacttcag ctacttttga tgccatgatc acatttccac ttccaggtcc
     4861 atgatcgata tattgacaaa tcgcaatcac acttaaggca gaaagttttg aaacaccaga
     4921 agtacaagta taggatacat agtaaccata agtaaaagtg ccaaacctgc gtgagaaggg
     4981 ataaaaagaa ccaaaaattg cacgataaaa tatgcaacta aaagtaagat ataaggggac
     5041 tttaccattt ttaaaggttt ttcaaaaact ttaaagagtg tataagaagc cccaacatga
     5101 tccatataag cagaaaaacc tgctatagtc ataagtgtaa gtccaagccc tactaatgta
     5161 cttgacatgg tttgattgaa aacttgaaaa atatcaaaaa aacctaaatt taaagaacct
     5221 ttagcgacaa tatgtggaga aagtccaaaa agagcagcta aggaaagtaa aagtaaacca
     5281 cttaaaagca atgccatgtg agcattgatt tttttataaa gcataaaaac aagcaaaaaa
     5341 acactaaata aagaaaaaac aatacctagc atgttttatc ctttttgagc gatgatctct
     5401 atctctactt tagctttttt tggtagatct tttaccgcaa aagcacttct tgctggataa
     5461 ggagctttaa aaaattcagc ataaatttca ttgaatgcta caaaatcatt aatatcagct
     5521 aaaaagcaag tggttttaat cactttatca taactgatac cattttcttc taagatagca
     5581 ccgatatttt ttaaagattg tttggtttgt tctttgatat cagagctttc tatttctcct
     5641 gaagcagggt tgataggaag ttgtcctgat ataaataaaa gtccatttac ttctctgtaa
     5701 gctgagtatg gaccaatggc ctttggatag tttgacatga attctccttt gttaaatata
     5761 gattaagcag aatgcatttt atcactacaa taataatttg tcaatagt
//
LOCUS       DAPIYB010000091         5585 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.092, whole genome shotgun sequence.
ACCESSION   DAPIYB010000091 DAPIYB010000000
VERSION     DAPIYB010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5585
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.092"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(1..1058)
                     /locus_tag="RJ318_001500"
                     /pseudo
     CDS             complement(1..1058)
                     /locus_tag="RJ318_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853525.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
     gene            1137..1835
                     /gene="pseF"
                     /locus_tag="RJ318_001501"
     CDS             1137..1835
                     /gene="pseF"
                     /locus_tag="RJ318_001501"
                     /EC_number="2.7.7.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid cytidylyltransferase"
                     /protein_id="HDV7431343.1"
                     /translation="MKNLCIIPARGGSKRIPRKNIIDFLGKPLISYSIENALNSGIFD
                     EVVLSSDDEEIIEVALKYGAKAPFVRDKNLSDDYASSTAVVQNAIEILQSQNQIYDHV
                     CCLYATAPLLNKDILKQAYEKFIQNQSKFLFAATEFEYPIQRAFYLNENNQVYMFDEK
                     HYKSRSQDLTKAYHDAGAFYFGTSKAWLEEDFIFKPHSSVFVLPRNLVCDIDTIQDLE
                     FAKILYKVNHESAF"
     gene            1819..2643
                     /gene="pseG"
                     /locus_tag="RJ318_001502"
     CDS             1819..2643
                     /gene="pseG"
                     /locus_tag="RJ318_001502"
                     /EC_number="3.6.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,4-diacetamido-2,4,
                     6-trideoxy-beta-L-altropyranose hydrolase"
                     /protein_id="HDV7431344.1"
                     /translation="MKVLFRSDSSSQIGFGHIKRDLVLAKQYSDVSFACLPLEGSLID
                     EIPYPVYELSSESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDE
                     IKPHHCDILLNVNAYAKASDYEGLVPFKCEVRCGFSYALIREEFYQEAKENREKKYDF
                     FICMGGTDIKNLSLQIASELPKTKIISIATSSSNPNLKKLQKFAKLHNNIRLFIDHEN
                     IAKLMNESNKLIISASSLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYKY"
     gene            2640..3113
                     /gene="pseH"
                     /locus_tag="RJ318_001503"
     CDS             2640..3113
                     /gene="pseH"
                     /locus_tag="RJ318_001503"
                     /EC_number="2.3.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase"
                     /protein_id="HDV7431345.1"
                     /translation="MIKLKNFTELNSQEIELIFKWRNHPDINQFMKTKYIDFEEHLRF
                     LKKLHQDSSKKYFLVFQDEQIIGVIDFVNITTKSCEFGLYAKPNLKGVGQILMNEIIK
                     YAFENLKVNTLKAYVFKDNRKALKLYQQNHFTIYDEDKDFYHICLKQSDCKALPS"
     gene            complement(3078..3824)
                     /gene="hisF"
                     /locus_tag="RJ318_001504"
     CDS             complement(3078..3824)
                     /gene="hisF"
                     /locus_tag="RJ318_001504"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDV7431346.1"
                     /translation="MLKTRIIPCVLLKNGQLVKSIEFKDFRTIGHLTSTMRIYNARNI
                     DELIILDIDASKSGEIDFESIEDLAKECFMPLTIGGGIKTLEDIQKILNLGADKISIN
                     SKALEDMDFISKAANRFGSQCIVCSIDVKRKGGQFCVYDRGNLLEKSPLELALEYEKK
                     GAGELLLTSVDFEGRAKGYDLELLKIFQNKLKIPLIINGGLSNPSDGVEALNLGADAL
                     AGAYIFHFSKYTPKDVKEELARQGFAVRLL"
     gene            complement(3825..4430)
                     /gene="hisH"
                     /locus_tag="RJ318_001505"
     CDS             complement(3825..4430)
                     /gene="hisH"
                     /locus_tag="RJ318_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDV7431347.1"
                     /translation="MIALIDYKAGNLNSVAKAFEKIGAINFIAKNPKDLQKADKLLLP
                     GVGSFKEAMKNLKELGFIEALKEQVLVQKKPILGICLGMQLFLERGYEGGVCEGLGFI
                     EGEVVKFEEDLNLKIPHMGWNELEILKQVPLYQGIDNKSDFYFVHSFYVKCKDEFVSA
                     KAQYGHKFVASLQKDHIFATQFHPEKSQNLGLKLLENFARL"
     gene            complement(4427..5563)
                     /gene="pseA"
                     /locus_tag="RJ318_001506"
     CDS             complement(4427..5563)
                     /gene="pseA"
                     /locus_tag="RJ318_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid biosynthesis protein PseA"
                     /protein_id="HDV7431348.1"
                     /translation="MKFCKKCVMPDTKPDLHFDEEGVCDACRSQEAKNQNINWQEREK
                     EFFELIKKYKKHPVYDCVIGVSGGKDSTFQVVKMLELGLNPLCVCFEPSVPTKIGRKN
                     LDNLNHLGVDLIHIKRDPKVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPL
                     IIWGESPQIEYGGPASSKNKNILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTY
                     PSDEELQRVGVTGLFLGYYFKWDYKKILEISKKYGFLTLDHPVETTYENFENLDCYSN
                     HVHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLVQKYDGKPPKKAIKKYLEFSG
                     FSEEEFQKIVDSFTNKKIFKRDENGKFIRDYDGSLVRKDECVLK"
BASE COUNT         1965 a          982 c          728 g         1910 t
ORIGIN      
        1 agtaatcctc ataccatgat ttaaatcttt tataaatctt ccatcaatct cactttcgtc
       61 ttttattaaa tgtaaagtgg cgtcatatcc tagctcttta tacgctaaaa aaagagtttg
      121 tttatctttt gctgtattaa atggatcttt taaactatga taagatacta aaataatatt
      181 tttattgaca ctagcttgta tagttaaatg ggaagaattt aacaaagaac gaatcatata
      241 attttcatta gtaaaaaaat aagataatct ttcatcttct ctagtccagt acgttttaat
      301 aaacatgcct accaatttat ttaaatcact aaaaaaaaat tcgggtctac ttaaatcttt
      361 tcctattata cattccaata atggcaaaac agttcctgaa ttatcaatca cgccatccac
      421 ataccaagga gctatctttg ctatgagcaa ggctaagtat cctccataag acccccccca
      481 taaatttttg gtaaatctgc aaattttgga aagcgtttaa ctaaatcttt taaagcattg
      541 atatgatcaa tagctgccat aatgccatag ttttgataat ctccattagg tgggataaaa
      601 gttgaagtaa atttcgcttg ataattttgc gctaattttc cttgtgattt taaagtaata
      661 atatgctgaa taagcaattc ataatacttg gtagaatttt tacaatcaag attctgtgga
      721 ttaatgccaa aatctaacaa aatcttagat agacttaaca aatcctcctc catgaagcta
      781 atagaagcac tatacttttt attatttgat attcttgcac aaaaacaatg ataaaaaaca
      841 tgtaccacta caacatcaaa atttttagca atatattccc tatcaaaatc taaaaaagaa
      901 atatttgcat tagctccata acctcctatg acaaaaacta tggctttgat atctttttca
      961 tcatcatagc taatgcggta ttcaagtttg ctagttcttt ttatatttaa ttctacatca
     1021 tcacaagaat caatttcaaa ggtttggttt ataagcaatt ttaagccttt tattgtattt
     1081 taaagacaat tatacttaaa ttttagtaaa ataaaacaca aaaacaaggc ttaactatga
     1141 aaaatctttg cataatccct gctcgtggtg gatcaaaaag aattcctaga aaaaatatca
     1201 ttgattttct aggtaaacct ttaatctctt atagcataga aaatgcttta aattcaggta
     1261 tttttgatga agtggtgctt tcaagcgatg atgaagaaat catagaagta gccttaaaat
     1321 acggtgcaaa agctcctttt gtgcgtgata aaaatttaag cgatgattat gcttcaagca
     1381 ctgctgtagt gcaaaatgcc atagaaattt tacaaagcca aaatcaaatt tatgatcatg
     1441 tctgctgcct ttatgctact gctcctttgt taaataaaga cattttaaaa caagcctatg
     1501 aaaaatttat acaaaatcaa agcaagtttt tatttgctgc tactgagttt gagtatccta
     1561 tacaaagggc attttatcta aatgaaaaca atcaagttta tatgtttgat gaaaaacatt
     1621 ataaaagtcg ttcacaagat ctaacaaaag cttatcatga tgcaggagct ttttattttg
     1681 gtacaagcaa agcttggctt gaggaagatt ttatatttaa acctcattct agcgtgtttg
     1741 tattgccaag aaatttagtt tgcgatatag acaccataca agatttggaa tttgcaaaaa
     1801 tactttataa ggtaaatcat gaaagtgctt tttagaagcg atagctccag tcaaataggc
     1861 tttggacaca ttaaacgcga tctagtctta gctaaacaat atagcgatgt aagttttgct
     1921 tgcttgcctt tagaaggctc cttgatcgat gaaattcctt atcctgttta tgagcttagt
     1981 agcgaaagta tctacgagct tatcaatctc atcaaagaag aaaaatttga acttcttatc
     2041 attgatcact atggcatcag cgtagatgat gaaaaactga tcaagcttga aacaggggtg
     2101 aaaattctaa gctttgatga tgaaataaag cctcatcatt gtgatatttt actcaatgtc
     2161 aatgcctatg caaaagcaag tgattatgaa ggtttagtgc cttttaaatg cgaagtaaga
     2221 tgtggttttt cttatgcttt aatcagggaa gaattttatc aagaggccaa agaaaataga
     2281 gaaaagaaat atgatttttt catttgcatg ggtggaactg atataaaaaa cctttcttta
     2341 caaattgcta gcgaattacc taaaacaaaa atcatcagca ttgcaaccag ctcttctaat
     2401 cctaatctta aaaaattgca aaaatttgca aaattacata acaatattag attatttatc
     2461 gatcatgaaa atattgcaaa attgatgaat gaaagcaata aactcatcat tagtgcaagt
     2521 tctttagtca atgaagcctt gcttttaaag gcaaatttca aagctatttg ttatgttaaa
     2581 aatcaagaat ctacagcaac ttggcttgct aaaaaagggt atgaagtgga gtataagtat
     2641 tgataaaact taaaaatttc acagaactta attctcaaga aatagagctg atttttaaat
     2701 ggcgcaatca ccccgatatc aatcaattta tgaaaacaaa atatattgat tttgaagaac
     2761 atttaagatt tttaaaaaaa ttacatcaag attctagcaa aaaatatttt ttagtttttc
     2821 aagatgaaca gattatcggc gtaattgatt ttgtcaatat cacaactaaa tcttgcgaat
     2881 ttggacttta cgcaaaacct aatttaaagg gcgtaggaca aattttaatg aatgaaatta
     2941 taaaatacgc ttttgaaaac ttaaaagtaa atactcttaa agcttatgtt ttcaaagaca
     3001 atcgcaaagc tttaaaatta tatcaacaaa atcattttac tatttatgat gaagataaag
     3061 atttttacca tatttgtcta aagcaatctg actgcaaagc cttgcctagc taattcttct
     3121 tttacatctt taggggtata cttagaaaaa tgaaaaatat aagcacccgc taaagcatca
     3181 gcacctaaat ttaaagcctc aactccatca cttggattgc taagtcctcc attgataata
     3241 agaggaattt taagtttatt ttgaaagatc tttaaaagtt ctaaatcata accctttgcc
     3301 cttccttcaa aatccacaga agttaaaaga agctctccag ctcctttttt ttcatattct
     3361 aaagcaagtt ctaaaggact tttttcaagt aaatttcccc tgtcataaac acaaaattgc
     3421 cctccttttc ttttaacatc tatagaacaa actatacatt gagaaccaaa acgattagcc
     3481 gctttactta taaaatccat atcttctaag gccttagaat tgatagaaat tttatccgca
     3541 cctaaattta aaatcttttg tatatcttca agggttttta tcccgccacc tatagttaaa
     3601 ggcataaaac attctttagc aagatcttct atactttcaa aatctatttc tccacttttt
     3661 gaagcatcta tatctaagat aataagctca tcaatattgc gtgcattata aattctcatt
     3721 gttgaagtta aatgccctat agtgcgaaaa tctttaaatt ctatactttt aacaagttgt
     3781 ccgtttttta acaaaacaca agggataatt ctagttttta acatttaaag ccttgcaaaa
     3841 ttttctaaaa gttttaaacc taaattttga cttttttcag ggtgaaattg tgtagcaaaa
     3901 atatgatctt tttgtaaaga tgcaacaaat ttatgtccgt attgtgcttt agcacttaca
     3961 aactcatctt tgcatttcac ataaaaagaa tgcacaaaat aaaaatcact cttattatct
     4021 atgccttgat acaaaggaac ttgttttaaa atttcaagct cattccaacc catatgtggg
     4081 atttttaaat ttaaatcctc ttcaaatttg actacttcac cttctataaa accaagtcct
     4141 tcgcaaactc caccttcata gcccctttct aaaaaaagct gcattcctaa acaaatgcct
     4201 aaaataggtt ttttttgtac taaaacttgc tcttttaaag cttctataaa accaagttct
     4261 tttaaatttt tcatcgcttc tttaaaagat cccactccag gtaaaagcaa tttatctgct
     4321 ttttgcaaat cttttggatt tttagctatg aaatttatag ctcctatttt ttcaaaagcc
     4381 ttagcaacag agtttaaatt tcccgccttg taatcaatga gcgctatcat tttaaaacac
     4441 actcgtcttt tcttaccaaa gaaccatcat aatctcttat aaatttacca ttttcatcac
     4501 gtttaaaaat ttttttattg gtaaaagaat ctactatttt ttgaaattct tcctcgctaa
     4561 aaccactgaa ttcaaggtat tttttaatag cctttttagg gggcttgcca tcgtattttt
     4621 gtaccaaacg caccccttct tcacggctga tataacctaa acgaatatcc aaacaagcat
     4681 tatccgttgc tctaccaaag ccgtatttgc agtattttaa ataatcatgc acatgattag
     4741 aataacaatc taaattttca aaattttcat aagtagtctc aacaggatga tctagagtta
     4801 aaaaaccata ttttttagaa atttcaagaa tttttttata atcccattta aaataatacc
     4861 ctaaaaatag cccagtaacc cctactcttt gaagttcttc atcacttgga taagtatata
     4921 aaaacaaatc tttttcagtg ataccattta ccccaagcat atcagaagca cgatttccta
     4981 aaagcccgcc aaattcttca agccactctc tgcctaaaat atttttattt ttactactcg
     5041 caggaccgcc atactctatc tgcggacttt ctccccagat gatcaaaggc actccaaaat
     5101 ttaccgctat gcgtggaaca gaagtaaaaa ttcccaaatg gttttgccac tcattatccc
     5161 ctgttcttat aaaagcttca cgggcaagtt tttgataaac ttttggatca cgcttgatat
     5221 ggatcaaatc cacgccaaga tgatttaaat tgtctaaatt tttgcgccct attttcgtag
     5281 gtacgctagg ctcaaaacac acacacaaag gattaagtcc aagttcaagc attttaacca
     5341 cttgaaaagt agaatctttt ccgccactta ctccgataac acaatcataa acaggatgtt
     5401 ttttgtattt ttttataagc tcaaaaaatt ctttttctct ttcttgccaa ttaatatttt
     5461 gatttttagc ttcttgagaa cgacaagcat cacaaacacc ttcttcatca aaatgtaaat
     5521 caggcttagt atctggcatc acacattttt tacaaaattt cataaatttc ctttaattag
     5581 tctta
//
LOCUS       DAPIYB010000092         5326 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.093, whole genome shotgun sequence.
ACCESSION   DAPIYB010000092 DAPIYB010000000
VERSION     DAPIYB010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5326
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.093"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..1234
                     /locus_tag="RJ318_001507"
     CDS             <1..1234
                     /locus_tag="RJ318_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HDV7431349.1"
                     /translation="NFYYRQILEKFENSYFAEDLTKVIIGIDCDYLDANELSFSEFKA
                     KYYEALSKNKICDFAGFFGVFSANFVSLFEKIPLSSKKNYDFPLFLFANAKAYLIYEK
                     NSKMFFKFGASKYFEYLKDDIEPMKKKQKNDFEILNSLEDEKNDFLKMCEKAKEYLLS
                     GDIFQVVLSKQLCIKHQVNAFDYYESLSALNPSAYMFYFPSKYGVVLGSSPEFLLKIK
                     KREIYLAPIAGTRNLENNCDLLALEKDLLSDEKELSEHKMLVDLARNDASKFGTQTRV
                     ENLFSIIKNKFVMHIVSEVYANMKEDASIFDVIEAVFPAGTLSGAPKIRALEITSELE
                     DCDRGIYGGAVGFLNFNEDITLAILIRCAFFTQDKAYLASGAGIVLQSESQKEYAEIC
                     AKRKALLVAFENLKKENQ"
     gene            1231..2832
                     /gene="trpD"
                     /locus_tag="RJ318_001508"
     CDS             1231..2832
                     /gene="trpD"
                     /locus_tag="RJ318_001508"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDV7431350.1"
                     /translation="MILLIDNYDSFVFNVKSMLEQLSNDEILVRRNDAISLSEIKNLN
                     PTHIILSPGPKHPSQSGICLEIFKARLNIPVLGICLGHQALALAFDSLVVKMQEPMHA
                     KNSLIKQCRENELFSNLPSNFSVMRYHSLEVKQLSDELEILALDEKGVIMALGHKNLP
                     YYGVQFHPESYFSEYGLQLFSNFLKQDIKKPQKQENPLSFYLQKMSENHFLQSDDFEQ
                     ICKIIMSKDYEILQVVALLILITEKSLNEKSLSAFVRQILRYSQTFSDESEMIDICGT
                     GGDGFKSINVSTTSAFILAALGVKVAKHGNRAISSSSGSTDVLEALNITTPNTLESVL
                     KQLNNQGLSFLHAPFFHPLVGELKEIRSRLGVRTVFNVLGPLLHPNLKLKYQLMGNYH
                     APVHRLLIEVLKNLGRKKALVVRGNDGMDELSICDESKIYELCEGEILEYSICPEQFG
                     FKRAFHSEIIGSSAYDNAKDLKDILSGRMQGAKFDLVVLNAMFALYTANKASSPLVAK
                     DMILEAIYSGKVIEYFKEYQAYAKA"
     gene            2819..3418
                     /locus_tag="RJ318_001509"
     CDS             2819..3418
                     /locus_tag="RJ318_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HDV7431351.1"
                     /translation="MLKLKICGIKDEKNAKDLAFLNIDFFGLIFAKSPRRVSLEQARN
                     LSAIFHEKDKKVVGVFVDENLEQILRCIKEAKLDGIQIYRTITKEEFEILKVQNVFVW
                     QVISVENSLDLKSEIFANLVLFDAKGILKGGNGISFDWTLLGSYTKDFILAGGIGLDN
                     VHKAVKTGAKILDLNSKLEDEKGLKDINKIKQILKELKK"
     gene            3415..4593
                     /gene="trpB"
                     /locus_tag="RJ318_001510"
     CDS             3415..4593
                     /gene="trpB"
                     /locus_tag="RJ318_001510"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDV7431352.1"
                     /translation="MKKAYYGDFGGQFLPESAMFALNELEGAFLKFSKDKLFKKELNE
                     LLKTYVGRPTPLYFARNLSKKYQHEIYLKREDLNHTGAHKINNAIAQALLAKKMGKKK
                     IIAETGAGQHGLATATAAALLGLECEIYMGATDVQRQALNVYKMELLGAKIHAVQSGL
                     KTLKEATTAAIQAWVGDIKNIFYVVGSAVGPYPYPKMVMHFQSIIGKECKMQLQKLNK
                     KVDYIIAAVGGGSNAAGIFYDFIKDENVKLIGIEAGGLGIDTPYHAATLNKGKTGIIH
                     GMKTKVLQDDLGNILPVHSVSAGLDYPGIGPLHAFLFESKRAQYHAISDEECMQALKL
                     LCKEEGIIAAIESSHALAFLEKLCPTLKKKSVIVVNLSGRGDKDMQMIRDYKKGVIYG
                     "
     gene            4586..>5326
                     /locus_tag="RJ318_001511"
     CDS             4586..>5326
                     /locus_tag="RJ318_001511"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDV7431353.1"
                     /translation="MVDFRKFYKENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILEL
                     GVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGL
                     EKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKH
                     AKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRKVA
                     DGVIVGTSIVKCFKQGNLDIIMKDIEEIF"
BASE COUNT         1875 a          594 c         1050 g         1807 t
ORIGIN      
        1 aaatttttat tacagacaaa tccttgaaaa atttgaaaat tcttattttg cagaggattt
       61 gactaaggta attataggga ttgattgtga ttatttagat gctaatgaat tatcctttag
      121 cgagtttaag gcaaaatatt atgaagcttt aagcaagaat aaaatttgcg actttgctgg
      181 attttttgga gtttttagtg caaattttgt atctttgttt gaaaaaattc cactttcttc
      241 taagaaaaat tatgattttc ctttattttt atttgccaat gctaaggctt atttgattta
      301 tgagaaaaat agcaagatgt tttttaaatt tggtgcttca aaatattttg aatatttaaa
      361 agatgatatt gaaccaatga aaaagaaaca aaaaaatgat tttgaaattt taaattcttt
      421 agaagatgaa aaaaatgatt ttttaaaaat gtgcgaaaaa gccaaagaat atcttttaag
      481 tggagatatt tttcaagtgg tcttaagtaa gcaactttgt atcaaacatc aagtaaatgc
      541 ttttgattat tatgagagtt taagtgcttt aaatccaagc gcttatatgt tttattttcc
      601 aagtaaatat ggtgttgttt tgggttcttc tccagagttt ttattgaaaa ttaaaaaaag
      661 agagatttat ttagccccta ttgctggaac tagaaatttg gaaaataact gtgatctttt
      721 agctttagaa aaagatcttt taagcgatga aaaagaactt agtgaacata agatgcttgt
      781 agatttagca agaaatgatg cttctaaatt tggcactcaa acaagagtgg aaaatctttt
      841 ttctattatt aaaaataaat ttgtaatgca catagtgagt gaagtgtatg ccaatatgaa
      901 agaagatgcg agtatttttg atgtgattga agcagttttt ccagcgggaa ctttaagcgg
      961 agctcctaaa ataagagctt tagagatcac tagcgagctt gaagattgcg atcgtggaat
     1021 ttatggtggt gcggtaggat ttttaaattt taacgaagac ataactttag cgattttaat
     1081 ccgttgcgct ttttttactc aagataaggc ttatttggca agtggggcgg gtattgtttt
     1141 gcaaagtgag agtcaaaaag aatatgcaga aatttgtgct aaacgcaagg cgcttttggt
     1201 agcttttgaa aatttaaaaa aggaaaatca atgatacttt taattgataa ttatgattct
     1261 tttgttttta atgttaaaag catgttagag caactcagca atgatgaaat tttagtaaga
     1321 agaaatgatg caatttctct gagtgaaatt aaaaatttaa atcctactca tattatttta
     1381 agtcctggtc caaagcatcc aagtcaaagt gggatttgtc ttgaaatttt taaagcaagg
     1441 cttaatatcc ctgttttggg catttgctta ggacatcaag ctttagcttt agcttttgat
     1501 tctttagtgg ttaagatgca agagcctatg catgcaaaaa attctttgat aaaacagtgc
     1561 agggaaaatg aattattttc taatttgcct tcaaatttta gtgtaatgcg ttatcattct
     1621 ttagaggtta aacagcttag tgatgagctt gaaattttag cccttgatga aaagggtgtg
     1681 attatggctt tgggacataa aaatttacct tattatggtg tgcaatttca tcctgaaagc
     1741 tattttagtg aatatggctt gcaacttttt tctaattttt taaaacaaga tataaaaaaa
     1801 ccacaaaaac aagaaaatcc tttaagtttt tatttgcaaa aaatgagtga aaatcatttt
     1861 ttacaaagcg atgattttga gcaaatttgt aagattatta tgtctaaaga ttatgaaatt
     1921 ttacaagtag tggctttgtt gattttaatc actgaaaagt ccttaaatga aaaatcttta
     1981 agtgcttttg taagacaaat tttaagatat tctcaaactt ttagtgatga gagtgagatg
     2041 attgatattt gtggaacagg tggagatggt tttaaaagta tcaatgtttc tacgactagt
     2101 gcttttattt tagcagcttt aggagtaaaa gtagccaaac acggaaatcg tgccatttca
     2161 agttctagcg gaagtacaga tgtgttagaa gctttaaata taactactcc aaacacttta
     2221 gaatcagttt taaaacaact aaataatcaa gggcttagtt ttttacatgc tccatttttt
     2281 catcctttag taggagaact taaagagatc agatcaagac ttggagtaag aacggttttt
     2341 aatgttttag gtcctttatt gcaccctaat ttaaagttaa aatatcaact tatgggaaat
     2401 tatcacgcac ctgtgcatag gcttttgata gaggttttaa aaaatttagg acgcaaaaaa
     2461 gctttagtgg taagaggaaa tgatggtatg gatgagctta gtatttgcga tgaaagtaaa
     2521 atttatgagc tttgtgaagg agaaatttta gagtattcta tctgtcctga acaatttggt
     2581 tttaaaagag cttttcatag tgaaatcata ggatctagtg catatgacaa cgctaaagat
     2641 ttaaaagata ttttaagcgg tagaatgcaa ggggcaaaat ttgatttggt agttttaaat
     2701 gctatgtttg cactttatac agccaataaa gcaagttcgc ctttagtggc taaagatatg
     2761 attttagaag ccatttattc aggtaaggtt atagaatatt ttaaggagta tcaagcttat
     2821 gctaaagctt aaaatttgtg gtattaaaga tgaaaaaaat gccaaagatt tagctttttt
     2881 aaatattgat ttttttggac ttatttttgc taaaagtcca agaagagtga gtttagaaca
     2941 agcaagaaat ttaagtgcaa tttttcatga aaaagataaa aaagttgtcg gtgtttttgt
     3001 agatgaaaat ttggaacaaa ttttaagatg tattaaagaa gctaagcttg atgggataca
     3061 aatttatcgc actattacca aagaagaatt tgaaatttta aaggtgcaaa atgtttttgt
     3121 ttggcaggtg attagtgtgg aaaatagttt agatttaaaa agtgaaattt ttgctaattt
     3181 agtacttttt gatgctaagg gaattttaaa gggcggtaat ggaataagtt ttgattggac
     3241 tttattaggt tcttatacta aagattttat attagccgga ggcataggtt tggataatgt
     3301 tcataaggct gtaaaaacgg gagctaaaat tttagatctt aattcaaaac ttgaagatga
     3361 aaaaggctta aaagatatca acaaaataaa acaaatttta aaggagttga aaaaatgaaa
     3421 aaagcgtatt atggggattt tggtgggcag tttttgcctg aaagtgcaat gtttgcttta
     3481 aatgagctag aaggtgcttt tttgaaattt tctaaagata aactctttaa aaaagaatta
     3541 aacgagcttt taaaaactta tgtagggcgt cctactccac tttattttgc tagaaattta
     3601 agcaaaaaat atcagcatga aatttattta aaacgcgagg atttaaatca taccggagca
     3661 cataaaatca ataatgccat cgctcaagcc cttttagcaa aaaaaatggg aaagaaaaaa
     3721 atcatagcag aaacaggagc aggtcaacac gggcttgcaa cagccactgc agcagcactt
     3781 ttaggacttg aatgtgaaat ttatatgggg gcaaccgatg tgcaaagaca ggctttaaat
     3841 gtttataaaa tggagctttt gggtgctaaa attcatgcag tacaaagtgg gcttaaaact
     3901 ctaaaagaag ctactactgc ggctattcaa gcttgggttg gagatattaa aaatattttt
     3961 tatgtggttg gaagtgcggt aggtccttat ccttatccta aaatggtaat gcattttcaa
     4021 agtattatag gaaaagaatg caaaatgcaa cttcaaaaac tcaataaaaa agtagattat
     4081 attatcgcag ctgttggggg tggaagcaat gcagctggga ttttttatga ttttatcaaa
     4141 gatgaaaatg ttaaacttat aggtattgaa gcaggggggc ttggcattga tacgccttat
     4201 catgcagcga ctttaaataa gggaaaaaca ggcattattc acggtatgaa aaccaaggtt
     4261 ttacaagatg atttaggcaa tatcttgcct gtacatagtg tttctgcagg gcttgattat
     4321 ccaggaattg gtcctttgca tgctttttta tttgaaagca aaagagcgca atatcatgct
     4381 ataagtgatg aagaatgtat gcaggcttta aaattacttt gtaaagaaga aggtattatt
     4441 gcagcgattg aaagttcgca tgctttggca tttttagaaa aactttgtcc aactttaaaa
     4501 aagaaaagcg tgatagtagt aaatctttca ggcaggggag ataaagatat gcaaatgatt
     4561 agagattata aaaaaggggt gatttatggt tgattttaga aaattttata aagaaaatgc
     4621 aaatgtggct tatacggttt taggttatcc aaatcttcaa acaagtgaag cttttttgca
     4681 aagattggat caaagtccta ttgatatttt agaacttggt gttgcttata gtgatcctat
     4741 tgccgatggt gagattattg cagatgcggc aaaaatagct cttgatcaag gcgtggatat
     4801 tcatagtgtt tttgagcttt tagctaggat aaaaactaaa aaagctttgg tttttatggt
     4861 ttattataat ttaatttttt cttatggctt ggaaaaattt gtgaaaaaag caaaatcttt
     4921 agggatttgt gctttgattg tgcctgaatt gagttttgaa gaaagtgatg atttgattaa
     4981 agagtgtgaa agatataata tagctttaat tacacttgta agtgttacaa cccctaaaga
     5041 aagggttaaa aagttagtaa aacatgctaa aggttttatt tatttattag caagcatagg
     5101 tattacaggt acgaaaagtg tcgaagaagc aatcttacaa gataaagtaa aagaaatcag
     5161 atcttttaca aatttgccta tttttgtagg ctttggcatt caaaataatc aagatgtaaa
     5221 aagaatgaga aaagttgctg acggagtgat tgtgggaact agcatagtaa agtgttttaa
     5281 acaaggaaat ttggatataa taatgaaaga tattgaagaa attttc
//
LOCUS       DAPIYB010000093         5047 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.094, whole genome shotgun sequence.
ACCESSION   DAPIYB010000093 DAPIYB010000000
VERSION     DAPIYB010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5047
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.094"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(59..568)
                     /locus_tag="RJ318_001512"
     CDS             complement(59..568)
                     /locus_tag="RJ318_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 domain-containing protein"
                     /protein_id="HDV7431354.1"
                     /translation="MHFTIFHIIAFIILLICFALICILIFLKVKQKEMALISYTIATI
                     FTALLIYSIFLTINQFTTQADLSKLTYTRDLRHESVIVSGKVQNLTKFEIKKCYLILS
                     ILNQQQVGGEIFNDKNIRNAKMQNTSVSYTIEIIDTLPGNTYKEFRASVPFPPTFNNP
                     EFYHTLKCI"
     gene            complement(568..1098)
                     /locus_tag="RJ318_001513"
     CDS             complement(568..1098)
                     /locus_tag="RJ318_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 domain-containing protein"
                     /protein_id="HDV7431355.1"
                     /translation="MEKLREIVLFYTTHLYLVDYMLILLVFFLFTCVLLLCVFLRHRP
                     IAALFIIAFDIIICFLVYIYGYKLIDNEVRTRKIAITDQKMIQSSNDLIVDFNITNNS
                     KNNFKECKITAKIFADKIPNDNIIEEYKKKFIPFRQKSREIKDLKKNATQVQRIAFEN
                     FNYENNYTIRLVSECF"
     gene            complement(1110..2198)
                     /locus_tag="RJ318_001514"
     CDS             complement(1110..2198)
                     /locus_tag="RJ318_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HDV7431356.1"
                     /translation="MPTDLNDYFNKKNGNSNNNGNNNRQNFNFKAPEFNFKGFGKFSP
                     FVYGVIIIILFLIVAKPFMVINSGEMGIKSTTGKYDPNPLEPGLHFFLPFVQKITIID
                     TRVRQINYASIEGSNENLSSGSGVINKNSISVLDSRGLPVSIDVTVQYRLNPLQVPQT
                     IATWSLNWENKIIDPVVRDVVRSVVGKYTAEELPTNRNTIATQIEEGIRKTIEAQPNE
                     PVELRAVQLREIILPSKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGEAN
                     ATIISAKGKAMAVKIEADAQAYSNKEIANSLNTPLLNLKQIETQKEFNEALKVNQDAK
                     IFLTPGGAVPNIWVDTKDAKKQSAANMN"
     gene            complement(2211..3125)
                     /gene="ilvE"
                     /locus_tag="RJ318_001515"
     CDS             complement(2211..3125)
                     /gene="ilvE"
                     /locus_tag="RJ318_001515"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HDV7431357.1"
                     /translation="MISADKIWMDGKLVDFKDATLHFLTHSLHYGNAVFEGTRAYKTD
                     KGLAIFRLEDHTKRLLESAKITLLNCPFSQKELENAQIELLKANNFKSNVYIRPLIFL
                     GDGVMGLYHIKAPVRVGIAAWEWGAYLGEEGLEKGIKVKISSFARNSVKSCMGKAKAS
                     ANYLNSQIAKFEAIEAGYEEALMLDEEGFIAEGTGECFFIVKDGVLITPPNDFSLKSI
                     TQDTVLKIAHDLGITVLRQRISRDEVYTADEAFFTGTAAEITPINNIDARIIGNGLRG
                     SVTKKLQDAYFDVVYGRNEKYASMLTYI"
     gene            3302..3508
                     /locus_tag="RJ318_001516"
     CDS             3302..3508
                     /locus_tag="RJ318_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HDV7431358.1"
                     /translation="MPLVNIKLAKPSLSKEQKAELIADITELLSTKYNKSKERVVVVL
                     EDVENYDIGFGGESVEAIKAKASK"
     gene            3505..3960
                     /gene="bcp"
                     /locus_tag="RJ318_001517"
     CDS             3505..3960
                     /gene="bcp"
                     /locus_tag="RJ318_001517"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDV7431359.1"
                     /translation="MSLNIGDKAPQFELLNQDGVKIALKDFIGKKVILYFYPKDNTPG
                     CTTEACDFSANYDKFGGKNAVIIGISPDSVASHEKFISKFDLKHILLSDSEKEVAKAY
                     GALGLKKNYGKEYEGLIRSTFVIDETGKIAQIYSNVRVKDHALKVLESL"
     gene            3960..>5047
                     /locus_tag="RJ318_001518"
     CDS             3960..>5047
                     /locus_tag="RJ318_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDV7431360.1"
                     /translation="MLVHICCSVDSHYFIEELRKTYPDEKIIGYFYDPNIHPLSEYEL
                     RFLDVKRSCDKLGIKLYKGEYEYEKWLNAVRGYEDEPEKGARCEICFDVRMGSSVKFA
                     AKIGEKKLTTTLLTSPKKDLEQLKNALQKECEPYGVEFLAPDFRKNGGTQRQFALAKK
                     EMLYHQNYCGCIYGLKKQKQDKNFIDELMSSVNKQILPVSIEARIALYKKVVLWEKKG
                     IKFEILREKFLNYRLLSALIKLDKKPVKSHILFYSHFKNAYTRFSLDEENLKQNLKEG
                     FYRSTKDEIVLVEFWRFNAFFKNKWKNFEDFLKKPLSVQAEIKWRNKLFGTYNLSPII
                     ILENILPSRYEVIAKSEIYHDNQEVLVK"
BASE COUNT         1713 a          687 c          825 g         1822 t
ORIGIN      
        1 tgttttgtta tgtgaataat taatgtattt tagaattttt gctagttgat ttcttgaatc
       61 aaatacattt taaggtgtga taaaattcag gattattaaa agttggagga aaaggaacgc
      121 tagctctaaa ttctttatag gtattacccg ggagtgtgtc tatgatttct atagtataag
      181 aaacacttgt attttgcatt ttagcgttac ggatattttt atcattgaaa atttcacctc
      241 ctacttgttg ttggtttaat atgctaagta tcaaatagca ttttttgatt tcaaatttag
      301 taagattttg aacttttcca cttactataa cgctttcatg tcttagatct cttgtgtagg
      361 ttagtttgct aagatcggct tgagtggtga attgattgat tgttagaaaa atagaatata
      421 tcaaaagtgc ggtaaaaata gtagctatgg tataagaaat caaagccatt tctttctgtt
      481 tgacttttag aaagattaaa atacaaatca aggcaaagca aataagtaaa atgataaaag
      541 ctataatatg aaaaatcgta aaatgcatta aaaacactcc gaaactaagc gtatggtata
      601 gttattttca tagttaaaat tttcaaaagc aattctttga acttgggttg cgtttttctt
      661 tagatcttta atttctctac ttttttgtct aaaagggata aatttctttt tatattcttc
      721 tatgatatta tcattaggta ttttatctgc aaaaatttta gctgtaattt tacattcttt
      781 aaaattattt tttgaattat ttgtaatgtt aaaatcaaca attaaatcat ttgagctttg
      841 tatcattttt tgatctgtaa tagcgatttt tcgagttctt acttcattgt ctattagttt
      901 atacccatag atataaacta aaaaacaaat aataatatca aatgcaataa taaaaagtgc
      961 tgctataggt ctatggcgta aaaatacaca aagaagtaaa acacaagtga agagaaaaaa
     1021 aactaataaa atcagcatat aatctactaa atataaatga gtagtgtaaa aaagcacgat
     1081 ttctcttagt ttctccactt gtgtatcctt tagttcatgt tggcagcact ttgcttttta
     1141 gcatctttgg tatcaaccca aatgtttggc actgctccac ctggagttaa gaaaatttta
     1201 gcatcttgat tgacttttaa agcttcatta aattcttttt gagtttcaat ttgttttaaa
     1261 tttagcaaag gggtgtttag gctgtttgcg atttctttgt tagaataagc ttgtgcatct
     1321 gcttctattt taacagccat agctttacct ttggcgctga ttatggttgc atttgcttcc
     1381 ccttcagcta aagcagcttt ttttaaggct tcttgattag ctctttctac ttcatattta
     1441 gttctttcag cctcttgttt tgcaatttgc acgcgttcga tttgttcttt tacttttgaa
     1501 ggtaaaataa tttctctaag ttgtacagcg cgaagttcta caggttcatt tggttgggct
     1561 tctatggttt ttcttatacc ttcttctatt tgagtggcta ttgtattacg attagtagga
     1621 agttcttcgg ctgtgtattt tcctacaaca cttcgcacta catcacgaac aactggatcg
     1681 ataattttat tttcccaatt taagctccaa gtagctatag tttgaggaac ttgcaaagga
     1741 tttaagcggt attgtactgt aacatcaata gatacaggca atccacgaga gtcaagtaca
     1801 gaaatactat ttttattaat aacacctgaa cctgaagata aattttcatt acttccctct
     1861 atagaagcat agttgatttg tcttactcta gtatcgatta tggttatttt ttgtacaaaa
     1921 ggtaagaaaa agtgaagtcc tggttctaat ggatttgggt catatttacc tgttgttgat
     1981 ttaatcccca tttccccaga atttatcacc ataaaaggtt ttgcaacgat taaaaataag
     2041 ataataataa tcaccccata aacaaatgga gagaattttc caaaaccttt aaaattaaat
     2101 tctggtgctt tgaaattgaa attttgacgg ttgttgtttc cgttattgtt agaatttcca
     2161 ttttttttat tgaaataatc attcaaatca gttggcattt atttcctttt ttaaatataa
     2221 gttagcatag atgcgtattt ttcattgcgt ccataaacta catcaaaata agcatcttga
     2281 agttttttag ttacagatcc tcttaaacca tttcctatta ttcttgcatc aatattatta
     2341 ataggtgtga tttcagcggc tgttccggta aaaaatgctt catcagcagt ataaacttca
     2401 tctcttgaaa ttctttggcg aagcacagta ataccaagat catgagcgat tttaagcact
     2461 gtatcttgag taatgctttt taaagaaaaa tcatttggag gtgtgattaa aaccccatct
     2521 tttacaataa agaaacattc tcctgttcct tctgcgataa aaccttcttc atcaagcatc
     2581 aaagcttctt catagcctgc ttcaatagct tcaaattttg caatttgaga gttaagataa
     2641 ttcgcacttg ctttagcttt tcccatgcat gatttaacac tatttcttgc aaaagacgaa
     2701 atttttactt ttataccttt ttctaaacct tcttctccaa ggtaagcacc ccattcccaa
     2761 gctgcaatcc caactcttac aggagctttt atatgataaa gtcccataac tccatcgcct
     2821 aagaaaatca aagggcggat atagacattg cttttaaaat tgtttgcttt taagagttca
     2881 atttgtgcat tttcaagctc tttttgagaa aaaggacaat ttaaaagagt aatttttgca
     2941 gactctaaaa gtcttttggt gtgatcttca agtctgaaaa ttgctaagcc tttatctgtt
     3001 ttataggctc tagttccttc aaaaacagca ttgccataat gcaaagaatg ggttaaaaag
     3061 tgcaaagttg catctttaaa atcaactaat tttccatcca tccaaatttt atctgctgag
     3121 atcatttttt taccttttat agttgtttat ttcttaaaaa atattatttt aagaataaat
     3181 cgggatttta tcaaaaatat actaataata agcttttatt aaattaagct tttttgttaa
     3241 aaaaaatatt aggtattttt tgaaataatt atgaaaaatt atcgttaaaa aaggagaaat
     3301 tatgccatta gtaaatatca aattagcaaa gccgtcttta agcaaggagc aaaaagcgga
     3361 acttatagct gatattaccg aacttttaag cacgaaatat aataaaagta aagaaagagt
     3421 tgttgtggtt ttagaagatg tggaaaatta tgacataggc tttggcggag aaagtgtaga
     3481 agctatcaaa gcaaaggcaa gtaaatgagt ttaaatatag gagataaggc acctcaattt
     3541 gagcttttaa atcaagatgg ggtaaaaata gcattaaaag attttattgg caaaaaggtg
     3601 attttgtatt tttatccaaa agataatacc ccaggttgca ctacagaagc ttgtgatttt
     3661 agtgcaaatt atgataaatt tggtggtaaa aatgcggtga ttattggtat cagtcctgat
     3721 agcgtggcaa gtcatgaaaa atttatctct aaatttgatt taaaacatat tttacttagc
     3781 gatagtgaaa aagaagttgc taaagcttat ggagctttgg ggcttaagaa aaattacgga
     3841 aaagaatacg aaggtcttat tcgttctact tttgttatcg atgaaacagg taagattgct
     3901 caaatttata gtaatgttcg tgtaaaagat catgctttaa aagtgcttga aagtctttaa
     3961 tgctagtaca tatttgttgt agcgtggata gtcattattt tattgaagaa cttagaaaga
     4021 cttatcctga tgaaaaaatt ataggatact tttatgatcc aaatatccat cctttaagcg
     4081 aatacgaact aagattttta gatgtaaaaa gatcttgtga taaacttggt attaagcttt
     4141 ataaaggtga gtatgagtat gaaaaatggc ttaatgctgt gcgtggttat gaagatgagc
     4201 ctgaaaaggg tgcaaggtgt gaaatttgct ttgatgtaag aatgggatct agtgttaaat
     4261 ttgctgctaa aataggagaa aaaaagctta ctactacgct tttaaccagc cctaaaaaag
     4321 atttagaaca gttaaaaaat gctttacaaa aagaatgtga gccttatgga gtagagtttt
     4381 tagctcctga ttttcgtaaa aatggcggca ctcaaagaca gtttgcttta gcaaaaaagg
     4441 aaatgcttta tcatcaaaac tattgcggct gcatttatgg gcttaaaaaa caaaaacaag
     4501 ataagaattt tattgatgaa ttaatgtctt ctgtaaataa gcaaatttta cctgtaagta
     4561 tagaagcaag aatagctctt tataaaaaag tagttttatg ggaaaaaaaa ggtataaaat
     4621 ttgaaatttt aagagagaaa tttttaaatt atcgtctttt aagtgctttg ataaaattag
     4681 ataaaaagcc cgttaaatct catattttat tttattcgca ttttaaaaac gcttatacaa
     4741 gattttcttt ggatgaggaa aatttaaaac aaaatttaaa agaaggcttt tatagaagta
     4801 ctaaagatga aatagtttta gtggaatttt ggcgttttaa tgcatttttt aaaaacaaat
     4861 ggaaaaattt tgaagatttt ttaaaaaaac ctttaagtgt tcaagcagaa attaaatggc
     4921 gtaataaatt gtttggaact tataatctta gtcctattat catccttgaa aatattttac
     4981 cttcaagata tgaagtgata gcaaaaagtg aaatttatca tgataatcaa gaggtgcttg
     5041 taaaaat
//
LOCUS       DAPIYB010000094         5023 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.095, whole genome shotgun sequence.
ACCESSION   DAPIYB010000094 DAPIYB010000000
VERSION     DAPIYB010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5023
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.095"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            93..1088
                     /locus_tag="RJ318_001519"
     CDS             93..1088
                     /locus_tag="RJ318_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDV7431361.1"
                     /translation="MKKILSLSVASLALCGALNAADLKIAGSSTVYPFTSFVAEEYAS
                     IKNTKTPIVESLGTGGGFKVFCEGTTDISNASRPMKLSEFETCKKAGVTDIVGIMIGY
                     DGIVLAQNKTNAPLNITKKELFLALAKEIPQNGKLIPNPYTNWNQINKNLPNRKISVY
                     GPPSSSGTRDTIEELVMSDVSKKIPEYKGEYKTIRQDGAYIPSGENDNLIVSKLTIDK
                     DAFGIFGYSFLVSNSDKINAANIDGVTPSEESIADEKYELARSLFIYINAKKNPKEAF
                     EFAKIYMSDDLAKSGGELEKIGLVPLSDDKLKASQKHVEDRKILNDELVKAGKVF"
     gene            1098..2012
                     /gene="pstC"
                     /locus_tag="RJ318_001520"
     CDS             1098..2012
                     /gene="pstC"
                     /locus_tag="RJ318_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDV7431362.1"
                     /translation="MLKEKIIKFALFLCAFVSVIVSFAIMLTILIEALKFFQKESVVT
                     FLFSSQWAADAAFMNADGTSKQGVFGALSLFWGTFYISLIAMLTALPLGVMCAIYLGV
                     FAGKKSKNYLKPILEIIAGIPTVVFGFFAAIVVAPFIVWFFSLFGIQASFQSALGAGF
                     IMGIMIVPIVASLSQDCIEAVSEKRINGAYALGMTKKEVVFAVILPEAIPGIVAACLL
                     GLSRALGETMIVVMAASLRPNLTLNFLEDMTTVTVKIVEALSGDQAFDSSLALSAFSL
                     GLVLFVITLIINMFSVYLINRFHKRKNL"
     gene            2009..3097
                     /gene="pstA"
                     /locus_tag="RJ318_001521"
     CDS             2009..3097
                     /gene="pstA"
                     /locus_tag="RJ318_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012857620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDV7431363.1"
                     /translation="MKKLFKKRQKASKSFKRLCKMGLYINLIFLCIFLGSVAYLGFPA
                     FKQTYIFVEANRNSPSYDLLSRAEQRKIRTGQIAEKSWLLVNSEVDQYMKQKYNRLSE
                     KQRTLVDDLVQKGEIELKFNSNFFLNGDSKSPENSGILSSVIGTLLVMLVCMVVSVPI
                     GVAAAIYLEEFAPQNILTHFIEVCINNLASIPSILFGLLGLGVFINLFGMPRSSALVG
                     GLTLAIMSLPIIIVSTKAALKSVDINMKNAAYALGMTKVQMVKGIMLPLAMPMILTGS
                     ILTLAGAIGETAPLMIIGMIAFIPDVASSIFDPTSVLPAQIYSWSAMPERAFLERTAA
                     GIIVLLGLLVVLNLSAILLRKYFQGKLK"
     gene            3094..3834
                     /locus_tag="RJ318_001522"
     CDS             3094..3834
                     /locus_tag="RJ318_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HDV7431364.1"
                     /translation="MIAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTF
                     LRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKSIYENISYA
                     PKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIK
                     PKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGE
                     LIEFGESKEFFENPKQEKTKAYLSGAFG"
     gene            3895..>5023
                     /locus_tag="RJ318_001523"
     CDS             3895..>5023
                     /locus_tag="RJ318_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
                     /protein_id="HDV7431365.1"
                     /translation="MIINQIYSIDSCDDVELNIKRGSKLEFRLTYDDSKEIEAIVCII
                     SGLGGDIDDNLYIEEYCARNYNVAVLSVNYHCIGNRPQTGASFYINELDRLILKTSLE
                     AIGIQLPVDMQNLKTYDEFYCVVDFVNKFIEKLKKEKELSEDYCLYLSVGLEPTKNEY
                     QNYGIMQAMDIINAILYININLPFKVSNMSTVSRMGGGIKTILIGVSHGGYLANLCAK
                     ISPWNIDVVLDNSSNVTLDNDLWRFIGFGREIDYVKYCSVGITYMFKNIKLAAFDKTY
                     WTTNKQSPYYFSNARKIVREPLNKEHLKIQSLYPKPKYIAYHSKFDQYVLLEKRENYF
                     NILRELGFEVDFIKITDEKEIDGKFIKNLEHGCGIPMKLLIK"
BASE COUNT         1735 a          631 c          945 g         1712 t
ORIGIN      
        1 atatttaaga aaaatacaaa ataaaaaatg tttccaaaat gtttccaagt ttttttaaac
       61 ttccattact tttttaaagt taaggagaaa aaatgaaaaa aattctatct ttaagtgtgg
      121 caagtcttgc actttgtggt gctttaaatg cagcagattt aaaaatcgca ggttcatcga
      181 ctgtgtatcc ttttacttct tttgtagctg aagaatatgc ttcgattaaa aatacaaaaa
      241 ctcctatagt agagagcttg ggaacagggg gtggatttaa ggtattttgt gaaggaacta
      301 ctgatatttc taatgcttca agacctatga aattaagcga atttgaaact tgcaaaaaag
      361 caggggtaac tgatatagta gggattatga taggttatga tggtatagtt ttagctcaaa
      421 ataaaaccaa tgctccatta aatatcacaa aaaaagaact tttcttagca ttagcaaaag
      481 aaattccaca aaatggaaaa cttataccaa atccttatac aaactggaat caaatcaata
      541 aaaatttacc aaatcgtaaa attagtgttt atggtccacc atcaagttca ggaacaagag
      601 atactataga agagcttgta atgagtgatg tgtctaaaaa aattcctgag tataaaggcg
      661 agtataaaac catacgccaa gatggtgctt atatcccaag tggcgaaaat gacaatctaa
      721 tcgtttcaaa acttactatt gataaagatg cttttggaat ttttggttat agctttttgg
      781 tgagcaattc agacaaaatc aatgctgcta atatcgatgg tgttacgcca agcgaagaaa
      841 gcatcgcaga tgaaaaatac gaacttgcaa gaagtttgtt tatttatatc aatgctaaga
      901 aaaatccaaa agaagccttt gaatttgcaa aaatttatat gagtgatgat ttggcaaaaa
      961 gtggtggaga gcttgaaaaa ataggacttg ttcctttaag tgatgataaa ttaaaagctt
     1021 ctcaaaaaca tgtagaagat agaaaaattt taaatgatga gcttgtaaaa gctggaaaag
     1081 ttttttaagg aaaaactttg ctaaaagaaa aaataatcaa atttgcactt tttttatgtg
     1141 cttttgtaag cgtgatagta agctttgcta tcatgcttac aattttaatt gaagctttaa
     1201 aattctttca aaaagaaagt gttgttacct ttttattctc aagtcagtgg gcagctgatg
     1261 cagcttttat gaatgcagat ggcacgagca aacaaggtgt ttttggagca ctatcgcttt
     1321 tttggggaac tttttatatt tcattgattg ctatgctaac ggctttacct ttaggggtta
     1381 tgtgtgctat atatttaggt gtttttgctg gcaaaaaatc taaaaattac ttaaaaccta
     1441 ttttagaaat tattgcaggg attcctactg ttgtttttgg attttttgcg gctatagttg
     1501 tagcgccttt tatagtgtgg tttttttctt tatttggcat acaagcaagt tttcaaagtg
     1561 ctttaggcgc aggttttatc atggggatca tgatagtacc tatagtggct tctttatctc
     1621 aagattgcat tgaagcagta agcgagaaaa ggattaatgg cgcttatgct ttaggtatga
     1681 caaaaaaaga agtggttttt gctgtgattt tacctgaggc tattcctggt atagttgcag
     1741 cttgtctttt aggactttca agagccttag gcgaaactat gatagtggtg atggcagctt
     1801 ctttgcgtcc aaatttaact ttaaattttt tagaagatat gacaacggta acggtaaaaa
     1861 tcgtagaagc tttaagtgga gatcaagctt ttgatagttc tttggcttta agtgcttttt
     1921 ctttaggttt ggtgcttttt gtcatcactt taatcatcaa tatgtttagc gtttatctta
     1981 tcaatcgctt tcacaaaagg aaaaatttat gaaaaaactt tttaaaaaaa gacaaaaagc
     2041 ttcaaagtct tttaaaagac tttgtaaaat ggggctttat attaatttaa tttttctttg
     2101 tatcttttta ggaagtgtgg cttatcttgg atttcctgct tttaagcaaa cctatatttt
     2161 tgtagaggct aatagaaatt ctccttctta tgatctttta tctcgcgcag aacaaagaaa
     2221 aataagaaca ggacaaatcg ctgaaaaatc ttggcttttg gtaaattcag aagtagatca
     2281 atatatgaag caaaaatata atcgccttag tgaaaaacaa agaactttag tcgatgatct
     2341 tgtgcaaaaa ggcgagatag agcttaaatt taatagcaat ttctttttaa atggggactc
     2401 aaaatctcct gaaaattcag gaattttatc ttcagttata gggactttgc ttgttatgct
     2461 tgtttgtatg gttgtgagtg ttcctatagg cgttgcagcg gcaatttact tagaagaatt
     2521 tgcaccacaa aatatcctta cacattttat agaagtgtgt attaacaacc ttgcaagtat
     2581 tcctagtatc ttgtttggac ttttaggact tggagtgttt atcaatcttt ttggaatgcc
     2641 tcgttcaagt gctttagtgg gtgggcttac tttggcgatc atgagtttac ctattatcat
     2701 tgtttcaacc aaagcggcct taaaaagtgt ggatatcaat atgaaaaatg ctgcttatgc
     2761 cttaggtatg acaaaggttc aaatggtaaa aggtattatg ttacctttgg ctatgcctat
     2821 gattttaaca ggttctattt tgactttagc aggggctata ggcgagactg cacctttgat
     2881 gattatcggt atgatagcct ttatccctga tgtagctagt tcgatttttg atccaactag
     2941 cgttttacct gctcaaattt actcatggtc tgctatgcca gagcgtgcat ttttagaaag
     3001 aacagcagcg ggtattattg tgcttttagg acttttagtt gtgttaaatc ttagtgcaat
     3061 attattaaga aaatattttc aaggaaaatt aaagtgatag caaaaacaac aaatttaaat
     3121 ttattttatg gaaaaaaaca agctttattt gatatcaata tgcaaataga gcaaaacaaa
     3181 attactgcac tcatcggtgc ttcaggatgt ggtaaatcca cttttttgcg ttgttttaat
     3241 agaatgaatg ataaaattgc aaaaatcgat ggtttagtgg aaattgaagg aaaagatgtt
     3301 aaaaatcaag atgtagtagc cttgcgtaaa aatgtaggca tggtttttca acaacccaat
     3361 gtttttgtaa aaagcattta tgaaaacatc tcttatgcac caaaacttca tggtatgatt
     3421 aaaaacaaag atgaagaaga agctttggtg gtggattgct tgcaaaaagt ggggcttttt
     3481 gaagaggtta aagataaatt aaagcaaaat gccctagctc tttcaggcgg acaacaacaa
     3541 cgcctttgta tcgcaagagc tttagcgatc aaaccgaaac ttttgctttt agatgagcca
     3601 acttctgcac ttgatcctat aagttcaggc gtgattgaag agcttttaaa agaattaagc
     3661 cataatcttt ctatgatcat ggttacgcat aatatgcaac aaggcaaacg cgtagctgat
     3721 tatacagcat tttttcatct tggagagctt atagaatttg gtgaaagtaa agaatttttt
     3781 gaaaatccaa aacaagaaaa aaccaaggct tatttaagcg gtgcttttgg ataagattta
     3841 ttttttggaa atttgatgat ataattaatt aaaaatttca aaaaaaggtt taatatgatt
     3901 ataaaccaaa tttattctat agattcttgt gatgatgtag aattaaatat caaaagggga
     3961 agtaaattag aatttagatt gacttatgat gatagtaaag aaatagaagc tattgtttgt
     4021 attatatccg ggttaggtgg agatatagat gataatttat atatagaaga gtattgtgca
     4081 agaaactata atgtggctgt tttaagtgta aattatcatt gtataggtaa tcgtcctcaa
     4141 actggagcgt cattttatat taatgaactt gatagattga ttttaaagac aagcttagaa
     4201 gcaattggaa tacaacttcc tgtagatatg caaaatttaa aaacatacga tgaattttat
     4261 tgtgtagtgg attttgttaa taaatttata gagaaattaa aaaaagaaaa agaattgagt
     4321 gaagattatt gtctgtattt aagcgtaggt cttgaaccaa ctaaaaatga atatcaaaat
     4381 tatggtatta tgcaggcaat ggatattata aatgctattt tatatataaa tatcaacctt
     4441 ccttttaaag tttctaatat gtcgaccgtg agtaggatgg gggggggtat aaagactata
     4501 ttaataggtg tttcgcatgg aggatattta gccaatttat gtgcaaaaat ctctccttgg
     4561 aatattgatg ttgttttaga taattcttct aatgtgactt tggataatga tttatggaga
     4621 tttataggct ttggaaggga gatagattat gtaaagtatt gtagtgtagg tattacatat
     4681 atgtttaaga atattaaact agcagctttt gataaaactt attggactac gaataaacaa
     4741 tctccatatt atttttcaaa tgcaagaaaa atagtaagag aaccattgaa taaagaacat
     4801 ttaaaaattc aaagtttata tccaaaacca aaatatatcg cttatcattc taaatttgat
     4861 cagtatgttt tactagaaaa aagagaaaat tattttaata ttttaagaga attggggttt
     4921 gaggttgatt ttatcaaaat aactgatgaa aaagaaatag atggaaaatt tattaaaaat
     4981 ttagaacatg gttgtggtat acctatgaaa ctacttatta aaa
//
LOCUS       DAPIYB010000095         5016 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.096, whole genome shotgun sequence.
ACCESSION   DAPIYB010000095 DAPIYB010000000
VERSION     DAPIYB010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5016
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.096"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            30..638
                     /gene="plsY"
                     /locus_tag="RJ318_001524"
     CDS             30..638
                     /gene="plsY"
                     /locus_tag="RJ318_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDV7431366.1"
                     /translation="MENLIIYAFIYLLGSIPFGLILAKFFAKTDIKKEGSKSIGATNV
                     LRVVKEKNPKLAKKLAIATIILDFAKAAIPLLTLKFLHYDQALLWSVAVLAILGHCFS
                     IYLLFEGGKGIATGAGAMIVLLPLEVLTAFIVWVVIGKIFKISSLASLAALLAFVISS
                     FIFNYDLEIHTHAPVFIIAFIIVYKHLPNIKRLIFKEECKVI"
     gene            623..940
                     /locus_tag="RJ318_001525"
     CDS             623..940
                     /locus_tag="RJ318_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDV7431367.1"
                     /translation="MQSHIKIKFHFKCIIGILDFERRKKQKIIIKLKAKANEFLNYAE
                     VITKIKTWYKKEEFYTLEESLDFVSLNLKKDFPNLTNLNIKIFKPHIIKNATVGVKLK
                     KKY"
     gene            1019..1690
                     /gene="hsrA"
                     /locus_tag="RJ318_001526"
     CDS             1019..1690
                     /gene="hsrA"
                     /locus_tag="RJ318_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homeostatic response regulator transcription
                     factor HsrA"
                     /protein_id="HDV7431368.1"
                     /translation="MRILVIEDEISLNKTIIDNLNEFGYQTDSSENFKDGEYFIGIRH
                     YDLVLANWTLPDGDGAELVNTIKHKSPRTSVMIMSSKTDKETEIKALKAGADDFVTKP
                     LDFDILLARIEARLRLGGTNVIKIEDLVIDPDEEKITYKDQDIELKGKPFEVLTHLAR
                     HSDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDKPLNISTIETVRRRGYRFC
                     FPKKS"
     gene            1803..2048
                     /locus_tag="RJ318_001527"
     CDS             1803..2048
                     /locus_tag="RJ318_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HDV7431369.1"
                     /translation="MSLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECVND
                     FSEPACIVACPYECIIPDPDNVETIEELKLKHRDREF"
     gene            2048..3508
                     /locus_tag="RJ318_001528"
     CDS             2048..3508
                     /locus_tag="RJ318_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HDV7431370.1"
                     /translation="MAKKTAVVDLGSNSIRMVIFEKTSRYGFYTTCEYKRKVRLGENA
                     YNNGKILQEEAMQRAEDALAFFKQCALKHKCKKIFIVGTSALRDAPNSKNFIKRIKDN
                     LSLNIRCIDGKSESYLGGLAALNLLSPFKDGTTLDIGGGSSELCLIKNNRIISCISLD
                     IGTVRLKELFYDTGKMDSLEEFIKPILEQIPKEFYNQNLIAIGGSLRAISNSIMQKNS
                     YPLKNLHDFRYMLDEEKGHILKIFNSNLDSLINFGIKKDRFDTIKEGIFIFLKIAEKI
                     KAKQVITSGVGIREGVYLQDLLRPKITFPPNFNPSLKCLQDKFLQSKQKNKTPHFALQ
                     IFTTLKNLHKLNDNYKHTLLNAAKLCHIGEYLNFYFANEHSAHFVLGGLNYGFSHKEK
                     ALIASIIKLNGKKVNPYNLEPYKQLLPNIHTISWLNFILCLAKTLSTNEDKIDFAFAN
                     NTLYIYQENKILNLPKDELKKIAKPATIALAINQKI"
     gene            complement(3505..4302)
                     /locus_tag="RJ318_001529"
     CDS             complement(3505..4302)
                     /locus_tag="RJ318_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431371.1"
                     /translation="MRLLVLFFLILPLYSVELISFNIYDRNDRVDLMLSFDNAYNGKI
                     SQKKEKNLTLLTFSDLTYSKDELKELNSQLVDKISISSKNNNTYIMLQNKQNINLELS
                     SINDKFGVRIRAIEQGKANIESVPTTTVNNSQELMPKPKSTSLEGYDYTNYILVMLIL
                     VILLIVLWWFKKTMVYKNNNVSRDFTMIFQRFLDKNNQLVIFDHANKRYTMIIGNSNV
                     LLESVEIPEEQTIKHTEKTEKNFDSFFEENKKRIQNLIEQRQKGKKS"
     gene            complement(4303..4611)
                     /gene="fliN"
                     /locus_tag="RJ318_001530"
     CDS             complement(4303..4611)
                     /gene="fliN"
                     /locus_tag="RJ318_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HDV7431372.1"
                     /translation="MSDDIEFNIHHGLLQSYEDILDITVDFVSELGTTNMSVAELLKL
                     EVGSVIDLEKPAGESVELYINKRIFGKGEVMVYEKNLAIRINEILDSKTVLQYFKKEI
                     "
     gene            complement(4611..>5016)
                     /locus_tag="RJ318_001531"
     CDS             complement(4611..>5016)
                     /locus_tag="RJ318_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HDV7431373.1"
                     /translation="YSITHFCEHILRLRIEAAQDISGELYGASIPIMGKSEGECNFYL
                     FFPKEFLKKIAEILINDEKFKEDDWCDLTKECANQIIGYAKNLLNDAKGDDEYKLGIP
                     EYLGKVDFSEIVLDEALTYKFENCYFRIGYCK"
BASE COUNT         1831 a          741 c          688 g         1756 t
ORIGIN      
        1 aaattttaag atgatttgaa aaggatatta tggaaaattt aataatttac gcttttatat
       61 atcttttagg ttcaatccct tttgggctaa tcctagctaa attttttgct aaaactgata
      121 tcaaaaaaga aggttcaaaa agtatagggg caaccaatgt tttaagagta gtaaaagaaa
      181 aaaatcccaa actagcaaaa aaacttgcca ttgctacaat aattttagat tttgcaaaag
      241 cagctattcc tttattaacc ttgaaatttc ttcattatga tcaagctttg ctttggagcg
      301 tggcagtttt ggctattttg ggacactgtt tttcaattta cttgttattt gaaggaggga
      361 aaggcatagc aacaggagca ggcgctatga tagttttgct tccattggaa gtgcttacag
      421 catttattgt gtgggtagtt attggaaaaa tttttaaaat atcttcgcta gcttctttag
      481 cagcgttact tgcttttgtt ataagttctt ttatatttaa ttatgactta gaaattcata
      541 cacatgcacc cgttttcatt atcgctttta ttatagtata taaacatcta cctaatatta
      601 aaagattgat ttttaaagaa gaatgcaaag tcatataaaa ataaaatttc actttaagtg
      661 tatcattggt atattagatt tcgaaagaag gaaaaaacaa aaaattatta tcaagcttaa
      721 agctaaagca aatgaatttt taaattatgc agaagtaatt accaaaatta aaacatggta
      781 taaaaaagaa gaattttaca cccttgaaga gtctttagac tttgtaagct taaatttaaa
      841 aaaagatttt cctaatttaa ccaatcttaa cataaaaatt ttcaaacccc atataataaa
      901 aaatgctaca gttggggtta aattgaaaaa aaaatattaa ttttttttta aagatatcta
      961 aacatttact taagctatga tataattctt taaatttttc ttaataagga tagaacaaat
     1021 gagaatttta gttatagaag atgagattag cctaaataaa acaattatag acaatcttaa
     1081 tgaatttggt tatcaaactg attcttctga aaattttaaa gatggagaat actttatcgg
     1141 cattagacat tatgatttag ttttagcaaa ctggacttta cctgatggag atggagcgga
     1201 acttgttaac actattaagc ataaatctcc aagaacttca gttatgatta tgtcttcaaa
     1261 aacagacaaa gaaacagaaa tcaaagcttt gaaagctgga gctgatgatt ttgttacaaa
     1321 acctttagat tttgatattc tactcgcaag aattgaagca agactaagac ttggcggaac
     1381 caatgttatt aaaattgaag acttagttat tgatccagat gaggaaaaaa ttacttataa
     1441 agatcaagat atagaactta aaggaaaacc ttttgaagtt ttaacgcact tagcaagaca
     1501 ttcggatcaa attgtatcca aagaacaact tttagatgcc atctgggaag aacctgagct
     1561 agtaactcca aatgttatcg aagtagctat caatcaaatt cgtcaaaaaa tggataaacc
     1621 attaaatata tctaccatag aaacagttcg tcgtagagga taccgtttct gcttccctaa
     1681 aaaatcttaa caattttgca ccttcggtgc aaaaaattta tctttatttc tatttttata
     1741 ttttatttaa gtttggttat tgtataaact aaaattattt tttaaatttt tgaaaggtta
     1801 tgatgtctct tttaattaca aaagactgcg tatgttgtga tgcttgcaga gaagaatgtc
     1861 ctgatgaagc tatttatgaa aatagtccaa tttatgtaat agaccctgat ctttgttcag
     1921 agtgcgttaa tgatttttca gagcctgcct gtattgttgc ttgcccatat gaatgtatca
     1981 ttcctgatcc tgataatgta gaaactatag aagaattaaa actcaaacat agagatagag
     2041 aattttaatg gcaaaaaaaa cagccgttgt tgatcttggc tcaaactcca ttagaatggt
     2101 gatttttgaa aaaacttcta gatatggttt ttatacaact tgcgaataca aacgcaaagt
     2161 aagacttgga gaaaatgctt ataataatgg caaaattctc caagaagaag ccatgcaaag
     2221 agccgaagat gccttagctt ttttcaaaca atgcgcttta aagcataagt gcaaaaaaat
     2281 atttatagta ggcacatcag ccttaagaga tgccccaaat tcaaaaaatt tcattaaaag
     2341 aatcaaagat aatctgtctt taaatatacg ctgtatagat ggaaaaagcg aaagttactt
     2401 aggtggtctt gcggctctaa atttattaag tccttttaag gatggaacca ctttagacat
     2461 aggtggtggt tctagtgaat tgtgtttaat aaaaaataat agaattattt cttgcatatc
     2521 tcttgatatt ggcactgtta ggctaaaaga attgttctat gatactggaa aaatggattc
     2581 tttagaagaa tttataaaac caattttaga acaaattcct aaagaatttt acaatcaaaa
     2641 ccttattgca ataggtggaa gcttaagagc aatatctaat tccatcatgc aaaaaaattc
     2701 ctatccactg aaaaatttac atgattttcg ctatatgcta gatgaagaaa aaggacatat
     2761 tttaaaaatt tttaattcaa acttagactc tttaatcaat tttggcataa aaaaggatcg
     2821 ttttgatacc attaaagagg gtatatttat ttttttaaag attgcggaaa aaataaaagc
     2881 caaacaagtt atcacgagtg gggttggaat cagagaagga gtttatttgc aagatttact
     2941 tcgtcctaaa atcacatttc caccaaattt caatcccagt ttaaaatgtt tgcaagataa
     3001 atttttacaa tcaaaacaaa aaaataaaac tccacatttt gctctgcaaa tttttacaac
     3061 ccttaaaaat cttcataaac ttaacgataa ctataagcat actttactaa atgctgccaa
     3121 attatgccat attggagaat atttaaattt ctattttgct aatgaacact ctgctcattt
     3181 tgtactaggt ggattaaatt atggattttc gcataaagaa aaagctttaa ttgctagtat
     3241 tattaagctt aatggaaaaa aagttaatcc ttataatctt gaaccctata aacaactttt
     3301 acccaatatt cataccattt catggcttaa ttttattttg tgcttagcta aaactttaag
     3361 cacaaatgaa gataagattg attttgcttt tgcaaacaat actctttata tatatcaaga
     3421 aaacaaaatt cttaatttac ccaaagatga gctcaaaaaa attgcaaaac cagctaccat
     3481 agcattagca atcaatcaaa aaatttaaga ttttttacct ttttgacgct gctctataag
     3541 attttgaatt ctttttttat tctcttcaaa aaaagaatca aaatttttct ctgttttttc
     3601 tgtatgtttt attgtttgtt cctctggaat ttcaacactt tctaaaagta cattggaatt
     3661 acctattatc attgtataac gtttattagc gtgatcaaaa ataacaagtt gattattttt
     3721 atctaaaaat ctttggaaaa tcatagtaaa atctctagaa acattgttat ttttataaac
     3781 catagtcttt ttaaaccacc aaagcactat taacaaaata actaaaatta gcattactaa
     3841 gatataattt gtataatcat acccttctaa acttgtactt tttggtttag gcattaattc
     3901 ttgagaatta ttcacagtag ttgtaggtac agattcgata tttgcttttc cttgctctat
     3961 agctcgtatc cttactccaa atttatcatt gatagagcta agttctaaat taatattttg
     4021 tttgttttgt agcataatat aggtattatt atttttagaa ctaatactaa ttttatctac
     4081 aagttgagag ttaagttctt ttaattcatc tttagaatac gttaaatcac taaaagttaa
     4141 aagagttaaa tttttttctt ttttttgaga aatcttgcca ttataggcat tatcaaaaga
     4201 aagcattaaa tctactcgat catttctatc gtagatatta aaactaatca gctcaacact
     4261 atataaaggt aaaattaaaa aaaataatac tagcaatctc atttaaattt cttttttaaa
     4321 gtattgaagc acagtcttag aatccaaaat ttcattaatt cttatagcga gatttttttc
     4381 ataaaccata acctcgcctt tgccaaaaat tcttttattg atataaagct caacgctttc
     4441 tccagcaggc ttttcaagat caataaccga acctacttca agttttaaaa gctccgctac
     4501 actcatattt gtagttccaa gctcgcttac aaaatctact gtaatatcta agatatcttc
     4561 ataagattgt aaaagcccat gatgaatgtt aaactctata tcatcgctca ttatttgcaa
     4621 tatcctattc taaaataaca attttcaaat ttataagtta aagcttcatc tagaactatt
     4681 tcagaaaaat caacttttcc taaatattcc ggaattccga gtttatactc gtcatcaccc
     4741 ttggcatcat ttaacaaatt tttagcataa cctataatct gattggcaca ttctttagtt
     4801 aaatcgcacc agtcatcttc tttaaatttt tcatcattaa ttaaaatttc tgcaattttt
     4861 tttaaaaatt cttttggaaa aaataaataa aaattacatt ctccttcgct tttgcccatg
     4921 ataggaatac tcgctccata aagttcaccg cttatatctt gagctgcttc aatgcgaagt
     4981 cttaagatat gctcgcaaaa atgagtgatg gaatac
//
LOCUS       DAPIYB010000096         4820 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.097, whole genome shotgun sequence.
ACCESSION   DAPIYB010000096 DAPIYB010000000
VERSION     DAPIYB010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4820
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.097"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..753)
                     /gene="map"
                     /locus_tag="RJ318_001532"
     CDS             complement(<1..753)
                     /gene="map"
                     /locus_tag="RJ318_001532"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDV7431374.1"
                     /translation="MIELKKPDEIEKLRIANQIVAKTLNFLENEIKIGMSLKQIDKMA
                     EDYILSLGAKPSFKGLYGFPGAICTSLNQVCIHGIPDDKIIKEGDILGLDVGSLIDGY
                     YGDAARTIAIGEVSPADKALISCAKDALYHAIDIIRDGMRFKELSAALGEFIHVRGFV
                     PLRGYCGHGIGRKPHGEPEILNYLEKGASAKSGPKIKNGMVFCIEPMICQKDGTPKHY
                     NGKWDAGSIDGLNAAHYEHCVAVINGRAEILSM"
     gene            complement(755..1507)
                     /locus_tag="RJ318_001533"
     CDS             complement(755..1507)
                     /locus_tag="RJ318_001533"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDV7431375.1"
                     /translation="MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDK
                     DTIIKFCLEALDFFEQFQIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIK
                     ALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQ
                     SAMEYYFKNITTPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENID
                     LKNHKAKLHFYASSDVESLKNTAKIWLNLLRK"
     gene            complement(1509..1967)
                     /locus_tag="RJ318_001534"
     CDS             complement(1509..1967)
                     /locus_tag="RJ318_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDV7431376.1"
                     /translation="MRHIFFIITIIFFISGCSFYQNLNYRPSYNTNKEARLKVIANEW
                     KKTPYVLGGTSKKGADCSGFTQSALAQLNIRIPRTTKTQLGSGRKVSKSKLQTGDLVF
                     FKTGRGPNGMHVGIYMSKGKFIHLSTKDGVKEVELNSSYWKARYIGARRY"
     gene            complement(1976..3145)
                     /gene="nhaA"
                     /locus_tag="RJ318_001535"
     CDS             complement(1976..3145)
                     /gene="nhaA"
                     /locus_tag="RJ318_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDV7431377.1"
                     /translation="MNNIVHKLKTLVLNEAFGGVLLIVCTLLALLVQNGSFSEHYREF
                     LNLKVGFSVGEFELNKPFLLWINDGLISIFFFAIGLELKKEFLHGDFKNPKNIVLPFM
                     AALGGILIPAMLFALVNIGDAYTLKGWAIPTATDTAFALAILMMCGKHIPSSLKIFLL
                     SLAIFDDVGAILIIAIFYTTKLSIAAFVIAGLAILVMLILNLLGITRKSFYFICSVIL
                     WISVLKSGVHATLAGIVTAFFIPMQTKNGEAFLEEIYESLKFWIAFIILPLFAFANAG
                     VNLSNIDIGAIFSGVSIGIFLGLFVGKQVGVFLFSYLAIRFKFAALPQGSNLKQLYGV
                     CILTGIGFTMSLFIDGLAYEVSDIFNYADNLAILIASFCSGIWGFIYLKFFTTRS"
     gene            complement(3142..4290)
                     /gene="nhaA"
                     /locus_tag="RJ318_001536"
     CDS             complement(3142..4290)
                     /gene="nhaA"
                     /locus_tag="RJ318_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDV7431378.1"
                     /translation="MQMIKKMVLSETFPGILLIFFTFLALLCKNSSLSVIYTDFFHAN
                     FTVGFDHFQISKSLDLWINDGLIAIFFLCIGLELKYEILRGQLKNIRAVSLPIFGALG
                     GMITPALIFIAINYSHDFAMKGWAIPTATDIAFAVGILMLLGNKIPTSLKLFLLSLAI
                     FDDLGAIVIIALFYTDQLSALAIIICLFCIFALLLLNYYHITHLSLYVLVGVVLWIAM
                     LKSGVHATLAGVIISLFIPLDTKNKKPYLHEVLKDLNPWVVYFILPLFAFANAGIDIR
                     DMHLGSVFSPVSLGIILGLFLGKQLGVFTFCFIAIKLKLAKLPENIKYGKFYGICILT
                     GIGFTMSLFIDGLAYKNSDIFEYADKLAILVASFLSAIVGFIYLKIVK"
     gene            complement(4433..4615)
                     /locus_tag="RJ318_001537"
     CDS             complement(4433..4615)
                     /locus_tag="RJ318_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfB family protein"
                     /protein_id="HDV7431379.1"
                     /translation="MVSDVSMGNVNLMTAVNTSVLKKSMDTNEALMNELIEGMEGVSQ
                     ASAPQASSSSGLDIYA"
BASE COUNT         1819 a          911 c          589 g         1501 t
ORIGIN      
        1 catagaaaga atttcagcac gcccattaat cacggcaaca caatgttcat aatgagccgc
       61 attcagccca tcaatacttc cagcatccca ttttccatta taatgctttg gtgttccatc
      121 tttttggcat atcataggct ctatgcaaaa caccattcca tttttaattt tagggccact
      181 ttttgcactc gcaccttttt ctaaatagtt taaaatttca ggctctccat ggggctttcg
      241 tcctatacca tgcccgcaat atccacgaag cgggacaaaa cctcttacat ggataaattc
      301 gcctaaagca gctgaaagtt ccttaaaacg cattccatca cgaataatat ctatagcatg
      361 atataacgcg tctttagcac aagagattaa agctttatca gcgggtgaaa cttctcctat
      421 agcaatagtt cttgctgcat ccccataata cccatcaatc aaacttccca catcaagacc
      481 taaaatatca ccctctttga taattttatc atctggaatt ccatggatac aaacttgatt
      541 taaagatgtg caaatggcac ctggaaaacc ataaagtccc ttaaatgatg gcttggcgcc
      601 aaggcttaaa atataatctt ctgccatttt atcgatttgt tttaagctca ttcctatttt
      661 aatttcattc tctaaaaaat ttaaagtttt tgctacaatt tgatttgcta ttcttaattt
      721 ttctatttca tctggttttt tcaattctat cattttattt ccttaataaa tttagccaaa
      781 ttttagcagt attttttaaa gattcaacat cgcttgaagc ataaaaatgt aattttgctt
      841 tatgattttt caaatctata ttttctcttt ctttaagaaa ttcaactata gcatctcctg
      901 aatgaattaa ttttgtttta tcgccaaaat acttacttaa agaacgtcct agtaaaggga
      961 aatgagtgca agcgagtatc aaagcatctg gagttgtgat atttttaaaa taatattcca
     1021 tagcactttg caaaaaatct ccttcaaaaa taccttcttc aaccataggc acaaaaagcc
     1081 ctgtagctaa agcatttata tttgtatatc cttgagataa caaacgcttt tgatattctt
     1141 ctgatttaat ggttgctttt gtcgcaatga ctaaaatttc tttattttta tcatgcaaag
     1201 cttttatcgt tgcttcaacc cctgcatcaa ttacgccata tactggaaaa tgtgcttttg
     1261 ctcttaaagc atctaaagca taagcactag cagtattaca tgcaatgata agcatatcaa
     1321 tttgaaattg ttcaaaaaaa tccaatgctt caagacagaa ctttataata gtatctttat
     1381 ctttcactcc ataaggaact cttgcggtat ctccataata gataatttca tcaaaaagcc
     1441 tagcttcata gagagatttt aaaacactaa gccctcctac tccgctatca aatacaccta
     1501 ttttcacttt aataccttct tgctcctata taacgagcct tccaataaga actatttagc
     1561 tcgacttctt ttactccatc tttagtagat aaatgtataa attttccctt gctcatataa
     1621 ataccaacat gcataccatt tggccctcta cctgtcttaa aaaataccaa atctcctgtt
     1681 tgcaattttg atttagaaac ttttcttcca gaacctaatt gagtttttgt agtgcgaggt
     1741 atgcgtatat taagctgagc taatgcgctc tgtgtaaatc ctgaacaatc agcacctttt
     1801 ttactagttc cacctaaaac ataaggggtt tttttccatt catttgcaat aaccttgagc
     1861 cttgcttctt tatttgtgtt gtaactagga cgatagttta gattctgata aaaactacat
     1921 ccacttataa aaaatataat cgtgatgatg aaaaaaatat gcctcatcaa tccccttaag
     1981 atcgagtagt aaagaattta agataaataa aaccccaaat cccagaacaa aatgaggcta
     2041 tgagaatagc taagttatct gcataattaa aaatatcact aacttcatac gccaatccat
     2101 caataaacaa actcattgta aaaccaattc ctgtaagtat gcaaacccca taaagttgtt
     2161 tcaaatttga accttggggc aaagctgcaa atttaaagcg gattgccaaa taagaaaata
     2221 aaaatacacc cacttgttta cccacaaaaa gccctaagaa aatacctata cttacacctg
     2281 aaaaaattgc tcctatatcg atattggata aatttactcc agcgttagca aaagcaaata
     2341 aaggtaaaat aataaaagca atccaaaatt ttaagctttc ataaatttct tctaaaaatg
     2401 cttccccatt tttagtttgc atcggtataa aaaatgctgt tacaattcca gctaaagttg
     2461 catgtactcc actttttaaa acactaatcc aaagaataac tgagcaaata aaataaaaag
     2521 actttcttgt tatccctaaa agatttaaaa taagcattac caaaatagca agtcctgcaa
     2581 ttacaaaagc agctattgat aattttgtcg tataaaaaat agctataatt aaaatagcac
     2641 ccacatcatc aaaaatagcc aaagaaagta agaaaatttt taaacttgat ggaatgtgct
     2701 tgccgcacat cattaaaatc gctaaggcaa acgctgtatc tgtagctgta ggtattgccc
     2761 aaccttttaa agtataagca tctcctatat tcaccaaagc aaacaacatt gctggtataa
     2821 gtataccccc taacgcagcc ataaaaggca aaacaatatt tttaggattt ttaaaatctc
     2881 cgtgcaaaaa ttccttctta agctcaagcc ctatagcaaa gaaaaatata gatataagcc
     2941 catcatttat ccaaagtaaa aaaggcttgt taagctcaaa ttcacctaca ctaaatccga
     3001 cttttaaatt tagaaattct cgataatgtt cgctaaaaga cccgttttgc acaagcaaag
     3061 caagcaaagt gcaaactata agtaaaacgc cgccaaaagc ctcatttaaa actaaagttt
     3121 ttaatttatg tactatatta ttcatttaac aatcttaaga taaataaaac caacaatggc
     3181 acttaaaaaa ctagctacta aaatagcaag tttatccgca tattcaaaaa tatcactatt
     3241 tttataagcc aaaccatcaa taaacaagct catcgtaaaa ccgatgcctg ttaaaataca
     3301 tataccataa aattttccat atttaatatt ttcaggtaat tttgcaagtt taagtttgat
     3361 agcaataaaa caaaaagtga aaacacctaa ttgttttcct aaaaatagtc ctaaaataat
     3421 cccaagactt acaggagaaa atactgaacc aagatgcata tctctaatat caattccagc
     3481 attggcaaaa gcaaataaag gtaaaataaa ataaactacc caaggattta aatccttaag
     3541 aacttcatgt aaataaggtt ttttattttt tgtatcaaga ggtataaaca aagaaatgat
     3601 cacaccagcc aaagttgcat gcactccact tttaagcata gctatccaca acacaacacc
     3661 taccaacacg tacaaagaaa gatgggtgat gtgataataa tttaacaaaa gcagagcaaa
     3721 tatacaaaac aaacaaataa taattgctaa agctgaaagc tgatctgtat aaaacaaagc
     3781 aataataaca atagcaccca aatcatcaaa aatagctaaa gagagtaaaa aaagttttaa
     3841 acttgtagga attttatttc ccaaaagcat taaaataccc actgcaaaag ctatatcagt
     3901 tgctgtaggt attgcccaac ctttcatagc aaaatcatga gaataattaa tagcaataaa
     3961 aattaaagcc ggagtaatca taccccctaa agctccaaat ataggtaaag atacagctct
     4021 tatattttta agttgcccac gtaaaatttc atattttaac tcaagcccta tacatagaaa
     4081 aaatatagct atcaaaccat catttatcca taaatccaac gattttgaaa tttgaaaatg
     4141 atcaaatcct actgtaaaat tagcatgaaa aaaatctgta taaataacac ttaaagaaga
     4201 atttttacat aataaagcta aaaatgtaaa aaatataagc aaaataccag ggaaagtttc
     4261 acttaaaacc atcttcttta tcatttgcat ccttgctcct aagtaaatat ttgtaaaaat
     4321 ttaatacgat aaataaaatg gtaaaattat aacgaaaaaa tactaaagaa ataattattt
     4381 aaaaaaacaa gcccaagata ccaaaaagtt cttaagcttg ttcttaagat atttaagcgt
     4441 aaatatccaa accactagag ctagaagctt gtggagcgga ggcttgagag acaccttcca
     4501 taccttcgat gagttcattc atcaatgcct cgtttgtgtc catagatttt ttcaaaactg
     4561 aagtattaac agcagtcatt aaattaacat tacccataga aacatctgaa accatacatc
     4621 ctccttttag attgagtctt aagactttat ttaaatcgga tgatattttt aaaacttaat
     4681 attttttact aaacttttta aaatttttca agggaaccaa tatctgaaat taaaaatcat
     4741 aaatttttta agataaaatc ctattttaaa aatttttaca ctatgaaaca ataagcaaaa
     4801 tataaatgat tgatgctttt
//
LOCUS       DAPIYB010000097         4703 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.098, whole genome shotgun sequence.
ACCESSION   DAPIYB010000097 DAPIYB010000000
VERSION     DAPIYB010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4703
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.098"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            280..1266
                     /locus_tag="RJ318_001538"
                     /pseudo
     CDS             280..1266
                     /locus_tag="RJ318_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002881065.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
     gene            complement(1301..1942)
                     /locus_tag="RJ318_001539"
     CDS             complement(1301..1942)
                     /locus_tag="RJ318_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HDV7431380.1"
                     /translation="MRNFFCKFVLALVFYSSFALANNSFITLNPSLPSSENSVIEAFS
                     YKCIHCYNHHKFGTLEKLREAFPNLHFKLYPVSLMNGEFSKEMNELFTFAQYKDEQNG
                     KDASYSDSLSHKLADVYFVSYFLNKQRNFSNLDEFYDIGLKAMNVNKNEVLNFLNTPK
                     AKEILSEFQRANDIAKTYGTPAFVVNGKYQINPSAINSMQDLEDLVKKLSNMK"
     gene            complement(2026..2196)
                     /locus_tag="RJ318_001540"
     CDS             complement(2026..2196)
                     /locus_tag="RJ318_001540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431381.1"
                     /translation="MAFNLSKGVSLGEPKPKIDEFNWGAKEPSVQIQFSGSGTDYQAM
                     PFSVDQAFNPKK"
     gene            complement(2291..2656)
                     /locus_tag="RJ318_001541"
     CDS             complement(2291..2656)
                     /locus_tag="RJ318_001541"
                     /inference="COORDINATES: protein motif:HMM:NF017722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HDV7431382.1"
                     /translation="MLWTICKKWALFLQQILCVQDSKHVRTVCDTIIEVDENGNVVDD
                     WRLYKILDPYRSTIIKTLDQSAVCLNIDASKVGKTLSDEELAKMDESDKFGDIAGIGR
                     NWAHIKGGIKNFKNIYCNL"
     gene            complement(2667..2819)
                     /locus_tag="RJ318_001542"
     CDS             complement(2667..2819)
                     /locus_tag="RJ318_001542"
                     /inference="COORDINATES: protein motif:HMM:NF017722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431383.1"
                     /translation="MNWGNIYNRGIMISFRQNKDGALTWGFGQRYVKYDVWEEKFSIA
                     NYLLSI"
     gene            complement(3226..3333)
                     /locus_tag="RJ318_001543"
     CDS             complement(3226..3333)
                     /locus_tag="RJ318_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfate sulfotransferase"
                     /protein_id="HDV7431384.1"
                     /translation="MIKMNPYGLSPLTAIIMNNGYVLSDIKKSNGQTIS"
     gene            complement(3498..4298)
                     /gene="dsbI"
                     /locus_tag="RJ318_001544"
     CDS             complement(3498..4298)
                     /gene="dsbI"
                     /locus_tag="RJ318_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide oxidoreductase DsbI"
                     /protein_id="HDV7431385.1"
                     /translation="MSCIKMKDKCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQ
                     EYLFMKPCEQCVYIRFDMLVMAIGGMIALINPANNIIKIFSYSLAFYGIWLGLEHCLT
                     LNHIHEVVHSENPFAGVDGCREIPIYPFNLPLYKWASSWFLPTGECGMDTPVVPENAY
                     NHLNAFQKFFIGTPPDFENGLYSNGWYLIPSLKFMNMAICCLIAFLCCFVVLFAMFIA
                     YVLDKNKPNAKIFALVIVALVLVLKFIGESKNPNQNIASLNQVVLRYS"
     gene            complement(4526..4654)
                     /locus_tag="RJ318_001545"
                     /pseudo
     CDS             complement(4526..4654)
                     /locus_tag="RJ318_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002908624.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide isomerase"
BASE COUNT         1640 a          791 c          673 g         1599 t
ORIGIN      
        1 atcttgcctt ccaagatttt gaaaaacgca gttgtctaag tctttttttt cttgaatgct
       61 taaatttttc attaacctaa cctttaaaaa tattgcaaga ttttattata gcgaaaaaac
      121 tttatttttg ctttaaatat ataagttcta ttttaaatat aaacgaatat tattttaagg
      181 tttaaagctt ttttcttaaa atgtaattag gttttattga ctttttctaa ataaagtctt
      241 atactgaatt taaattacgc aaaataagga gggaaattga tgaataaatt ttctatagtt
      301 ttaactttgt tgttatgtgg aagttgtgct ttagccttag atccaaattt ggaaaaaact
      361 aagagtgcaa caggtattga tctgcctact gccaaatgga atttacctaa ggaattaaat
      421 gaagatggca ctatagatga aactaaaatg ccaaaaaatt cagaatatag caaaatggtt
      481 attttgggaa ataaaattct taatgaaaca agcaaatatg tgggtccaca agccaaagat
      541 cctaaaaaaa agatttgcgg gaaataatct ttcttgttca agctgtcatg ctaatggtgg
      601 aagtgtgcaa aatcaatcgg gttttgtagg aatttgggca agatttccac aatataatgc
      661 aagaggagat aaagtaatta ccttagcaga taggatcaat ggctgttttg aacgctctac
      721 gaatggcaaa agaatgccta gtgatacacc tgaaatgaaa gccatgctaa cttatatgca
      781 atggttatct caaggagttc cagtaggagc taagatagaa ggacagggac ttaagaagat
      841 agatttcatc ttaaaagcag ctgatcctaa aaaaggtaag gcaatttata tggataaatg
      901 tgccgtttgt catcaagaaa atggattagg gcttaaaaat gaggatagca caggggcgta
      961 ttatctttat ccaccacttt ggggtgatga tagttataat acaggagctg gaatgtatcg
     1021 tctatcaaag ctgcttctta tattaaagaa aatatgcctc aaggtgcgcc tgacttaagt
     1081 cttgaagatg cttatgatgt agcagcttac atgaattcac aagctcgtcc tattaaagca
     1141 aatagaaata aagactttcc agatagaaag attaagcctt tagatatgga tgtaggacct
     1201 tatgatgata gcttttctac aacccaacat cgctatggac cttatacaaa tatgatcaaa
     1261 aaataatttt taaggcaatt tttattgcct taaaaattta ttatttcata ttacttaatt
     1321 ttttaactag atcttctaaa tcttgcatcg aattgattgc gcttgggtta atttgatatt
     1381 ttccattaac aacaaaagca ggggtaccat aggttttagc tatatcatta gctctttgaa
     1441 actcgcttaa aatttcttta gcttttgggg tatttaaaaa atttaatact tcatttttat
     1501 ttacattcat agcctttaaa cctatgtcgt aaaattcatc taaatttgaa aaatttcttt
     1561 gcttgtttaa aaaataagaa acaaaataaa catcagcaag tttatgagat aaactatcag
     1621 aataactcgc atctttacca ttttgctcat ctttgtattg agcaaaggta aaaagctcat
     1681 tcatttcttt ggaaaattcc ccattcatta aacttacagg atagagttta aaatgtaaat
     1741 ttggaaaagc ttctctcagt ttttcaagag ttccaaattt atgatgatta taacaatgta
     1801 tacatttata agaaaatgct tctattacac tattttcaga gctaggtaaa cttggattaa
     1861 gggtaataaa actattgttt gctaatgcaa aacttgaata aaatacaaga gctaaaacaa
     1921 atttgcaaaa aaaattacgc atattatatc cttggttaaa taaaattttc aaagataatt
     1981 ttatttaaaa aaaataaata aacccaaaaa taaatttggg cttatttatt ttttaggatt
     2041 gaatgcttga tcaacactaa aaggcattgc ttgataatcc gtgcctgaac cgctgaattg
     2101 aatttgaacc gaaggctcct tagcgcccca gttaaattca tcaattttag gttttggttc
     2161 tccaagactt acacctttac taagattaaa agccattcca gcgttgcact ataaaccata
     2221 atagaatctt tatctggttc atattgagtt aaagaagtta caggataaaa ccattcattg
     2281 ccatttttat ctacaggttg caataaatat ttttgaaatt ctttattcca ccctttatat
     2341 gcgcccaatt cctacctata cctgctatat ctccaaattt gtcgctttca tccattttgg
     2401 caagctcttc atcgcttaaa gttttaccca ctttacttgc atctatattt aaacacactg
     2461 cactttgatc taaagttttg ataatagtac ttctataagg atctaaaatc ttatacaatc
     2521 tccaatcatc aacaacatta ccattctcat ctacttctat aatagtatca cacactgtgc
     2581 gtacatgctt actatcttgg acgcaaagta tttgttgaag aaataatgcc cattttttgc
     2641 atattgtcca tagcatgaga aaaaatctat atagacagca ggtaatttgc gattgaaaat
     2701 ttctcttccc agacatcgta ttttacatat ctttgaccaa atccccaagt taaagctcca
     2761 tctttgtttt gacgaaaact tatcataatt ccacgattgt aaatattacc ccagttcatt
     2821 agtttattgt tatcataata ccatctgatt tcacccttgg tatcttataa taaagacatt
     2881 tgaattttca tcccattcca tagcaccacc tacaagatta ttccatacag attatgagtc
     2941 tttgccagat tattttccag gagcattatt tactaaatat agcctatctg aaaattttgg
     3001 atccattttt aatactttca cattttcaaa aagagttcct ctttgatcag tgccttccgc
     3061 ttggctctat gctagcccat ggagttgtaa ttttataaat ctcatcaatg actttttgac
     3121 ttttaccatt tgcggtttta gtataactta cctttactat aagaaggata aagtccaaaa
     3181 ataggaattc caccatacgt cttagccatt ttagaattca cattattaag aaatagtttg
     3241 accatttgat ttttttatat cgcttaagac ataaccatta ttcatgataa tagcggtcaa
     3301 aggagacaat ccataaggat tcattttaat catacccatt tgtccttaaa tttgccaatc
     3361 tattttcact ctactaggac cacccatggc cattaaagca ttaggtgcaa gtagggtaga
     3421 acccgccaaa attgccatgc aaagagtttt gctaagtctc atgatcaatc ctttaaaatt
     3481 atttaagaca tcctatttta agagtatctt aaaacgactt gatttaaact agctatattt
     3541 tgattcggat tttttgattc gcctataaat ttaagcacca aaaccaaagc aacaatcacc
     3601 aatgcaaaaa ttttagcatt aggtttattt ttatctaaaa cataggctat aaacattgca
     3661 aaaagcacga caaaacaaca taaaaatgct ataagacagc aaattgccat attcataaac
     3721 tttaaactag gaatcaaata ccaaccatta ctataaagcc cattttcaaa atcaggtgga
     3781 gttcctataa aaaatttttg aaaagcattg agatgattat aagcattttc tggaactaca
     3841 ggggtatcca tcccgcattc tcctgttggc aaaaaccaac tagaagccca tttatacaaa
     3901 ggtaaattaa atggataaat aggaatttca cgacatccat ctacgcctgc aaaaggattt
     3961 tcagaatgaa ccacttcatg gatatgattt aaagttagac aatgctccaa gccaagccaa
     4021 attccataaa aagctaagct ataagaaaaa atttttataa tattatttgc agggttgatt
     4081 aatgcaatca taccacctat agccataaca agcatatcaa atcttatata cacacattgt
     4141 tcacaaggtt tcataaaaag atattcttga aataaaaaat gtgctataca agtaagtcct
     4201 atagtaacta taatcaaaat caaccaaggt ttgcgcgtat cttgccattt ggaaagtgaa
     4261 aaatttctgc atttatcttt catttttata caactcattt ttgcttgcta agttctttag
     4321 taatttcaat caaagcctct ggagagttga ttgcacttgg aacgatttga tattttccat
     4381 taacaacaaa agcaggggtg ccataatttt gcgaaatagg attggcaatt tcataacttt
     4441 ttaaaagctc tgcagcctct ggagttttta agaaattttc aaaatcagct ttacttacat
     4501 tcattgcttt taaaccgaca ctataattat cagcgttagc aatatgattt ttaagaatta
     4561 catattcttt accttcgctt aatgcgctaa cacttatacc tgctaaaaaa gcacatacaa
     4621 caatagatct tgctaatttt actggaaatt tcattaccct ctccttgaaa tttggttttg
     4681 ataaaacttt ttattaagtt ttt
//
LOCUS       DAPIYB010000098         4300 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.099, whole genome shotgun sequence.
ACCESSION   DAPIYB010000098 DAPIYB010000000
VERSION     DAPIYB010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4300)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4300)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4300
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.099"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..110
                     /locus_tag="RJ318_001546"
     CDS             <1..110
                     /locus_tag="RJ318_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HDV7431386.1"
                     /translation="CETHEYMFDDSEKKIGELKQLINKCNIQNILLDWI"
     gene            130..1149
                     /gene="hddA"
                     /locus_tag="RJ318_001547"
     CDS             130..1149
                     /gene="hddA"
                     /locus_tag="RJ318_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-D-manno-heptose 7-phosphate kinase"
                     /protein_id="HDV7431387.1"
                     /translation="MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCT
                     LIKREDGKIIFDSPDTNSYCEYESKEFLGNDGKLDIFKSIYNRIVKDFTKKPLSFSLH
                     TYSDVPSGSGLGGSSTLVVGVIKAFAEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQD
                     QYAATFGGFNFMEFYNNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEEHKK
                     GKLGDEKSLEAMHAIKQDAIKMKEALFRADFGTLAQILGKSWRSKKIISEIVSNDELE
                     RIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALRKEQGYVQDFSFTKEGV
                     KSWRI"
     gene            1137..1742
                     /gene="gmhA2"
                     /locus_tag="RJ318_001548"
     CDS             1137..1742
                     /gene="gmhA2"
                     /locus_tag="RJ318_001548"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDV7431388.1"
                     /translation="MENLNSYIKGHFADSILVKEQILKDENLITLIKNASLEVIKAYK
                     NGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYEN
                     LFARQVQAQGVKGDVFIGISTSGNSKNILKALEFCKQKEIISIGLSGASGGAMNELCD
                     YCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFSCKQ"
     gene            1730..2395
                     /gene="hddC"
                     /locus_tag="RJ318_001549"
     CDS             1730..2395
                     /gene="hddC"
                     /locus_tag="RJ318_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-D-manno-heptose 1-phosphate
                     guanosyltransferase"
                     /protein_id="HDV7431389.1"
                     /translation="MQAIILCGGLGTRLKSIIKDIPKPMAPINDKPFLEFIFEYLKKQ
                     GIKEVILAVSYKYEVIKEYFKDEFLGIKIKYSIEKEPLGTGGAIKETLKFVKNEAYVL
                     NGDTFFDIDLSKLKLNESKICLALKQMNDFDRYGTVNVDEQDLVISFEEKVFKKQGLI
                     NGGIYLLTKDIFNDFALQEKFSFEEFLQENYKKLKARACIFDDYFIDIGVPEDYYHFL
                     INN"
     gene            2446..4300
                     /locus_tag="RJ318_001550"
                     /pseudo
     CDS             2446..4300
                     /locus_tag="RJ318_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344805.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
BASE COUNT         1661 a          475 c          731 g         1433 t
ORIGIN      
        1 cttgtgaaac acatgaatat atgtttgatg attcagagaa aaagataggg gagttaaagc
       61 aattgattaa taaatgtaat attcaaaata ttttacttga ttggatatga taaataaatt
      121 aggagattta tgaaaaccat acgcacacaa actcctcttc gtctcggtct agcaggtggt
      181 gggactgata taaatttata ttgtgataaa tatacaggtt atgttttaaa tgcgactata
      241 tctttataca tacattgtac tttgatcaaa agagaagatg gaaaaatcat ttttgattct
      301 cctgatacaa attcttactg tgagtacgaa agtaaagaat tcttaggaaa tgatggaaaa
      361 ttagatattt ttaaaagtat ttataatcgc attgtaaaag attttacaaa aaaacctttg
      421 agtttttctt tgcataccta ttcggatgta ccaagtggta gtggcttggg cggaagctca
      481 actttggttg taggggttat aaaagccttt gcagaatggc ttaatctacc tttaggagaa
      541 tatgaaatcg ctaaacttgc ttacgagata gaaagagaag atttaggcat agtaggtgga
      601 gcacaagatc aatacgccgc aacttttggt ggttttaatt ttatggaatt ttataacaat
      661 aaaagagtca ttgttaatcc tttgcgtatt aaaaactgga tagctagtga gcttgaagct
      721 agaactgtgc tttattttac aaatatcaca agagaagcaa aagatataga agagcataaa
      781 aaaggaaagc ttggagatga aaaatcttta gaagccatgc acgcgataaa acaagatgct
      841 ataaagatga aagaagcttt atttagagcc gattttggta ctttggcgca aattttagga
      901 aaatcttggc ggtcaaaaaa aatcatttca gaaatcgtta gtaatgatga gcttgaaaga
      961 atttataaac ttgctataga taacggagcc tatagtggca aaaccagcgg agcaggagct
     1021 ggtggattta tgtttttctt cgtagatcct actaaaaaat acaacttaat caaagcttta
     1081 agaaaagagc aaggttatgt gcaagatttt tcatttacaa aagagggggt taaatcatgg
     1141 agaatttaaa ttcctatata aaaggacatt ttgcagattc tattttagta aaagaacaaa
     1201 ttttaaaaga tgagaatttg ataactctta ttaaaaatgc ttcattagaa gtcataaaag
     1261 cttataaaaa tggtaacaaa actttattag caggaaatgg tggcagtgct gcagatgcac
     1321 agcatattgc aggggaattt gtaagtaggt tttattttga tagacccggt atcgcaagta
     1381 ttgcacttac tacagatact agcatattaa cagctattgg taatgactat ggttatgaaa
     1441 atttgtttgc tagacaagtg caagctcaag gtgttaaggg agatgttttt ataggcattt
     1501 caacaagtgg aaatagtaaa aatatcttaa aagctttaga gttttgcaaa caaaaagaaa
     1561 tcataagtat aggcttaagt ggagctagtg gcggggctat gaatgaactt tgtgattatt
     1621 gtataaaagt gccttcaact tgcacgccaa gaattcaaga agcgcatatt ttaataggac
     1681 atattatttg tgctattgtc gaagaagagc tttttggtaa aggtttttct tgcaagcaat
     1741 aatactttgt ggcggcttag gaacaagact taaaagtatt ataaaagaca ttccaaagcc
     1801 tatggcaccg ataaatgata agcctttttt agaatttatt tttgagtatc ttaaaaagca
     1861 aggtataaaa gaagtaattt tagcagtatc atacaaatat gaagtgataa aagagtattt
     1921 taaagatgag tttttaggta taaaaataaa atacagcatc gaaaaagagc ctctaggaac
     1981 aggcggagcc ataaaagaga ctttgaaatt tgtaaaaaat gaagcttatg ttttaaatgg
     2041 tgatactttt tttgacatag atttaagtaa attaaagcta aatgaaagta aaatttgtct
     2101 tgctttaaaa caaatgaatg attttgatag atacggcaca gtaaatgttg atgaacaaga
     2161 tcttgtaatt tcttttgagg aaaaggtatt taaaaagcaa ggtttaatca atggtggaat
     2221 ttatctttta actaaagata tttttaatga ttttgctttg caggaaaaat tttcttttga
     2281 agagttttta caagaaaatt ataaaaaact aaaggctagg gcttgtattt ttgatgatta
     2341 ttttatagat attggtgtgc ctgaggatta ttatcatttt ctaatcaata attgaatata
     2401 attatttctt gtttttttga ttgatttatt ttaaaggaaa aacccatgct caacccaaat
     2461 tcagccatag aaagagtaaa aaaccattta gcttataaac taggtcaaac tgtgatagaa
     2521 catagacata acgggggggg tatatagcat tatttaaaaa actctataaa atcaaaaaac
     2581 aacataaaaa agaacaaaaa atttatcaac aaatcataca agtctttccc caacttaaat
     2641 acccaagttt agaaacatgt tctgattata atgaagcttt aagatgtaaa ttccatttat
     2701 cttacatgat aggtgaagtt ttaattaagg cttatcagaa ttggtataaa ggaggtggat
     2761 ttaaattaaa aaataatatt aaaaaagcaa ataaagaatt tcaaattttt agagaaattc
     2821 taaaagaatt taaagaatta aatggtgaaa ctttaaaagc tattcaagat aataaacaat
     2881 tattcctaaa agaatttcca agaataaaaa atatcttaaa aacacatcaa gattatcaac
     2941 ctatactaga taatatcttt cacaacttta attattttat aaaaaatttc gatcttatag
     3001 aagaatggtt attatcagat gatttcaaag aaaaatataa aaaagaaaac catccttatc
     3061 cttcattact tgatcctaaa aaacttaatg atgaaaatga aaaaatcaat tatcataaca
     3121 tacctgctga acttgcttgg aagatgaatt tgcctttacc actcaattat gagtttgttg
     3181 gatttttttt gcatacaagt ggagaaaaag ctatggagag atttttaaaa gaagttggtg
     3241 ttgtgcttat tggtgcattt ggatatgagg atggtaagcg ttatattagt atttttaatt
     3301 ttttgattag tgaagcttgt gcatgcaatg atttaaaatt tgccataggt atactcgatg
     3361 tgaattgtca aaagtatgat aaattttgtt ttttgttgca aaataaacct gtattgattt
     3421 tgcttagaga tcctattgat tctttgaaat cttttattaa tgttagacat cagaaaaatg
     3481 gatttaatga aattcttaaa atagatatta acaatactga ttttgataaa attaatgata
     3541 gaatagttta tgttcacgaa tcaaatggtt gttttaatcc agatacaaat caaaaatttc
     3601 catctcttga aagtatcaaa gctctttcag atactaatca ttggatgtta atgtataata
     3661 ttagacgaaa taagactata gaatttttta gatttaataa aattatttat attgatatga
     3721 tggatatagt tggagacaag actttattta cattagagaa attatcaaaa atactgaatt
     3781 tttcttcccc agataaaaat aataaaatat tttatcagca attatattca ccattaacag
     3841 tattattacc ttgtattata aaagtaaata ataaggtcaa aatttttgtt tcaaatagat
     3901 tttctgtaaa aaacatacaa attatggaaa attgcataga tatcactgat aagtttaaag
     3961 aaatttttca tgaaaacttg attatttttt gttcaaaaga tcattttgat agtttgataa
     4021 ataatcaaac tctttataat gttgttttag aatatattaa taaattttta atttctttaa
     4081 aaaaaaggat taatgttgaa aaaaataaag aagtgaaagt agacgatgta ttggattatt
     4141 ttaaaaagaa tataagtgta gcaaaatctt ataaggatat tttagatgag gaattggttt
     4201 acatcaagca acatcgtcca gatatagtag cttcttggaa atactaccaa gaatttgaaa
     4261 gaatgtgtaa agagttagat gagaataatc aaaacccatc
//
LOCUS       DAPIYB010000099         4208 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.100, whole genome shotgun sequence.
ACCESSION   DAPIYB010000099 DAPIYB010000000
VERSION     DAPIYB010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4208
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.100"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            155..757
                     /locus_tag="RJ318_001551"
     CDS             155..757
                     /locus_tag="RJ318_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDV7431390.1"
                     /translation="MKRNEHNIVLIKNPNFNALIDTGFLDTIDTLKEKLHIHKTDFKD
                     ITHIILTHAHPDHIGALMSEENLFPKAQILIDKKEYDFWIKSDRQEIKNTLLKLKNIE
                     FIDHSKDLIFQNSGIKAIPAYGHTPGQNAIIIDDKIVFWGDLLHLYDIQIPKPKIAIK
                     FDIDQNEAIQTREKLLKEFKERKLKVIGTHVPFIKPKFLD"
     gene            845..1063
                     /gene="infA"
                     /locus_tag="RJ318_001552"
     CDS             845..1063
                     /gene="infA"
                     /locus_tag="RJ318_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDV7431391.1"
                     /translation="MAKDDVIEIDGTVLEALPNANFKVELDNKHVILCHIAGKMRMHY
                     IRIMPGDKVKVELTPYSLDKGRITFRYK"
     gene            1235..1348
                     /gene="rpmJ"
                     /locus_tag="RJ318_001553"
     CDS             1235..1348
                     /gene="rpmJ"
                     /locus_tag="RJ318_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDV7431392.1"
                     /translation="MKVRPSVKKMCDKCKVVRRKGVVRIICENPKHKQRQG"
     gene            1351..1716
                     /gene="rpsM"
                     /locus_tag="RJ318_001554"
     CDS             1351..1716
                     /gene="rpsM"
                     /locus_tag="RJ318_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDV7431393.1"
                     /translation="MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKR
                     VHELSEDEAAAIRKEIQENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQK
                     TKTNARTRKGKRKTVGAKS"
     gene            1726..2118
                     /gene="rpsK"
                     /locus_tag="RJ318_001555"
     CDS             1726..2118
                     /gene="rpsK"
                     /locus_tag="RJ318_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDV7431394.1"
                     /translation="MAKRKIVKKKVVKKNIAKGIVYISATFNNTMVTVTDEMGNAIAW
                     SSAGGLGFKGSKKSTPYAAQQAVEDALNKAKEHGIKEVGIKVQGPGSGRETAVKSVGA
                     MEGIKVTFLKDITPLAHNGCRPPKRRRV"
     gene            2146..2772
                     /gene="rpsD"
                     /locus_tag="RJ318_001556"
     CDS             2146..2772
                     /gene="rpsD"
                     /locus_tag="RJ318_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDV7431395.1"
                     /translation="MARYRGPVEKLERRFGVSLALKGERRLAGKSALDKRPYAPGQHG
                     ARKGKISEYGLQLREKQKAKFMYGVSEKQFRRLFAEAARREGNTGVLLIQLLEQRLDN
                     IVYRMGFATTRRFARQLVTHGHVLVNGKRVDIPSFRVEAGAKIEIIEKSKNNPQITRA
                     IELTAQTGIVAWVDVEKDKRFGIFTRKPEREEVVIPVEERFIVELYSK"
     gene            2785..3798
                     /locus_tag="RJ318_001557"
     CDS             2785..3798
                     /locus_tag="RJ318_001557"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDV7431396.1"
                     /translation="MRNITTSAYTPTEFTIENISDTVAKISAWPFEIGYGITLAHPLR
                     RLLYTSTIGYAPTAIHIDGVAHEFDSMRGMLEDVALFIINLKKLRFKIKGDSNKEIVE
                     FSFKGSKEIYGKDLNNDQVEVVNKDAYLATINEDAELKFTLIVEKGIGYVPSEEIKEL
                     INDPKFIALDAFFTPVREATYDIEKVLFEDNPDYEKVVLTVTTDGQITPNEAFQNALE
                     AMYKQLSVFDKITNVRSVIKNQATSNELENTKLLQNITDLNLSARSYNCLEKAGVVYI
                     GELALMSVSELAGLKNLGKKSLDEIKNIMESIGFPVGTSKLSDNKEILKNKIAELKAQ
                     NEG"
     gene            3802..4155
                     /gene="rplQ"
                     /locus_tag="RJ318_001558"
     CDS             3802..4155
                     /gene="rplQ"
                     /locus_tag="RJ318_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDV7431397.1"
                     /translation="MRHKHGYRKLGRTSSHRAALLKNLTIALVNSGKIETTLPKAKEL
                     RGYVERLITRARLGDFNAHRAVFASLQDKNATNKLVTEIAPKFKDRNGGYTRIIKTRI
                     RRGDAAEMAFIEFVA"
BASE COUNT         1689 a          597 c          752 g         1170 t
ORIGIN      
        1 ttttttagaa gaaaaaacca caagcaaaaa ttcaaatcaa acccatataa tctcacttaa
       61 acagtctgat gatgaatttt taaatttatt attttctttt ttagtgccac aaagcgatga
      121 agataagaat tttatagaaa aaactcgcac aaaaatcaaa agaaatgagc ataatattgt
      181 tctgataaaa aatccaaatt ttaatgcttt aatagacaca gggtttttag atactattga
      241 cacattaaaa gaaaaattac atatccataa aaccgatttt aaagatatca ctcatattat
      301 cttaacacac gcacatcctg atcatatagg tgctttaatg agcgaagaaa atctttttcc
      361 aaaagctcaa attttaattg ataaaaaaga atatgatttt tggatcaaaa gcgatagaca
      421 agaaattaaa aacaccttgc ttaaacttaa aaatatagaa tttatcgatc attccaaaga
      481 tttgatcttt caaaattcag gcattaaagc catacctgct tacgggcata ccccaggtca
      541 aaatgctatc ataattgatg ataaaatagt cttttgggga gatttacttc atctttatga
      601 tatacaaatc ccaaaaccta aaatcgctat aaaatttgat atagatcaaa atgaggctat
      661 acaaacaagg gaaaaactac ttaaagaatt taaagaaaga aaactcaaag ttatagggac
      721 tcatgtgcct tttatcaaac ctaaattttt agattaatta cttaaaaatt actaaaaatt
      781 aagtaaaaat tttaataatt tttgctaaaa ttatagcctt tttatttcat gaaaggagaa
      841 aattttggca aaagatgatg taattgaaat tgatggcacc gtacttgaag cattgcctaa
      901 tgcaaatttc aaggttgaac ttgacaacaa acatgtaatt ttatgtcata ttgcaggaaa
      961 aatgcgtatg cattatataa gaataatgcc aggtgataaa gtaaaagtag aacttacacc
     1021 ttatagcctt gataaagggc gtataacttt tagatataaa taatctaagt tatttaaaag
     1081 ctaattttag ataaaattag agtttttgcg acaaattaca tcgaactata tgaagaagta
     1141 tttttaaaat ccaccactta ttttgaaaat agttggttat tcataaaacc tgatgtagtc
     1201 gtaaatcaag tggaattcat tcaaggagac gctcatgaaa gtgagaccat cggttaaaaa
     1261 gatgtgcgac aaatgcaaag tagttcgccg taaaggcgtg gttcgcatta tttgcgaaaa
     1321 tccaaaacat aaacaaagac aaggataaac atggctcgta ttgcaggtgt ggatttacca
     1381 aagaaaaaaa gaattgagta tggactaacc tatatttatg gtataggact tttcacttca
     1441 agaaaaattc tagataaagt aggaatttct tatgataaaa gagttcatga gttaagtgaa
     1501 gatgaagcag cagctatccg taaagaaatt caagaaaact atatggttga aggggatttg
     1561 agaaaacaag ttgctatgga tattaaagca cttatggatt taggaagctt tagaggttta
     1621 agacacagaa aaggcttacc agttcgcgga caaaaaacaa aaacaaacgc aagaactaga
     1681 aaaggtaaga gaaaaactgt tggtgcaaaa tcataaggat aaatcatggc aaaaagaaaa
     1741 atcgtaaaga aaaaagtagt taaaaaaaat atagcaaaag gtattgttta tatcagtgcg
     1801 acttttaaca atactatggt tacagtaact gatgaaatgg gaaatgctat cgcttggagt
     1861 agtgcaggtg gtttaggatt taaaggttct aaaaaatcaa ctccttatgc agcacaacaa
     1921 gcagtagaag acgctttaaa taaagcaaaa gaacacggaa ttaaagaagt aggcattaaa
     1981 gtacaaggac caggaagcgg tagagaaact gctgttaaga gtgtaggtgc tatggaagga
     2041 atcaaagtaa ctttcttaaa agatatcact ccattagctc acaatggttg cagaccgcct
     2101 aagcgtcgtc gtgtctaaga tataagaaaa atttaggaga atattatggc aagatataga
     2161 ggaccagtag aaaaattaga aagacgcttt ggtgttagct tagcattaaa aggagaaaga
     2221 agactagctg gcaaaagtgc actagataaa cgcccttatg caccaggaca acacggagca
     2281 agaaaaggta aaattagtga gtatggactt caattaagag aaaaacaaaa agctaaattt
     2341 atgtatggag taagcgaaaa gcaattccgt cgtttatttg ctgaagcagc aagaagagaa
     2401 ggaaatacag gggtattact tatccaactt ttagaacaaa gattagacaa tatagtatat
     2461 agaatgggtt ttgctacaac acgtcgtttt gcaagacaac ttgtaacaca tggacatgtt
     2521 ttagtaaatg gtaaaagagt ggatattcct agctttagag tagaagcagg tgctaaaatc
     2581 gaaattatcg aaaaaagcaa aaacaatcct caaattacaa gagctatcga acttacagca
     2641 caaactggaa tcgttgcttg ggttgatgtt gaaaaagata agagatttgg aattttcaca
     2701 agaaaacctg aaagagaaga agttgtcatt ccggttgagg aaagatttat cgttgagctt
     2761 tactctaaat aataggggct aaatatgaga aatattacaa catctgctta tacgccaaca
     2821 gaatttacaa tagaaaacat tagtgatact gtggctaaaa tcagtgcttg gccttttgag
     2881 atcggctatg gaatcaccct agcccatcct ttacgccgtt tactttacac tagcaccata
     2941 ggatatgctc caactgcgat tcatattgat ggcgtagctc atgaatttga tagcatgcgt
     3001 ggtatgcttg aagatgtagc actttttatc attaatctaa aaaaactacg ctttaaaatt
     3061 aaaggcgact caaataaaga aatagtagaa tttagcttta aaggctcaaa agaaatttac
     3121 ggcaaagatc taaataatga tcaagtagaa gtagtaaata aagacgccta tctagcaaca
     3181 atcaacgaag atgctgaact caaattcaca ttgatcgttg aaaaaggtat tggctatgta
     3241 ccaagcgaag aaattaaaga gcttataaat gatcctaaat ttatagcttt agatgctttc
     3301 tttacacctg taagagaagc aacctatgat attgaaaaag ttttatttga agataatcct
     3361 gattatgaaa aagtggtttt aaccgtaaca actgatggac aaatcactcc aaatgaagct
     3421 tttcaaaatg ctctagaagc tatgtataaa caattatcag tatttgataa aattaccaat
     3481 gttagaagtg taattaaaaa tcaagcaaca agcaatgaac tagaaaatac taaattattg
     3541 caaaacatta cagatttaaa tttaagtgct agaagttata attgtcttga aaaagcagga
     3601 gtggtttaca taggcgagct tgctttgatg agtgtaagtg aacttgcagg gcttaaaaat
     3661 ttaggtaaaa aatctcttga tgaaattaaa aacatcatgg aaagcatagg ttttcctgtg
     3721 ggaacttcta agcttagcga taataaagaa atacttaaaa ataaaatcgc agaattaaaa
     3781 gcacaaaacg aaggataaag aatgagacat aaacatggat atagaaaact tggcagaact
     3841 tcatctcatc gtgctgcctt attaaaaaat ttaactatag ctttagtaaa tagcggaaaa
     3901 atcgaaacca ctctaccaaa agctaaagaa ttaagaggtt atgtagaaag attgattact
     3961 agagcaagac ttggagattt taacgctcat agagcagttt ttgcttcatt acaagataaa
     4021 aacgctacca ataaactagt aactgaaatt gctccaaaat tcaaagatcg caatggcgga
     4081 tatacaagaa tcatcaaaac aagaattcgc cgtggtgatg ccgctgaaat ggctttcatc
     4141 gaatttgtag cttaatcaaa tcctagcttt tgctaggatt aatacttcaa ttaaatatcc
     4201 taaaaata
//
LOCUS       DAPIYB010000100         4159 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.101, whole genome shotgun sequence.
ACCESSION   DAPIYB010000100 DAPIYB010000000
VERSION     DAPIYB010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4159)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4159)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4159
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.101"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(16..1236)
                     /locus_tag="RJ318_001559"
     CDS             complement(16..1236)
                     /locus_tag="RJ318_001559"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDV7431398.1"
                     /translation="MLNNTLFFKQSEIHTISSYANRINDEVKSGDIGYYHLIDTSLNL
                     IDESLQFIQDKEYVKNIVLVGMGGSSCGVKALRDMLFNEKSNQRELFILDNTSSHSFN
                     KTLEKIKLEESLFLIISKTGSTIEVVSLFKLLIEHFKLDMQELKKYFVFITDKDSKLH
                     QEGENLGIKCFFIPANVGGRFSILSAVGIVPLCFCGYNAKALLEGAKACFEDFFTHKK
                     DEILQKAYHYCTHKNANINVLFSYSDAFKGFNEWYIQLIAESLGKKQGYKRIGLTPIA
                     LIGARDQHSFLQLIMDGPKNKTVTFLKIKDAQKAPIIPDIHFKFLDSLSNKVNLHELL
                     NAQCDATMHALIAENLSVDVIELEKLDAWHAGYLMYYYELFTSTCGVMLGINTYDQPG
                     VEVGKLILKNILNS"
     gene            complement(1230..2054)
                     /gene="galU"
                     /locus_tag="RJ318_001560"
     CDS             complement(1230..2054)
                     /gene="galU"
                     /locus_tag="RJ318_001560"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDV7431399.1"
                     /translation="MLQTCIFPAAGYGTRFLPATKTLPKEMLPILTKPLIHYGVDEAL
                     EAGMENMGFVTGRGKRALEDYFDISYELEHQISGTKKEYLLDEIRSLINRCTFTFTRQ
                     NQMKGLGDAVLKGRPLVGDEAFGVILADDLCVNEEGLNVMAQMVKIYEKYRCTIIAVM
                     EVPKEQVSNYGVISGNFVEENLIMVNSMIEKPSPDEAPSNLAIIGRYILTPDIFGILE
                     NTKAGKNGEIQLTDALLTQATNGMVLAYKFQGKRFDCGSVEGFVEATNYFYEKSKC"
     gene            complement(2136..4109)
                     /gene="acs"
                     /locus_tag="RJ318_001561"
     CDS             complement(2136..4109)
                     /gene="acs"
                     /locus_tag="RJ318_001561"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HDV7431400.1"
                     /translation="MLNQNNQELFKPSKEFSRNARIKNLCEYYDLCDEAKEDFEGFWK
                     RQAFEKIEWFSPFSRVLNEDKAPFYKWFEGGTLNVSYQCLDRHMKTRRNKAALIFEGE
                     MGDYEVYTYRRLLHETCKAANLLKKFGVKKGDRVVIYMPMIPETAIVMLACARIGAIH
                     SVVFGGFSPEALRDRIIDAGAKLVVTADGAFRRGKPYMLKPAVDKALSEGCESVEKVL
                     IVIRNNEPIEYIKGRDYVYNELVKNESYKCEPEIMDSEDLLFLLYTSGSTGKPKGVMH
                     ASAGYILWAQMTMEWVFDIKDYDNYWCSADVGWITGHTYVVYGPLACGATTIMHEGTP
                     TYPNSGRWWRMIEEYQISKFYTSPTAIRMLHADAPNEPRKYDLSTLEVLGTVGEPINP
                     SAWKWFYDEIGGTKSPIVDTWWQTETGGHMITPLPGATPLKPGCATLPLPGIFAEVID
                     EEGNKKDEGEDGLLCITKPWPSMIRGIWGNDERYIESYFSQAKKDGKAVYFSGDGAFY
                     DKNGYITITGRTDDVVNVAGHRIGTAEIESAIAKHPSVAESAVVSILDTIKGESLFAF
                     VVLSPASSCDLGGAIETLKELNDILRVEIGPIAKIEKILYTPGLPKTRSGKIMRRILR
                     TIARGEEIKQDISTLEDSKVVETIVKLAKAEFE"
BASE COUNT         1317 a          856 c          554 g         1432 t
ORIGIN      
        1 tttaatgaat tttgattaag aatttaatat attttttaag atcaactttc caacttccac
       61 accaggttga tcataagtgt taatccctag cataacaccg caagttgaag taaaaagttc
      121 ataataatac atcaaatatc ccgcatgcca agcgtcaagt ttttcaagtt ctatcacatc
      181 aacactcaaa ttttcagcga ttaaagcgtg catagttgca tcacattgag cgtttaaaag
      241 ttcgtgaaga ttgactttat tacttaaaga atctaaaaat ttaaaatgaa tatcagggat
      301 aataggtgct ttttgagcgt ctttgatttt taaaaaagtt acagttttat ttttaggtcc
      361 atccatgatg agttgtaaaa aactatgttg atctcttgcg ccaatgagtg caataggagt
      421 taaacctatg cgtttatagc cttgcttttt acctaaactt tcagcaataa gctggatata
      481 ccattcatta aagcctttaa aagcatcgct atatgaaaaa agtacattga tattggcatt
      541 tttgtgtgta caataatgat aggctttttg taaaatttca tcttttttgt gagtaaaaaa
      601 atcttcaaaa caagctttag ctccttctaa aagagctttg gcattatagc cacaaaaaca
      661 aagtggaact atacctacgg ctgaaagtat gctaaaacga cctcctacat ttgcagggat
      721 aaaaaagcat ttaataccta aattttcacc ttcttgatga agttttgaat ccttatcggt
      781 aataaaaaca aagtattttt ttaattcttg catatcaagt ttaaaatgtt caataagaag
      841 tttaaaaagc gatacaactt ctatagtact acctgttttg ctgatgatta aaaacaaact
      901 ttcttcaagc ttgatttttt ctaaagtctt attaaaagaa tgcgagcttg tgttatcgag
      961 tataaaaagc tctctttggt tgcttttttc attaaaaagc atatcacgca aggcttttac
     1021 accacaactt gaacctccca ttcccactaa aacgatattt tttacatact ctttatcttg
     1081 aataaattgc aagctctcat cgattaaatt caaacttgtg tcaataagat gataataccc
     1141 tatatctcca ctttttacct catcattaat acgatttgca taagaactta tagtgtgaat
     1201 ttcactttgt ttaaaaaaaa gcgtattgtt taacatttac ttttctcgta aaaataattt
     1261 gtcgcctcta caaagccttc tacacttcca caatcaaagc gtttcccttg aaatttataa
     1321 gctaaaacca taccattggt tgcttgagtt aaaagcgcgt cggtaagttg aatttcacca
     1381 ttttttcctg ctttagtatt ttctaaaatt ccaaaaatat caggagttaa aatatatctt
     1441 cctatgatag caagattact tggagcttca tcaggacttg gtttttctat catagaatta
     1501 accatgataa gattttcttc tacaaaattt ccagaaatta ctccatagtt tgaaacttgc
     1561 tcttttggta cttccatcac agctatgatg gtgcagcgat atttttcata aatttttacc
     1621 atttgagcca taacatttaa gccttcttca ttaacacaca aatcatcagc caaaattacg
     1681 ccaaaagctt catcgccaac caaaggtcta ccttttaaaa ccgcatcacc taagcctttc
     1741 atttgatttt gtcttgtaaa agtaaaggta caacgattga tcaaagagcg aatttcatca
     1801 agtaagtatt ctttttttgt acctgaaatt tgatgttcaa gttcataaga aatatcaaaa
     1861 taatcctcca aagctctttt tccacgccct gtgacaaatc ccatattttc cattcctgct
     1921 tctaaagctt catcaactcc ataatggatc aaaggcttgg ttaagatagg taacatctct
     1981 ttaggtaaag tttttgttgc aggtaaaaat ctcgtcccat aacctgccgc agggaaaata
     2041 caagtttgaa gcataaaaat ttccttttat ttttttatca ttatagctta tttttatgaa
     2101 ttttcatgca acaaggcaaa gttctttttg ccttgttatt caaactctgc cttagctaat
     2161 ttaacaatgg tttctactac tttagaatct tcaagtgttg aaatatcctg tttgatttct
     2221 tcgcctcttg ctatagttct taaaattctt ctcattattt taccacttct agtttttggc
     2281 aaacctggag tataaagaat tttttctatt ttagctatag gtcctatttc tactcttaaa
     2341 atgtcattaa gttcttttaa agtttctata gctccgccaa gatcacaact ggatgcagga
     2401 cttaaaacca caaaagcaaa caatgactcg cccttaatcg tatccaaaat actcactaca
     2461 gctgattctg ctacacttgg atgtttagca atagcgcttt caatttcagc cgttcctata
     2521 cgatgtcctg caacattaac cacatcatct gttcttcctg tgatggtaat ataaccattt
     2581 ttatcataaa aagcaccatc gccactaaaa tatacagctt ttccatcttt tttagcttga
     2641 gaaaaataac tttctatata gcgttcatca ttgccccaaa ttccacgaat catcgaaggc
     2701 caaggtttag ttatacaaag caacccatct tcaccttcat cttttttatt gccttcttca
     2761 tcaataactt ccgcaaaaat ccctggcaaa ggcaaggtgg cacaacctgg ttttaaagga
     2821 gtggcgcctg gtaaaggcgt gatcatatgc ccacctgttt ctgtttgcca ccaagtatcg
     2881 actataggac ttttagttcc ccctatttca tcataaaacc acttccaagc actaggattg
     2941 ataggctctc caaccgttcc aagcacttca agcgtactta aatcatattt tcttggctca
     3001 ttaggtgcat cagcatgaag cattcttatg gcagttggcg aagtgtagaa tttgcttatt
     3061 tgatactctt ctatcattct ccaccaacgc ccagaatttg gataagtagg agttccttca
     3121 tgcattatag tcgttgcccc acatgctaaa ggcccataaa ctacataagt atgtcctgta
     3181 atccaaccca catcagcact acaccaataa ttatcataat ctttaatatc aaaaacccat
     3241 tccatagtca tttgtgccca aagtatatat cctgcacttg catgcataac tccttttggc
     3301 ttgcccgttg atcctgaagt gtaaagcaaa aacaacaaat cctcactatc cataatttcg
     3361 ggttcacact tataagactc atttttcaca agttcgttat aaacatagtc ccttccttta
     3421 atatattcta taggctcatt attgcgtata actataagta ctttttctac actttcacac
     3481 ccttcactta aagccttatc tactgcaggt tttaacatat aaggtttgcc acgacgaaaa
     3541 gcaccatcag ccgttactac aagtttagct cctgcatcta taattctatc tcttaaggct
     3601 tcaggagaaa accctccaaa tactacacta tgaatagccc caatccttgc acaagctaac
     3661 attactatag ctgtttctgg aatcataggc atataaatta caaccctatc gccttttttt
     3721 actccgaatt ttttaagcaa attggccgcc ttgcaagttt catgcaataa tcttctataa
     3781 gtataaactt cataatcccc catttcacct tcaaaaatca aagcagcttt attgcgtctt
     3841 gttttcatat gacgatcaag acattgataa cttacattta aagttccacc ttcaaaccat
     3901 ttataaaatg gagctttatc ctcatttagc actcttgaaa aaggcgaaaa ccactcaatc
     3961 ttctcaaatg cttgtctttt ccaaaaacct tcaaaatctt ccttggcttc atcgcataaa
     4021 tcatagtatt cacataaatt ttttatacga gcattacgag aaaattcttt acttggctta
     4081 aaaagctctt gattattttg attaagcata aaaactcctt tatggttgtt tttaaacatt
     4141 atataagagt ttatttgta
//
LOCUS       DAPIYB010000101         4122 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.102, whole genome shotgun sequence.
ACCESSION   DAPIYB010000101 DAPIYB010000000
VERSION     DAPIYB010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4122
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.102"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..348
                     /locus_tag="RJ318_001562"
     CDS             <1..348
                     /locus_tag="RJ318_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDV7431401.1"
                     /translation="QFATMKTTAFGVKDETAGVTTLKGAMAVMDIAETAITNLDQIRA
                     DIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDFAAESANYSKANILAQSGSYAMAQ
                     ANSVQQNVLRLLQ"
     gene            494..2212
                     /locus_tag="RJ318_001563"
     CDS             494..2212
                     /locus_tag="RJ318_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin A"
                     /protein_id="HDV7431402.1"
                     /translation="MGFRINTNIGALNAHANSVVNARELDKSLSRLSSGLRINSAADD
                     ASGMAIADSLRSQAATLGQAINNGNDAIGILQTADKAMDEQLKILDTIKTKATQAAQD
                     GQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFINQEFQIGASSNQTIKAT
                     IGATQSSKIGLTRFETGGRISSSGEVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALA
                     EEINKSADKTGVRATFTVETRGIAAVRAGTTSDTFAINGVTIGQVAYEDGDGNGALVA
                     AINSVKDTTGVEASIDANGQLLLTSREGRGIKIDGNIGGGAFINADMKENYGRLSLVK
                     NDGKDILISGSNLSSAGFGATQFISQASVSLRESKGRFDANIADAMGFGSANKGVVLG
                     GYSSVSAYMSSAGSGFSSGSGYSVGSGKNYSTGFANAIAISAASQLSTVYNVSAGSGF
                     SSGSTLSQFATMKTTAFGVKDETAGVTTLKGAMAVMDIAETATTNLDQIRADIGSVQN
                     QLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKYNILAQSGSYAMSQANAVQQN
                     VLKLLQ"
     gene            complement(2243..>4122)
                     /locus_tag="RJ318_001564"
     CDS             complement(2243..>4122)
                     /locus_tag="RJ318_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7431403.1"
                     /translation="ENNFNKNLKALSGFEYNNLRKKLEDLKELREFTFTQGKDNLDIN
                     IIKKRNLKKMYQDPIKELEKNLEYFKDFTRYPVLFFYGFGNGILYKILLQNQALKRII
                     IFEKELELIFLALNFIDFSKDLSLGRLIILHHDDINLPKMDKVFRLIGDLFYRSYNLH
                     IANDFYEHYKEDILKLNKLNMQIIKNHNLMHGNDPKDALQGIEQFVYNLPSMITHPSY
                     KELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDY
                     VCMLERDEIVAECFNNDFKDFDKDIIFLVASLVHKKTISYLKKNKRKYILIIKGQPFA
                     RCLGLDDYGYINAGMSVSHMAYELAENLGHNNIILIGQDLAYAKDGQTHSQGFIHANL
                     HNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRQIFENFIAFSKSKTYNCTEGGARIE
                     SAIEKPFKELCEDLLKNKKDKKFKKLQVLNTKEQVKLGLKIYQKIKKNMNLSLNFKKE
                     CKKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYLFLQEILGPTLHHEQSILT
                     PLYLKDIKDESDKQNKLFAWVYAHEALIENIIELLEVQDKRLKIAILPLLDFLEKKKA
                     L"
BASE COUNT         1356 a          642 c          703 g         1421 t
ORIGIN      
        1 cagtttgcaa ctatgaaaac aactgctttt ggagtaaaag atgaaacagc aggtgttacc
       61 acacttaaag gcgctatggc tgtgatggat atagctgaaa cagctataac aaatcttgat
      121 caaatcagag ccgacattgg ttcggtacaa aatcaagtta catcaactat aaacaacatc
      181 accgtaactc aagtaaacgt taaagcagca gaatcgcaaa tccgtgatgt agactttgca
      241 gccgagagtg caaactactc taaagcaaat atcttagctc aaagcggctc ttatgccatg
      301 gcacaggcta attctgttca acaaaatgtt ttaagattac tacagtagtt tacaaaagct
      361 gcaatatata caaatccaag cctagtttag aactaggctt ttttatttta aactctaaaa
      421 tttttaatta aactaaaact tggaacactt tttgctttaa tcttttcgat gcaatatttt
      481 gaaaggattt aaaatgggtt ttaggataaa caccaacatc ggtgcattaa atgcacatgc
      541 aaattcagtt gttaatgcta gagaactgga taagtcttta agtagactta gttcaggtct
      601 tagaatcaac tccgcagcag atgatgcttc agggatggcg atagcagatt ctttgcgttc
      661 acaagcagcc actttaggtc aagctatcaa caatggtaat gatgctatag gtatcttaca
      721 aactgctgat aaggctatgg atgagcaact taaaatctta gatacaatca aaactaaggc
      781 aactcaagcg gctcaagatg gacaaagttt aaaaacaaga accatgcttc aagcagatat
      841 caaccgttta atggaagaac ttgacaatat cgcaaatact acttcattta acggtaaaca
      901 acttttaagt gggaatttta tcaatcaaga atttcaaatc ggtgcaagtt caaatcaaac
      961 tataaaagct actataggag caactcaatc ttctaagata ggtttaacac gctttgaaac
     1021 aggaggaaga atttcatcta gtggcgaagt gcaatttact cttaaaaatt acaatggtat
     1081 agatgatttt cagtttcaaa aagttgtgat ttcaacttca gttggaacag gacttggagc
     1141 tttagcagaa gagatcaata aaagtgctga taaaacaggt gttagagcta cttttacagt
     1201 agaaactaga ggtatagctg cagttagagc aggaactact tcagatactt ttgctatcaa
     1261 tggagtaact ataggtcaag tagcctatga agatggtgat ggaaacggtg ctttagttgc
     1321 tgcaatcaat tcggttaaag ataccactgg agttgaagct tcgatcgatg ctaatggaca
     1381 acttttactt acttcaagag aaggtagagg gattaaaatc gatggtaata taggtggagg
     1441 tgcctttatc aatgctgata tgaaagaaaa ctatggccgc ttgtctttag ttaaaaatga
     1501 tggtaaagat attttaatca gcggtagcaa tctttcttct gcaggctttg gtgcaactca
     1561 atttatctct caagcttctg tttctttaag agagtcaaaa ggaagatttg atgctaatat
     1621 cgctgatgct atgggatttg gttctgcaaa caaaggagtt gtgttaggtg gttattcttc
     1681 tgttagtgcc tatatgagta gcgcaggaag tggattttct tcaggttcag gttattctgt
     1741 aggtagcggt aaaaattatt ccacaggttt tgcaaacgct atagctattt cagctgcttc
     1801 gcaactttct acggtatata atgtttctgc aggctcaggt ttttcaagtg gttcaacact
     1861 ttctcagttt gcaactatga aaacaactgc ttttggagta aaagatgaaa cagcaggtgt
     1921 taccacactt aaaggcgcta tggctgtgat ggatatagct gaaacagcca caacaaatct
     1981 tgatcaaatc agagcagaca ttggttcggt gcaaaatcaa cttcaagtta ctataaacaa
     2041 cattactgtt actcaagtca atgttaaagc agctgaatca accataagag atgtagactt
     2101 tgcagctgag agtgcaaatt tttctaaata taacatcctt gcgcaatcag gttcttatgc
     2161 tatgagtcag gctaatgcag tgcagcaaaa tgttttaaaa cttcttcaat aatttcttag
     2221 atgcttttat gcatctaagc ttttaaagtg cttttttctt ttctaagaag tctagcaaag
     2281 gtaaaatagc gattttaagt cttttatctt gaacttctaa aagttctatg atattttcta
     2341 tcaaagcttc gtgtgcataa acccaagcaa aaagtttatt ttgtttatca gattcatctt
     2401 tgatatcttt aagatataaa ggcgttaata tactttgttc atgatgtaaa gtagggccta
     2461 aaatttcttg caaaaagaga tattttttat ttgaaagttt ttctttgatt ttgtctatat
     2521 tttgatttat ttgttcaaga gagagtttgt tctttccatg ggtaagattg tgaatttgtt
     2581 tttgaacttt tttacactct tttttaaaat tcaaggataa attcatattt tttttgattt
     2641 tttgatagat ttttaatccg agttttactt gttctttagt atttaaaact tgtaattttt
     2701 taaatttttt atctttttta tttttgagta aatcttcgca aagttcttta aaaggttttt
     2761 ctatagcgct ttctatccta gcacctcctt cagtgcaatt ataagtttta cttttgctaa
     2821 aagcaatgaa attttcaaaa atttgtctaa aaagtgtcca aatttcagaa ctttgaactt
     2881 ttccatttcc tccataagct gtagtgctaa atctatctaa gtccctttca tagtctccat
     2941 tgtgtaaatt agcatggatg aaaccttgag aatgtgtttg cccatctttg gcataagcta
     3001 aatcctgacc tatgagaatg atgttgttat gtcctaaatt ttcagccagt tcataagcca
     3061 tatgagatac actcatgcct gcgttaatat atccataatc gtctagcccc aagcatctcg
     3121 caaaaggctg gccttttatg attaaaatgt attttctttt atttttttta agataagaaa
     3181 tggttttttt atgcaccaaa gaagctacta gaaaaatgat gtctttatca aaatctttaa
     3241 aatcattatt aaaacattca gctactattt catcgcgttc caacatacaa acataatcag
     3301 gttttatacc atgcttagct aaaataggat aagaagaatc cgcacaaaaa atcgtagctt
     3361 tactagcata cttttttaat aaaggcaatt gtttagtaag agatggtcct gtagaaacaa
     3421 tgatagctgt atcacttaaa ttttttcttt tggaaagtaa ttctttataa ctaggatggg
     3481 taatcattga aggaagatta taaacaaatt gctctatgcc ttgaagagca tcttttggat
     3541 cattaccatg cataagattg tgatttttga tgatttgcat gttgagttta ttaagtttta
     3601 aaatatcttc tttatagtgt tcataaaaat cattagcaat gtgtagatta taagaacgat
     3661 aaaacaaatc ccctatcaaa cgaaaaactt tatccatttt aggaagatta atatcatcat
     3721 gatgtaaaat aatgagtcgc cctaagctta aatctttgct aaaatctatg aaatttaagg
     3781 ccaaaaagat aagctctaat tctttttcaa agatgattat tcttttaagt gcttgatttt
     3841 gaagtagaat tttatataaa attccatttc caaaaccata aaaaaaaagc acaggatagc
     3901 gtgtaaaatc tttaaaatat tctaaatttt tttcaagctc tttgatggga tcttgataca
     3961 ttttttttaa atttcttttt tttatgatat tgatatcaag attatctttt ccttgagtga
     4021 aagtaaattc tctaagctct tttagatcct caagtttttt gcgtaagttg ttatactcaa
     4081 aaccgcttaa agcttttaaa tttttgttaa aattattttc tt
//
LOCUS       DAPIYB010000102         4121 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.103, whole genome shotgun sequence.
ACCESSION   DAPIYB010000102 DAPIYB010000000
VERSION     DAPIYB010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4121
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.103"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            115..690
                     /locus_tag="RJ318_001565"
     CDS             115..690
                     /locus_tag="RJ318_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HDV7431404.1"
                     /translation="MKKIFISFVVLATCLWAKNTAYTDEVVSLYLNKDDTKVIGRLLP
                     TNPFEVLKSENNRVLLKIDGYVNPKAPSVIYFNDSQRIIVAAFSKNTKLNFSQRITGK
                     NGKWDKVSLEIWADKKEFVKDNKEMLNRAKELFVNNCGICHAIHKEKEFTANAWPAIF
                     RSMADRTGIDKKDRWLVIEYLQKNAKDFKTK"
     gene            701..3217
                     /locus_tag="RJ318_001566"
     CDS             701..3217
                     /locus_tag="RJ318_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HDV7431405.1"
                     /translation="MLDRRKFLKIGASLSALPLIPSLSAGKTVEASKVSLGLVKNGEV
                     ITAAHWGILKLTIKDGKIVKSEPWEKVTKMDNPLQHYTADMVYKSRVKYPYVRKSYLE
                     NPDNPKPELRGKDEFVRVSYDEAIKLIAKELKKTRDSKGASAIFGGSYGWKSSGNMQN
                     SRILLHRFLNVTGGFVGATGDYSTGASQVIMPYVVGSIEVYEQQTSWENILSDSKYVV
                     IWGADPLSTLRIAWTSNEQRGLAYFEKLKDSKIKVICIDPVKTTTAKFLNAKWIAPRP
                     NTDVALMMGMASHLIAKKKVNYEFLDTYTTGFDKFKDYLEGKEDGVKKDTKWASKICG
                     IDEKTIKNLAETFYDNSTMIMSGWGMQRAHHGEQPHWMLVTLCAMLGQIGTKGGGFGL
                     SYHYSNGGVPTCKGGVIGGMTAGSLGIWKNGKFKGLSKAEASSEGAEWLQNAASYSFP
                     VARIADALLHPGKTIDHNGAKITYPDIDFIYWVGGNPLVHHQNTNTNVKAWRKPRTVV
                     VNEIYWTPTAKMADIVMPVTSSYERDDITMTGDYSNMHIAPMKQAVEPVGESKDDYVI
                     FSDICKIYGKDVFNAYTENGKKAKDFIKEYYNSALKQTQSFGEAFATPMPSFEEFWAK
                     NEPITFEPTAESLEWTRFSEFIEDPILNALGTDSGLIEIYSETIKNYNYDDCKAHPTW
                     FEPIEWLGNASKEAPFHLLTNHPRDRLHSQLCHTSLRDTYAIKDREPILINSKDAKKL
                     GIKNGDVVRVFNKRGEVLAGAVVSDEIMQGVVRLCEGAWYDPNENGLCKCGNANVLTM
                     DIPTSKLANGNISHTGLVNIEKFKGELPKLTAFSAPKGAN"
     gene            complement(3241..4116)
                     /gene="zupT"
                     /locus_tag="RJ318_001567"
     CDS             complement(3241..4116)
                     /gene="zupT"
                     /locus_tag="RJ318_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HDV7431406.1"
                     /translation="MQFTFEQIFIAMLLTLFAGFSTAIGSIIAFFSRKDDLRVLSLGL
                     GFSAGVMIYISFMEILPTALKDFKNHYDSHWAELLGLACFFGGILISLLIDKLIPEDV
                     NPHEPKEDLSELKICPLPQKGQNPPKFHPGEKLHQINTKALKRTGIFTALAIAIHNFP
                     EGFATFISSLDNLTLGIAIAIAVAIHNIPEGLAVSLPIYHATGDKKKAFIYSALSGFA
                     EPLGAFVGALILLPFIGDLTLAISFAVIAGIMVFISLDELLPAAKTYDKAHDSLYGLI
                     AGMAIMALSLNLLGQ"
BASE COUNT         1518 a          683 c          765 g         1155 t
ORIGIN      
        1 taatattaaa gcaccaaaaa taagtaatct tagtaaaaat tatacaatta agtaataatt
       61 aaattgcata gtattaaaat acatttacat caaatttata ttaaggaatt agtaatgaaa
      121 aaaattttca tttcttttgt tgtcctagcg acatgtttat gggcaaaaaa taccgcctat
      181 accgatgaag ttgtatcgct ttatcttaat aaagatgata ctaaagtcat aggaagactt
      241 ttacctacaa atccttttga agtattaaaa agcgaaaata acagggtttt gctaaaaatt
      301 gatggttatg taaatcctaa agcaccttct gtgatttatt tcaatgactc tcaaagaatt
      361 attgttgcag ctttttctaa aaatacaaaa ttaaatttct ctcaaagaat aactggaaaa
      421 aatggcaaat gggataaggt aagccttgaa atttgggcag ataaaaaaga atttgtcaaa
      481 gacaataaag aaatgttaaa tcgagccaaa gagctttttg taaataactg cggaatttgc
      541 cacgctatcc acaaagaaaa agaatttaca gctaatgctt ggcctgcaat tttccgttct
      601 atggctgata gaacaggtat tgataaaaaa gacagatggc tagttataga atacttacaa
      661 aaaaacgcaa aagattttaa aacaaaataa ggagaaaagc atgctagata gaagaaaatt
      721 tttaaaaatt ggagcgagct taagtgcttt acctctcatt ccaagcttaa gtgcaggaaa
      781 aaccgtagaa gcttcaaaag ttagcctcgg acttgtaaaa aatggagaag tgatcaccgc
      841 agcacactgg gggattttaa aacttactat aaaagatggc aaaatagtaa aaagtgaacc
      901 ttgggaaaaa gttacaaaaa tggataatcc tttacagcac tataccgccg atatggttta
      961 taaatctcgt gtgaagtacc cttatgtgcg taaatcctac cttgaaaatc ctgacaatcc
     1021 taaacctgaa cttcgcggaa aagatgagtt tgttcgcgta agttatgatg aagcgatcaa
     1081 actcatcgcc aaagaactta aaaaaacaag agatagtaaa ggcgcaagtg cgatttttgg
     1141 tggaagttat ggctggaaat caagtggaaa tatgcaaaac tcacgtatct tgcttcatag
     1201 atttttaaat gtaacaggtg gatttgtagg agctacaggg gactattcta caggagcttc
     1261 tcaagtgatt atgccttatg ttgtaggatc gattgaagtt tatgagcaac aaacctcatg
     1321 ggaaaatatc ttaagtgatt ctaaatatgt tgtgatttgg ggtgctgatc cactttctac
     1381 tttacgtata gcttggactt caaacgaaca aagaggtttg gcatattttg aaaaacttaa
     1441 agacagtaaa atcaaagtaa tttgtataga tcctgtaaaa accactacag caaaattttt
     1501 aaatgccaaa tggatagctc cacgcccaaa taccgatgta gctttaatga tgggcatggc
     1561 aagccattta atcgctaaga aaaaagtcaa ttacgagttt ttagacactt acactacagg
     1621 ctttgataaa tttaaagact atttagaagg caaagaagat ggagttaaaa aagataccaa
     1681 atgggcaagt aaaatttgcg gtatcgatga aaaaactatc aaaaatttag ctgaaacttt
     1741 ttatgataat tctactatga ttatgagtgg ttggggtatg caaagagcac atcatggcga
     1801 acagcctcac tggatgttag ttactctttg tgcgatgtta ggacaaatcg gcacaaaagg
     1861 aggtggtttt ggactaagct accattacag caatggtggt gttccaactt gcaaaggcgg
     1921 agtgatcggc ggtatgacag caggtagctt agggatttgg aaaaatggta aatttaaagg
     1981 cttaagcaaa gcagaagctt caagcgaagg tgcagaatgg cttcaaaatg cagcgagtta
     2041 ttctttccct gtagcaagaa tcgctgatgc tttacttcat cctggaaaaa ccatagatca
     2101 taatggtgct aaaatcactt atcctgatat tgattttatc tactgggtag gtggaaatcc
     2161 tttagtgcat catcaaaata ccaacactaa tgtaaaagca tggagaaaac cacgcaccgt
     2221 tgtggtaaat gaaatttact ggactccaac agctaaaatg gcagatattg ttatgcctgt
     2281 aacttcatct tatgaaagag atgatattac catgacagga gattattcaa atatgcatat
     2341 agctcctatg aaacaagcag ttgagcctgt gggtgagagc aaagatgatt atgtaatttt
     2401 ctctgatatt tgcaaaattt atggaaaaga tgtctttaat gcctacacag aaaatggcaa
     2461 aaaagctaaa gatttcatca aagaatacta caatagcgcc ctaaaacaaa ctcaaagttt
     2521 tggtgaagct tttgctactc ctatgccaag ttttgaagaa ttttgggcta aaaatgaacc
     2581 aatcactttt gaaccaacag ctgaaagttt agaatggact cgtttttcag aatttataga
     2641 agatcctatc ttaaatgctc tgggtacaga ttcaggactc attgaaattt actcagaaac
     2701 gattaaaaat tataattatg atgattgcaa agcccaccct acttggtttg agcctattga
     2761 atggcttgga aatgcaagca aagaagcacc tttccactta cttacaaatc acccaagaga
     2821 tcgcttgcac tctcaacttt gccacacaag cttaagagat acttatgcaa taaaagatag
     2881 agagccaatt ttaatcaatt ctaaagatgc aaaaaaactt ggtataaaaa atggcgatgt
     2941 agtgcgtgtg tttaataaac gcggtgaagt tttagcaggg gcagttgtaa gtgatgaaat
     3001 catgcaaggg gttgtaagac tttgcgaagg tgcttggtat gatcctaatg aaaacggact
     3061 ttgcaaatgt ggaaatgcaa atgttttaac catggatata ccaacttcaa aacttgccaa
     3121 tggcaatatc tctcacacag ggctcgtaaa catagaaaaa tttaaaggtg aattaccaaa
     3181 acttactgcc tttagcgccc caaaaggtgc gaactaaatt taagaaagcc gcaaggcttt
     3241 ctattgccca agcaaattta aacttaaagc cattattgcc attcctgcga taagtccata
     3301 taaactatca tgagccttat cataagtttt tgcagcgggc aaaagctcat caagagatat
     3361 aaaaaccata attcctgcaa tcacagcaaa acttatagcc aaagtaagat cgcctataaa
     3421 aggcaataaa atcaaagctc caacaaaagc acccaaaggc tctgcaaaac ccgaaagagc
     3481 tgaataaata aaagcttttt tcttatctcc tgtagcatgg taaattggca aactcacagc
     3541 caaaccttct gggatattgt gtatagccac agctatagct atagcaattc ctaaagtaag
     3601 attatcaaga cttgaaataa aagtagcaaa accttctggg aaattatgta tagcaatagc
     3661 caaagctgta aaaatccctg tacgttttaa agctttagta ttgatctgat gcaacttttc
     3721 tccaggatga aatttcggag gattttgtcc tttttggggc aagggacaaa tttttaactc
     3781 gcttaaatcc tctttaggct cgtgaggatt gacatcttcg gggattaatt tatcaatcaa
     3841 taaagatatt aaaattccac caaaaaaaca agctaatccc aaaagctcag cccaatgcga
     3901 atcatagtga tttttaaaat ctttaagtgc agtaggtaaa atttccatga aagaaatgta
     3961 tatcattact ccagctgaaa aaccaagccc caaagaaagc actcttaaat catcttttct
     4021 ggaaaaaaag gctattatag aacctatagc cgtagaaaaa cctgcaaaaa gagtcaatag
     4081 cattgcgata aaaatttgtt caaatgtaaa ttgcattaat a
//
LOCUS       DAPIYB010000103         4022 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.104, whole genome shotgun sequence.
ACCESSION   DAPIYB010000103 DAPIYB010000000
VERSION     DAPIYB010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4022
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.104"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(40..426)
                     /locus_tag="RJ318_001568"
     CDS             complement(40..426)
                     /locus_tag="RJ318_001568"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431407.1"
                     /translation="MDDLNCDFIHFFNTIYIKLIELCGSNLERFTPLKDLKKLGFHII
                     CSKGNRGALANLLLFNEISSFFKIIEKYDYNFKECQTVYDLLYEKRNLLNIIDTIGIE
                     LCNKICKNLKEDDENFYHPKIFKKAL"
     gene            complement(414..734)
                     /locus_tag="RJ318_001569"
     CDS             complement(414..734)
                     /locus_tag="RJ318_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HDV7431408.1"
                     /translation="MKEINIIDFGLMGKQISALFYLLGYEIGVYNKSKLNIYEFEKQI
                     KLLQRKIDFSNFNAGKINIYQHIEDLKNSLTIESLNEDLNLKKEIMQILRDNNIVFSR
                     VWMI"
     gene            complement(807..1034)
                     /locus_tag="RJ318_001570"
     CDS             complement(807..1034)
                     /locus_tag="RJ318_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002798100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferase"
                     /protein_id="HDV7431409.1"
                     /translation="MCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLN
                     GNSSIGKNCFLATRVSLLPCVNLEDNCIVSR"
     gene            complement(1049..1350)
                     /locus_tag="RJ318_001571"
                     /pseudo
     CDS             complement(1049..1350)
                     /locus_tag="RJ318_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002807488.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1460..2614)
                     /gene="legC"
                     /locus_tag="RJ318_001572"
     CDS             complement(1460..2614)
                     /gene="legC"
                     /locus_tag="RJ318_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase LegC"
                     /protein_id="HDV7431410.1"
                     /translation="MFKKEISFIKSLFNKENIALHEPCFIGNEKKYLLECIDSGFVSS
                     VGEFVTRFEEALKEKTKARFVIATNTGTAALHIALLANGIDENCEVITQSISFVATAN
                     AIAYTGAKPVFLDIDENTLSLSPKALEHFLENQTYQKDNLSYNKTTHKLIKACVIMHT
                     FGLSAHIKAIKELCEKYHILLIEDAAEALGSTYENKALGTFGKCGILSFNGNKIITGG
                     CGGAILSDDENLAKLARHLSTTAKIPHPYEYDHDRIAYNYRLCNINAAILFAGLENLE
                     LFLENKRELAKIYKDFFKNHDKCKFIDEKSNEKSNFWLNTLLFKNENLRNIFLEECLK
                     NNIFVRPVWKSLPSLKAFQNCQSNELINTKKLEKRLINLPSSVRIANKKE"
     gene            complement(2607..3578)
                     /gene="legB"
                     /locus_tag="RJ318_001573"
     CDS             complement(2607..3578)
                     /gene="legB"
                     /locus_tag="RJ318_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,6-dehydratase LegB"
                     /protein_id="HDV7431411.1"
                     /translation="MRNILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLE
                     KSPFLKDMEVISGDLRDSFFCEKITKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGT
                     LNMLEAAKKNEISHFIHTSTSEVYGTAFYVPIDEKHPLQPQSPYSASKIAADMMALSY
                     YNSFNLNVNIARPFNTYGPRQSARAIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDT
                     CEGFISLLNLKHFGEVYNIGSGVEYSMQEVLDLIQKILDSKVKIIQDEQRLRPKNSEV
                     FRLCCDANKLKKATNWQSKISLEEGLRQSIEYFKENLENYKSELYNV"
     gene            complement(3575..>4022)
                     /locus_tag="RJ318_001574"
     CDS             complement(3575..>4022)
                     /locus_tag="RJ318_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7431412.1"
                     /translation="LKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNL
                     AIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI
                     KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR"
BASE COUNT         1257 a          643 c          549 g         1573 t
ORIGIN      
        1 cacttatgtt tgttttattt ttctacctaa aattcctttt tataaggcct ttttaaagat
       61 ttttggatgg taaaaatttt catcatcttc ttttaaattc ttacaaattt tattacaaag
      121 ttctatgcct atagtgtcga taatatttaa caaatttctt ttttcataaa gcaaatcata
      181 aactgtttga cattctttga aattataatc gtatttttct ataattttaa aaaatgatga
      241 aatttcattg aacaaaagta aatttgctaa agctcctcga ttgcctttac tgcaaatgat
      301 atgaaatcct aattttttaa gatctttcaa tggggtaaat cgttctaaat tagaaccaca
      361 aagttctatt aatttgatat aaatagtatt gaaaaaatgt ataaaatcgc agtttaaatc
      421 atccatactc tcgaaaaaac tatattatta tctctaagaa tttgcatgat ttcttttttt
      481 aaatttaaat cttcatttaa gctttctata gtcaagctat ttttaagatc ttctatatgt
      541 tggtaaatgt ttatttttcc ggcgttaaaa ttagaaaaat ctatttttct ttgtagaagt
      601 tttatttgtt tttcaaattc gtatatattg agcttgcttt tattataaac acctatttca
      661 tagcctaata aataaaataa agcacttatt tgcttaccca ttaaaccaaa gtctatgata
      721 ttaatttctt tcattgtttt ttccttgttt taattatatt tttatgaaaa ataagttgat
      781 tggatgtgta gtttttgcta ataatactac ctgcttacta tgcagttatc ttctaagttt
      841 acgcaaggca acaggctaac tctagtagct aaaaaacaat tttttcctat gcttgaattt
      901 ccattaagtg tagcataagg gcttaaaata cttccttctc ctactttaca atcatgagct
      961 atgcttgaat aaatattaca aagcacaaaa tctcctatat ttgaattagc attaatggtt
     1021 acaaaaggac acactataac cccttgtcct attttagctt cttttgaaac aaaagattga
     1081 ggatgtataa aagtgataaa attacatgat tttttttgaa agttttacaa ggattttttt
     1141 tcttaaattg atttgtccta cacctaaagc aaaagatgct ttttgaatca actttttatc
     1201 gaaattatct tcattgccta gatattttaa gtcaaaaaaa ttattttctt gtatatcaat
     1261 atagcctata atttcgtaat ttgcatcttt taaataagaa taaagctctc tagtaaagcc
     1321 acccgctcct atgatgatga catttttcac gtacttctcc taaaagaaga agtaaaaaaa
     1381 tcaaatcccc cccccccgct attctcatat tttttcttat taaatttttt taatgctttg
     1441 aattaaattt tgcaacgcat cattcctttt tatttgctat tctaacgcta ctaggtaaat
     1501 taatcaagcg tttttctaat tttttagtgt ttataagctc attgctttga cagttttgaa
     1561 aagcttttaa actcggtaag cttttccata caggacggac gaaaatatta tttttcaagc
     1621 attcttctaa aaaaatattt cttaaatttt catttttaaa aagcaaggta ttgagccaaa
     1681 aattgctttt ttcattgctt ttttcatcga taaatttaca tttatcgtga tttttaaaaa
     1741 aatccttgta aattttagca agttctcttt tgttttctaa aaaaagttct aaattttcaa
     1801 gtcctgcaaa caagattgct gcgtttatat tgcaaagacg gtaattataa gctatcctat
     1861 catgatcgta ttcgtaagga tgggggattt tagctgtggt gctaaggtgt cttgcaagtt
     1921 tggctaaatt ttcatcatcg cttaatatcg ccccaccgca tccacctgtg atgattttat
     1981 tgccattaaa gcttaaaatt ccacactttc caaaagtgcc taaggccttg ttttcatagg
     2041 tgcttcctaa ggcttctgca gcatcttcaa ttaaaaggat gtggtatttt tcacaaagct
     2101 ctttgatggc ttttatatga gcgcttaaac caaaggtgtg cataataaca caagctttga
     2161 tgagtttgtg tgtggttttg ttatagctaa gattatcttt ttgataagtt tgattttcta
     2221 aaaaatgctc taaagcctta ggacttaaac ttagagtgtt ttcatctata tctaaaaaaa
     2281 cgggttttgc acctgtataa gcgatagcat tggccgtagc gacaaagctt atgctttgag
     2341 tgatgacttc gcagttttca tcgataccat tagctagtaa agcgatatga agggctgctg
     2401 tgcctgtatt tgtagcgatg acaaagcgtg ctttggtttt ttcttttaaa gcttcttcaa
     2461 aacgcgttac aaattctcct acgcttgaaa caaaaccgct atcgatacat tctaagagat
     2521 attttttctc attgcctata aagcaaggct catgtagggc gatattttct ttattaaaaa
     2581 gactttttat aaaagaaatt tcttttttaa acattataaa gctcgctttt ataattttct
     2641 aaattttctt taaaatactc tatgctttgt ctcaagcctt cttctagact tattttgctt
     2701 tgccaatttg tagctttttt aagcttgttt gcatcgcaac aaagtctaaa aacttcgcta
     2761 tttttaggac gcaatctttg ttcatcttgg atgattttta ctttagaatc taaaattttt
     2821 tgtatgagat caagtacttc ttgcatggag tattccactc ctgagcctat attataaact
     2881 tctccaaaat gttttaaatt taaaagagag ataaaaccct cgcaagtatc tagcacaaaa
     2941 tttaaatccc ttttagggct taaatctcct agtttgattt cctttgctcc acttaaaatt
     3001 tgtgtgatga tggtaggtat gatagccctt gcgctttgtc ttggtccata ggtgttaaaa
     3061 gggcgtgcaa tattgacatt taaattaaaa gaattataat aactcagcgc catcatatct
     3121 gcagcgattt tgcttgcaga ataagggctt tgaggttgta aagggtgttt ttcatcgata
     3181 ggtacataaa aggctgtgcc ataaacttcg cttgttgagg tgtggataaa atgtgaaatc
     3241 tcgttttttt tagctgcttc gagcatattt aaagtgccat tgacattggt atccacatag
     3301 ctttgtgggg ctgtgtagga gtaggggata gcgattaaag cgccaagatg aaagatcgca
     3361 tctatatttt tggtgatttt ttcgcaaaaa aaactgtctc ttaaatctcc acttataact
     3421 tccatgtctt ttaaaaaagg acttttttct aaatgtcccc aaaaattaaa agaattatac
     3481 tgacttaaag ctctgacttt aaaacctttt ttgaccaaac tttcacaaag atgagaacct
     3541 ataaaaccat cagcacctgt aactaaaata tttctcacct tctcaccctt tccatccatt
     3601 tatctaattt tctttcttta agtttttctt ctaaaggaag tatattttta atcaaagcat
     3661 tttcttgtgc tttaatatgt ccataaacta attccataaa ttctaaatgt tcttttatcc
     3721 aaagaatact tttattaaaa gcatcttctt tggttttagg atttaaaaca taaattctag
     3781 caagattaag ttcaaattga gtacgcagag gttgtaaaat ttcatataaa tcttgcattt
     3841 gttttatatc ttcaagttta tttttaaacc catctatttt ttcaatagct aaatttaaat
     3901 attcttcttt ttcatttaaa ctcaaatata tactttgtat tttttcaaaa tcattgctga
     3961 gtattttact aaaatctcta caatgtttaa tactttgata aactttataa taagccttaa
     4021 gt
//
LOCUS       DAPIYB010000104         3966 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.105, whole genome shotgun sequence.
ACCESSION   DAPIYB010000104 DAPIYB010000000
VERSION     DAPIYB010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3966
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.105"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..629
                     /locus_tag="RJ318_001575"
     CDS             <1..629
                     /locus_tag="RJ318_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002805434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7431413.1"
                     /translation="YIIIIDEINRGNVSKIFGELITLIEASKRIGEKEELKVTLPYSG
                     KEFGVPKNVYIIGTMNTADRSITSLDTALRRRFEFIEMMPDVSKLSMDCEGINLQELL
                     KAINTRIEYLLDREKTIGHAFFISVENLEDLKKVFKNKIIPLLQEYFYNDYALIDAVL
                     NKNGMLEISVENKDYLKNMTEFIESDKIVYKFSDSNNWSKDTFIKIYE"
     gene            629..1966
                     /locus_tag="RJ318_001576"
     CDS             629..1966
                     /locus_tag="RJ318_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="McrC family protein"
                     /protein_id="HDV7431414.1"
                     /translation="MKTSNTFSIIEYQAFSKEDLKEIFKEKAEGFYKELEDFAKNNEN
                     LLGFKNKNSLKAKNYVGIIQTKSGVLEILPKCTNLDSYKKEDSSSNHDKEKLRRCYEL
                     DNISKNNDFYEKDFKFNPKNLLINMLKTLKNSPFKKSQISSLQSSKIPLFEVFITMFL
                     DEFDSVYKKGLMRSYLSCEENRAFLKGKLLFNEHIKQNLIHKERFFTSNDEFVLDIAP
                     NRLIKSTLNFLKSKTSLNKFRLIKAMQMLDEVEFSKNYEKDFSYKISRHFDYYESLLL
                     WCKIFLKNESFMPYHGKNEAFALLFPMEKIFEDYVAYMLKKVNPAQDIKVQNDGKYLI
                     SKNDEKCFMLKPDLYIENKMILDTKWKIPNDSEDEKKQGIEQSDLYQMFAYACKFKIY
                     DIKLVYPLCEKTQDLQRKIAEKFFVFKASEHLYFKEQGQKDIKVQVFFAPLPF"
     gene            complement(1955..2758)
                     /locus_tag="RJ318_001577"
     CDS             complement(1955..2758)
                     /locus_tag="RJ318_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDV7431415.1"
                     /translation="MLEILNFTFFQNALLGAILVSIACGIIGTLVMINRLFSMAGGIT
                     HGAFGGIGIAFYFSLPILLSTGIFTLFLAFLVAFLAKRYEHRSDSIIAVIWAFGMAVG
                     IILIDLSPSYNTDLMAYLFGSILAVGTQDLWLMALVDSVVVLLIFLFYRQFEALSFDA
                     EFAKVRGINTSFFHYLLIALMAFCIVISIRLVGLILVMALLSIPSFIAENFTKRLGFI
                     MILASFLSMIFCVLGLILSYYLNLSSGACIIAVACFGFLVHLIEKFLKR"
     gene            complement(2751..3605)
                     /locus_tag="RJ318_001578"
     CDS             complement(2751..3605)
                     /locus_tag="RJ318_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDV7431416.1"
                     /translation="MLFFEISNLNYAYDNEIILKNINLSYDNKDFLSIIGPNGAGKST
                     LVKLILGLLKSKNEIHFKALQRKEIGYVPQHTLANPNFCPRVLEIVLMGLVSKKIFGF
                     YGKKDKEKAMQALKSVGMEKFWNKTIDSLSGGQRQRVFIARALASECKMLILDEPTAS
                     VDNKSAIQIFELLSSLHQKGMGILLICHDINLVLAYSDKIAHLNKELFLHTNTKEKEK
                     SSFLKHLYENHSHFCDVEMSLNTCFCDEENCDSKKLCEQEFTRRNLKKTEFKKENFCL
                     KFSKENNA"
     gene            complement(3618..>3966)
                     /locus_tag="RJ318_001579"
     CDS             complement(3618..>3966)
                     /locus_tag="RJ318_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HDV7431417.1"
                     /translation="LDSLNLQIASKLEKLKNREFVVYHPSWTYFAKRYNLTQIPVEIL
                     GKEPKSKDLQKLITLMKNKNLKIIFVQNGFPENAAKTLAKECDAKIYKIDHLSYDWEN
                     ELLKTADAFSHNL"
BASE COUNT         1511 a          536 c          600 g         1319 t
ORIGIN      
        1 cttacataat catcatagat gagattaatc gcggtaatgt gagtaagatt tttggtgagc
       61 ttataacctt gatagaagct agcaaaagga taggtgaaaa agaagagtta aaagtgactt
      121 tgccttatag tggcaaagaa tttggagtac ctaaaaatgt ttatatcata ggcactatga
      181 atacagccga tagaagcata acttctcttg atacagcttt aagaagaaga tttgaattta
      241 ttgagatgat gcctgatgtg agcaaattat ctatggattg tgaaggtatt aatttacaag
      301 aattattaaa agctataaac actcgtatag aatatttact agatagagaa aaaaccatag
      361 gtcatgcatt ttttataagt gttgaaaatt tagaagattt aaaaaaggtt tttaaaaata
      421 aaatcatccc acttttgcaa gagtattttt acaatgacta tgctttgatt gacgcagttt
      481 taaataaaaa tggtatgttg gaaattagtg ttgaaaataa agattattta aaaaatatga
      541 cagaatttat agaaagcgat aagattgttt ataaatttag tgatagtaat aattggagta
      601 aagatacttt tataaaaata tatgaataat gaaaacaagt aatacttttt ccatcatcga
      661 ataccaagct ttttctaaag aagatttaaa agaaattttc aaagaaaagg ccgaagggtt
      721 ttataaagag ctagaagact ttgcaaaaaa taatgaaaat cttctaggct ttaaaaacaa
      781 aaattcctta aaagctaaaa attatgtcgg cattatacag actaaaagcg gggttttgga
      841 gattttgcca aaatgcacga atttagatag ttataaaaaa gaagatagtt cttcaaatca
      901 tgacaaagaa aagctaagaa gatgttatga attagacaat atttctaaaa ataatgattt
      961 ttatgaaaaa gattttaaat ttaatcctaa aaatcttttg ataaatatgc taaaaacctt
     1021 aaaaaactcc ccctttaaaa aatcgcaaat ttcatctttg caaagttcta aaattccttt
     1081 atttgaagtg tttatcacta tgtttttaga tgaatttgat agcgtgtata aaaaaggctt
     1141 gatgagatct tatctaagtt gcgaagaaaa tagggctttt ttgaagggaa aattactatt
     1201 taacgagcat atcaagcaaa atttaataca caaagaaaga ttttttacaa gcaatgatga
     1261 gtttgtttta gatatagcac ccaatcgttt gataaaatca acgctaaatt ttttaaaatc
     1321 aaaaacaagt ttgaataaat ttagacttat aaaagccatg caaatgcttg atgaggtaga
     1381 attttctaaa aattatgaaa aagattttag ttataaaatt tcaagacatt ttgattatta
     1441 tgaaagcttg cttttgtggt gtaaaatttt cttaaaaaat gaaagtttta tgccttatca
     1501 tggtaaaaat gaagcttttg ctttgctttt tcctatggag aaaatttttg aagattatgt
     1561 agcttatatg ttaaaaaaag taaatccagc tcaagatatt aaagtccaaa acgatggaaa
     1621 gtatttaatc tcaaaaaatg atgaaaaatg ttttatgtta aagcctgatt tatatataga
     1681 aaataaaatg atcctagata ccaaatggaa aattccaaat gatagtgaag atgagaaaaa
     1741 acagggtata gaacaaagcg atttgtatca aatgtttgct tatgcttgca aatttaaaat
     1801 ttatgatatt aaacttgtgt atcctttatg tgaaaaaact caagatttac aaagaaaaat
     1861 cgcagaaaaa ttttttgttt ttaaggcaag cgaacatttg tattttaaag aacaagggca
     1921 aaaagatata aaagtgcaag tgttttttgc acctttacct ttttaaaaat ttttctatca
     1981 aatgcactaa aaaaccaaag caagctacag ctatgatgca agcaccgctt gagagattaa
     2041 gataataact aagtataagt cctaaaacac aaaaaatcat acttaaaaaa cttgccaaaa
     2101 tcatgataaa gccaagtctt ttagtaaaat tttcagcaat aaaacttggg atactaagta
     2161 aagccataac taaaataagc cctacaaggc gtatagaaat aactatacaa aaagccataa
     2221 gggcgattaa aagataatga aaaaaacttg tattgatacc acgaactttt gcaaattccg
     2281 catcaaagct taatgcttca aattgtctat aaaataaaaa gatcaaaagt accaccacgc
     2341 tatcaaccaa agccataagc cataaatctt gtgttcctac agccaaaatg ctcccaaaaa
     2401 gataagccat taaatctgtg ttataactag ggcttaaatc gattaaaata atcccaacag
     2461 ccattccaaa agcccagatt acagcgataa tgctatcact tctgtgttca tagcgtttag
     2521 ctaaaaaagc tactaaaaaa gccaaaaata aagtaaatat tcccgtgctt aataaaatgg
     2581 gcaaagagaa ataaaaagct atacctatac caccaaaagc cccatgtgtt atacctccag
     2641 ccatagaaaa aaggcgattt atcatcacca aagtgcctat gatcccacaa gctatactga
     2701 ctaaaatcgc tcctagtaaa gcgttttgaa aaaaggtgaa atttaaaatt tcaagcatta
     2761 ttttcctttg aaaattttaa acaaaaattt tcttttttaa attctgtttt tttcaaattt
     2821 cttcttgtaa attcttgttc gcatagtttt ttactatcgc aattttcttc atcgcaaaaa
     2881 caagtattta aactcatttc tacatcacaa aaatgagagt ggttttcgta taaatgtttt
     2941 aaaaatgaac ttttttcttt ttctttagtg ttggtatgca agaaaagttc tttgtttaaa
     3001 tgtgcaattt tatcgctata agctaataca aggttgatat cgtgacaaat gagtaaaatt
     3061 cccatgcctt tttggtgcaa ggagcttaga agttcaaaaa tttgtatagc ggacttgtta
     3121 tcaacgcttg cggtaggttc atctaaaata agcattttgc attcactagc taaggctctt
     3181 gcgataaaaa cacgttgcct ttgtcctccg cttagagaat caatggtttt gttccaaaat
     3241 ttttccattc ctacactttt taaagcttgc atagcttttt ctttatcttt tttcccataa
     3301 aaaccaaaaa tttttttact tacaagtccc ataagaacga tttcaagtac tcttgggcaa
     3361 aaattaggat tggctagagt gtgttgagga acatagccta tttcttttct ttgaagagct
     3421 ttgaaatgga tttcattttt ggattttaaa agtcctaaga taagttttac gagtgttgat
     3481 tttcctgcac catttggacc tatgatagag agaaagtctt tattgtcata gctaagattg
     3541 atgtttttta agatgatttc attatcataa gcgtagttta gattggaaat ttcaaaaaaa
     3601 agcatcaaaa aacctgatta taaattatga gaaaaggcat cagcagtttt taaaagctca
     3661 ttttcccaat cataagataa atgatctatt ttgtaaattt ttgcatcaca ttctttagca
     3721 agtgtttttg ctgcattttc agggaaacca ttttgaacaa aaatgatttt taaattttta
     3781 tttttcatta gagtgataag tttttgcaaa tctttgcttt ttggttcctt gcctaaaatt
     3841 tctacaggaa tttgcgtaag attatagcgt tttgcaaaat atgtccaaga aggatgataa
     3901 actacaaatt ctctattttt taatttttct aattttgagg caatttgtaa atttaaacta
     3961 tctaat
//
LOCUS       DAPIYB010000105         3808 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.106, whole genome shotgun sequence.
ACCESSION   DAPIYB010000105 DAPIYB010000000
VERSION     DAPIYB010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3808)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3808)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3808
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.106"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..866
                     /locus_tag="RJ318_001580"
     CDS             <1..866
                     /locus_tag="RJ318_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDV7431418.1"
                     /translation="EIFLDLLNTQSPTHTANNFSITQPNVSIVIKNLENKFDGILFER
                     LGKKLLPTPKALELGKNWLKIIQAYYQSLEKLNDESMLLGEIKIASTQSISEHFLAPI
                     LFDFKAEFKNIEIRSQTQNSKECLNLLKNGNIEFAIIEAELDPALVEYENLEINFWQD
                     DELIVATSDKKLNEKEFYIDELLEQKWILREVGSGLRDKFLNEIGASSKKLNIFLELD
                     RMAAIKELVLQKKAISIFSKKSIEKELKNSTLYEIKLKNIDLKRKFYTLKRKNYNFNR
                     ALEKFEKIFKS"
     gene            946..2814
                     /gene="rpoD"
                     /locus_tag="RJ318_001581"
     CDS             946..2814
                     /gene="rpoD"
                     /locus_tag="RJ318_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDV7431419.1"
                     /translation="MNAKTQEAELEELFQENAKDYITYEKLVKYLTKQPSASTTKKVQ
                     ALMKKHKVQLFSAAEIAQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRS
                     DSPVRMYLREMGQIALLNKDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLI
                     NRERRVKELFKSFDDEEKSDDKLDELDIDEDEENETELESDEENTKKNSKKEDERTLK
                     VIEKFKALEKAKKDWLKTSKDKESGDELLDKLSIAFKKNILKEKLMDLGPTSKLISEI
                     VKSMETALKSDEEFDKELKRLEYRLPMFSDELKKRHADILKDITKLSKEEITERALET
                     TMVSTYMEIKKLFQTKEASEKSFDLEKSRLKEILEQIKRGKKISDEAKGRMAKSNLRL
                     VVSIAKRYTNRGLPFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAISRAIA
                     DQARTIRIPIHMIETINQINKIIREHLQKDGKEPDVSVIAKEVGLSVDKVKQVIKITK
                     EPISLEAPIGNEDDGKFGDFVEDRNSLSPMDHILKDDLKEQIDEVLDQLNDREKAVIR
                     MRFGLMDDESDRTLEEIGKELNVTRERVRQIESSAIKKLKHPKVGRKLKNYIEGWK"
     gene            complement(2830..3342)
                     /locus_tag="RJ318_001582"
     CDS             complement(2830..3342)
                     /locus_tag="RJ318_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDV7431420.1"
                     /translation="MKKIYIIRHAKASKSEDIDDFERKLTKSGKEDLKKLFKNLASHE
                     IHPDLVLSSPAVRTAKTAKKIAKFYNFDKNRICFDERLYLCNVENLLKILQDIDDEFN
                     EVFLVGHNPSLMELGELLSSLCLASFPTSSILCLEFDIKEFKNLKKHSGKLVFFEHVR
                     KLKEEKDLGF"
     gene            complement(3339..>3808)
                     /locus_tag="RJ318_001583"
     CDS             complement(3339..>3808)
                     /locus_tag="RJ318_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDV7431421.1"
                     /translation="SYDYYNILGLNILFFNGAYWQLLSSMFLHGNLTHLILNMIVLFQ
                     FGRMLETYLGALCFIFIYFIGGLLCSLLSVFYVYFDFKYFGENINVIGASGAICVLMG
                     FYAVIDKNSTKGLIVAILLMSFVPLLMGVNVAWYGHIFGFMCGYILAKIKEVK"
BASE COUNT         1636 a          554 c          545 g         1073 t
ORIGIN      
        1 tagaaatatt tttagatctt ttaaacactc aaagtccaac tcatacagcc aacaattttt
       61 ccataactca acctaatgtt tcaatagtaa ttaaaaattt agaaaataaa tttgatggca
      121 ttttatttga aagacttgga aaaaaactct tacctacacc aaaagcttta gaactaggaa
      181 aaaattggtt aaaaattata caagcctact accaaagctt agaaaaatta aacgacgaaa
      241 gtatgctctt aggggaaata aaaatagcct caactcaaag catttctgaa cattttttag
      301 ctcctatttt atttgatttt aaggcagaat ttaaaaacat agaaattcgc tctcaaacgc
      361 agaattcaaa agaatgttta aatttactaa aaaacggaaa tatagaattt gcaatcattg
      421 aagcagaact tgatccagct ttagtggagt atgaaaattt agaaataaat ttttggcaag
      481 atgatgaact tatagtagct acaagtgata aaaaactcaa tgaaaaagaa ttttatatcg
      541 atgaactttt ggaacaaaag tggattttaa gagaagtagg ctcaggctta agggataaat
      601 ttttaaacga aattggtgca agctcaaaaa aacttaatat ttttcttgaa cttgatagaa
      661 tggctgcgat taaagaactt gttttacaaa aaaaagcaat ctctattttt tccaaaaaaa
      721 gcatagaaaa agaattaaaa aattcaacac tttatgaaat taaattaaaa aatatcgacc
      781 taaagcgtaa attttatacc ttaaaaagaa aaaattataa ttttaacaga gctttagaaa
      841 aatttgaaaa aatattcaaa tcataaacat aataaccgat ttatatagaa agttaagcaa
      901 tttttagata aaatccaaag cttatataaa tttcaaggat aatcaatgaa cgccaaaact
      961 caagaagctg aattagaaga attatttcaa gaaaatgcaa aagattatat cacatatgaa
     1021 aaattggtaa aatatcttac aaaacaacca agtgcatcaa ccactaaaaa agtgcaagca
     1081 ttaatgaaaa aacacaaagt gcaacttttt tcagcagctg aaattgcaca aatgaaaaac
     1141 atagaagatg caaaaagact tcaagaagaa aaacaaaaac tccaagatac aagccttgag
     1201 aacgaatttg atttagccaa tgaaaacgat ttattagaat ggagcagatc agactctcct
     1261 gttcgtatgt atttaagaga aatgggacaa attgctttat taaacaaaga tgaagaaatt
     1321 gaaatttcca aaaaaataga acttggcgaa gatattatca ttgatgcttt ttgttctgta
     1381 ccttatttga tagattttat tttagattat aaagaacctt taataaacag agaaagaagg
     1441 gtaaaagaac tatttaaaag ctttgacgat gaagaaaaaa gtgatgacaa acttgatgaa
     1501 cttgatatag atgaagatga agaaaacgaa acagaattag aatcagatga agaaaatact
     1561 aaaaaaaaca gcaaaaaaga agatgaaaga actttaaaag ttatagaaaa atttaaagct
     1621 ctagaaaaag ctaaaaaaga ttggctaaaa acatccaaag acaaagaaag cggagatgaa
     1681 cttttagata aattaagcat tgcgttcaaa aaaaatattt taaaagaaaa attaatggat
     1741 ctaggcccta cttcaaaact tattagcgaa atcgtaaaat caatggaaac tgcactaaaa
     1801 agtgatgaag aatttgacaa agaacttaag cgtttagaat accgcttacc tatgttttct
     1861 gatgaactta aaaaacgcca tgcagatatt ttaaaagata ttacaaaatt gagcaaagaa
     1921 gaaatcacag agcgagcttt agaaacaacc atggtaagca cttatatgga aattaaaaaa
     1981 ctatttcaaa ctaaagaagc cagtgaaaaa agctttgatc ttgaaaaatc acgcttaaaa
     2041 gaaattttgg agcaaattaa acgcggtaaa aaaatctctg atgaagcaaa aggaagaatg
     2101 gcaaaatcaa acttgcgcct tgttgtaagc atagctaaac gctacacaaa tcgtggtctg
     2161 cctttcttag accttatcca agaaggaaat ataggtttga tgaaagctgt ggataaattt
     2221 gaatacaaaa ggggttataa attttccact tatgcaactt ggtggatcag gcaagctatt
     2281 tcaagggcta tagctgatca agcaagaacc ataagaattc caatccatat gatagaaacc
     2341 atcaatcaaa ttaacaaaat tatccgcgaa catctacaaa aagatggaaa agaacctgat
     2401 gtcagtgtta tagctaaaga agtaggttta agcgtagata aggttaaaca agttattaaa
     2461 atcacaaaag aaccaatttc tcttgaagct ccaataggaa atgaagatga tggtaaattt
     2521 ggagattttg ttgaagatag aaattcactt tctccaatgg atcatatctt aaaggatgat
     2581 ttaaaagaac aaattgatga agttttagat caattaaacg atagagaaaa agcggtaatt
     2641 cgtatgcgtt ttggtttaat ggatgatgaa agtgatagaa ctttagagga aattggaaag
     2701 gaacttaatg tcactcgaga aagagtgaga caaatagaaa gctcagctat aaaaaaactc
     2761 aaacacccta aagtaggaag aaaactaaaa aattatatag aaggttggaa gtaagagtca
     2821 atctccttac taaaaaccca gatctttttc ttcttttaac ttgcgtacat gttcaaaaaa
     2881 aactaatttt ccgctatgtt tttttaaatt tttaaattcc ttaatatcaa attctaaaca
     2941 caagatagaa gaagttggaa aagaagctaa acatagcgaa cttaataact ctccaagctc
     3001 cattaaacta ggattatgac ccactaaaaa tacttcatta aactcatcat caatatcttg
     3061 cagaattttt agcaaatttt caacattgca aagatacaat ctttcatcaa aacaaattct
     3121 atttttatca aaattataaa atttggctat ttttttcgct gttttagcgg ttctaacagc
     3181 aggacttgat agcaccaaat caggatgaat ttcatgcgaa gcaagatttt taaaaagttt
     3241 ttttaaatct tcctttccac tcttagtaag ttttctttca aaatcatcga tgtcttcact
     3301 cttacttgct tttgcatgtc ttataatata aatttttttc attttacctc ttttatttta
     3361 gctaaaatat aaccacacat aaacccgaaa atatgaccat accaagcaac atttaccccc
     3421 ataagcaatg gcacaaaact cataagtaaa attgccacta taagtccttt tgtgctattt
     3481 ttatcaataa cagcataaaa gcccattaaa acacaaattg caccactagc gcctatgaca
     3541 tttatatttt ctccaaaata tttaaaatca aaatacacat aaaaaacact taaaagtgag
     3601 cacaacaatc cgccaataaa ataaataaaa ataaaacaca aagcacccaa ataagtttct
     3661 aacatacgcc caaattgaaa caaaactatc atatttaata taagatgagt taaatttcca
     3721 tgtaaaaaca ttgaacttaa aagctgccaa taagctccat taaaaaataa aatattcaaa
     3781 ccaaggatat tgtaataatc ataagaaa
//
LOCUS       DAPIYB010000106         3772 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.107, whole genome shotgun sequence.
ACCESSION   DAPIYB010000106 DAPIYB010000000
VERSION     DAPIYB010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3772
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.107"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..961)
                     /gene="selD"
                     /locus_tag="RJ318_001584"
     CDS             complement(<1..961)
                     /gene="selD"
                     /locus_tag="RJ318_001584"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011049992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(911..913),aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDV7431422.1"
                     /translation="MQYKNQNLTHFVKAAGUAAKLSPGGLKTILNFMQKTPALLSDIG
                     NNEDASVYQISPDLALVQTLDFITPIVDSAYHFGAIAAANALSDVFAMGAEVINALNI
                     VGFDTCNHDLNILKELLEGANDKVKECNALVVGGHTIESTELFFGLSVTGKVHPSKFI
                     ANNTSKIGDCIILTKPLGTGILSTALKAQMLNQKHLDIMLKNMIELNYKASQIALKFH
                     PSAMSDVTGFGLLGHLKEMLNKNISFEIFESELPFLDGVKEYFNMGLIPAGAYKNLEF
                     IKELTPDLNEEKLLLCDPQTSGGLLISISEKDSLECLKKLEDEN"
     gene            complement(971..1543)
                     /gene="yedF"
                     /locus_tag="RJ318_001585"
     CDS             complement(971..1543)
                     /gene="yedF"
                     /locus_tag="RJ318_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDV7431423.1"
                     /translation="MKIDCRNLSCPQPIVETKNALEKLQENEILEIVLNSIISKNNVV
                     KFLNSLNLNPVVDENAQEFCIKVQKKNFDSSEVNIHDYNVLFLKTDKVGEGELGQNLL
                     VGFLSTLKNLDHAPSKILCVNESVLINVDENHKAHLAMKELENLGIEIISCGACLEFF
                     NKSKELKIGNIGNAYEILNELFGKAKIITL"
     gene            complement(1654..3756)
                     /gene="ccaA"
                     /locus_tag="RJ318_001586"
     CDS             complement(1654..3756)
                     /gene="ccaA"
                     /locus_tag="RJ318_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate chemotaxis receptor CcaA"
                     /protein_id="HDV7431424.1"
                     /translation="MFKSLNIGLKLIFSVAAVVVIGLVILISLITKQVSQNITKNTED
                     ILASITKEYATQTQGIFGEMIALNKSISGTLTEMFRSTSKEDLDIDNITNIITNTFDN
                     SAYSNFTYLYLIDPPEYFKEESKFFNTQSGKFVMLYADEEKDNKGGIKAIQASDEIAN
                     LQVVQDILKKAKYGENKVYIGRPIKMNLEGQDFDAVNVAIPIFDRKNQVVGVIGMTLD
                     FSDIATYLLDPKGQKYDGELRVLLNSDGFMAIHPNKNLVLKNLKDINPNKGAQETYKA
                     ISEGKNGVFNYIASDGDDSYAAINSFKVQDSSWAVLVTAPKYSVFKPLKKLQLIILGA
                     SFIFIFVVLGVVYYCVRKIVASRLPVILSSLESFFRFLNHEKIEPKAIEIRANDELGA
                     MGRIINENIEKIQISLEQDQNAVDESVQTAREIEKGNLTARITKNPINPQLVELKDVL
                     NRMLDVLQSKIGSNMNEINRVFDSYKALDFSTEVFNAKGEVEITTNILGKEIKKMLLA
                     SSNFAKDLANQSEELKNSMQKLADGSNAQASSLEQSAAAVEEINSSMQNVSGKTVEVA
                     SQADDIKNIVNVIKDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRQLAERTGKS
                     LSEIEANINILVQSVNEVAESVKEQTAGITQINDAIAQLETVTKENVEVANVTNNITN
                     EVNQIAAAILEDVNKKRF"
BASE COUNT         1246 a          649 c          460 g         1417 t
ORIGIN      
        1 tattttcatc ttctagtttt tttaaacatt ctaaggaatc tttttcactt atagaaatta
       61 aaagtcctcc tgaagtttgt ggatcacaaa gtaataattt ttcttcattt aaatcagggg
      121 taagttcttt tataaattct aaatttttat aagctccagc aggaattaaa cccatattaa
      181 aatactcttt tactccatct aaaaaaggaa gttcactttc aaaaatttca aaagaaatat
      241 ttttatttag catttctttt aaatgtccta aaagtccaaa acctgtaaca tcactcatgg
      301 cacttggatg aaatttaaga gcaatttgac tggctttata atttaactct atcatgtttt
      361 taagcattat atctaaatgt ttttgattta acatttgcgc ctttaaagct gtacttaaaa
      421 ttcctgttcc taaaggcttg gttaaaatga tacaatctcc gattttagaa gtattattag
      481 caataaattt actaggatgt acttttcctg taacactaag tccaaaaaaa agctcggtgc
      541 tttctatagt atggccaccc acgactaaag cattacattc tttaacttta tcatttgcac
      601 cttctaaaag ctcttttaag atgtttaaat catgattgca agtatcaaaa cctactatat
      661 ttaaggcatt aattacctct gcacccatag caaaaacatc gcttaaagca tttgctgcag
      721 caatagcacc aaaatgataa gcactatcta ctataggagt gataaaatca agcgtttgca
      781 ccaaagctaa atcggggctg atttgatata cgcttgcatc ttcattattt ccgatatcac
      841 taagtaaagc aggagttttt tgcatgaaat ttaaaattgt tttaagacca cccgggctta
      901 attttgctgc tcagcctgct gctttaacaa aatgcgttaa attttgattt ttatattgca
      961 gtgtttttcc ttatagagta atgatttttg ctttaccaaa aagctcgttt aaaatttcat
     1021 aagcattgcc tatatttcct attttaagtt ctttgctttt attaaaaaat tctagacaag
     1081 ctccacaact tatgatctca atacctaaat tttcaagttc tttcatagct aaatgtgctt
     1141 tatgattttc atcaacattg attaaaacac tttcatttac gcaaagaatt ttacttggag
     1201 catgatctaa attttttaag gtacttaaaa atcctacaag taaattttgt cccaattcac
     1261 cctcacccac tttgtcggtt tttaaaaata aaacattata atcgtgaata tttacttcac
     1321 tagaatcaaa attctttttt tgtactttga tgcaaaactc ttgtgcattt tcatctacaa
     1381 cagggtttaa atttaaagag ttaagaaatt ttacaacatt attttttgaa ataatagaat
     1441 ttaaaacaat ttctaaaatt tcattttctt gaagtttttc aagagcgttt tttgtttcaa
     1501 ctataggctg aggacaagat agattgcgac aatcaatttt cattattttt ccttgatatt
     1561 agctttgaaa aataatatta ttttattact tgttttgtgt ttaaaaattt taaataatat
     1621 agaaaaaatt taaaagctca aaaatgagct tttttaaaat ctttttttat tcacatcttc
     1681 aagaattgcc gcagcaattt gattgacttc atttgttata ttattggtga catttgcaac
     1741 ttcgacattt tccttagtta cagtttcaag ttgtgctata gcatcgttaa tctgtgtgat
     1801 tcctgctgtt tgttctttta cagattctgc tacttcattt acgctttgaa caagtatatt
     1861 aatatttgcc tcgatttcag ataaggattt tcctgttctt tccgcaagct gtcttacctc
     1921 atctgcaaca actgcaaaac cacgcccatg ttctccagca cgtgcagctt caatagctgc
     1981 atttaaagca agaagattcg tttgctcagc gatatcttta atcacattga caatattttt
     2041 tatatcatca gcttgtgaag caacctcaac tgtttttcca cttacatttt gcatagaaga
     2101 attaatctcc tccacagctg cagccgattg ttctaaagaa ctcgcttgtg cattagagcc
     2161 atcagcaagt ttttgcatag aattttttaa ctcttctgac tgattggcta aatctttagc
     2221 aaaatttgaa gaagccaaaa gcatcttttt aatttctttg cctaaaatat tagttgtaat
     2281 ctcaacttca cctttagcat taaatacttc tgtactaaaa tcaagagcct tataactatc
     2341 aaaaactcta ttaatttcat tcatattaga accaatttta ctttgtaaaa catcaagcat
     2401 cctattaaga acatctttaa gttctactaa ttgaggattt ataggatttt tagtaattct
     2461 tgcagttaaa ttaccctttt cgatttctct agcagtttgc accgattcat ctacagcatt
     2521 ttgatcttgt tctaaagata tttgaatctt ttcaatattt tcatttatga ttcttcccat
     2581 tgctcctagc tcatcattag cacgaatttc aatagcctta ggttcaattt tttcatgatt
     2641 taaaaaacgg aaaaatgatt ctaaagaact aagaatcaca ggcaatctag atgcgacaat
     2701 ttttcttacg caataataaa ccactcctaa aacaacaaaa ataaaaataa aagatgcacc
     2761 aagaataatt aattgtaatt tttttaaggg tttaaatact gaatatttag gagcagttac
     2821 caaaactgcc caagaactat cttgcacttt aaaactatta atcgcagcat aagaatcatc
     2881 accatcagaa gctatatagt taaaaactcc attttttcct tcacttatgg ccttataagt
     2941 ttcttgtgca cctttattag gattgatatc ttttaaattt tttaaaacta gatttttatt
     3001 tggatgtatc gccataaaac catctgaatt taaaagaact cttaattcac catcatattt
     3061 ttgaccttta gggtctaaaa gataagtagc aatatctgaa aaatctaaag tcatgcctat
     3121 gacacctaca acttgatttt ttcgatcaaa aataggtata gcaacattta cagcatcaaa
     3181 atcttgacct tctaaattca tcttaatagg acggcctata tatactttat tttccccata
     3241 ttttgctttt tttaatatat cttgcacaac ttgcagatta gctatttcat cactagcttg
     3301 tattgctttt attccgcctt tattatcctt ttcttcatca gcgtaaagca taacaaattt
     3361 tccactttga gtattaaaaa atttactctc ttctttaaag tattctggcg gatcaataag
     3421 atataaataa gtaaaattag aataagcact attatcaaaa gtattggtta taatatttgt
     3481 tatattgtct atatctaaat cttctttaga ggttgatcta aacatttctg ttaaagtacc
     3541 tgaaatactt ttatttaaag cgatcatttc cccaaaaatt ccttgagttt gagtagcata
     3601 ttctttcgtg atagaagcaa gaatatcttc tgtatttttg gtaatatttt gacttacttg
     3661 ttttgtgatt aatgaaatta aaataacaag tccaataaca acaacagctg ccacagaaaa
     3721 aataagtttt aaacctatat ttaaagattt aaacatctta taactcctaa aa
//
LOCUS       DAPIYB010000107         3643 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.108, whole genome shotgun sequence.
ACCESSION   DAPIYB010000107 DAPIYB010000000
VERSION     DAPIYB010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3643
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.108"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            41..682
                     /locus_tag="RJ318_001587"
     CDS             41..682
                     /locus_tag="RJ318_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004087550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDV7431425.1"
                     /translation="MYDINFNELPNSFVLKTNHDCGGYVIVENKQEFLRDTVVFSNAM
                     KKLKKHLEWNYYSVFREWHYKDIEPRVFAEELLLGENKKPADTYKFHIFDKENLSNNF
                     IQVTTDRFDNYQRAMFDLSWNLAPFNFMYDNKNVTMIPKKPNLLDSMINISLILAKPF
                     DYVRVDLYQFDKKIYIGELTFTHGAAGEKVIPKEWDKKLGDLWRLKRLDNASK"
     gene            669..1774
                     /locus_tag="RJ318_001588"
                     /pseudo
     CDS             669..1774
                     /locus_tag="RJ318_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344820.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate aminotransferase family
                     protein"
     gene            1824..2996
                     /locus_tag="RJ318_001589"
     CDS             1824..2996
                     /locus_tag="RJ318_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate aminotransferase family
                     protein"
                     /protein_id="HDV7431426.1"
                     /translation="MLIKLNDYEKNITQKIKDLKNASGSHSPSIFTMAEQIPELNIKI
                     DSCFLSNPYATALFLRYLKEELIDGQKLRSVLEFYPSQNSIIAKTVADFIGIDPKNVF
                     IGNGAIEIIQAVMHNFVGKKIIVNIPTFSSYYEFAKSETNVVYYQLSKEDNYNLNIEH
                     YLNFVKNENPDSVVLINPNNPDGGYINYEKLRYILSELKYVKNIIIDESFIHFAYENK
                     DYNGINIEYLFKEFHNTIIIKSMSKDFGVAGIRIGYAIMSEDKIRGLLKNGYLWNSSG
                     LSEYFLRLYVRKNFFDEYDKVRREYIQETQTFFRKLSGIKQFKVYPSMANFALVELLD
                     GSSSTDFVAKMLIKYGIYMRTCNDKIGLEGEFIRIASRTLEENDMVLKSICDVFKE"
     gene            3000..3635
                     /locus_tag="RJ318_001590"
     CDS             3000..3635
                     /locus_tag="RJ318_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IB family hydrolase"
                     /protein_id="HDV7431427.1"
                     /translation="MSKEILALFDFCETLTNFQTLDRYLPLAGSKNINYTQSKNLARR
                     ERFQRENLPYPRYEWLIDLDVDLAEEIAQEFVYTDVMANLNQNVMDRLFWHQDEGHTI
                     VIVSGGLTIYIKEFARIYNIENIVAVDLEIYKNKLTGNIDGIHTMQERKLYKLAQKFN
                     LKQFDLKNSYAYSDCVSDIPLLSLVGNPNVIECGKDLQWARILGFNILLKY"
BASE COUNT         1328 a          367 c          623 g         1325 t
ORIGIN      
        1 atgcaaatat cttccaaaaa tatatgggat atataaaaat atatatgata ttaatttcaa
       61 cgaattacct aattcttttg ttttaaaaac taatcatgat tgtggaggtt atgttatagt
      121 tgaaaataaa caagaatttt tacgagatac tgttgttttt tcaaatgcta tgaaaaaatt
      181 aaaaaaacat ttggaatgga attattatag tgtatttaga gaatggcatt ataaggatat
      241 agagcctaga gtctttgcag aagaattatt gttgggagaa aataagaaac cagcagatac
      301 atataaattt catatttttg acaaagaaaa tttatctaac aattttatac aagttacaac
      361 agacagattt gataattatc aaagggctat gtttgattta tcatggaatt tagcaccttt
      421 taattttatg tatgataata aaaatgttac aatgattcct aaaaaaccta atcttttgga
      481 ttctatgata aatatttctt tgattcttgc aaaacctttt gattatgtta gagtcgattt
      541 atatcagttt gataagaaaa tttatattgg ggaattaact tttactcatg gtgcagctgg
      601 tgaaaaagtt attcctaaag agtgggataa gaaattgggg gatttgtggc gtttgaaaag
      661 gttggataat gcaagcaaat aaaaatattc aaaaacttac tccttattta tctattccac
      721 acaaaatatg gaattcgagt caatcaaata ttttgaaact tgattggaat gaggctacga
      781 ttccgccatc tccttatgtt atagaaagca ttaaaaaatt tttagttaat ggaaatttaa
      841 actggtatcc gaatacaaaa aatttatatt tattggataa aatagcagaa tataccaaac
      901 agataaatag ttcttttgtt gagttgtttg aaggatccga ttctgctcat gaatgcatca
      961 tcgatgtgtt tttagataaa tgtgataaaa tcggaattgt ttcccctact tatgataatt
     1021 ttagatctag agctaatggg gtaggtattg aaactatttc atttacactt gatgataatt
     1081 ttaatttaga ttttgatagt ttagaatatt ttatacatga aaagagaata aaacttttat
     1141 atttatgtaa tccgaataat ccaaccggga aatcttataa tattcaaaaa attaagtctc
     1201 taattattaa taatcctaat gtaatgttta ttattgatga agcctattat gaatttacta
     1261 gccagagtgt atgtgatttg gttgaacaat gtaataattt aattataact cgaacatttt
     1321 ctaaggcttt tgcattggcg agttttagga taggatatat aatttcacat ccagaaaata
     1381 tagaatcaat aaataaatta agaaatccaa aaagtgttcc tatgctatct caaattgcag
     1441 ctaatgcagc attggaggat ttacaatata tgagagatta tgtagatgaa gtgagttgtg
     1501 ctaggatgga atttgtgaaa tttttgaata ccttaactac tggcgggggg gggggatatt
     1561 caatgattct gtagcaaatt tcgttttgat tcaaaatgag aatatatctc tttttgtagg
     1621 gtttttggaa aaagagggta tttttattcg caactattct catcttattt ctaaaaattg
     1681 tcgtattagt ataggtacaa gaaatcaaat gagttatgtt gctgaaaaaa tacaagaatt
     1741 tgctaaaaaa caaggaggtt ttcaccttgt ttgatgcaat tatagtaaga attattttta
     1801 cttttgtatt cttcaaggat ttgatgttga taaaacttaa tgattatgaa aaaaatatta
     1861 cgcaaaagat aaaagatttg aaaaatgctt ctggtagtca tagtccgagt atttttacca
     1921 tggctgagca aataccggaa ttaaatataa aaattgattc ttgtttttta tctaatccct
     1981 atgcgacagc tcttttttta agatatttaa aagaggagtt aatagatggt caaaaactaa
     2041 ggtcagtttt ggaattttat ccttctcaaa atagtataat tgccaaaact gttgcagatt
     2101 ttataggaat tgatcctaaa aatgttttta ttggaaatgg tgctatagag attattcaag
     2161 ctgtaatgca taattttgta ggtaaaaaga tcattgttaa tattcctact ttttcatctt
     2221 attatgaatt tgctaagtct gaaacaaatg ttgtttatta tcaactttct aaagaagata
     2281 attataactt gaatatagaa cactatctta actttgttaa aaatgaaaat ccagatagtg
     2341 tagttttaat aaatcctaat aatccggatg gaggatatat taactatgag aaattaagat
     2401 acattttaag tgaattgaaa tatgttaaaa atattattat tgatgagtcc tttattcatt
     2461 ttgcttatga aaataaggat tataatggga ttaatattga gtatcttttt aaagaatttc
     2521 ataatactat tattatcaaa agtatgtcta aagattttgg cgtagcaggg attagaatag
     2581 gttatgcaat tatgtcagaa gataagataa gaggtttatt gaaaaatgga tatttgtgga
     2641 attcttcggg acttagtgaa tattttttaa gattatatgt aagaaaaaac ttttttgatg
     2701 aatatgacaa ggttagaagg gaatatatac aagaaactca gacttttttt agaaagttaa
     2761 gtggaattaa acaatttaag gtttatccta gtatggctaa ttttgctctt gtggagcttt
     2821 tggatggtag ttctagtaca gattttgttg ctaaaatgct gattaaatat ggtatttata
     2881 tgagaacttg caatgataag ataggtttag aaggagaatt tattagaatt gcaagtcgaa
     2941 ctttagagga gaatgatatg gtattaaaat caatttgtga tgtttttaag gaataaaata
     3001 tgtctaagga aattttggcc ttatttgatt tttgtgaaac tttaactaat tttcaaacgc
     3061 ttgatagata tttgccttta gctggatcta aaaatattaa ttatacgcaa agtaaaaatt
     3121 tagcaagaag agaaaggttt caaagagaaa accttcctta tcctcgttat gaatggttaa
     3181 ttgatctcga tgttgatttg gcagaagaaa ttgctcaaga gtttgtttat actgatgtga
     3241 tggcaaatct taatcaaaat gttatggata gacttttttg gcatcaagat gaaggccaca
     3301 caatcgttat agtatcaggt ggtcttacga tttatattaa agaatttgct agaatttata
     3361 atattgagaa tattgtggcc gtagatcttg aaatttataa gaataaatta actggaaata
     3421 tagatggaat tcataccatg caagaaagaa aactttacaa attagctcaa aaatttaact
     3481 taaaacaatt tgatttaaaa aattcttatg cgtatagtga ttgtgtaagc gatatacctt
     3541 tattatcatt agttggaaat ccaaatgtta ttgaatgtgg taaagattta caatgggcta
     3601 gaattttagg ttttaatatt ttgttgaagt attaaattat aaa
//
LOCUS       DAPIYB010000108         3630 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.109, whole genome shotgun sequence.
ACCESSION   DAPIYB010000108 DAPIYB010000000
VERSION     DAPIYB010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3630
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.109"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..541
                     /locus_tag="RJ318_001591"
     CDS             <1..541
                     /locus_tag="RJ318_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HDV7431428.1"
                     /translation="KEKLIIFASTHKDEEELLLDHFKLEENEKLIIAPRHPERFKEVE
                     NLLLNKGLEFEKFSSLKDENKKFSKKILLLDALGELVNFYAISDVVVLGGSFIEGIGG
                     HNPIEAAYFDNVLISGKFIHNQKVLFEEVENVYFCEKLKDLNDKVHYLNLKAKISKKE
                     NLDLIIQTIQKGIDARKSL"
     gene            522..1274
                     /locus_tag="RJ318_001592"
     CDS             522..1274
                     /locus_tag="RJ318_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDV7431429.1"
                     /translation="MQEKAYKLLALQEKISNREAKDLIDKGCVFSYGKKVVVARALMS
                     DKARFNVIKAKNPQIIFEDDKIIAINKPYAYVSEDLEKKFNAKLLNRLDKETSGVILL
                     CKDEDFRKLCIEEFKKHRVYKSYIAVLDGVLAEEVEVNEPIFTIKVKGGALSKVSKDG
                     LSALSIITPIMMQSKKTLAKIVIQTGRTHQIRVHAKFIKHGVVGDEKYAKISSDRMYL
                     HSYEIKIFNYHFRANLDSGFAKFGFDIKNLDF"
     gene            1342..2679
                     /gene="ffh"
                     /locus_tag="RJ318_001593"
     CDS             1342..2679
                     /gene="ffh"
                     /locus_tag="RJ318_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDV7431430.1"
                     /translation="MFELVSESFKSAINKLRFVDDEKALKNALETLKKALLKADVHHK
                     VTKELLTLIEEDAKQNGIGQKQFLNAIKINLENILSVNGKNQGFVFASKPPTVVLMAG
                     LQGGGKTTSTIKLANYLKLRNKKVLVAACDLQRLAAVEQLRQLCEANEIELFFIENEK
                     DPIRVAKEALKKAESSMVDVLLVDTAGRLAIDEALMDELRAVKDVLNPDEIFYVADAM
                     SGQDGVKTAASFNEVLGISGVILSKFDADTKGGVALGIAKQIGIPLRFIGVGEKVADL
                     EVFIPDRIVSRIMGEGDLATLAEKTAAIIDEKEAKKLNQKIKKGEFNFNDFLNQMESI
                     KKLGSMKSLIGMIPGLGGMANAVKDIDLDNSKEIIRIKAMISSMTPKERENPDLLNNA
                     RKRRIAEGAGLSQVEVNRFLKQFSNAAKLAKRFSGKKGMESLTQMMSQARRQF"
     gene            2744..2971
                     /gene="rpsP"
                     /locus_tag="RJ318_001594"
     CDS             2744..2971
                     /gene="rpsP"
                     /locus_tag="RJ318_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDV7431431.1"
                     /translation="MTVIRLTRMGRTKRPFYRIVVTDSRKRRDGGWIESIGYYNPMVE
                     PEVIKVDAERLAYWKSVGAKLSDKVASITSK"
     gene            2974..3216
                     /locus_tag="RJ318_001595"
     CDS             2974..3216
                     /locus_tag="RJ318_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HDV7431432.1"
                     /translation="MVENFLREYAKLIADYPEQIDTQKIELSENFFEIVLFAHKVDTG
                     KLIGKNGKMINAIKTVISAYKSKDASSYRVTVKALE"
     gene            3209..>3630
                     /gene="rimM"
                     /locus_tag="RJ318_001596"
     CDS             3209..>3630
                     /gene="rimM"
                     /locus_tag="RJ318_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA processing protein RimM"
                     /protein_id="HDV7431433.1"
                     /translation="MSEKDFVQVAKLGKTVGLKGYVKLHNLSDFSSQFKKDATFFIKN
                     TKEMLKIKHYNANNSTVLFENYEDIEKAKELTNLILFQSIEKSRQTCKLKKDEFFYFD
                     ILECEVFEEDKRLGKVVDILETGASYLFEIQSDEKWVE"
BASE COUNT         1363 a          384 c          713 g         1170 t
ORIGIN      
        1 taaggaaaaa cttatcattt ttgccagtac gcataaagat gaagaagagc ttttgcttga
       61 tcattttaaa ctagaagaaa atgaaaaact cattatcgcc ccacgacacc ctgaacgttt
      121 taaagaagtt gaaaatttgc ttttaaacaa aggtttagaa tttgaaaaat ttagttcttt
      181 aaaagatgaa aataagaaat tttctaaaaa aattttgctt ttagatgctt taggggagct
      241 tgtaaatttt tatgcaattt ctgatgttgt tgtgcttgga ggttctttca tagaaggcat
      301 aggaggacac aatcctatag aagcggcata ttttgacaat gtattaatca gtgggaaatt
      361 tattcacaat caaaaggttt tgtttgaaga agtggaaaat gtatattttt gtgaaaaatt
      421 aaaggattta aatgataaag ttcattattt aaatttaaaa gctaaaattt ccaaaaaaga
      481 aaatttagat cttatcatac aaactataca aaagggaatt gatgcaagaa aaagcttata
      541 aactcttagc tttgcaagaa aaaatttcaa atcgtgaagc taaagatttg attgataagg
      601 gttgtgtttt ttcatatgga aaaaaagttg tggttgctag agctttgatg agcgataagg
      661 caagatttaa tgtgataaaa gctaaaaatc ctcaaattat ttttgaagat gataagatta
      721 ttgctattaa taaaccttat gcttatgtga gtgaagattt agagaaaaaa tttaatgcca
      781 agcttttaaa tcgtttagac aaagaaacaa gtggtgtgat tttgctttgt aaagatgaag
      841 attttagaaa gctttgtata gaagaattta aaaaacacag ggtttataaa agttatattg
      901 cggttttaga tggggttttg gctgaagagg ttgaagtgaa tgaacctatt tttactataa
      961 aagtaaaagg cggggcgtta agtaaagttt caaaagatgg tttaagtgcc ttaagtatca
     1021 ttactcctat catgatgcag tcaaaaaaaa ccttagcaaa aatagttatt caaacaggta
     1081 gaactcatca aatcagagtg catgctaaat ttataaaaca tggcgttgta ggtgatgaaa
     1141 aatatgctaa aatttcaagc gatagaatgt atttgcatag ctatgaaatt aaaattttta
     1201 attatcattt tagggctaat ttagatagtg gttttgcaaa atttggcttt gatataaaaa
     1261 atttagattt ttaaagccat ttaagaaaaa attttgtata atgcaaggtt taatttaaaa
     1321 attttataga aaggtgataa agtgtttgag ttagtcagcg aatcttttaa atcagcgatt
     1381 aataaattac gttttgttga tgatgaaaaa gcacttaaga acgctttaga aaccttaaaa
     1441 aaagctcttt taaaagcaga tgttcaccat aaggtaacta aagagctttt gactttgata
     1501 gaagaagatg caaagcaaaa cggaataggt caaaaacaat ttttaaatgc cattaaaata
     1561 aatttagaaa atattttaag tgtcaatggc aaaaatcaag gttttgtttt tgcttctaaa
     1621 cccccaacag tagttctaat ggcaggtttg caagggggcg gtaagactac aagcactatc
     1681 aaacttgcaa attatttaaa attacgcaat aaaaaagttt tagttgcagc ttgtgattta
     1741 cagcgtttag cggcagtgga gcagctaaga caactttgtg aagctaatga aattgaactt
     1801 ttcttcatag aaaatgaaaa agatcctatt agggttgcta aagaggcttt aaaaaaggct
     1861 gaaagttcta tggtggatgt tttgcttgtg gatactgctg gacgtttggc tatagatgaa
     1921 gctttgatgg atgagttaag agcagttaag gatgtcttaa atcctgatga gattttttat
     1981 gttgctgatg caatgagtgg tcaagatggg gttaagactg ctgctagttt taatgaagtt
     2041 ttaggtatca gtggggtaat tttatcaaaa tttgatgcag atactaaagg tggagtagcc
     2101 ttaggtatag caaaacaaat cggtattcct ttaagattta ttggtgtggg tgaaaaagta
     2161 gcagatttag aagtttttat accagatcgt atagtaagtc gtattatggg tgagggtgat
     2221 ttggcaactt tagctgaaaa aactgctgcg attattgatg aaaaagaggc taaaaaactc
     2281 aatcaaaaaa ttaaaaaagg tgaatttaat tttaatgatt ttcttaacca aatggaaagt
     2341 attaaaaaat taggaagtat gaagtcttta atcggtatga taccaggact tggtggaatg
     2401 gcaaatgcgg taaaagatat agatttggat aattctaaag aaatcatacg cattaaagca
     2461 atgatttctt caatgactcc aaaagaaaga gaaaatcctg atttattaaa taatgctaga
     2521 aagcgtcgta tagcagaggg agcaggtctt tctcaggtag aagtcaatcg ttttttaaaa
     2581 caatttagca atgcagcaaa acttgcaaaa agattttcag gtaaaaaagg aatggagagt
     2641 ttgacacaaa tgatgagtca agctagaaga cagttttaaa ttttatttat aaatactttt
     2701 tatagtatct ataaataaaa tttttaattt ttaaggagtg taaatgacag ttattagact
     2761 tacaagaatg ggtagaacca aaagaccatt ttatcgtatt gtagttacgg acagtagaaa
     2821 acgtcgtgat ggtggttgga tagaaagtat tgggtattat aatcctatgg tagaacctga
     2881 agtaattaaa gttgatgcag agcgtttagc ttattggaaa agcgttggtg caaaacttag
     2941 cgataaagtt gcttctatca ctagcaaata atcatggtag agaattttct tagagaatac
     3001 gcaaaattaa ttgcagatta tcctgaacag attgatactc aaaaaattga attaagtgaa
     3061 aatttttttg agattgttct ttttgcacat aaggttgata caggtaagct tataggtaaa
     3121 aatggaaaaa tgatcaatgc tataaaaacc gtaatctctg cttataagag caaggatgca
     3181 agttcttata gagtaacggt aaaagcactt gagtgaaaaa gattttgttc aagttgcaaa
     3241 acttggtaaa actgtgggtc ttaagggtta tgtaaaattg cataacctga gcgacttttc
     3301 ttctcaattt aaaaaagatg ctactttttt tataaaaaac accaaagaaa tgttaaagat
     3361 taagcattat aatgcaaaca attctactgt tttatttgaa aattatgaag atatagaaaa
     3421 ggccaaagaa ttaactaatc ttattctttt tcagagtatc gagaaaagca gacaaacttg
     3481 taaattaaaa aaagatgagt ttttttattt tgatatttta gagtgtgaag tttttgaaga
     3541 agataaaaga ttaggtaaag tggttgatat cttggaaact ggagcttctt atttatttga
     3601 aattcaaagt gatgaaaaat gggttgaaaa
//
LOCUS       DAPIYB010000109         3537 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.110, whole genome shotgun sequence.
ACCESSION   DAPIYB010000109 DAPIYB010000000
VERSION     DAPIYB010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3537
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.110"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            73..495
                     /gene="cgb"
                     /locus_tag="RJ318_001597"
     CDS             73..495
                     /gene="cgb"
                     /locus_tag="RJ318_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-domain globin Cgb"
                     /protein_id="HDV7431434.1"
                     /translation="MTKEQIQIIKDCVPILQKNGEDLTNEFYKIMFNDYPEVKPMFNM
                     EKQISGEQPKALAMAILMAAKNIENLENMRSFVDKVAITHVNLGVKEEHYPIVGACLL
                     KAIKNLLNPDEATLKAWEVAYGKIAKFYIDIEKKLYDK"
     gene            complement(515..2146)
                     /locus_tag="RJ318_001598"
     CDS             complement(515..2146)
                     /locus_tag="RJ318_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter permease/ATP-binding
                     protein"
                     /protein_id="HDV7431435.1"
                     /translation="MPFIMELLKQNKLKLISFLLFSFITSAVGVLTLVFINDYLLKNA
                     QNIPIFYFIVLLLIFFISSTIVELGLSIFGQNFIFKMQRRVVKQILDTPLLRVAKVGK
                     ARILASLGSDVRNISFGLLRLPDFLQSSILILCTSVYLCYLSPQIFALCVVWIMVIFI
                     TNNFLMMKVYQYFRKARENDDALQNNYQNILDGHKELLINRDRAKLYYEDEFENNARL
                     KKKNSTLGNLFNNLSNNWTNVTLLALVGVEFYLALKFEWASVADATTIALSILFLRTP
                     LVSMIGSFPTLLLAKIALDKIAKLELDDYIEGFKKTHYISEWKKISFRNTQFAYEENF
                     HLNPVNIELKKGELVFLIGKNGSGKSTFCMLLTGLFKPSKGGIYVDDTLIDDKNLDEY
                     RSLISAVFSDFHLFTKTLNKENFASEEKIAFWLEFLELKNKTSVKDNELTLTKLSTGQ
                     KKRLAMLIALLEERDILVLDEWAADQDPVFRRFFYKKLLPLLKEQGKTIFAITHDDAY
                     FDSADRIFLAQNGEISELKGENIKELAKNLVEKFD"
     gene            complement(2196..3491)
                     /locus_tag="RJ318_001599"
     CDS             complement(2196..3491)
                     /locus_tag="RJ318_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDV7431436.1"
                     /translation="MRKSKFGTKEIKILGLSSLGGTLEFYDFIIFVFFAEYIANVFFP
                     KDMSEFWALLNTYGAFAAGYLARPLGGIVMAHFGDKFGRKNMFMLSILLMVLPTFVLA
                     FIPGYETLGFLAPVLLILIRIFQGIAIGGELPGAWVFVREYCQEKQKAFFLSCLNSAM
                     ALGILLGSIVFLIINAFFSIEEIAAYGWRIAFFVGGIFGIISIYLRRFLQETPVFKQM
                     KKESSLSSFPLKDLFKEKDIVKNLFSSMMMTWVLTGCVIVLVLLMPKFMPSILNLSGV
                     EGSYLQILGILGIALGGAFMGYLVDKFGLFKICIFFSLTFVFFSFLYFYALYELKNLV
                     LVCILYSIICFLGGINVFAPILMSEVFRAKIRFSGISFSYNISYAISGGITPQLVFWL
                     NTLASKNENPFLYGMSIYMIFLALLAICAVFIVKDKIKF"
BASE COUNT         1419 a          597 c          403 g         1118 t
ORIGIN      
        1 ttttaacaca agtcaatttt tttctccttt ttaagatata aaatatctct tttacaacaa
       61 aaaggagaaa ctatgacaaa agaacaaatt caaatcatca aagattgtgt gcctattttg
      121 caaaaaaatg gagaggattt aaccaatgag ttttataaaa taatgtttaa tgattatcct
      181 gaggtaaaac ctatgtttaa tatggaaaaa caaatttcag gagaacaacc aaaagcttta
      241 gcaatggcga ttttaatggc ggctaaaaat atagaaaatt tggaaaatat gagaagcttt
      301 gttgataaag ttgccataac tcatgttaat ttaggagtta aagaagagca ttatcctata
      361 gttggagctt gccttttaaa ggctattaaa aatcttttaa atcctgatga agccactctt
      421 aaagcttggg aagttgctta tggaaaaatt gctaaatttt atatcgatat agaaaaaaag
      481 ctctatgata aataatataa gcccattttg ggctttaatc aaatttttct actaaatttt
      541 tagctaattc ctttatattc tcacccttta attcgctgat ttcaccattt tgagccaaga
      601 aaattctatc agcactatca aaatatgcat catcatgtgt gatagcaaag attgttttac
      661 cttgctcttt tagcaaaggt aaaagttttt tataaaaaaa tcttctaaaa acaggatctt
      721 gatcagccgc ccattcatca agcactaaaa tatccctttc ttcaagcaag gctataagca
      781 tagctaaacg ctttttttgc cctgtagaaa gtttggttaa ggtcagttca ttatctttga
      841 cacttgtttt atttttaagt tctaaaaact ccaaccaaaa agcaattttt tcttcgcttg
      901 caaaattttc tttatttaag gttttagtaa aaagatgaaa atcgctaaaa acagcagaaa
      961 taagagatct atactcatct aaatttttat catctataag cgtatcatca acataaattc
     1021 cgcctttgct tggcttaaaa agtcctgtca aaagcataca aaaagtggat ttaccacttc
     1081 catttttacc tattaaaaat accaattcac cttttttaag ttctatattt acaggattta
     1141 aatgaaaatt ttcttcataa gcaaattgag tatttctaaa agaaattttt ttccattcac
     1201 tgatataatg tgttttttta aaaccttcta tataatcatc taattccaat tttgcgatct
     1261 tatccaaagc gatttttgcc aaaagcaaag taggaaaaga tcctatcata gatactaaag
     1321 gggttcgtaa aaacaaaata gaaagagcta tagttgtagc atctgcaaca cttgcccatt
     1381 caaattttaa agctaagtaa aactctacac ccactaaagc caaaagagtt acatttgtcc
     1441 agttgtttga gagattgtta aaaagattac ctaaagtact atttttcttt ttcaatcttg
     1501 cattattttc aaattcatct tcataataaa gcttggctct atcacgattg atcaaaagtt
     1561 ctttatgtcc atctagtata ttttggtaat tattttgcaa agcatcatca ttttcccttg
     1621 cctttctaaa atactgatat actttcatca tcaaaaaatt attagtaata aaaataacca
     1681 taatccatac cacacacaaa gcaaaaattt gtggtgaaag ataacataaa taaacactag
     1741 tgcataaaat caatatactt gattgtaaaa aatcaggcaa tcttaaaagc ccaaaagata
     1801 tatttctcac atcacttccc aaagaagcta aaattctagc cttacctact ttagcgactc
     1861 ttaacaaagg ggtgtctaag atctgcttta ctacgcgcct ttgcatttta aaaataaaat
     1921 tttgtccaaa aatactaagt ccaagttcaa ctatggtaga acttataaaa aaaatcaaaa
     1981 gcaaaacaat aaaataaaaa ataggaatgt tttgtgcatt tttaagcaaa taatcattga
     2041 taaaaacaag agttaaaact ccaacagcgc ttgtaataaa agaaaaaagc aaaaaagaaa
     2101 tcaactttaa tttattttgc ttaagtaatt ccataataaa aggcatttat aaactccaaa
     2161 atataatttt aattataaca ttttaagagt gattatcaaa attttatttt atcttttact
     2221 ataaaaacag cacaaatagc caataacgct aaaaaaatca tatatatact cataccatat
     2281 aaaaatggat tttcattttt actcgcaagt gtattaagcc aaaaaacgag ttgcggagta
     2341 ataccgcctg aaattgcata agaaatatta taagaaaaag aaattcctga aaatcttatt
     2401 ttagctctaa aaacttcact cattaaaata ggtgcgaaca cattaatccc acctaaaaaa
     2461 caaataatcg aatacaaaat acacaccaaa accaaatttt taagctcata taaagcataa
     2521 aaatataaaa aagaaaaaaa tacaaaagtt aaagaaaaga aaatgcaaat tttaaataaa
     2581 ccaaatttat ctacaagata acccataaaa gccccgccta aagctattcc caaaattcct
     2641 aatatctgta aataacttcc ttcaacccca cttaaattta aaatactagg cataaattta
     2701 ggcatcaata aaacaagcac aataacacaa cctgttaaaa cccaagtcat catcattgat
     2761 gaaaataaat tttttacaat atccttttct ttaaataaat ctttaagcgg aaaagaacta
     2821 agcgatgatt cttttttcat ttgtttaaaa acaggagttt cttgcaaaaa tctacgcaaa
     2881 taaatagaaa taatcccaaa aattccacct acaaaaaaag caatacgcca accataagca
     2941 gcaatttctt ctatgctaaa aaaagcatta atgattaaaa atactatact tcctaacaaa
     3001 attcctaaag ccatagctga atttaaacag cttaaaaaga aagctttttg tttttcttga
     3061 caatactctc ttacaaaaac ccaagctcca ggcaattctc cacctatagc tatgccttga
     3121 aaaattctta taagtatcaa taaaacagga gctaaaaacc caagagtttc ataacctgga
     3181 ataaaagcta agacaaaggt aggaagaacc attagtaaaa tacttagcat aaacatattt
     3241 ttacgcccaa atttatctcc aaaatgtgcc ataactatac cacccaaagg acgtgctaaa
     3301 tatccagctg caaatgctcc ataagtattt aataaagccc aaaattcact catatcttta
     3361 ggaaaaaata cattggctat atattcagca aaaaagacaa aaataataaa atcataaaat
     3421 tctaaagttc ctcctagtga agaaagtcct aagatcttaa tttcctttgt tccaaatttt
     3481 gattttctca ttgattaatt accttaaatt ttaaaaacat tgtttttatt atactat
//
LOCUS       DAPIYB010000110         3302 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.111, whole genome shotgun sequence.
ACCESSION   DAPIYB010000110 DAPIYB010000000
VERSION     DAPIYB010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3302
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.111"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..399)
                     /locus_tag="RJ318_001600"
     CDS             complement(<1..399)
                     /locus_tag="RJ318_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HDV7431437.1"
                     /translation="MKKEQLEVLKEALNGLIYQIDNHQQARKPIADVERIISELQVLN
                     HWNKQENVYNALHLIQGAIADPQGLGRLNLLLDNARIPKQYYDIFYKMLYVDKYGGGD
                     GYRPVCIDCGGHAGLITDIILHCGGQSYIFE"
     gene            complement(418..1359)
                     /locus_tag="RJ318_001601"
     CDS             complement(418..1359)
                     /locus_tag="RJ318_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase"
                     /protein_id="HDV7431438.1"
                     /translation="MSKKVLITGGAGYIGSVLTPILLEKGYEVCVIDNLMFDQISLLS
                     CFHNKNFTFINGDAMDENLIRQEVAKADIIIPLAALVGAPLCKRNPKLAKMINYEAVK
                     MISDFASPSQIFIYPNTNSGYGIGEKDAMCTEESPLRPISEYGIDKVHAEQYLLDKGN
                     CVTFRLATVFGISPRMRLDLLVNDFTYRAYRDKFIVLFEEHFRRNYIHVRDVVKGFIH
                     GIENYDKMKGQAYNMGLSSANLTKRQLAETIKKYIPDFYIHSANIGEDPDKRDYLVSN
                     TKLEATGWKPDNTLEDGIKELLRAFKMMKVNRFANFN"
     gene            complement(1383..2423)
                     /locus_tag="RJ318_001602"
     CDS             complement(1383..2423)
                     /locus_tag="RJ318_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HDV7431439.1"
                     /translation="MQTNSKIYIAGHKGTAGTALVENLQKRGFNNLVLKTRQELDLVN
                     QQAVAKFFKEEKPEYVFLTAVLPCGAANVAQRADFIYENLMIQNNVIHNSFLNNVKKL
                     VFFGSGYMYPENAKNPLKEEYLFQGDLEYGAYSFGAAKIAGAIMCESYNIQYGTNFIT
                     LVLNNLYGTKANFDFGKSRVLPALLRKFHLAKLLSEGNITQILQDLKMNNFEEAKEYL
                     HNFGISKKSVEIWGTGKVRREFIHSDDLADVAIYTMQNIDFKDLIKDRKSKNTHINIG
                     TGIDYSIKEVALMVKNIVGFSGELVFNTSRPDSTMDRLMDCSKIHSLGWKHKIELKDG
                     IKMMYEWYKTQN"
     gene            complement(2423..3046)
                     /locus_tag="RJ318_001603"
     CDS             complement(2423..3046)
                     /locus_tag="RJ318_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431440.1"
                     /translation="MSDINAKALSLGVSDSSPWDLEMAQRGFKVIEYDASIEKCPYDH
                     ENIVFHKKFIGNVNNENTITLVQALKDNNLDESKPNILQCDIENCEWDMLENIDISIL
                     NKYFSQVIFEFHGCNPEEQDGVEKRISLLKKLNEYFVPMHTHFHNHGKIFYSQGLFFS
                     TTLEVSYLRKNLINLDIMKYRDVAGGFKNLDFPWISNPEIPIRFRGY"
     gene            complement(3050..3302)
                     /locus_tag="RJ318_001604"
                     /pseudo
     CDS             complement(3050..3302)
                     /locus_tag="RJ318_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858116.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1114 a          637 c          363 g         1188 t
ORIGIN      
        1 ctcaaagata taactttgcc cgccacaatg taaaataata tcagtaatta agcctgcatg
       61 tccaccacaa tcaatacata ctggacgata tccatccccc cccccatatt tatcgacata
      121 aagcatcttg taaaaaatat cataatattg ttttggaatt ctggcattat ctaataacaa
      181 atttaatcta ccaagccctt gtggatcggc tatagcaccc tgaattaaat gcaatgcatt
      241 ataaacattt tcttgcttat tccaatggtt taatacttgc aactctgaaa ttatcctttc
      301 tacatcagct attggtttcc tagcttgctg atgattatca atttgataaa tcaagccatt
      361 tagagcctct tttaatactt ccaattgttc ttttttcatt atttatctcc tttaatttta
      421 attaaaattt gcaaagcgat taactttcat cattttaaac gctcttaaaa gctctttaat
      481 accatcttct aaagtattat ctggtttcca acctgtagcc tctaatttag tatttgaaac
      541 caaataatct cttttatctg gatcttcacc tatgttggct gaatggatat aaaaatcagg
      601 aatatacttt ttaattgttt cagcaagctg tcttttggtc aaatttgcag aacttaatcc
      661 catgttataa gcctgaccct tcatcttatc ataattctca attccatgaa taaatccttt
      721 aaccacatcg cgaacatgaa tataattgcg tctaaaatgc tcttcaaaaa gcactataaa
      781 tttatctcta tatgcacgat aagtaaaatc attaacaagt aaatcaagtc tcattctagg
      841 tgaaattcca aaaacagtag ctaaacgaaa agtcacacaa tttcctttat cgagcaaata
      901 ttgctccgca tgcactttat cgatcccata ttctgagata ggacgcaagg gagattcttc
      961 agtacacatt gcatcttttt ctcctatacc ataaccgctg tttgtattgg gataaataaa
     1021 tatttgagaa ggacttgcaa aatcacttat catttttacg gcttcataat tgatcatttt
     1081 agctaatttt ggatttcttt tacaaagtgg agctccaact aaagcagcta gaggaataat
     1141 aatatcagct tttgctacct cttgcctaat aagattttca tccatagcat caccatttat
     1201 aaaagtaaaa tttttattat gaaaacaaga taaaagagaa atttgatcaa acatcaaatt
     1261 atcaatcaca caaacttcat aacctttttc aagtaaaatc ggcgttaaaa ccgaacctat
     1321 ataacctgca ccacctgtaa ttaaaacttt ttttgacata cttttccttt cgtctttgaa
     1381 aatcaatttt gtgttttata ccattcatac atcattttaa taccatcttt aagttcaatt
     1441 ttatgcttcc aacctaaaga atgaattttt gagcaatcca taagtctatc cattgtgcta
     1501 tccggtctag aagtattaaa aactagttct ccgctaaacc caactatatt ttttaccatc
     1561 aaagcaactt ctttgattga atagtcaata cctgtcccta tattaatatg ggtattttta
     1621 ctttttctat ctttaataag atctttaaaa tcaatatttt gcatcgtata gatagctaca
     1681 tcggctagat cgtcactatg aataaattct ctcctaactt ttccagtgcc ccaaatttct
     1741 acactttttt tactaattcc aaaattatgc aaatattctt ttgcttcttc aaaattattc
     1801 attttcaaat cttgaaggat ttgagttata ttaccctcgc ttaacaattt tgctaaatga
     1861 aattttctaa gcaatgcggg taagactctt gattttccaa aatcaaaatt tgctttagtt
     1921 ccgtaaagat tatttaaaac aagagtaatg aaattagtac catattgaat attataactt
     1981 tcacacatta tagctccagc tattttggct gcaccaaaag aataagcgcc atattctaaa
     2041 tcaccttgaa ataaatattc ctctttcaat gggtttttag cattctcagg atacatatac
     2101 ccagaaccaa aaaataccaa ttttttaaca ttattaagaa atgaattgtg aataacattg
     2161 ttttgaatca tcaaattttc ataaataaaa tcagcccttt gagcgacatt tgcagcacca
     2221 caaggtaaga ctgcagtcaa aaaaacatat tctggctttt cttctttaaa aaatttagca
     2281 accgcttgct gattaaccaa atcaagctct tgccttgttt ttaaaacaag attattaaat
     2341 cctctttttt gtaagttttc taccaatgct gtacctgcgg ttcctttgtg ccccgctata
     2401 tatatttttg aatttgtttg catcaataac ctctaaatcg tattggaatt tctggatttg
     2461 aaatccaagg aaaatctaaa tttttaaatc cccctgcgac atctctatat ttcataatat
     2521 caagattaat caaatttttt cttaaataac taacctccaa agtggtacta aaaaataatc
     2581 cttgagaata aaaaattttc ccatggttgt gaaaatgtgt atgcattgga acaaaatatt
     2641 cattaagttt ttttagcaaa cttattcttt tttccacccc atcttgctcc tcaggattgc
     2701 acccatgaaa ttcaaatata acttgtgaga aatatttatt taaaatactt atatcaatat
     2761 tttcaagcat atcccattcg caattttcaa tatcacattg caaaatattt ggcttgctct
     2821 catctaaatt attatctttt aaagcttgta ccaaagtaat tgtattctca ttatttacat
     2881 tacctataaa ttttttatga aaaacaatat tttcatggtc ataaggacat ttttctatac
     2941 tagcatcata ttctatcacc ttaaatcccc tctgagccat ttctaaatcc caaggagaac
     3001 tatccgaaac acccaaagaa agagcttttg cattaatatc actcatatcc ccccccccat
     3061 tatacatcac ataaccacca tctccattac cacctattct taacaaatca cacaaaggca
     3121 attccaaagg tcgaatgaga tttaaataat ttataatatt ttgataacat tgttcattat
     3181 tatttatacg aatataattt ctatctcttg cttgtaataa taaaagtaaa atttctttat
     3241 cttttttatc aatatctaaa ttcgaaataa tatttgacat taagatttga taggacaatt
     3301 ga
//
LOCUS       DAPIYB010000111         3300 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.112, whole genome shotgun sequence.
ACCESSION   DAPIYB010000111 DAPIYB010000000
VERSION     DAPIYB010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3300)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3300)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3300
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.112"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            184..882
                     /locus_tag="RJ318_001605"
     CDS             184..882
                     /locus_tag="RJ318_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDV7431441.1"
                     /translation="MKTFISNHKNQSSFITLFVFTPLFFVFLYSKDFLHIQPNEIIKE
                     NKFNMAIKHFVQNSSDMKPTQPTQTIQEPSNVQPKEPVQEIKKIKPRKEKPIAKPKKI
                     IPPANAKAISQPKKDTNMQQPIMQQQTPQASSYQSVSLTSNSELLKEIKSAIDEALIY
                     PRQARKMRMSGEVLVEFTWTKEKKLENLKILKPSKYDFLNKSALETIRIASKKFPQYE
                     KTFHIKIPLVYKLS"
     gene            complement(974..1411)
                     /locus_tag="RJ318_001606"
     CDS             complement(974..1411)
                     /locus_tag="RJ318_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002795935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV7431442.1"
                     /translation="MKKDSYHKITSKLIQEFDLLAVEDLQIKNMCKRAKLKNIKAKSG
                     LNKSILNTSFYQFSQYLEYKAKHNGKFFIKVNPQYTSKTCSVCGNIKKNLMFKDRVYL
                     CEKCGNTLHRDINAANNILKRGLKSFGLGISLEDYKLKAFRIS"
     gene            complement(1532..1795)
                     /locus_tag="RJ318_001607"
     CDS             complement(1532..1795)
                     /locus_tag="RJ318_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002890613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDV7431443.1"
                     /translation="MNTFFKMRYHRDLPNTYKFNQITIIKNHNKYYLAFSIIYDESNV
                     SLMSSKDFDIKKAVDIDLNINEITLSSGELIATNSKLLSRAEY"
     gene            complement(2224..2316)
                     /locus_tag="RJ318_001608"
     CDS             complement(2224..2316)
                     /locus_tag="RJ318_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431444.1"
                     /translation="MLETLKKYAENQGIEDNYPKKIYNQKEKKP"
BASE COUNT         1272 a          538 c          357 g         1133 t
ORIGIN      
        1 gtttttttag agaagtaaat agcaaaaatt aaatatcttt tagatataag cttgattatt
       61 tgattgttat ttttctctgt gaaatttgtt tcaaaattta tctttttaaa caatttacca
      121 tagaatgtgt tttaagaaat aaagatattt aaatcaaaaa ataaaatcat aacggagtaa
      181 aagatgaaaa catttataag caatcataaa aaccaatctt cttttatcac tttatttgtt
      241 tttacacctt tattttttgt ttttctttat tctaaagatt ttttacacat acaacccaat
      301 gaaattatta aagaaaataa atttaatatg gcaatcaaac attttgtaca aaattcctcc
      361 gatatgaaac cgacacaacc cacacaaact atacaagagc cttcgaatgt gcaacccaaa
      421 gaacctgtgc aagaaataaa aaaaataaaa ccgagaaaag aaaaacctat cgctaaacct
      481 aaaaaaataa tccctccagc aaatgcaaag gcaataagtc aacccaaaaa agatacaaac
      541 atgcagcaac caatcatgca gcaacaaact ccacaagcca gctcttacca aagcgtatct
      601 ttaactagta atagtgagct tttaaaagaa ataaaatcag caatcgatga agccctaatc
      661 taccctagac aagctagaaa aatgcgtatg agtggggagg ttcttgtaga atttacctgg
      721 acaaaagaaa agaaattaga aaatttaaaa atacttaagc cttcaaaata tgattttcta
      781 aataaaagtg ctttagaaac tatacgcata gcttctaaaa aatttccaca atatgaaaaa
      841 acttttcata taaaaatacc attggtatat aaattaagct aaatctttca caatatactc
      901 tatttttaat gcaaatcact ccagctttgc taacgcttag aagtagaagc ttcctagcta
      961 aagctaacta gtattagcta attcgaaagg ctttgagttt atagtcctca aggctaattc
     1021 ctaacccaaa cgactttaat ccacgcttta agatattatt tgcagcatta atatctctat
     1081 gtaaagtgtt gccacatttt tcacaaagat acactctatc tttaaacata agattttttt
     1141 tgatatttcc acatacacta caagttttgc ttgtatattg tggattgact tttataaaga
     1201 atttgccatt atgctttgct ttatactcta gatattgaga gaattgatag aatgaagtat
     1261 taagaataga tttatttaaa ccacttttag cttttatatt ctttaattta gctcttttac
     1321 acatattctt aatttgcaaa tcttcaactg ctagcaagtc aaattcttgt atgagttttg
     1381 aagttatctt gtgataacta tcctttttga ttttgaactt ttttcataga ttttatttaa
     1441 ttttaattgt gtttttttga aattatggct taactttgtt ttctcctttt ttgtttttaa
     1501 tattctcctg ctttgttttc tttgcaatct tttaatattc agctctacta agtagctttg
     1561 agttagtagc tattaactct ccactgctta aggtaatctc attgatattt aaatcaatgt
     1621 caactgcttt tttaatatca aaatctttgc tagacattaa agaaacattc gattcatcat
     1681 aaatgatact aaaagctaaa tagtatttat tgtgattttt gataatagtg atttgattaa
     1741 acttataagt atttggtaaa tctctgtgat aacgcatttt aaaaaatgta ttcataagtc
     1801 taaatatctt aaacttagta gtatcactat ctttgatttt gtaggcttga ttattccaat
     1861 taaagctttg ctttgcaaat ttagagtttt taaatttgag aaagcctttg tttttatctc
     1921 taattgcttg ctctaaggca cgagaagatt aatccttgct tgttgggtta caacactttt
     1981 atagcttaat tctcttgctt ttataaggct agttttattg attatctatc ttacttgcct
     2041 ttaaataact cctatctttt ttatctaaat tcttattttt atcccactct cttgctgtaa
     2101 atttaaacaa atattatagg cttgatatag atgaaacatt gatgattaat aagcttttgt
     2161 tgttctttgt ttaggtagaa ttctatattt aaaacctttg gttatttgca ttgctttgtt
     2221 ccattagggc tttttttctt tttggttata tattttttta gggtaattat cttctatgcc
     2281 ttgattttct gcatattttt taagagtttc tagcattatt ccgcataggt attctataaa
     2341 aaattactga ttatgtcaaa tacctaacta gagccgtaca actaacactg taagcaattc
     2401 atctcccact taagaagtga gagttttatt gaataaaaaa agataaattt aaagcaagta
     2461 atcttttttt agacaacact aaacccttgc atgtatttac agcaatattt atttcatcat
     2521 aaacaacccc caacccataa aacctcaata aacactataa aataaaagta tttgtaaaga
     2581 acaagcaaac aataaatctc aatcacccag acaaaaacaa tctcaaccga cccataaagc
     2641 aataaatcaa gcaagcataa ttaatttaat tgattaaact aataaattta atttataaga
     2701 ttaacaataa aaaaccataa attaaccaag ctaatcccac ccaaacccaa acaagccata
     2761 aattacacac acttttttac aaacatcaat taaatagcaa gactatcgat aataaaaaat
     2821 ttatctcaag tataacattc attctcgcca acaagaatag acaatcatag tctatccacc
     2881 ctaacccaac attaacccct aacccaacta agaagtgtat aacaacccca acccataaac
     2941 ctcaataaac actataaaat aaacttgagt gattaaaaat ccaacccaat tattgaacaa
     3001 acccaaccta cataataaaa tataaactag acatataaag aacaattgac acataaaaat
     3061 agattgaata aataaaccta tacaagtaaa cataaagatt aattattgat acaaaagatt
     3121 caataaataa ataaaaagaa taattgagat ataaaaacat ataaactaaa caactcaaac
     3181 aaccattaaa tcaacccaag ctaattaaac ctataaacat aaaaaaataa ttaaatataa
     3241 aaacaacgat tgacgtataa aaactaagat tttaaatcta taagaataag ataaagcaga
//
LOCUS       DAPIYB010000112         3173 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.113, whole genome shotgun sequence.
ACCESSION   DAPIYB010000112 DAPIYB010000000
VERSION     DAPIYB010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3173
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.113"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(111..1457)
                     /locus_tag="RJ318_001609"
     CDS             complement(111..1457)
                     /locus_tag="RJ318_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate transporter"
                     /protein_id="HDV7431445.1"
                     /translation="MEIFLALLGFFSLGLIVWLLLKDYTTPALAFISVSISVACILLI
                     LERLGFGVGVALGVKGGVFDIKTLVVFIKDGVKSVTDTAALFVFSILFFSVLNASGFF
                     TKILNAFLSKMKANVYQVCILTVFIAAAVHLDGSGASTFLIVIPALLPIYERLGIRKT
                     SMLLIITSAMGVMNVIPWGGPTLRAATNIGMDANLLWHHIIPIQIVGLVLSLLLAIWI
                     AKIEIKRGAGAGNLSGINLNIEKSEHHNEKWFWLNLLVAIGVIGLLISGIIPSYIYFM
                     IGLAIILPLNYPNLKTAKKVLDRASAGAMLMYITLIGAGILIGVFDKSGIMEKMGVLI
                     LNFVPDYLGAYIPLMVGILAVPMAIIFCTDSYFYGVMPIVLSVTKAFGAEPLTIAIIM
                     VIARNCATFISPVVPATLLGCGLAEVNIKDHIKRSFFYIWGISIICLIFAEVAGII"
     gene            1699..2040
                     /locus_tag="RJ318_001610"
     CDS             1699..2040
                     /locus_tag="RJ318_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4878 domain-containing protein"
                     /protein_id="HDV7431446.1"
                     /translation="MAYGSSNPEDLAKNFTKDLYSGDTKSVMSYIDLSEAKSDEEKTF
                     VSDKITQVVAENAAKAKRMGGVKDIQIEEKTINKDSAKIRVLVLFNNDNNQSSNVFLA
                     KKDRKWLVLLK"
     gene            2024..2629
                     /locus_tag="RJ318_001611"
     CDS             2024..2629
                     /locus_tag="RJ318_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431447.1"
                     /translation="MFYLNKILYFFLILFLLIGILGFFINSNPSNQIIKKPYLPFLEI
                     GDLVFRAGIGSESFLIENLSQSPYSHIAMVVKTSPTILIHATTDDDKNAKNQVILSSM
                     DDFLKLSHKIAIKRLKFDEKTKQKIVAKDLEHLGRKFIISTDKDAFYCTTFLEQSINS
                     ITPFHLQYTLIKAPFNEGLYLFPQTFFENNQSVLIYESQNF"
     gene            2693..3040
                     /locus_tag="RJ318_001612"
     CDS             2693..3040
                     /locus_tag="RJ318_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431448.1"
                     /translation="MKKSILFASALLASSMLFADSLKLEGTIAQIYDNNKTLLIDSIY
                     GGQMAIKVLPNTEIEMDDCGIFGTDKDGTFKDLQVGNFLESKISYGTPATPNTQAIPV
                     ARKIEIQCYKKAY"
BASE COUNT         1254 a          530 c          371 g         1018 t
ORIGIN      
        1 gcaaaataaa ataatacaaa aaaacgctta tatttttata aatttttgac tcaaaaatat
       61 cataaaacaa tgaaccaatc attgaaaaat caaaagttct tttattttaa ttatattatc
      121 ccagctacct cagcaaaaat caagcaaata atacttatac cccatatata aaaaaagctt
      181 cttttgatat gatctttaat attaacctct gctaaaccac aacctagcaa agttgcaggc
      241 acaacaggag aaataaatgt cgcacaattt cttgctatca ccatgataat agctatagtc
      301 aaaggttcag cgccaaaagc cttagttaca ctcaaaacta taggcatcac tccataaaaa
      361 taagaatctg tacaaaaaat aattgccatt ggaacagcca atatccctac catcaaagga
      421 atataagcgc ctaaataatc tggaacaaaa tttaaaatca aaacacccat tttctccata
      481 ataccacttt tatcaaatac gcctattaat atcccagcac caattaaagt aatatacata
      541 agcattgcac cagcacttgc acgatctaaa acttttttag ctgtttttaa attaggataa
      601 ttaagcggta aaattattgc aagtcctatc ataaagtaaa tataactagg aataataccg
      661 ctaattaaaa gcccaataac tccaatagct acaagtaaat ttaaccaaaa ccatttttca
      721 ttatggtgtt cgcttttttc tatatttaaa tttattccag acaagttacc tgcgcctgca
      781 cctcttttta tttctatctt agcaatccaa attgccaaaa gaagggataa taccaaacct
      841 acaatctgaa taggtataat atggtgccaa agcaaatttg catccattcc tatattagta
      901 gccgctctta aagtaggacc accccaagga ataacattca taacccccat agccgaagta
      961 ataatcaata acattgaagt ctttcttata cctaaacgct cataaatagg taataatgca
     1021 ggtattacaa taagaaaagt agaagcacct gaaccatcta aatgcacagc agcagcaata
     1081 aaaacagtaa gaatgcaaac ttgatataca ttagctttca tttttgataa aaatgcattt
     1141 aaaattttag taaaaaaacc acttgcattt aaaacactaa aaaagagtat agaaaaaaca
     1201 aacaaagctg ccgtatccgt tacgcttttg actccatctt taataaaaac aaccaatgtt
     1261 ttaatatcaa aaacacctcc tttaacccct aaagctacac ccacgccaaa accaagccgt
     1321 tcaagaataa gtaaaataca agctacacta atacttacac ttataaaagc taatgctgga
     1381 gtagtataat cttttagcaa aagccaaact atcaatccta acgagaaaaa acccaataaa
     1441 gctaaaaaaa tttccatatc ctatcctttt gtatcatttt tattcgataa taaaatagga
     1501 tattttaact ccaacttata tgtgtttaaa tttatagctt tttaaaaaaa tatattttct
     1561 aatgtaacca ttataaacaa gaataaaaaa ataattttga attattttgc tataattatg
     1621 aatattttaa tttatactat caaaagaaaa aatgaaattt tttaaacttt ctttcttggc
     1681 tttagttgcc tttttttagt ggcttacggt tcttcaaatc ctgaagattt agctaaaaat
     1741 tttacaaaag atctttacag tggtgatact aaatctgtta tgagttacat tgatcttagc
     1801 gaagctaaaa gcgatgaaga aaaaacattt gttagtgata aaatcactca agttgttgct
     1861 gaaaatgcag ccaaagcaaa aagaatgggt ggtgttaaag atattcaaat tgaagaaaaa
     1921 acaatcaata aagattctgc taaaatcaga gttttagtgt tatttaacaa tgataataat
     1981 caaagcagca atgtttttct tgctaaaaaa gatagaaaat ggcttgtttt acttaaataa
     2041 aattttatat tttttcttaa ttttattttt attgattgga attttgggtt tctttataaa
     2101 ttccaatcct tcaaatcaaa tcatcaaaaa accctatcta ccttttcttg aaataggtga
     2161 tcttgtcttt cgtgcaggaa taggaagtga aagtttttta atagaaaatt taagtcaaag
     2221 cccttattct catatcgcta tggtagttaa aacttctcca actatactca tacatgctac
     2281 aacagatgat gacaaaaatg ctaaaaacca agttatctta agctctatgg atgatttttt
     2341 aaaactgagt cataaaattg ctattaaaag attaaaattt gatgaaaaaa ccaaacaaaa
     2401 aatagttgct aaagatttgg aacatttagg cagaaaattt atcataagta cagataaaga
     2461 tgctttttac tgcactactt ttttagaaca atctattaac tccattaccc catttcatct
     2521 tcaatatact ctaatcaaag ctccttttaa tgaaggttta tatctttttc cacaaacttt
     2581 ttttgaaaat aatcaaagcg tattaattta tgaaagtcaa aatttttaat ttcacattca
     2641 cttcacttaa aaattttata atgtcatcac tttacattaa ggagaaataa ttatgaaaaa
     2701 aagtatttta ttcgcatcag cacttttagc tagctcaatg ctttttgcag atagtctaaa
     2761 acttgaaggt actattgcac aaatttatga taacaacaaa accttgctta ttgactctat
     2821 ttatggcgga caaatggcta taaaagttct accaaatacc gaaatagaaa tggatgattg
     2881 tggtattttt ggaacagata aagatggaac ttttaaagat ttacaggttg gaaatttttt
     2941 agaaagtaaa atttcttatg gaacacctgc tacaccaaat actcaggcta ttccagtagc
     3001 tagaaaaatt gaaattcaat gttataaaaa agcttattaa tataaatccc ttaacaaggg
     3061 atttataaaa atcattcttc ggcaaactac ttcattactc ttaaataaaa atttaaactc
     3121 ttttttaaca agcaatttat aaaataacac ttatattttc atctaaggca aat
//
LOCUS       DAPIYB010000113         3106 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.114, whole genome shotgun sequence.
ACCESSION   DAPIYB010000113 DAPIYB010000000
VERSION     DAPIYB010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3106)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3106)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3106
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.114"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..1673
                     /locus_tag="RJ318_001613"
     CDS             <1..1673
                     /locus_tag="RJ318_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDV7431449.1"
                     /translation="DTQIYKELKCAKNEALILRELCRNYVVSISSINAFTLLSTIFGN
                     DKYLYLDALEDLKKLIERGFVNQNSSFFKSLENNKTQTLTLALLQSELSLSEYFLEFL
                     EAKPRLNFEKQEAYADYLEYLKDEFARIQLYERLSFIQKSAYNSEIKNQIKLYERHIK
                     ERLKKSKFYNVLADIFKEYNLEHKEQIIFLALLKEEYALSNESSISREMNSLLSLISE
                     NDLERHKNKKLLQENAPLLNLIECDEYLNAFGDISKSFFIIDEILQRIINFEPKQSKK
                     IKIESVLKDQDIFELIEPSTDINDIIMPENTKELLENILKQQDKKVLERLHSWGIKSN
                     KNIEAKIIFYGPAGTGKTMSALAMAKSMKKSVLSFDCSKILSKWVGESEQNVRKIFDT
                     YKNIVQTCKQSPILLLNEADQFLSTRVDGSSGSDKMHNQMQNIFLEQIERFSGVIIAT
                     TNFLESLDSAFSRRFDYKIEFKKPDFKDRLKIWEKFLPKKALFEKDFDINILSNYELS
                     GAQILMVVKNTALKVAVSKDGVFKMQDFIESIQKELNSSFDKSKIVGF"
     gene            complement(1638..2210)
                     /locus_tag="RJ318_001614"
     CDS             complement(1638..2210)
                     /locus_tag="RJ318_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase heme-binding subunit YedZ"
                     /protein_id="HDV7431450.1"
                     /translation="MQTKYFKFLAYFSFIISLIYGFYHIIKAFDFVKEAYIYTGIFAL
                     IFLNLSLLFSLLKFKKTRNYPKILGIFAAFWAILHFLNYFIFDRNAQILRLFDDISHR
                     LLEASGFIAFLIIFLMLLSSFKIFKKLSKIRKLGYLCLVLASYHYFLTPKIPMFWEWS
                     ALIIALFYFIVRYTKTLKKLKSNNLTFIKT"
     gene            complement(2210..3103)
                     /gene="msrP"
                     /locus_tag="RJ318_001615"
     CDS             complement(2210..3103)
                     /gene="msrP"
                     /locus_tag="RJ318_001615"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HDV7431451.1"
                     /translation="MLITPEKLYKQRRNFLKLGAGALISSSVLASKLSALNFTSDTNP
                     NKLEISDEELATNYVNFYEFSTDKRKAVSLAQNFNTQNWKIDISGEIEKPLTLSMEDI
                     LKFPLEERIYRFRCVETWSMVVPWVGFELRRLIEMAKPTSEAKFVKFTTLLDKSQFPD
                     QDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSI
                     KSIVKIKFTKEQPKSTWESYAPSEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLM
                     FNGYEKEVASLYKNMDLKVNF"
BASE COUNT         1189 a          387 c          472 g         1058 t
ORIGIN      
        1 aagatactca aatttataaa gagcttaagt gtgctaaaaa tgaggctttg attcttaggg
       61 agctttgtag aaattatgtc gtttctattt cttctatcaa tgcctttact ttattatcga
      121 caatttttgg aaatgataag tatctttatc ttgatgcttt ggaggattta aaaaaactta
      181 ttgaaagagg ttttgtaaat caaaattcga gtttttttaa aagtttagaa aataataaaa
      241 ctcaaacatt aactcttgcc ttattgcaaa gtgagcttag tctaagtgaa tattttttag
      301 aatttttaga agcaaaacct cgtttaaact ttgagaaaca agaggcttat gcagattatt
      361 tagaatattt aaaagatgaa tttgcgcgta ttcaattata tgaaagatta agttttatac
      421 aaaaaagtgc ttataatagt gaaataaaaa accaaattaa actttatgaa agacatatca
      481 aagaaagact aaaaaaaagt aaattttata atgtattggc tgatattttt aaagaatata
      541 atcttgaaca taaagaacaa attatttttc tagcactttt aaaagaagaa tatgccttaa
      601 gtaatgaaag ttcgatttct agagaaatga attctttact ttctttaatc agtgaaaatg
      661 atttagaaag acataaaaac aaaaaattat tacaagaaaa tgctcctctt ttaaacttaa
      721 tcgagtgtga tgaatattta aatgcttttg gagatatttc taaaagtttt tttattattg
      781 atgaaatttt acaaagaatt ataaattttg aaccaaaaca aagtaaaaaa atcaaaattg
      841 aaagtgtttt aaaagatcaa gatattttcg agcttataga accaagcact gacatcaatg
      901 atattattat gcctgaaaat acaaaagagc ttttagaaaa tattttaaaa caacaagata
      961 aaaaagtcct agaaagactt cattcttggg gtataaagag taataaaaat atagaagcta
     1021 aaattatttt ttatggtcct gctggtactg gaaaaactat gtcagcttta gctatggcta
     1081 aatcaatgaa aaaatctgtt cttagttttg actgttctaa aattttgagc aaatgggttg
     1141 gagagagtga gcaaaatgta agaaaaattt ttgatactta taaaaatatc gtgcaaactt
     1201 gcaaacaaag tcctatttta cttctcaatg aagccgatca gtttttaagt acgcgtgtag
     1261 atggaagtag tggtagtgat aaaatgcata atcaaatgca aaatatattt ttagagcaaa
     1321 tcgagcgttt tagtggtgtg attatcgcta cgacaaattt tttagaaagc ttagatagtg
     1381 cattttcaag aagatttgat tataagatag aatttaaaaa acctgatttt aaagataggc
     1441 ttaaaatttg ggaaaaattt ctacctaaaa aagcattatt tgaaaaagat tttgatataa
     1501 atattttatc aaattatgaa ttaagtggag cacaaatttt aatggtggtg aagaatacag
     1561 ctttgaaagt agctgtatca aaagatgggg tttttaaaat gcaagatttt atagaaagca
     1621 tacaaaaaga attaaattca agttttgata aaagtaagat tgttggattt taactttttt
     1681 aatgtttttg tatagcgaac tataaaataa aacaaagcta taattaaagc actccattcc
     1741 caaaacatag gaatttttgg ggttaaaaaa taatgataac ttgccaaaac taagcataaa
     1801 tatcctagtt ttctgatttt actaagtttt ttaaagattt taaaagaact taaaagcatt
     1861 aaaaatatga ttaaaaatgc gataaatcca cttgcttcta ataaacgatg tgaaatatca
     1921 tcgaaaagcc ttaaaatttg agcatttcta tcaaaaataa aataatttaa aaagtgcaaa
     1981 atcgcccaaa aagctgcaaa aatacctaaa attttaggat aatttcttgt ttttttaaat
     2041 ttaagtaaag aaaataaaag acttaaattt aaaaagatta aagcaaatat tccagtgtaa
     2101 atataggctt cttttacaaa atcaaaggct tttatgatat gataaaagcc ataaattaaa
     2161 cttatgataa agctaaaata agcaagaaat ttaaagtatt ttgtctgcat taaaaattca
     2221 ctttcaagtc catgttttta tataaacttg ccacttcttt ttcatatcca ttaaacatta
     2281 aagtaggttt ggtaaagaag tctcctaaag ccctttcgtt agcttgagac catctaggat
     2341 gagaaacatt aggattgaca ttagcataaa aaccatattc acttggagcg taactttccc
     2401 aagtagattt aggctgttct ttggtaaatt ttattttaac tatggattta atacttttaa
     2461 agccatattt ccaaggaaca acaaggcgta ttggagcgcc attttgaggc tttaaggctt
     2521 ttttatacat tcctactgca agcaaggtaa gaggatgcat agcttcatcc atgcgaagtc
     2581 cttctacata aggatagtct atagttggaa ataaagcgtc ttgatcggga aattgactct
     2641 tatctaaaag agtggtgaat ttaacaaatt ttgcctcgct tgtaggtttt gccatttcaa
     2701 tcaaacgacg caattcaaag cctacccaag gtaccaccat agaccaagtt tcaacacagc
     2761 gaaaacgata aattctctct tctagtggaa attttaaaat atcttccatg cttaaagtta
     2821 aaggtttttc tatttctcca ctgatatcga ttttccaatt ttgagtattg aaattttgtg
     2881 ccaatgatac agcctttctt ttatctgttg aaaattcata aaaattgaca taatttgtag
     2941 ctagttcttc atcgctgatt tcaagtttgt ttggattagt atcgcttgtg aaatttaaag
     3001 cagatagttt agaagcaagc acgcttgaac ttattaaagc acccgctcca agttttaaaa
     3061 aatttctcct ttgtttataa agtttttcag gtgttataag cataat
//
LOCUS       DAPIYB010000114         2945 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.115, whole genome shotgun sequence.
ACCESSION   DAPIYB010000114 DAPIYB010000000
VERSION     DAPIYB010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2945
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.115"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..956)
                     /locus_tag="RJ318_001616"
     CDS             complement(<1..956)
                     /locus_tag="RJ318_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7431452.1"
                     /translation="MTILEKNIQALLSGVNEPLGNRLLNFIQNKTCSRFSINENLNIY
                     DKTHNVFMYENLEEEINFFYQSILEKTPRYPFICIYGIGNALLIKNLAKHYKHLFVFE
                     SEIELFILALSTIDLSEELCSGKIYLVDIEEERVDIQLLILFDMKDMFEYLSLYEMFV
                     NNVYYKKFYEDIWHKADELCEKNIEVIVRNLNSSLHIAFECYSHLLQNIPSMLESIPF
                     QRILNERKNKFENAIVVSAGPSLAKQLPLLKAYQDKAVIFCADGALNMLEKKGIVPDY
                     VTNLDFTDLAMKFFQNKENKTSLNVLSCATHPSLVHFLDNKSV"
     gene            complement(968..2208)
                     /locus_tag="RJ318_001617"
                     /pseudo
     CDS             complement(968..2208)
                     /locus_tag="RJ318_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344730.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2920 family protein"
     gene            complement(2208..2723)
                     /locus_tag="RJ318_001618"
     CDS             complement(2208..2723)
                     /locus_tag="RJ318_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDV7431453.1"
                     /translation="MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNL
                     KTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSNFNGIKEVNFRVGDDKECLKLVF
                     INKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
                     ASKTYLLIGGM"
     gene            complement(2724..>2945)
                     /locus_tag="RJ318_001619"
     CDS             complement(2724..>2945)
                     /locus_tag="RJ318_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDV7431454.1"
                     /translation="GVVGGASANLNLRSRLQNLCQKYNANLKLAPLKFCSDNALMIAR
                     AAVDAYEKKEFVSVEEDILSPKNKNFSRI"
BASE COUNT         1006 a          519 c          352 g         1068 t
ORIGIN      
        1 acacttttat tatctaaaaa atgaaccaaa ctaggatgag tagcacatga aagtacattt
       61 aaagaagttt tattttcttt attttgaaaa aatttcattg ctagatcagt aaaatctaaa
      121 ttcgtaacat aatcaggcac tatgcctttt ttctcaagca tattcaaagc cccatcagca
      181 caaaatatca ctgctttatc ttgataagct ttaagtaaag gaagttgttt agctaaacta
      241 ggtcctgcag aaactactat agcattttca aatttgtttt ttctttcgtt taagattctt
      301 tgaaaaggaa tgctttcaag catagagggg atgttttgca aaagatgaga ataacactca
      361 aaagcgatat gtaggctaga atttaaattt cttactatta cttctatatt tttctcgcaa
      421 agttcatctg ctttatgcca aatatcttca taaaactttt tgtaataaac attatttaca
      481 aacatttcat ataaacttaa gtactcaaac atatctttca tatcaaaaag tataagtagt
      541 tgaatatcca ctctttcttc ttcgatatcc acaagataaa tttttccact acaaagctct
      601 tcactcaaat ctatcgtact taaagctagg ataaaaagtt cgatttcact ttcaaataca
      661 aaaagatgtt tatagtgttt agctaaattt ttaatcagta aagcattgcc tataccataa
      721 atacatataa aaggatatct aggagttttt tctaaaatac tttgatagaa aaaatttatt
      781 tcttcttcta aattttcata cataaaaaca ttatgagttt tatcatagat attcaaattt
      841 tcatttatac taaaacgaga acaagtttta ttttgtatga aatttaaaag tctatttcct
      901 aagggttcat ttactccgct taataaagct tgtatgtttt tttctagtat ggtcatgaaa
      961 gttttcctta aattttatct atctttaaca atattttgtc atctttttcg ctaaattgat
     1021 acaacaaatc ctcacaagga taagagatac atttttcttt ataatctttt tttagatttt
     1081 gttttatttt ttctaacatt aaaggaagtt cttttttaat caaaagtttt actggaattc
     1141 ccatgccatg atttaagttt ttaataaatt ttccatcaac ttgagattct ttagtaatag
     1201 aatgcaaagt tacatcaaaa ccaagtttct caagctcttc atagaacata gttttttctt
     1261 ttaaagaaac atactcatcg tataaggaat gataacttat aaagcaagtt tttaaacatt
     1321 ttgattgttt taaaagatga tcttcctcta aaagatttcg aatttttctt cttgcgggag
     1381 aaaaaaaacg aggcgatgaa gaattactcg tccaaaaagt ttttgtcgaa caatgtgttt
     1441 taatatgatg aaaaaaatca aaagtagcaa attcactata ctgcataaaa tctatttcct
     1501 ttccaaaacc tacaactctc cataaaaact tagcgtatgc agaattatcc aacactccat
     1561 ctactaacca aggcgcaatc ttagctgcca aatgtgctaa atatcccccg tgagaacccc
     1621 ctatcatgat aattggtata ccccccccat agtatcaaaa ggagcgtgtt ttttaaggta
     1681 aagtgcaaca tttaaaagat cttgagcttg catgatccca aaattttgat actcgttttt
     1741 tgtcggttgc aaactcacat gcaaatttaa aaaataattt ggcgtaaaat tacctttttg
     1801 cttgccttca actatttgat tatttacaaa atgaaaaatt tcactcattg ctttatagtc
     1861 ttgaatttta tcaacatcat aaggaagctt gatatccgca gcttcacaac ttgcttttaa
     1921 aataagcttg tctatatcat ccataaaaaa gcttgatccg gtttgaggac gattgccaat
     1981 acaatgataa tttactccaa ctacagcagt attaaattgc cttaccatat aatcaccaac
     2041 atattggatc gatgatatat catcacccat accttgcacc acaaacacca aggcttcagg
     2101 tgttttttca tcatcatacc aaagcttaaa ttcaagcttt gattctcttt ttataccaag
     2161 ctctacatca tcacaagagt caatctcata agctttactc actatcatta cattccccct
     2221 attaaaagat aagttttact cgctaggttt ttaaaatttt cattcttact taaaatcaca
     2281 caagctttat tactagaaga gcttgtaaag tctatatttt ctaaatcttc atggctttga
     2341 ttagctgcgt tgatgatagc atttttactt gcttcattgc ttgaaattcc catgagtata
     2401 aaatcagctt tatttataaa aacaagtttt aagcattctt tatcatcgcc tacgcgaaaa
     2461 tttacttctt ttataccgtt aaaattacta agatcaacat tttcaacccc gcttacatta
     2521 ctcatcgttt ttatagagct taaatgatca ttttttaaag tataaatgct tatatcattg
     2581 atcaaagttt taaggttgtt taaagacttg ctaacttcag cttcatcctt acttgaactc
     2641 atttttggca aagcaatagc ggctaaaatt cccaaaataa cgatcacaaa aacaagttct
     2701 aatatagtaa aagctttttt catctatatc cttgaaaaat ttttattttt agggcttaaa
     2761 atatcttctt ctacacttac aaattccttt ttttcataag catcaactgc ggctcttgct
     2821 atcatcaaag cattatcaga gcagaatttt aaaggagcta gttttaaatt tgcattatat
     2881 ttttgacata aattttgcaa acgcgaacgc aagttaagat ttgcactagc tccacctaca
     2941 acgcc
//
LOCUS       DAPIYB010000115         2927 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.116, whole genome shotgun sequence.
ACCESSION   DAPIYB010000115 DAPIYB010000000
VERSION     DAPIYB010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2927
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.116"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..98
                     /locus_tag="RJ318_001620"
     CDS             <1..98
                     /locus_tag="RJ318_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDV7431455.1"
                     /translation="KVEYSLTSLGNSLESILKSLENWGNSYKNIV"
     gene            183..1130
                     /gene="arsP"
                     /locus_tag="RJ318_001621"
                     /pseudo
     CDS             183..1130
                     /gene="arsP"
                     /locus_tag="RJ318_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_129557825.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="organoarsenical efflux permease ArsP"
     gene            1140..1462
                     /locus_tag="RJ318_001622"
                     /pseudo
     CDS             1140..1462
                     /locus_tag="RJ318_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002906233.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            complement(1470..1901)
                     /locus_tag="RJ318_001623"
     CDS             complement(1470..1901)
                     /locus_tag="RJ318_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HDV7431456.1"
                     /translation="MAYTIKKVEKETKISAHTLRFWAKKGLFPFVQKDENSVKYFSKS
                     DIEWVKWIEWLRISGMPIEQVKHYIKLCSLGIKTAKERQEMLKQTKKKLQNQIKTLKE
                     SEKVLSKKIKIYEEMLANEVDGFNPESKDYQPCDKLHKFKG"
     gene            1981..>2927
                     /locus_tag="RJ318_001624"
     CDS             1981..>2927
                     /locus_tag="RJ318_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HDV7431457.1"
                     /translation="MLKITKIKRKIMNSIKIKLSLIANLIAIFALIVLGIVSFYFTKT
                     SLYESTLKNQTDLLKVTQSTVEDFRSTNQSFTRALEKDIANLPYQSLITEENIINNVG
                     PILKYYRHSINALNVYLGLNNGKVLLSQKSNDAKMPELRDDLDIKTKDWYQEALKTND
                     IFVTPAYLDTVLKQYVITYSKAIYKDGKIIGVLGVDIPSEDLQNLVAKTPGNTFLFDQ
                     KNKIFAATNKELLNPSIDHSPVLNAYKLNGDNNFFSYKLNNEERLGACTKVFAYTACI
                     TESADIINKPIYKAAFIQAIVVIIVVVFSVILLYFIVSK"
BASE COUNT         1006 a          397 c          373 g         1151 t
ORIGIN      
        1 caaaggttga gtactcactt acatctttag gcaatagttt agaatccatc ttaaaaagtc
       61 ttgagaattg gggaaatagc tataaaaata tcgtttaagt aataaattaa tatatcaata
      121 tatattaatt tattaattta tacatgttat attttttgga aatattttta aaaggataaa
      181 aaatgcagtc ttttttaaat actttcaaag agtttttata tctatttact gagctttctg
      241 tactttttat agctatttct tttttagttt ctattatcaa tcaaaaatac gaaggaattt
      301 tttaaaaaca acttgctggt gacaaaattt caagttattt taaagctata tttttaggtg
      361 ctttaacgcc attttgttcc tgttctacca taccgctttt aagagctttt ttagaagcga
      421 aagtaaaact tagcatagct ttagcttatc tttttacttc gcctcttatt aatcctatta
      481 ttttttccat gctttttgta acttttggtt taaagttaag tttgatttat gtggtttttt
      541 tgatattttt gatatttatt atttcttttg ttttttctaa atttaaggaa gatagttttt
      601 taaaacatat tcctaaaaat acaaaatcaa gtatttttac ccaaagcgct cacaatccta
      661 gcaattttat ttttaaacaa aaatcatgct gtgcaaatac tcaagataag tctaaaaata
      721 taacgataaa ctataaagaa ttattcaaag aaagtttgaa aaattataaa aaattattac
      781 cttatatcgt tgtggcagtt tttatcggtg cttttattca tggttttatt cctcaagaaa
      841 ttttacaaaa atacctaaat ggcaatgaaa ttttaagcat tgcattagcg gcttttttag
      901 gaattttcct ttatttaaga gtagaaacta ttattcctat aggcttagca cttttacaaa
      961 tgggaatttc tcaaggagtg attatgagtt ttttaatcgc tggtgctgga tgttctttac
     1021 ctgagcttgt tttactcaaa caaatgttta aaatgaaatt tttattttta tttgttatga
     1081 ttattttagg cgtggctata tcttttggaa tttttattaa tttaatttaa ggaaataaaa
     1141 tgcaaaaatt tttagccatt atttcggcga tcaatgatga aagtagggtt ttgattttac
     1201 atcatctttt aagatacaaa gaactttgtg tttgtgatct acaagagctc ttaaacatgg
     1261 gtcaatcaag actttcaaga catttaaaaa ttttaaaaga tgcgggtttt tgtatgtaag
     1321 gcgtcaagga acttgggcgt attatgggat taataatgag cttttaaagc tgcatttaga
     1381 tctttttgaa aatatcaaaa atttagagct taaaaatgct attaaaaaaa atgaaaatat
     1441 tattacccaa atttgccctt aatataaaat caacccttaa acttatgcaa tttatcacaa
     1501 ggttgatagt ccttgctttc tggattaaac ccatcgactt catttgcaag catttcttca
     1561 taaattttta tctttttgct taaaactttt tcactttctt ttaatgtttt aatctggttt
     1621 tgtaattttt tctttgtttg ctttaacatc tcttgtcttt ctttagcagt ttttataccc
     1681 aaagagcaaa gttttatata atgtttgact tgttctattg gcatacctga aattctaagc
     1741 cattctatcc attttaccca ttctatatcg ctttttgaaa aatatttcac actattttca
     1801 tctttttgaa caaaaggaaa caaacctttt ttagcccaaa atcttaaagt atgagcacta
     1861 atttttgttt ctttttctac tttttttata gtataagcca tattttctcc tttatttaag
     1921 ataaaaataa aaatttattt tatttttttg tgataaaata atagccaaat tattagtttt
     1981 atgctaaaaa taacaaagat taaaaggaaa ataatgaata gtattaaaat caaactttcc
     2041 ctcattgcaa atttaattgc aatttttgcc ttaattgttc taggtattgt aagtttttat
     2101 tttacaaaaa cctcactata tgaaagcact cttaaaaatc aaactgatct acttaaagtc
     2161 acacaatcta ccgttgaaga tttccgttcc acaaatcaat cttttactag agctttagaa
     2221 aaagatatcg cgaacttacc ttatcaatct ttaatcactg aagaaaatat tattaacaat
     2281 gttggtccaa tattgaaata ttatcgtcat agtataaatg cactaaatgt ttatttaggt
     2341 ttaaacaatg gaaaagtttt acttagtcaa aaatctaatg atgcaaaaat gcctgaatta
     2401 cgtgatgatt tagatataaa gacaaaagat tggtatcaag aagctttaaa aacaaatgat
     2461 atttttgtta caccagcata tttagataca gttttaaaac aatatgtaat aacgtattct
     2521 aaagctattt ataaagatgg taaaatcata ggggtactgg gtgtcgatat accatcagaa
     2581 gatttgcaaa atttagttgc aaaaacccct ggaaatactt ttttatttga tcaaaaaaat
     2641 aaaatatttg cagcaaccaa taaagaatta ttaaatccat ccattgatca ttctcctgtt
     2701 ctaaatgcat ataaactcaa tggtgataac aacttcttct cttataagtt aaataatgaa
     2761 gaaagacttg gagcttgtac taaagtcttt gcttatacag cttgtattac cgaaagcgct
     2821 gatattataa ataaacctat ttataaagct gcatttattc aagccattgt tgtcattatt
     2881 gtagtagtat ttagcgtcat cctcctttat ttcatcgtat caaaata
//
LOCUS       DAPIYB010000116         2883 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.117, whole genome shotgun sequence.
ACCESSION   DAPIYB010000116 DAPIYB010000000
VERSION     DAPIYB010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.117"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            62..2047
                     /locus_tag="RJ318_001625"
     CDS             62..2047
                     /locus_tag="RJ318_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010790915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HDV7431458.1"
                     /translation="MLKQSIETYKKGDNLGAKKLSEDAYFQHFENMEGSIGRNIGRKA
                     ITMERKFVNLRRMYKDEAPLTQINALIDSLYYDLDEVAPILQNGYRLKAEASDINYDK
                     AKAEKSSLEANAKREADAEALIAQMMGVDKKDLAQSSLTTQAPIPINNDTSKLTDDNA
                     STDLQAAAAMDVRLQFILDNISTKFSQAANAFKEKNYQTSKDFLNDALFSDYRNTKVE
                     ILVNKFTKAGNDQKIQQAIRTLIRQINDAKIDEKGLRDGLDNIEEQIFDVFLQIPNSE
                     LSSLQISGFNDETKGKDYAKVSNDIKLALDEILKNYDGFSASIVDDLQGIYLDIFEAS
                     GMENKIGAVDSGLKLKIESLFSKSVALIKASTDKKELEATFNDLEQLIASSVDKIQDS
                     TPYSLFIWALGIILREGLEALIIVVAIVSYLVQSGNKNRLNIAYSALFTGVILSFVTA
                     FGVSWLFKENAGQSRELIEGITMLIAVLLLFYVGFWLLSNAQNKKWTSFIKQGAIDAI
                     SNNSAKTLWITVFLAVYREGAETVLFYQALLFDAKTSTDFGAVFGGLGLGILILIVLY
                     FLLKAGAIRIPVKQFFYITSYIIFYMVFVFTGKGIAELIEGKVIIPSLIPMNFEPILW
                     LGIYPYYETLIPQFIVLIMLIIGILITKQISKKGVKS"
     gene            2044..2583
                     /locus_tag="RJ318_001626"
     CDS             2044..2583
                     /locus_tag="RJ318_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HDV7431459.1"
                     /translation="MIKKVLSVVAAAAVISTNLFAGEVPIGDPKELNGMEIAAVYLQP
                     IEMEPRGIDLAASLADIHLEADIHALKNNPNGFPEGFWMPYLTIAYELKNTDTGAIKR
                     GTLMPMVADDGPHYGANIAMEKDKKGGFGVGNYELTFYISNPEKQGFGRHVDEETGVG
                     KWFEPFKVDYKFKYTGTPK"
     gene            2666..>2883
                     /locus_tag="RJ318_001627"
     CDS             2666..>2883
                     /locus_tag="RJ318_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2318 domain-containing protein"
                     /protein_id="HDV7431460.1"
                     /translation="MSIYFVHFLISVLPLSILMAFITPNKKYIFKSFFVVFLGFLFGY
                     FAFFIAAQFLKTENLIFNFDFVFIGLLLV"
BASE COUNT          999 a          428 c          505 g          951 t
ORIGIN      
        1 atcaagctca gcttttgcta gggtagatga ttatattaat gaagcaaatc ttatcaaaga
       61 tatgctaaaa caaagcatag aaacttataa aaagggcgat aatctaggcg ccaaaaagct
      121 tagcgaagat gcgtattttc aacattttga aaatatggaa ggctcaatag gaagaaacat
      181 aggaagaaaa gctatcacta tggagcgtaa atttgtaaat ttgcgtcgca tgtataaaga
      241 tgaagctcct ttgacacaaa ttaatgcttt aattgatagt ctttattatg atcttgatga
      301 agtagctccg attttacaaa atggatatcg tttaaaagca gaagcaagcg atataaacta
      361 tgataaggct aaagctgaaa aatcaagcct agaagccaat gccaaacgcg aagctgatgc
      421 agaagcttta atcgcacaaa tgatgggtgt agataaaaaa gatttagcac aaagctcttt
      481 aaccacccaa gctcctatac ctataaataa tgatacaagc aaacttacag atgataatgc
      541 aagcactgat ttacaagctg ccgctgcaat ggacgtaaga ttgcaattta tactagataa
      601 tatctctacc aaattttcac aggcagctaa tgcttttaaa gaaaaaaact accaaactag
      661 taaagatttt ttaaatgatg ccttatttag tgattatcgc aataccaaag tagaaatttt
      721 agtaaataaa tttaccaaag caggaaacga tcaaaaaatt caacaagcca tacgcaccct
      781 tatacgccaa atcaacgatg caaaaataga tgaaaaaggc ttaagagatg gcttagataa
      841 catagaagaa caaatttttg atgttttctt acaaattcca aattcagaac tttcaagttt
      901 gcaaatttca ggctttaatg atgaaacaaa aggcaaagat tatgccaaag tttctaatga
      961 tatcaaactt gctttagatg aaattttaaa aaattatgat ggctttagtg cttctatagt
     1021 agatgattta caaggaattt atctagatat ttttgaagca agcggtatgg aaaataaaat
     1081 cggtgctgta gatagcggct taaaacttaa aatagaaagt ttattttcca aaagcgtagc
     1141 tcttatcaaa gcaagtacag ataaaaaaga gcttgaagct acttttaatg acttagaaca
     1201 actcatagcc agcagcgtgg ataaaattca agattctact ccttattcgc tgtttatatg
     1261 ggctttaggt attattttgc gtgaaggctt ggaagctttg attatcgttg tagccattgt
     1321 ttcttatctt gtgcaaagtg gcaacaaaaa tcgtttaaat atcgcctata gtgctctttt
     1381 tacaggagta attttaagtt ttgttaccgc ttttggagtt tcttggctat ttaaagaaaa
     1441 tgcaggacaa agtagagagc ttatagaggg tattaccatg cttatagccg tattactact
     1501 cttttatgtg ggcttttggc tactttcaaa cgcacaaaat aaaaaatgga caagctttat
     1561 caaacaaggt gctatagatg ctatatcaaa caatagtgca aaaacccttt ggattaccgt
     1621 atttttagct gtttatagag aaggtgcaga aactgtgctt ttttatcaag ccttgctttt
     1681 tgatgctaaa acaagcactg attttggtgc tgtttttggc ggacttggac ttggaatttt
     1741 aatacttatt gttttatatt ttcttttaaa agcaggagcc attcgcatac ctgtaaaaca
     1801 atttttctat atcacttctt acattatttt ttacatggtt tttgttttta caggcaaagg
     1861 catagccgaa ctcatagaag gaaaagtcat cattcctagt cttataccta tgaattttga
     1921 accgatttta tggcttggaa tttatcctta ctatgaaact ttaatccctc aatttatagt
     1981 tttaattatg ctaattattg gcattttaat aacaaaacaa atttcaaaaa aaggagtaaa
     2041 atcatgataa aaaaagtttt atcagtagtt gctgcagctg cggttattag tacaaattta
     2101 tttgcaggcg aagtgccgat cggcgatcca aaagaactta atggcatgga aatagccgct
     2161 gtttatttac aacctattga aatggagcca agaggtattg atttagctgc atctttagca
     2221 gatattcacc tagaagctga cattcacgca cttaaaaaca atccaaatgg ttttccagaa
     2281 ggtttttgga tgccttattt aactatagct tatgaactta aaaataccga cacaggtgca
     2341 attaaacgtg gaactttgat gcctatggtg gctgatgatg gtcctcacta tggtgcaaat
     2401 attgctatgg aaaaagataa aaaaggtggc tttggcgtag gaaattatga acttactttt
     2461 tatatctcaa atccagaaaa acaaggtttt ggacgccatg ttgatgaaga aacaggtgtg
     2521 ggtaagtggt ttgaaccttt taaagtagat tataaattca aatacacagg cacgccaaaa
     2581 taattttacg ctcggatttt ccgagtgttt gaatattttt atttttattt gaaaaattaa
     2641 aataacaatg tttaaagagt aaattatgag tatatatttt gtgcattttc ttatcagtgt
     2701 tttaccgcta agtattttaa tggcctttat cactcctaat aaaaaatata tttttaaaag
     2761 ttttttcgta gtttttttgg gctttttatt tggatatttt gcttttttta tcgcagcaca
     2821 atttttaaaa accgaaaatt taatctttaa ttttgatttt gtttttatag gtttattgct
     2881 agt
//
LOCUS       DAPIYB010000117         2867 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.118, whole genome shotgun sequence.
ACCESSION   DAPIYB010000117 DAPIYB010000000
VERSION     DAPIYB010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.118"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..764)
                     /locus_tag="RJ318_001628"
     CDS             complement(<1..764)
                     /locus_tag="RJ318_001628"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HDV7431461.1"
                     /translation="MENLYALILGIIEGLTEFLPISSTGHMILGTTILGIDIDEFWKS
                     FLIIIQLGSILAVIFVFWRKLFQGLDIWLKLAVGFFPTGVIGLFVAKYLNALFNGWVV
                     VGMLIFGGVVFILIELAHKNKQYRINSLEEISFKQAFCIGIFQSLAMIPGTSRSGASI
                     IGGLLLEFNRKVAAEFSFLLAIPTMIIATAYSIYKEPELLGNANSLIPLGIGFITAFI
                     VAVLVIKFFLKFISKFDFIPFGIYRIILGFVFFYLY"
     gene            complement(838..2835)
                     /locus_tag="RJ318_001629"
     CDS             complement(838..2835)
                     /locus_tag="RJ318_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HDV7431462.1"
                     /translation="MMYKKQNLPELTLRGLILGSILTIIFTASNVYLGLKVGLTFSSS
                     IPAVVISMAVLSLFKTSNILENNMVQTQASAAGTLSSVIFVIPGLFMCGYWSEFPLWQ
                     TFMICLCGGGLGVLFTIPLRRTMVVESKLAYPEGRAAAEILKVANKDQSSKKGKQGIK
                     EIALGSFIAAIFSLLSNGFKLAASESNFAFIWNKMAFGFSMGYSLALLGAGYLVGLAG
                     AIALFVGMFLAWGIFTPYLSNFEFDSTKNAVDLASSVWSSKVRLIGTGAIAIAALWTL
                     IELLKPVIEGIKEIVKNVKITNQEKNERTNIDLSLKSIFILFVLMVVGLFITFYSFVE
                     DANLSIYYQMLFSFVGTLVSVLIGFFVAAACGYMAGLVGSSSSPISGIGLIGVIISSI
                     VFLVLGVELFQDPMLSKFAVALAIFTTSVILATAAISNDNLQDLKTGHLVGATPWKQQ
                     VALLVGCVFGALAIVPVLNLLYQAYGFVGAMPREGMDASSALAAPQANLMSTIAQGIF
                     HHNIEWGYMAFGVFVGILMIIIDKILKGTQKMSLPPLAVGIGIYLPPAVNIPLVIGGI
                     LKYIVMQHLTKKYAKNSHKEEKLASCEQRGTLFASGLIVGESIFGVIIAGITVFSVSM
                     GGSENPLALNLANFHDSELFALIFFVGVVLYFIKRIVKKDA"
BASE COUNT         1128 a          556 c          368 g          815 t
ORIGIN      
        1 taatacaaat aaaagaaaac aaatcctaaa ataatacgat aaattccaaa agggataaag
       61 tcgaatttag aaataaattt taagaaaaat tttataacta aaactgcaac aataaaagca
      121 gtgataaaac ctatgcctaa aggaattaaa gaatttgcat tgccaagaag ctcaggctct
      181 ttataaatgc tataagctgt agcgataatc atcgttggaa tggcaagcaa aaaactaaac
      241 tcagccgcaa cttttctatt aaattctagc aaaagtccac caataatact tgctccactt
      301 cttgaagtac caggaatcat ggctaaagat tgaaaaatac ctatgcaaaa agcttgttta
      361 aaacttattt cttctaaaga attgatacga tattgtttat ttttatgtgc aagttctata
      421 agaataaaca caacaccgcc aaaaatgagc attccaacca caacccaacc attaaataaa
      481 gcatttaagt attttgccac aaaaagccct ataactccgg taggaaaaaa tccaactgca
      541 agttttaacc aaatatcaag cccttgaaac aatttacgcc aaaatacaaa aatgaccgcc
      601 aaaatagaac caagctggat gataatcaaa aagcttttcc aaaactcatc tatatcgata
      661 cctaaaatag tcgtacctaa aatcatatgt cctgttgaag aaataggtaa aaactcagtc
      721 agaccttcta taattccaag tattaaagca tataaatttt ccattttaat ccttgaatga
      781 taattgcaaa agaaaaatta tatcagaatg gattaaatgg ggttttaacc ccaaaaatta
      841 agcatctttt ttaacaatac gcttaatgaa atataataca actcccacaa aaaagataag
      901 tgcgaaaagc tcgctatcat gaaaatttgc taaatttaaa gctaaaggat tttcactacc
      961 acccatactt actgaaaata cagtaattcc tgcgataatt accccaaaaa tactttcacc
     1021 cactataagc cctgaagcaa aaagcgtgcc tctttgctca caacttgcaa gtttttcttc
     1081 tttatgagaa ttttttgcat attttttagt caagtgttgc attacaatat attttaaaat
     1141 tccgcctata actaaaggta tatttacagc agggggaagg taaataccta ttccaacggc
     1201 taaaggcggc aaagacattt tctgtgttcc ttttaaaatt ttatctataa taatcattaa
     1261 aattcctaca aatacaccaa aagccatata accccactct atattgtgat gaaaaattcc
     1321 ttgggcgata gtgctcatta aatttgcttg cggtgctgct aaagctgatg aagcatccat
     1381 accttctctt ggcattgctc cgacaaaacc ataggcttga taaagcaaat ttaaaacagg
     1441 aactatagcc aaagcaccaa aaacacagcc tacaagtaaa gcaacttgtt gtttccaagg
     1501 agtagctccg actaaatgtc ctgtctttaa atcttgtaaa ttatcattcg aaatagcagc
     1561 tgtagctaaa ataacactag tagtaaaaat agctaatgct actgcaaatt tagaaagcat
     1621 aggatcttga aaaagttcca cacctaaaac caaaaaaaca atagaagaaa taataacacc
     1681 aataagtccg attccagaaa taggactaga agaagatcct acaagtcctg ccatatatcc
     1741 gcaagctgct gcaacaaaaa aacctattaa aacagaaact aaagttccaa caaatgaaaa
     1801 tagcatttga taataaatac ttaagttagc atcttcaaca aaactataaa aagtaataaa
     1861 taaacccaca accattaaaa caaaaagtat aaaaatactt tttaaagaaa ggtctatatt
     1921 tgttctttca tttttttctt gattagtaat tttaacattt ttaacaattt ctttaatacc
     1981 ctcaataacg ggttttaaaa gttctattaa agtccaaagc gctgctatag caatagctcc
     2041 tgttcctata agccttactt tagaactcca tacactagaa gctaaatcta cggcattttt
     2101 tgtactatcg aattcaaaat ttgaaagata gggagtaaaa ataccccaag ctaaaaacat
     2161 acctacaaaa agagctatag cacctgctaa accaactaaa taacctgccc ctaaaagtgc
     2221 caaagaatat cccatagaaa aaccaaaagc cattttattc caaataaaag caaaattact
     2281 ctcacttgca gcgagtttaa aaccattgct taacaaacta aaaatagcag ctataaaaga
     2341 gcctaatgct atttctttaa tgccttgttt tcctttttta ctactctgat ctttattggc
     2401 tacttttaaa atttcagctg cggctctacc ttcaggataa gcaagcttgc tttcaaccac
     2461 catagtcctt cttaatggta tagtaaaaag cactccaagt ccgccaccac aaagacatat
     2521 cataaaagtt tgccaaagtg gaaattcact ccaataccca cacataaaaa gccctgggat
     2581 aacaaaaata actgatgata aagttcctgc tgctgaagct tgagtttgaa ccatattatt
     2641 ttctaaaata tttgaagtct taaaaagact caaaaccgcc atggagatga ccacagctgg
     2701 aattgatgat gaaaaagtaa gtcccacttt taaccccaaa tatacatttg aagctgtaaa
     2761 aataatagtt aaaatacttc ccaaaatcaa accccttaag gtaagttctg gtaaattttg
     2821 ttttttgtac atcatttctc cgttttaaaa tttactttca acttaaa
//
LOCUS       DAPIYB010000118         2749 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.119, whole genome shotgun sequence.
ACCESSION   DAPIYB010000118 DAPIYB010000000
VERSION     DAPIYB010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.119"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            24..1046
                     /locus_tag="RJ318_001630"
     CDS             24..1046
                     /locus_tag="RJ318_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDV7431463.1"
                     /translation="MNLSFKIFDISNTQRSKAKKVQGKKYEIFLNENEHSLITPKVSF
                     KEILRYYYLYPKNAIPSFKLPFFKPDLSGFSTPHITWLGHSSLFISFKEYKILIDPIF
                     NTHASPISFINKAFKNAPVYNINDFNEIFAVIITHSHFDHLDAKSVKALKDKAKFFIT
                     PLKVGNYLKSYGVSEKKIIELDWWSGIEFGDLKIMATPAQHSSSRGDGKNKTLWASFV
                     MEFLSVDKRVFFSADGGYFTHFKKIGEYFGSFDLACLESGQFNIAWPYSHSFPEQILK
                     EAKDLNAKAVMPIHWGRFLAGTHAWNEVVKFLYENLDLPLITPKMGEAYEVGAKFKQD
                     FWWKEE"
     gene            1116..1457
                     /locus_tag="RJ318_001631"
     CDS             1116..1457
                     /locus_tag="RJ318_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDV7431464.1"
                     /translation="MKIIQWNGAEFSPKEVKINVLIDNEKGKEIQILLAKDSVMKEHK
                     APFAIHVQVLSGKIWFEVEKEKFELNALDMISLEANVAHSLGGLENSIIRLSLNKSDS
                     VQRVNAVLKKP"
     gene            complement(1507..2676)
                     /locus_tag="RJ318_001632"
     CDS             complement(1507..2676)
                     /locus_tag="RJ318_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDV7431465.1"
                     /translation="MLTKRSQVLEESITLAITALANELKAKGEDIISFSAGEPDFDTP
                     QTIKNAAISAIEKGCGKYTAVAGIPEVLKAIQTKFKKDNNLDYETNEIITNVGAKHSL
                     FECIECLVEKDDEVIIPSPYWVSYPEMVKFAGGKPVFIEGLEENGFKITAEQLKKAIT
                     AKTKVLMLNSPSNPVGSIYSKEELTQIAKVLEGTQITVLSDEMYEKLRYDGFDFVAFA
                     SVSKDALKRTVTINGLSKCGAMPGWRFGYMASKNKALISAVKRLQGQSTSNICSITQH
                     AAIPALNGECDKDIEKMRQAFEKRRNLALDILKQIPNISVYKPEGAFYLFVNIQKIEK
                     DSMKFCQKLLEQEKVAVVPGVGFGMDGYFRLSYATSDELIKKGLERIANFIKNYK"
BASE COUNT          899 a          401 c          468 g          981 t
ORIGIN      
        1 ttaataaaca taaaaggaaa aatttgaatt tatcatttaa aatctttgat atttccaata
       61 cacaacgatc aaaagctaaa aaagtgcagg gtaaaaaata tgaaattttt cttaatgaaa
      121 atgagcacag tcttataact cctaaagtgt cttttaaaga aattttgagg tattattatc
      181 tttatccaaa aaatgccatc ccttctttta agttaccttt tttcaagcct gatttgagtg
      241 gttttagcac cccacatatt acttggcttg gccattcttc gctttttata agttttaaag
      301 agtataaaat tttgattgat cctattttta acactcatgc ttcgcccatt tcttttatca
      361 acaaggcttt taaaaatgct cctgtttata atataaatga ttttaatgaa atttttgctg
      421 tgattatcac gcattcgcat tttgatcatt tagatgctaa gagtgtaaaa gctttaaaag
      481 ataaggctaa attttttatc actcctttaa aagtgggaaa ttatctaaaa agctatgggg
      541 tgagcgagaa aaaaatcata gagcttgatt ggtggagtgg aatagaattt ggtgatttaa
      601 aaatcatggc aacacctgca cagcacagtt caagtagggg agatggtaaa aacaaaaccc
      661 tttgggcttc ttttgtgatg gaatttttaa gtgtagataa gagagtgttt tttagcgcag
      721 atggagggta ttttacacat tttaaaaaaa taggtgagta ttttggaagt tttgacctag
      781 cttgtcttga aagcggacaa tttaatatcg cttggccata ttcacactct tttcctgagc
      841 aaattttaaa agaggcaaaa gatcttaatg caaaggctgt catgcctata cattggggga
      901 gatttttagc aggaactcat gcatggaatg aggtggtaaa atttctttat gaaaatttag
      961 atttacccct tatcacacca aaaatgggcg aggcttatga agtaggagct aaatttaaac
     1021 aggatttttg gtggaaagaa gaataaatta acacaagttt ataatttata ttttggcttt
     1081 tgctatagtt ttgtaaaact aaaaaaggag attttgtgaa aatcattcaa tggaatggag
     1141 cggaatttag cccaaaagaa gtgaaaatca atgttttaat tgacaatgaa aaaggtaaag
     1201 aaattcaaat tttattagct aaagacagtg tgatgaaaga gcataaagct ccttttgcta
     1261 tacatgttca agttttaagc ggtaaaattt ggtttgaagt ggaaaaggaa aaatttgaat
     1321 taaatgcttt agatatgata agcctagagg caaatgtagc acattcttta ggtggattag
     1381 aaaattctat aataagattg agtttaaata aatcagatag tgttcaaagg gtaaatgctg
     1441 tgcttaaaaa gccttgattt tataaggttt taatttgcct aaataattct aggctttaac
     1501 ctagaattat ttatagtttt taatgaaatt tgctattctt tctaaacctt ttttgataag
     1561 ctcatcgctt gtagcataag aaagtctgaa gtatccatcc attccaaaac ctacacctgg
     1621 aacaacggca actttttctt gttcaagtaa cttttgacaa aatttcatag aatctttttc
     1681 tattttttgt atatttacaa aaagataaaa agcaccttct ggtttataaa cactgatatt
     1741 tgggatttgt ttaagtatgt ctaaggctaa gttacggcgt ttttcaaagg cttgacgcat
     1801 tttttctata tctttatcac attctccatt taaagcagga atggctgcat gttgagtgat
     1861 agagcaaata tttgaagtgc tttgtccttg aagtctttta acggctgaaa ttagggcttt
     1921 atttttgctt gccatatagc caaaacgcca tcctggcata gctccacatt tgctaagtcc
     1981 gttaatggtc acagtgcgtt ttaaagcatc tttgcttaca cttgcaaaag ctacaaaatc
     2041 aaaaccatca tagcgaagtt tttcatacat ttcatcactt aaaacagtaa tttgcgttcc
     2101 ttctaaaact ttagcaattt gagttaattc ttctttagaa taaatcgatc ccacaggatt
     2161 tgaaggagaa tttagcatca aaactttggt tttagctgtg atagcttttt ttaattgttc
     2221 agcggtaatt ttaaagccat tttcttctaa gccttctata aatacaggtt ttccacctgc
     2281 aaattttacc atttcaggat agcttaccca gtaaggacta gggataatca cttcatcatc
     2341 tttttctact aagcattcta tacattcaaa aagagagtgt tttgcgccta cattggtgat
     2401 gatttcattt gtttcataat caagattatt atctttttta aatttggttt gaatagcttt
     2461 taatacttca ggaattcctg caacagcagt gtattttcca catccttttt caatagcact
     2521 tatagcggca tttttgatgg tttgtggtgt gtcaaaatca ggttcacccg ctgaaaaact
     2581 aatgatatcc tcgcctttgg ctttaagttc attggcaagt gcagtgatag ctaaagtgat
     2641 agattcttct aaaacttgag atctttttgt aagcattttt caatccttga taatttttgt
     2701 ttaattttag cagaaaattg catttttaca ataaatttaa tttaaaaat
//
LOCUS       DAPIYB010000119         2610 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.120, whole genome shotgun sequence.
ACCESSION   DAPIYB010000119 DAPIYB010000000
VERSION     DAPIYB010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2610
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.120"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            7..1431
                     /locus_tag="RJ318_001633"
     CDS             7..1431
                     /locus_tag="RJ318_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDV7431466.1"
                     /translation="MKKLTNDFGNIIADNQNSLSAGAKGPLLMQDYLLLEKLAHQNRE
                     RIPERTVHAKGSGAYGEIKITADLSAYTKAKIFQKGEVTPLFLRFSTVAGEAGAADAE
                     RDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWD
                     FWSLCPESLHQVTILMSDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTQQGI
                     KNLTNQEAAELIAKDRESHQRDLYNAIENKDFPKWKVQVQILAEKDIEKLGFNPFDLT
                     KIWPHSFVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSY
                     PDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDK
                     SYLEPDLVLEGVAQRYAPLDNDFYTQPRALFNLMNDDQKTQLFHNIAASMEGVDEKII
                     TRALKHFEKISPDYAKGIKKALEK"
     gene            1488..1958
                     /locus_tag="RJ318_001634"
     CDS             1488..1958
                     /locus_tag="RJ318_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cj1386 family hemin-binding protein"
                     /protein_id="HDV7431467.1"
                     /translation="MTTLSLEEEKRFEELCKMAFNFARNNECENLKIMIEAGLNVNLK
                     THKGDSLLMLAAYNNSYESAKMLLEKGAKVDEKNDRGQTPLAGVCFKGYLPMCELLVK
                     YGANIDENNGLGMTPYTFAIMFGRKDVAEFLLKKSKNNFLKKISLKILKFIKKF"
     gene            complement(1959..2582)
                     /locus_tag="RJ318_001635"
     CDS             complement(1959..2582)
                     /locus_tag="RJ318_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002855631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV7431468.1"
                     /translation="MTYFLGEVLGEQYEIVFHVITEDGAYIAAIANSHISGRSLDSPL
                     TAFASELMQNKKYLEKDFLCDYKALVGKSKLIRGSTFFIKNHDKLVGILCINHDTSIM
                     RDLICKMIDLEKIGDMGDILGNISFSQNDSSIETLSHSIEDILVQSVDSSYLNSDYQL
                     SITQKEEIAEKLYEKGIFNIKGAVPIVAKFLKISEPSVYRYLKKFKK"
BASE COUNT          978 a          401 c          397 g          834 t
ORIGIN      
        1 aaaacaatga aaaaattgac taacgatttt ggaaacatta tagctgataa ccaaaattca
       61 ttaagcgcag gcgcaaaagg acctttactt atgcaagatt atcttttgct tgaaaaactt
      121 gctcatcaaa atagagaaag aattccagaa agaaccgttc atgctaaggg aagtggagct
      181 tatggcgaaa taaaaattac agcagactta agtgcttata ccaaagctaa aatttttcaa
      241 aaaggcgaag ttactccatt atttttacgc ttttcaacag tagcaggtga agcaggtgca
      301 gcagatgctg aacgcgatgt gagaggtttt gctattaaat tttacactaa agaaggaaac
      361 tgggacttgg taggaaataa cactccgaca ttcttcatcc gcgatgctta taaattccct
      421 gatttcatcc atactcaaaa aagagatcca agaactcatc taagaagtaa taatgctgct
      481 tgggattttt ggagtttatg tcctgaaagt ttacatcaag taaccattct tatgagcgat
      541 agaggaattc ctgcaagtta tcgtcatatg catggatttg gaagccatac ttatagtttt
      601 attaatgata aaaatgaaag attttgggtg aaattccatt ttaaaaccca acaagggatt
      661 aaaaatctta ccaaccaaga agctgccgag cttatagcaa aagatagaga aagtcatcaa
      721 agagatctct ataatgctat agaaaataaa gattttccaa aatggaaagt tcaagttcaa
      781 attcttgctg aaaaagatat agaaaaactt ggatttaatc cttttgattt aacaaaaatt
      841 tggcctcata gttttgtacc tttgatggat ataggcgaaa tgattctaaa caaaaatcct
      901 caaaattatt ttaatgaagt tgaacaagct gcctttagtc caagcaatat cgttcctgga
      961 attggcttta gccctgataa aatgttgcaa gctagaattt tttcatatcc tgatgcacaa
     1021 agatatagaa taggaactaa ttatcatctt ttaccagtaa atcgtgcaaa aagcgaagtg
     1081 aatacttaca atgtcgctgg tgctatgaat tttgatagtt ataaaaatga tgctgcttat
     1141 tatgaaccaa acagctatga taatagccca aaagaagaca aaagctatct tgaacctgat
     1201 ttagtcttag aaggcgtagc acaaagatat gctccactag ataatgactt ttatactcaa
     1261 ccaagagctt tatttaatct tatgaatgat gatcaaaaaa ctcaactttt tcataatatc
     1321 gccgcttcta tggaaggagt tgatgaaaaa attatcacta gagctttaaa acattttgaa
     1381 aaaatttcac ctgattatgc aaaaggaatt aaaaaagctt tagaaaaata atttttactt
     1441 gccacttttg gtggcaaact aaagattata ataattaagg aaaaacaatg acaactctta
     1501 gtttagaaga agaaaaaaga tttgaagagc tttgcaaaat ggcttttaat tttgcaagaa
     1561 ataatgaatg tgaaaatctt aaaatcatga tagaagcagg tttaaatgta aatttaaaaa
     1621 ctcataaagg cgatagcttg cttatgcttg cagcttataa taattcttat gaaagcgcta
     1681 aaatgctttt agaaaaaggt gcaaaagtag atgaaaaaaa cgatcgtgga caaaccccat
     1741 tagcgggagt ttgttttaaa ggatacttac ctatgtgtga acttttagtt aaatatggag
     1801 caaatattga tgaaaacaat ggtttaggaa tgacacctta tacttttgct attatgtttg
     1861 gacgcaaaga tgtggcagaa tttttactca aaaaatctaa aaataatttt ttaaagaaaa
     1921 taagcctaaa aatactaaaa tttatcaaaa aattttagtt attttttaaa tttcttcaga
     1981 tacctataga cactaggttc tgaaattttt aaaaattttg ctacgatagg aaccgcccct
     2041 tttatattaa aaataccttt ttcatatagc ttttcagcaa tttcttcttt ttgagtaatg
     2101 cttaattgat aatcagaatt taaataacta gaatctacgc tttgaactaa aatatcctct
     2161 atcgagtgac ttaatgtttc tatacttgaa tcattttgag aaaaactaat atttcctaaa
     2221 atatcaccca tatctccaat tttttctaaa tcaatcatct tgcatattaa atctctcata
     2281 atgctagtat catgattgat acacaaaata cctactaatt tgtcatgatt tttaataaaa
     2341 aaagtagatc ctctaattaa ttttgatttt ccaacaagag ccttataatc acataaaaaa
     2401 tctttttcta aatatttttt attttgcata agctcacttg caaaagcagt caagggagaa
     2461 tctaaacttc ttccactaat atgactgtta gcaattgctg caatataggc cccatcttca
     2521 gtaattacat gaaaaactat ctcatattgc tcacctaaaa cttctcctaa aaaatatgtc
     2581 aactttataa attgttgttt ttgtccctca
//
LOCUS       DAPIYB010000120         2411 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.121, whole genome shotgun sequence.
ACCESSION   DAPIYB010000120 DAPIYB010000000
VERSION     DAPIYB010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.121"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..321
                     /locus_tag="RJ318_001636"
     CDS             <1..321
                     /locus_tag="RJ318_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2,3 sialyltransferase"
                     /protein_id="HDV7431469.1"
                     /translation="FINHSMACDLQALDYLMKRYDVNIYSLNSDEYFKLAPDIGSDFV
                     LSKKPKKYINDILIPDKYAQERYYGKKSRLKENLHYKLIKDLIRLPSDIKHYLKEKYA
                     NKNR"
     gene            302..1333
                     /gene="neuB1"
                     /locus_tag="RJ318_001637"
     CDS             302..1333
                     /gene="neuB1"
                     /locus_tag="RJ318_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialic acid synthase"
                     /protein_id="HDV7431470.1"
                     /translation="MQIKIDKLTISQKNPLIIPEIGINHNGSLEIAKLMVDAAKRAGA
                     KIIKHQTHIVEDEMSQEAKNVIPGNANISIYEIMEQCALNYKDELALKEYVEKQGLVY
                     LSTPFSRAAANRLEDMGVSAYKIGSGECNNYPLIKHIAQFKKPMIISTGMNSIESIKP
                     TVKILRDYEIPFVLLHTTNLYPTPSHLVRLQAMLELYKEFNCLYGLSDHTTNNLACIG
                     AIALGASVLERHFTDTMDRKGPDIVCSMDESTLKDLINQTQEMVLLRGDNNKNPLKEE
                     QVTIDFAFASVVSIKDIKKGEILSMDNIWVKRPSKGGISAKDFEAILGKRAKKDIKNN
                     IQLTWDDFE"
     gene            1330..>2411
                     /gene="neuC"
                     /locus_tag="RJ318_001638"
     CDS             1330..>2411
                     /gene="neuC"
                     /locus_tag="RJ318_001638"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HDV7431471.1"
                     /translation="MKKIVFVSGTRADFSKIKSLMMKVENSNEFELFIFVTGMHMSKK
                     FGSTYMEIEKCGFKNIYKYINHDKYYQMDKALSSTIDGFSKFIHEIEPDLIVVHGDRV
                     EPLAAAIVGSLNNILVAHIEGGELSGTIDESLRHAISKLAHIHLVNDEIAKKRLIQMG
                     EDEKSIFIIGSPDLELLNNTISLDEAKKYYDIKFKNYAIAIFHPITTEINSLYKQSEE
                     FVNALIKSEKNYIVIYPNNDLGFELILQNYERLKNNERFKIFPSLRFEYFISLLKNAN
                     FIIGNSSCIIKEALYLNINGILVGSRQDGRTDINKTIRVNAEEKDILEAILNTSKCTN
                     ITNKRLEILNSSEQFYRLLKNNILFT"
BASE COUNT          996 a          256 c          403 g          756 t
ORIGIN      
        1 tttatcaatc attcaatggc atgtgattta caagctttag attatctaat gaaaaggtat
       61 gatgtgaata tttatagttt aaattcagat gagtatttta aattggctcc ggatattgga
      121 agtgattttg tattgagtaa aaaaccaaaa aaatatataa atgatatatt gataccagat
      181 aagtatgcac aagaaagata ttatggaaaa aaaagtaggt taaaagaaaa tctccattat
      241 aagctaataa aagatctaat tagacttcca agtgacataa aacactactt aaaggaaaaa
      301 tatgcaaata aaaatagata aattaactat ttctcagaaa aatcctttga taatccctga
      361 aataggtata aatcacaatg gtagtttaga aatagcaaaa cttatggtag atgcggccaa
      421 aagagcagga gctaagataa taaaacacca aactcatata gtcgaagatg aaatgagcca
      481 agaggctaaa aatgttatac cgggtaatgc aaatattagc atttatgaga ttatggaaca
      541 atgtgcatta aactataaag atgaactagc tttaaaagag tatgtagaga agcaaggttt
      601 ggtatatctt agcactccat ttagtagagc tgcagcaaat cgtttagaag atatgggtgt
      661 aagtgcttat aaaataggct caggtgaatg taataattat cctttaataa aacatatagc
      721 acaatttaaa aaacctatga ttataagcac cggaatgaat agcatagaaa gtataaaacc
      781 cacagttaag atacttagag attatgaaat accttttgtt ttgcttcata ctacaaattt
      841 atatcctact ccatcgcact tagtaagatt acaagctatg ttagaattat ataaagagtt
      901 taattgtctt tatggactta gtgatcatac cacaaacaat cttgcatgta taggtgcaat
      961 agctcttgga gcaagtgtac tagaaagaca ctttacagat accatggaca gaaaaggccc
     1021 tgatatagtt tgctctatgg atgaaagcac tttaaaagat cttataaatc aaacacaaga
     1081 aatggtgctt ttaagaggcg ataataataa aaatccttta aaagaagagc aagtgaccat
     1141 tgattttgca tttgctagtg tagtaagtat taaagatata aaaaagggtg aaattttatc
     1201 tatggataat atttgggtaa aaagaccttc aaaaggtggt ataagtgcaa aggattttga
     1261 agccatactt ggaaaaagag caaaaaaaga tataaaaaat aatatacaac taacatggga
     1321 tgattttgaa tgaaaaaaat agtttttgtt agcggaacta gagctgattt ttctaaaata
     1381 aaatctctaa tgatgaaagt tgaaaattca aatgaatttg aattatttat atttgtaacc
     1441 ggtatgcata tgagtaaaaa gtttggttct acttatatgg aaatagaaaa atgtggtttt
     1501 aaaaatatat ataaatatat aaatcacgat aagtattatc agatggataa ggctttatca
     1561 tcaacaatag atggtttttc taaatttata catgagatag agcctgattt aatagtagtg
     1621 catggtgata gagtggagcc tttagctgct gctatagtag gaagtttaaa taatatctta
     1681 gtggcacata tagaaggcgg agagctttca ggaactatag atgagagttt aagacatgct
     1741 attagtaaat tagcacatat tcatttagta aatgatgaaa tagcaaaaaa aagattaata
     1801 caaatgggtg aagatgagaa atctattttt attataggtt ctcctgattt agaattgcta
     1861 aataatacta tatctttaga tgaagcaaaa aaatattatg atataaaatt taaaaattat
     1921 gccatagcta tatttcatcc aattacaacc gaaataaact ctttatataa acaaagtgaa
     1981 gaatttgtaa atgctcttat aaaaagtgaa aaaaattata tagttattta tccaaataat
     2041 gatttaggat ttgaattaat tttgcaaaat tatgaaaggc taaaaaataa tgaaagattt
     2101 aaaatttttc cttctttaag atttgagtat tttataagtt tgctaaaaaa tgccaatttt
     2161 atcataggaa attcaagttg tataataaaa gaagctttat atcttaatat aaatggaatt
     2221 ttagttggtt caagacaaga tggtagaact gacattaata aaacaataag agtaaatgca
     2281 gaggaaaagg atatattgga agcgatttta aatactagta aatgcactaa tattacaaat
     2341 aaaagactag aaattttaaa tagttctgag caattttata ggttattgaa aaataatatt
     2401 ttatttacta t
//
LOCUS       DAPIYB010000121         2404 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.122, whole genome shotgun sequence.
ACCESSION   DAPIYB010000121 DAPIYB010000000
VERSION     DAPIYB010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.122"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            5..937
                     /gene="rsmH"
                     /locus_tag="RJ318_001639"
     CDS             5..937
                     /gene="rsmH"
                     /locus_tag="RJ318_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004305556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDV7431472.1"
                     /translation="MEIPHIPVLLNEVQEIFKNLKTGYFLDCTLGFGGHSEALLKNHP
                     DLKFIACDQDQQALKFSKKRLKDFRNRITFMQSNFSEVLEKISHKEELRGILADIGVS
                     SFQLDNNERGFSVNSDFLDMRMNQNSKISAYEIINTYTKEQLTSIFKDYGELHDAHFI
                     AEKICLERSKNPIKSAKELYQIIGKGKQNHRKISKATLAFQAIRIEVNQELKVLKDFL
                     EHLENLKPKNCILAIISFHSLEDRIVKQFFKKWSKNCICNEKIMRCECGNNHSLGQII
                     TKKAISASKEELLKNSRSSCAKMRAFYFNNLDNK"
     gene            937..1875
                     /locus_tag="RJ318_001640"
     CDS             937..1875
                     /locus_tag="RJ318_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431473.1"
                     /translation="MLEDDFIKERQNIRQKMLKFSRAINQGKPLDDDLRDEISSDDIL
                     RRRFKKKTPNKFLEELDEEYESKHTKKSNIYLKEDLINVKLEEKQSLAKKIFSKMKER
                     RKEENKKTKKNFLFSRKKANEIKNIQTKTQIQTKSNQATTQTKQEKKELTNSIEKIQK
                     TETKIQKPLIIEKKLDVKNQPNIKKSLENLQKKITPQENKQELPKPSNQAQEKQQNDE
                     DAQKAKNILLEGFSNATKEDRNLNFNHLLFAALLVSFALFLFAPQIYIRNQIYYLSRE
                     IATLRTEESVLNEENKDLKRRLENMRFQNQILDYLE"
     gene            complement(1863..2354)
                     /locus_tag="RJ318_001641"
     CDS             complement(1863..2354)
                     /locus_tag="RJ318_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431474.1"
                     /translation="MKKFKEFSLRFLFKVSEQPVLIRDLLEANALFNDGMLVDPSKLN
                     FNFKILNSYIYFGVFCAVILLPLLLITHYFLTKLDFHISIVSAVMVTACVFIGYDIFK
                     VYTRKIISKKIIQKAWALHFPYFAYEKYSTMAGEFYKEALKEEIPKANLEQYVLDKII
                     HSK"
BASE COUNT         1043 a          332 c          313 g          716 t
ORIGIN      
        1 gattttggaa attcctcata tcccagtttt acttaatgaa gttcaagaga tttttaaaaa
       61 tcttaaaaca ggttattttt tagactgcac tttaggattt ggcggacata gtgaagcttt
      121 gcttaaaaat catcctgatc ttaaattcat tgcttgtgat caagatcaac aagctttaaa
      181 attttctaaa aaacgtctta aagattttcg caataggata acttttatgc aaagtaattt
      241 tagtgaagtt ttagaaaaaa tttcacataa agaagaatta agaggtattt tagcagacat
      301 tggagtttct tcatttcagc ttgataataa cgaaagaggt tttagtgtaa attctgactt
      361 tttggatatg agaatgaatc aaaactccaa aatatcagct tatgagatta ttaatactta
      421 tacaaaagag caattaactt ccatttttaa agattatgga gaattacatg atgcacattt
      481 tattgctgaa aaaatttgcc tagaaagaag taaaaatcca atcaaaagcg ccaaagagct
      541 ttatcaaatc ataggaaaag gtaaacaaaa tcatagaaaa atttccaaag ctactttagc
      601 atttcaagcc attagaatag aagtaaatca agaacttaaa gtgcttaaag attttcttga
      661 acatttagaa aatttaaaac caaaaaattg cattttagct atcattagct ttcattcttt
      721 agaagataga atagtaaaac aatttttcaa aaaatggtca aaaaactgca tttgtaatga
      781 aaaaataatg cgttgcgaat gtggaaataa ccatagccta ggacaaataa taactaaaaa
      841 agctataagt gcgagcaagg aagaactttt aaaaaattct cgctctagtt gtgctaaaat
      901 gcgggctttt tattttaata atttggacaa taaataatgc tagaagatga ttttataaaa
      961 gaacgccaaa acatacgcca aaaaatgctg aaattttctc gcgccataaa tcaaggcaaa
     1021 ccgcttgatg atgatttaag agatgaaatt tctagcgatg atattttaag acgtcgtttt
     1081 aaaaaaaaga ctcctaataa attcttagaa gaactcgatg aagagtatga gtcaaaacat
     1141 actaaaaaat caaatatata tttaaaagaa gatctaatca atgttaaatt agaagaaaag
     1201 caatctcttg ctaaaaaaat tttttccaaa atgaaagaaa gaagaaaaga agaaaataaa
     1261 aaaactaaaa aaaatttttt atttagcaga aaaaaagcaa acgaaataaa aaatatccaa
     1321 accaaaacac aaattcaaac aaaaagcaat caagctacca ctcaaacaaa acaagaaaaa
     1381 aaggaactta caaattctat agaaaaaatt caaaaaacag aaactaaaat acaaaaacct
     1441 ctaattatag aaaaaaaact agatgttaaa aatcaaccta atatcaagaa aagtttagaa
     1501 aatttacaaa aaaaaataac accacaagaa aataaacaag aacttccaaa accatctaat
     1561 caagctcaag aaaaacaaca aaatgatgaa gatgctcaaa aggcaaaaaa tattttacta
     1621 gaaggcttct ctaatgctac caaagaagat agaaacctaa acttcaatca tcttcttttt
     1681 gcagctttac ttgttagttt tgcattattt ttatttgccc cacaaattta tattagaaat
     1741 caaatttatt atcttagtag agagattgct acattaagaa cagaagaaag tgttttaaac
     1801 gaggaaaata aagacttaaa aagaagactt gaaaatatgc gattccaaaa tcaaatttta
     1861 gattatttag aatgaataat cttatctaaa acatactgct ctaaatttgc ttttggaatt
     1921 tcttctttta aagcttcttt ataaaattca cccgccattg tagagtactt ttcataagca
     1981 aaataaggaa agtgtaaagc ccaggctttt tgtattattt tttttgagat tattttgcga
     2041 gtataaactt taaaaatatc atatcctata aatacacaag cagtaaccat aacagcgctc
     2101 actatgctta tatgaaagtc aagctttgtt aaaaaataat gagtaatcaa aagcaatggc
     2161 aataaaatca cagcgcaaaa aacaccaaaa taaatataag aatttagaat tttgaaatta
     2221 aaatttagct tagaaggatc tacaagcatt ccatcgttaa aaagtgcatt tgcctctaat
     2281 aaatctctta taagaacagg ttgctctgat actttaaata aaaaacgaag gctaaattct
     2341 ttaaattttt tcataatcca cgctttattt tttaattaaa attttatcca aagaaaatta
     2401 attc
//
LOCUS       DAPIYB010000122         2120 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.123, whole genome shotgun sequence.
ACCESSION   DAPIYB010000122 DAPIYB010000000
VERSION     DAPIYB010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.123"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            185..1801
                     /locus_tag="RJ318_001642"
     CDS             185..1801
                     /locus_tag="RJ318_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDV7431475.1"
                     /translation="MLFDKKALQNFELIGEIKNLQEYLKNNPNLLIKGNNLLVLHSLK
                     KLYANKIKLIYIDPPYNTGNDSFGYNDKFKHSTWLTFMKNRLEIAKEFLRDDGVIFVQ
                     CDDNEQAYLKVLMDEIFGRDNFVNSIAVKLKNIAGASGGGEDKRFKKNIEYILIYGKS
                     YEKLEQFKSVYDSRELYSHISFCKENNISWKYTSALLNGGEKKLIATTLDGDGNEIKI
                     FERINYDIKSIGQMIKDFKMNEKEIFYHYVNKIFRTTMPQSSIRVRVLEKLKELNLSP
                     YLISIEYTPKSGRNKGVVYEQFYNGEKLNLFAWLKDVVEIKDKQIFKKELAGTLWDFA
                     FAMTNLTKEGDTQFSNAKKPEALLQRIIEISTNENDIVMDFFAGSGTTLAVAHKMKRK
                     WIGIEQMDYIETITKERLKKVIEGEQGGISKAINWQGGGNFVYAELMPLNAIYKEKIQ
                     NLNDEKELDNIYQELKTKAFLDYRVDINEILKDKEFENLDLESKKEILKLVLDSNMDY
                     LLYGDIKDEDYALSKEIIKLNKIFYGDENV"
     gene            1794..>2120
                     /locus_tag="RJ318_001643"
     CDS             1794..>2120
                     /locus_tag="RJ318_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDV7431476.1"
                     /translation="MFNKKLHELLQEEFGKRGIEQIEIPFYVKENLSKELRIYQEKAL
                     KYYYANSDSIKQRHLMFNMATGSGKTLIMAALILDCYNKGYRNFIFFVNSTSILEKTK
                     ANFANKY"
BASE COUNT          916 a          204 c          342 g          658 t
ORIGIN      
        1 ctttacaagc tatgctaaca aaataggact tgcaaataaa acaaaatctc ttttaaaaac
       61 aaataacgaa gtagtattaa attttgcttt taaagatggc attataaaag gcggacaaag
      121 taaagatgag caaaaaacac aagagatatt tttcaatgaa atactagctc atgatgaaat
      181 agatgtgtta tttgataaaa aagctttgca gaattttgaa ctaataggtg aaataaaaaa
      241 tttacaagaa tatttaaaaa ataatccaaa tttgctcata aaaggcaata atttactagt
      301 gttacattct ttaaaaaagc tttatgcaaa taaaataaaa ttaatctaca ttgatccacc
      361 ttataatacg ggtaatgata gttttggtta taatgacaaa tttaaacact ctacttggct
      421 tacttttatg aaaaatcgcc ttgaaattgc taaggaattt ttaagagatg atggtgtgat
      481 ttttgtgcaa tgtgatgata atgaacaagc atatttaaaa gtacttatgg atgagatttt
      541 tggaagagat aattttgtaa atagtatagc tgttaaatta aaaaatattg caggagcaag
      601 tggaggagga gaagataaaa gatttaagaa aaatatagag tatattttaa tttatggtaa
      661 aagttatgaa aaattagaac aatttaaatc tgtatatgat tctagagaat tgtattctca
      721 tataagtttt tgtaaagaaa ataatattag ttggaaatat acttcggctc tactcaatgg
      781 cggtgaaaaa aagttaatag ctacaacact tgatggtgat ggcaatgaaa ttaaaatttt
      841 tgaaagaatt aattatgata taaaatccat aggacaaatg ataaaagatt ttaaaatgaa
      901 tgagaaagaa attttttatc attatgtaaa taaaattttt agaaccacga tgccacaaag
      961 ttcaattaga gtgagagttc ttgaaaaatt aaaagaatta aatttaagtc cttatcttat
     1021 atctatagaa tataccccaa aaagtggaag aaataaaggt gttgtatacg agcaatttta
     1081 taatggagaa aaattaaatt tattcgcatg gctaaaagat gttgtagaaa ttaaagataa
     1141 gcaaattttt aaaaaagaat tagctggaac tttatgggat tttgctttcg caatgacaaa
     1201 tttaacaaaa gaaggggata ctcaatttag caatgcaaaa aaacccgaag ctttacttca
     1261 aagaattata gaaatttcta caaatgaaaa cgacatagta atggattttt ttgcgggaag
     1321 tggcactact ctagccgttg ctcataaaat gaaacgcaaa tggataggca tagaacaaat
     1381 ggattatata gaaactatca caaaagaaag actcaaaaaa gtcatagaag gtgagcaagg
     1441 tggtatcagc aaagcaataa attggcaagg tggtggaaat tttgtttatg ctgagcttat
     1501 gccacttaat gcaatttata aagaaaaaat acaaaattta aatgatgaaa aagaactaga
     1561 taatatttat caagagttaa aaaccaaagc ttttttagat tatagagtag atataaatga
     1621 aattttaaaa gataaagaat ttgaaaattt agacttagaa agcaaaaaag aaattttaaa
     1681 acttgtttta gactctaata tggattatct tttatatggt gatataaaag atgaagatta
     1741 tgccttgtct aaagaaataa taaaacttaa taaaatattt tatggtgatg aaaatgttta
     1801 ataaaaaact acacgagctt ttacaagaag aatttggaaa aagaggtata gagcaaatag
     1861 aaattccttt ttacgtaaaa gagaatttat caaaagaatt aagaatttat caagaaaaag
     1921 ctctaaagta ttattatgca aattctgata gcataaaaca aagacattta atgtttaata
     1981 tggcaacagg aagtggaaaa actcttataa tggctgcatt aatactagat tgttataaca
     2041 aaggatatag aaattttata ttttttgtaa attctacttc gattttagaa aaaactaaag
     2101 caaattttgc aaataaatat
//
LOCUS       DAPIYB010000123         2048 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.124, whole genome shotgun sequence.
ACCESSION   DAPIYB010000123 DAPIYB010000000
VERSION     DAPIYB010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2048
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.124"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..517
                     /locus_tag="RJ318_001644"
     CDS             <1..517
                     /locus_tag="RJ318_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431477.1"
                     /translation="NYIDLNEEYIFTQEVDEDNKKSRITTSFLKFSRYSDFGKNLIQE
                     AEKIINKRKKISWGVIGPWFLADHVKKCGLENFVWDYKRTCQIPWCNVKIFLDNTSID
                     ISQPFLHLFSEMWRLNNMEKNTFHQMGVYGQLLKKHEIEKLYNQINTCLKTSMLDNIA
                     SFLTKFFIKKL"
     gene            complement(512..1174)
                     /locus_tag="RJ318_001645"
     CDS             complement(512..1174)
                     /locus_tag="RJ318_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002937317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase family
                     protein"
                     /protein_id="HDV7431478.1"
                     /translation="MTLAIIPARAGSKGIKNKNLALLHDRPLLYYTINAAKNSKYVDK
                     IVLSSDGDDILEYGQTQGVDVLKRPKELALDDTTSDKVVLHTLSFYKDYENIVLLQPT
                     SPLRTNVHIDEAFLKFKNENSNALISVVECDNKILKAFIDDNGNLKGICDNKYPFMPR
                     QKLPKTYMSNGAIYIVKSNLFLNNPTFLQEKTSCYIMDEKASLDIDTTEDLKRVNNIS
                     FL"
     gene            complement(1205..2048)
                     /locus_tag="RJ318_001646"
                     /pseudo
     CDS             complement(1205..2048)
                     /locus_tag="RJ318_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002852888.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1,4-N-acetylgalactosaminyltransferase"
BASE COUNT          710 a          290 c          244 g          804 t
ORIGIN      
        1 aaattatatt gatttaaatg aagaatatat ctttacacaa gaagtggatg aagataataa
       61 aaaatcaaga atcacaacat cctttttaaa attttctcga tattcagatt ttggaaaaaa
      121 tcttatacaa gaagcagaaa aaatcattaa taaaagaaaa aaaatctcgt ggggtgttat
      181 aggaccttgg tttttagctg atcatgtaaa aaaatgtggt ttagaaaatt ttgtttggga
      241 ttataaaaga acttgtcaga ttccatggtg taatgtaaaa atttttttag ataatacttc
      301 aatagatatc agtcaacctt tcttacattt attttcagaa atgtggagat taaataatat
      361 ggagaaaaat acttttcatc aaatgggagt ttatggacaa cttttaaaaa aacatgagat
      421 agaaaaatta tataatcaga taaatacttg tttaaaaaca tcaatgctag ataatatagc
      481 atccttttta accaagtttt ttataaaaaa attataagaa gcttatatta ttaactcttt
      541 ttaaatcctc tgttgtatct atatccaaac tagctttttc gtccattata tagcaacttg
      601 ttttttcttg tagaaaagtt gggttattta aaaataaatt tgactttact atataaattg
      661 caccattact catataagtt tttggtaatt tttgtctagg cataaatgga tatttgttat
      721 cacaaattcc ttttaagtta ccattatcat ctataaaagc ttttaaaatt ttattatcac
      781 attctacaac acttattaat gcatttgagt tttcattttt aaattttaaa aaagcttcat
      841 ctatatgtac atttgtcctt aaaggagaag tgggttgtaa taaaacaata ttttcataat
      901 ctttataaaa actcaaggta tgcaatacaa ccttatcact agttgtatca tctagcgcta
      961 attctttagg tctttttaac acatctacac cttgagtttg tccatattct aatatatcat
     1021 cgccatcact acttaaaaca attttatcta catactttga attttttgct gcattgatag
     1081 tataatacaa caaaggccta tcatgcaaaa gagctaaatt tttatttttt ataccttttg
     1141 aaccagctcg agcaggtatt atagctaaag tcattttttt accactcaat ttaaatttat
     1201 ctaatatttc acgaattact ttttcatcaa gcattgtata atttattttc tttatttttc
     1261 tatgtctata atggattttt ttaaaatctt ctaaagttaa agcatccaaa tgtttttgat
     1321 aatcatttct atgatatttt aaagcaggaa aatgccattg aagtaattct gcttgtaaga
     1381 tttttatatg tttgggtata atttgctgtt cagaatacaa ttctttcaca gttttttcag
     1441 gatcaatcca ctgactttgc tttgaaacca ttctttctat aaatacacta ttgcactttt
     1501 gaattaacaa ttgatcccct ccatcgataa aaccacattc tcctatattt tgaattacaa
     1561 ttttatctag tattaaaaaa ttaattcttg gaaatctaac agcagtattt tttgatgcca
     1621 tataaaaact cttatataat ttttttgcat catagtaatg atccacatct atttttataa
     1681 gccactcatc ttgcggtata aaactagcta catagttata ataactatga agtttatttt
     1741 cttcgctttg cggattttca atttgcacct catggggata ttttactggt ataaacgaag
     1801 ggtattgttt gcaaaattcc aaaataattt cttcacttcc atcagtacaa tcattatatc
     1861 ctataacacc tctttgtatg gcaggtaaca tactttcaag tgatactctt aaagtagtgg
     1921 cttcattttt tactcttata aaagcccatg gatttaaagg agattttgta tcttttgagt
     1981 ttggatcaaa atcaaaaaaa cctttatgct tttcattgta gattttttta tttaagttta
     2041 aaaaatat
//
LOCUS       DAPIYB010000124         2006 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.125, whole genome shotgun sequence.
ACCESSION   DAPIYB010000124 DAPIYB010000000
VERSION     DAPIYB010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.125"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            72..1931
                     /locus_tag="RJ318_001647"
     CDS             72..1931
                     /locus_tag="RJ318_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7431479.1"
                     /translation="MREELFLKNTQALFEVDEFLACTLRSLKYLTFALIQDENGINFK
                     KDDIFLYENPNKELLENLTLFKTEYNKYPVLFFYGFGNGMFYKTLCKNKQHKHIIIFE
                     DNLEILTLAFHLFDFSEELKKEQLILFYTPNINTAQLTTLFTYEIIQKSVKIFNLFIH
                     NDFYQQFYSTQIQNINTQLIEMIRFIVLNKGNDPHDSLVGIKHTLDNLPKMLNHGIFQ
                     EFLKERRAKVENAIIVSTGPSLIKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV
                     CMLERDDIVSKCFDNDFGDFNKGILFILASVVHKEVLDFLEKDQRAYMLVHRPLNFAA
                     SLKLDEYGYLGVGHSVSNMIYELAGALRFENIIFIGQDLAYGEDGSSHPKEHIHGSQG
                     EEIRGEKYTLAYGGKGKVRTQLTWNLFRQAFEKDIFWAKEKLNITTYNCTEGGARIEG
                     TIEKPFLWACENLLDKDLNKPFDFPKFLDKKLAKEKLEKTKKYLQKSILESKEFIKKT
                     QTQLQKLRYTLEKNDKNFQTLEKIKNDLLNLFKEFKKLKLFNELCQAIYFHNECEILK
                     FEVLNTNKQKENLIDFLKIQHNWFIQGLGYLDTQNKTIEKSLENWNFDDIIKK"
BASE COUNT          804 a          270 c          283 g          649 t
ORIGIN      
        1 aaaaatatac ttcctttaga agaaaaactt aaagaaagaa aattagataa atggatggaa
       61 agggtgagaa ggtgagagaa gagctttttt taaaaaatac tcaagctttg tttgaggtcg
      121 atgagttttt agcttgtaca ctgagatcac ttaaatactt aacttttgca cttatccaag
      181 atgaaaatgg aataaatttt aaaaaagatg atatttttct ttatgaaaat cccaataaag
      241 agcttttaga aaaccttact ctgtttaaaa ccgaatataa caaatatcct gttttgtttt
      301 tttatggctt tggaaatgga atgttttata aaactttatg taaaaacaaa caacataaac
      361 acattatcat ttttgaagac aatcttgaaa ttttaacttt agcttttcat ttatttgatt
      421 ttagcgaaga attaaaaaaa gaacaactaa tactttttta tactccaaat attaatacag
      481 cacaactcac cacacttttt acttatgaaa tcattcaaaa aagtgtaaaa atttttaatc
      541 tttttatcca taatgatttt tatcaacaat tttatagcac tcaaatacaa aatataaata
      601 ctcaactgat agaaatgata cgatttatcg ttttaaacaa aggtaatgat ccacatgatt
      661 ctttagttgg aatcaaacat accctagata atctccctaa aatgttaaat catggaattt
      721 ttcaagaatt tctcaaagaa agaagagcta aggttgaaaa tgctatcatt gtttctacag
      781 gaccaagtct tataaaacaa cttcctttgt taaaaaaata tgctaataaa gctacaattt
      841 tttgtgcgga ttcttcttat cctattttag ctaaacatgg tataaagcct gattatgttt
      901 gtatgttgga acgtgatgat atagtttcta aatgttttga taatgatttt ggcgatttta
      961 acaaaggcat acttttcata cttgcttctg tggttcacaa agaagtatta gattttttag
     1021 aaaaagatca aagagcttat atgcttgtac atcgcccttt aaattttgca gctagtttaa
     1081 aacttgatga atatggatat cttggagtag gacacagtgt ttccaatatg atctatgaac
     1141 tagcaggagc tttaagattt gaaaatatca tttttatagg acaggattta gcttatggcg
     1201 aggatggaag ttcacatcct aaagagcata tacatggaag tcaaggtgaa gaaatcagag
     1261 gagaaaaata tacactagct tatgggggaa aaggcaaagt aagaactcaa cttacttgga
     1321 atttatttcg tcaagctttt gaaaaagata tattttgggc aaaagaaaaa ctcaatatca
     1381 ccacctacaa ctgcaccgaa ggtggagcaa gaatagaagg aactatagaa aaaccttttt
     1441 tatgggcttg tgagaattta cttgataaag atttaaataa accttttgat tttccaaaat
     1501 ttctagataa aaaactagcc aaagaaaaat tagaaaaaac aaaaaaatat ctccaaaaaa
     1561 gcattttaga atccaaagaa tttataaaaa aaactcaaac tcagcttcaa aagcttagat
     1621 acactttaga aaaaaatgac aagaattttc aaactcttga aaaaatcaaa aatgatcttt
     1681 taaatctttt taaagaattt aaaaaactca agctttttaa tgaactttgt caagctattt
     1741 attttcataa cgaatgcgaa attttaaaat ttgaagtttt aaacacaaat aagcaaaaag
     1801 aaaatttaat agactttttg aaaatacaac acaattggtt tatccaaggt ttaggatatc
     1861 ttgatactca aaacaaaacc atagaaaaaa gtttagaaaa ttggaatttt gacgatataa
     1921 tcaaaaaata attaggattt ccaatgacct tcacccctac ccaaaaagaa ctctttaaca
     1981 aaaacattga ggctttaagt aatatt
//
LOCUS       DAPIYB010000125         1847 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.126, whole genome shotgun sequence.
ACCESSION   DAPIYB010000125 DAPIYB010000000
VERSION     DAPIYB010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1847)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1847)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.126"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            19..591
                     /locus_tag="RJ318_001648"
     CDS             19..591
                     /locus_tag="RJ318_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HDV7431480.1"
                     /translation="MKKVLLSSLVAVSLLSTGLFAKEYTLDKAHTDVGFKIKHLQISN
                     VKGNFKDYSAVIDFDPASAEFKKLDVTIKIASVNTENQTRDNHLQQDDFFKAKKYPDM
                     TFTMKKYEKIDNEKGKMTGTLTIAGVSKDIVLDAEIGGVAKGKDGKEKIGFSLNGKIK
                     RSDFKFATSTSTITLSDDINLNIEVEANEK"
     gene            complement(596..1552)
                     /locus_tag="RJ318_001649"
     CDS             complement(596..1552)
                     /locus_tag="RJ318_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431481.1"
                     /translation="MFLLDFLISLSFIFEISALVLSFYFKNSKIFFLTLVLLGAKLPY
                     FYTSFFQANLFVALFLPMIFTLFCVGKHHVLILNKKNIASITTLIFIGILSIILPRNT
                     TFNSAGLEFHFIALDFFKPVSELGFLFFLVGLILIFIKTFKTKEYYLLIAFFTAYFQF
                     LFQEGAGIRYFEFASLVFCFYLLNHAYRLAFFDTLTKLPNEKSLTRFTKGKNNYIIAL
                     LHFNELKDTKESYTKLILKQIAKILKRFRAKIFIVENDFILIFNDKNQALNHLAFLES
                     TLKNTEFNLENENFKPDFKLIWQESEENLDKNLQSLRARLLD"
     gene            complement(1614..1823)
                     /locus_tag="RJ318_001650"
     CDS             complement(1614..1823)
                     /locus_tag="RJ318_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDV7431482.1"
                     /translation="MTKKSKRDMAYELDIDVSTLYNWRKYKPNLYRIVMLGFKFDELL
                     DNSKKTHEELLHIEQTIQDEIAKFK"
BASE COUNT          737 a          218 c          260 g          632 t
ORIGIN      
        1 ctataaaaaa ggaaaaaaat gaaaaaagtt ttattgagtt cattggttgc ggtgtctttg
       61 ttaagcacag gtttgtttgc taaagaatat actttagata aagcacatac agatgtaggt
      121 tttaaaatca aacatttaca aattagcaat gtaaaaggaa atttcaaaga ttattctgcg
      181 gtgattgatt ttgatcctgc gagtgctgaa tttaaaaagc ttgatgtaac tataaaaatc
      241 gcatctgtaa atacagaaaa tcaaacaaga gataatcact tacaacaaga tgattttttc
      301 aaagcaaaaa aatatcctga tatgactttt acaatgaaaa aatatgaaaa aatcgataat
      361 gaaaaaggca aaatgacagg aactttaact atagctggag tttctaaaga tatcgtttta
      421 gatgctgaaa tcggcggtgt agctaaaggc aaagatggaa aagaaaaaat aggattttct
      481 ttaaatggaa aaatcaaacg ctctgatttt aaatttgcaa caagtacttc aactattact
      541 ttaagtgatg atattaattt aaatatcgaa gttgaagcga acgaaaaata attttttagt
      601 ctaagagtct tgctcttaga ctttgtaaat ttttatccaa attttcttca ctttcttgcc
      661 aaatcaattt aaaatccggt ttaaaatttt cattttctaa attaaattcc gtgtttttca
      721 aggtggattc taaaaaagca agatgattta aagcttgatt tttatcatta aaaattaaaa
      781 taaaatcatt ttctacgata aaaatttttg ctctaaagcg ttttaaaatt tttgcaattt
      841 gttttaaaat gagtttggta tagctttctt tggtatcttt tagttcatta aaatgaagca
      901 aggcaatgat atagttgttt tttccttttg taaagcgtgt aaggcttttt tcattgggta
      961 gctttgttaa ggtgtcaaaa aaagctaacc tataagcgtg atttaaaaga taaaaacaaa
     1021 aaaccaaact tgcaaattca aaatatctta ttcctgctcc ttcttggaat aaaaattgaa
     1081 aatacgcagt aaaaaatgcg ataagaagat aatattcttt agttttaaag gttttgataa
     1141 aaatgagtat taagccgact aaaaaaaata aaaatcctaa ttcactcaca ggtttaaaaa
     1201 aatctaatgc aataaaatga aattctaaac cagcactatt aaaagtagta tttctaggta
     1261 aaatgatact taaaatgcct ataaaaataa gggttgtaat tgaagcgata ttttttttat
     1321 ttaaaattaa aacatgatgt tttccaacgc aaaatagagt aaaaatcata ggtaaaaata
     1381 aagctacaaa taaattagct tgaaaaaaac ttgtataaaa ataaggcaac ttggctccta
     1441 atagcactaa agttaaaaag aaaatttttg aatttttaaa gtaaaaggat aatacaagtg
     1501 ctgaaatttc aaaaataaaa ctcaatgata ttaaaaaatc taataaaaac attatcaaat
     1561 ccttgatttt aataaaagtg ataattgtat agaaaaaagc ttaaaagcgg attttattta
     1621 aatttagcaa tttcatcttg tatggtttgt tctatatgga gtaattcttc atgagttttt
     1681 ttgctattat ctaaaagttc atcaaattta aagccaagca taacaatacg atataaattg
     1741 ggtttatatt ttctccaatt atataaagtg ctaacatcaa tgtctagttc atatgccata
     1801 tcacgcttgc tcttttttgt cattttttac cttaaaaatt tagcctt
//
LOCUS       DAPIYB010000126         1778 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.127, whole genome shotgun sequence.
ACCESSION   DAPIYB010000126 DAPIYB010000000
VERSION     DAPIYB010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.127"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..851)
                     /locus_tag="RJ318_001651"
     CDS             complement(<1..851)
                     /locus_tag="RJ318_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344727.1"
                     /note="FlaA; structural flagella protein; in Helicobacter
                     the flagella are composed of flagellin A and flagellin B;
                     the amounts of each seem to be controlled by environmental
                     conditions; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDV7431483.1"
                     /translation="MGFRINTNVAALNAKANADLNSKSLDASLSRLSSGLRINSAADD
                     ASGMAIADSLRSQANTLGQAISNGNDALGILQTADKAMDEQLKILDTIKTKATQAAQD
                     GQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNFINQEFQIGASSNQTVKAT
                     IGATQSSKIGLTRFETGGRISSSGEVQFTLKNYNGIDDFQFQKVVISTSVGTGLGALA
                     DEINKNADKTGVRATFTVETRGIAAVRAGATSDTFAINGVKIGKVDYKDGDANGALVA
                     AINSVKDT"
     gene            complement(948..>1778)
                     /locus_tag="RJ318_001652"
     CDS             complement(948..>1778)
                     /locus_tag="RJ318_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7431484.1"
                     /translation="YQRFNLNDFGYIDTGTHVSHFSYTLALALGFKNIIMIGQDLAFD
                     EEGNSHSKGFDFGEKFSGEENIDKLKVPAYAGKGEVLTHITWNDYRIKLEYLFACNEQ
                     KAKFYNATEGGARINFTEELSFKECCEKLLTKEKPKFELPKSLTKNRSDKLLAKFKEK
                     IQKDQENAKRFLDDALALKQILENILSKDFILPLEFLEKVYQNIENFNHSLDEDEFIQ
                     DEVLRGAFAYRGKFIADVLKLHIQDKTHFITAYIKAYHEWLLYFMEKLEQKYKSLSKV
                     "
BASE COUNT          553 a          314 c          245 g          666 t
ORIGIN      
        1 gtatctttaa ccgaattgat tgcagcaact aaggctccat tagcatcacc atctttgtaa
       61 tctactttac cgatttttac cccattgata gcaaaagtat ctgaagtagc tcctgctcta
      121 actgcagcta tacctctagt ttctactgta aaagtagctc taacacctgt tttatcagca
      181 tttttattga tctcatctgc taaagctcca agtcctgttc caactgaagt tgaaatcaca
      241 actttttgaa actgaaaatc atctatacca ttgtaatttt taagagtaaa ttgcacttca
      301 ccactagatg aaattcttcc tcctgtttca aagcgtgtta aacctatctt agaagattga
      361 gttgctccta tggtagcttt tacagtttga tttgaacttg cgccgatttg aaattcttga
      421 ttgataaaat ttccacttaa aagttgttta ccgttaaatg aagtagtatt tgcgatattg
      481 tcaagttctt ccattaaacg gttgatatct gcttgaagca tagttcttgt ttttaaactt
      541 tgtccatctt gagccgcttg agttgcctta gttttaatag tatctaagat tttaagttgc
      601 tcatccatag ccttatcagc agtttgtaaa atacctaaag catcgttacc attagatata
      661 gcttgaccta aagtattagc ttgagatctt aaactatctg ctatcgccat ccctgaagca
      721 tcatctgctg cggagttaat tctaagacct gaactaagtc tgcttaaaga agcatccaaa
      781 cttttactat ttaaatcagc gtttgcttta gcatttaaag ctgcaacatt ggtgttaata
      841 cgaaatccca ttttaaatcc ttttaaaaaa attcaagctc atccatgaac ttgttaaatg
      901 ctatatcgtg caatcaaaaa aatattttat actttggtaa taaaatttca tacttttgac
      961 aaagacttgt atttttgctc taatttttcc ataaaataaa gcaaccattc atggtaagct
     1021 ttaatataag ctgtgatgaa atgcgtttta tcttgtatat gaagtttcaa tacatcagcg
     1081 ataaattttc cacgataagc aaaagctcct cttaaaactt catcctgtat aaactcatct
     1141 tcatctaaag agtgattgaa attttctatg ttttgataga ctttttctaa aaattccaaa
     1201 ggtaaaataa aatctttact gagtatattt tctaaaattt gttttaaagc taaagcatcg
     1261 tctaaaaatc ttttagcatt ttcttgatct ttttgtattt tttctttgaa tttagctagt
     1321 agtttatcac ttctattttt agttaaactt tttggaagtt caaatttagg tttttctttt
     1381 gtaaggagtt tttcacaaca ttctttaaaa gaaagttctt cagtgaaatt aatccttgct
     1441 ccaccttcag tagcattgta aaactttgct ttttgttcgt tgcaagcaaa aaggtattct
     1501 aattttatac gataatcatt ccaagttata tgagttaaaa cttcaccttt acctgcatag
     1561 gcagggactt taagtttatc tatattttct tcaccactaa atttctctcc aaaatcaaaa
     1621 ccttttgagt gtgaatttcc ttcttcatca aaggctaaat cttgtcctat catgatgata
     1681 tttttaaatc ctaaagctaa agctaaggta taagaaaaat gacttacatg agtacctgta
     1741 tcgatatagc caaagtcatt aagattgaag cgttgata
//
LOCUS       DAPIYB010000127         1639 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.128, whole genome shotgun sequence.
ACCESSION   DAPIYB010000127 DAPIYB010000000
VERSION     DAPIYB010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.128"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            44..1150
                     /gene="glf"
                     /locus_tag="RJ318_001653"
     CDS             44..1150
                     /gene="glf"
                     /locus_tag="RJ318_001653"
                     /EC_number="5.4.99.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HDV7431485.1"
                     /translation="MYDYLIVGSGLFGSIFAYEATEKGYTCLVVEQREHIGGNCYTEN
                     IKNINVHKYGAHIFRTSDQNIWDYMNQFCEFNHFINSPIAIYKDEIYNLPFNMNTFSK
                     LWGIKTPNEARKIIEMQKQIIQHPPKNLEEQAISLVGTDVYEKLIKGYTEKQWGRSCK
                     DLPASIIRRLPVRYIYDNNYFNDPYQGIPKGGYTAIFDKMLKKSKVILNTDFLKYKDK
                     FKNKAKKIVFTGCIDAYYDYRYGALEYRSLKFEHKILNLDNFQGVAVVNYTDKEIPYT
                     RIIEHKHFEFGNTDTTVISEEYPLEWIKGIEPYYPINDEKNQALYEKYKQLAKHESNV
                     YFGGRLGEYRYYDMQDVVRSALLFCKNELKNKQG"
     gene            1152..>1639
                     /locus_tag="RJ318_001654"
     CDS             1152..>1639
                     /locus_tag="RJ318_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7431486.1"
                     /translation="MMNYNTPKVSIVVPSLNSISYIRECIDSILNQTLKDIEILCIDA
                     NSTDGTLEVLKNYEKKDKRLRVIISDKKSYGYQMNLGIKEAKGEYLGIVESDDYIKTN
                     MYERLYEIAKKNDCEVVKGDFYIFAYGKTEYVNVLRNSCEDIYNYKVNWNKDIRIFLG
                     SDG"
BASE COUNT          643 a          137 c          292 g          567 t
ORIGIN      
        1 aggtaatttt ttttataatt aggttttgtg aggaatgtga ttcatgtatg attatttaat
       61 tgttggttct ggattgtttg gtagtatttt tgcttacgaa gcaactgaaa aaggttatac
      121 ttgtttagtt gtggagcaaa gggaacatat tggaggtaat tgttataccg aaaatattaa
      181 aaatatcaat gtgcataaat atggtgctca tatttttaga acttcagatc agaatatatg
      241 ggattatatg aatcaatttt gtgaatttaa tcattttatc aattctccta ttgcaatcta
      301 taaagatgaa atttataatt tgccttttaa tatgaatact tttagtaaat tatggggaat
      361 taaaactcca aatgaagcta gaaaaataat tgaaatgcaa aaacaaataa ttcaacatcc
      421 tccaaaaaat ttggaagaac aagctatatc tttagttggt acagatgtat atgaaaaact
      481 tattaagggt tatacagaaa aacagtgggg tagatcttgt aaggatttgc ctgcttctat
      541 tataagaaga ttgcctgttc gatatattta tgacaataat tattttaatg atccctatca
      601 aggtatccct aaaggcggct atacggcaat ttttgataaa atgctaaaaa aaagtaaagt
      661 tattttaaat actgattttt taaaatataa agataaattt aaaaataaag ctaaaaaaat
      721 agtttttact ggttgtattg atgcttatta tgattatcga tatggagctt tggaatatag
      781 aagtttaaaa tttgagcata aaatattaaa tttagacaat tttcaaggag tggcagttgt
      841 caattatact gacaaggaaa taccttatac tagaattata gagcataagc attttgaatt
      901 tggaaataca gatacaacag ttataagcga agaatatcct ttagaatgga ttaagggtat
      961 tgagccttat tatccaataa atgatgaaaa aaatcaagct ttgtatgaaa agtataagca
     1021 attagcaaaa cacgagagta atgtatattt tgggggaaga ttgggagaat atagatatta
     1081 tgatatgcaa gatgttgtaa gatcggcatt attattttgt aaaaatgagt taaaaaataa
     1141 gcaaggatga aatgatgaat tataatactc caaaagtttc tattgttgta ccttcattaa
     1201 attctatatc atatataaga gaatgtattg atagtatatt aaatcaaact ttaaaagata
     1261 ttgagatact ttgtattgat gcaaattcaa ctgatggaac tttagaagtt ttaaaaaact
     1321 atgaaaaaaa agataagagg cttagggtaa taatatcaga taagaaaagt tatggttatc
     1381 aaatgaatct tggtataaaa gaggcaaagg gagaatatct tggtatagtt gaaagtgatg
     1441 attatattaa aacaaatatg tatgaaagac tttatgaaat tgctaaaaag aatgattgtg
     1501 aagttgttaa aggggatttt tatatatttg catatggtaa aactgaatat gttaatgttt
     1561 tgagaaattc ttgtgaagat atttataatt ataaagtaaa ttggaataaa gatataagaa
     1621 tatttttagg ttcggatgg
//
LOCUS       DAPIYB010000128         1521 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.129, whole genome shotgun sequence.
ACCESSION   DAPIYB010000128 DAPIYB010000000
VERSION     DAPIYB010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.129"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            60..1484
                     /locus_tag="RJ318_001655"
                     /pseudo
     CDS             60..1484
                     /locus_tag="RJ318_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344094.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
BASE COUNT          427 a          216 c          303 g          575 t
ORIGIN      
        1 atttaaaaat gtgatacaat aataactgtt tttaaatatt aattttcaaa ggagttaaaa
       61 tggacttttt aacaagcctt agtgaggcag ggcaatttgc aatccaaatc attatcgttt
      121 taatttgtct tttttacggt gcaaaaaaag gcggcatagc gcttggttta cttggtggta
      181 taggtatttt aatgcttgta tttgcttttc atataaagcc tggaaaacca gccatagatg
      241 ttatgcttac gattttagcg gtagtggttg cgagtgcaac tttgcaagca agtggtggtt
      301 tggatgttat gcttcaaata gcagaaagaa ttttaagacg caatcctaag tttttgacaa
      361 tattagcacc ttttgtaacc tgctttttga ctatactttg tggaacagga catgtggttt
      421 atactattat gcctattatt tatgatatag cgattaaaaa cggtattcgt cctgagcgtc
      481 caatggcggc agcttctata tcatcacaaa tgggtattat tgcatctcct gtatctgtgg
      541 ctgttgtgag tttgactgct ttgcttttaa atgctaatca taaattagca ggttttgatg
      601 gttatattaa tcttcttcaa attactatac ctagtacatt atttggtgta ttgtgtatag
      661 gaattttttc ttggtttaga ggaaaagatt tggataaaga tgaagtattt caagaaaaac
      721 ttaaagatcc tgaatttaaa aaatatgttt atggggattc taaaacactt ttaggtgtta
      781 aacttccaaa aagcaattgg gttgcaatgt ggattttctt aggagctatt gctttagtgg
      841 ctttattagg tgtatttgat ttcttgcgtc caaactgggg ataagttgta aaaaatggca
      901 ttcctcaagt agatgcttta ggcaatccta aaatggatgt tttatccatg gtttcagtta
      961 ttcagatgtt tatgctttta gcaggttctt tgattatcat ctttactaaa acagatgcaa
     1021 agaaaatcgg ctctaatgaa atttttaaat caggtatgat agcacttgtt gcggtttttg
     1081 gaatttcttg gatggctgat actatgtttg cggttcacac tcctatgatg aaagcagcgc
     1141 ttggagatat agtaaaagag catccttgga cttatgctgt aatgcttctt ttaatttcaa
     1201 aatttgtaaa ctctcaagca gcggctattt cggcttttgt gcctttggct ttaggaattg
     1261 gtgttgaacc tggtgtaatt gttgcctttg cggctgcttg ttatggatat tatattttac
     1321 caacctatcc aagcgatttg gctactatac aatttgacag atcaggtact actcacattg
     1381 gtaaatttgt tatcaatcat agttttattt taccaggtct tataggtgta atcacttctt
     1441 gtatagcagg atattttatc gctatggcag cgggttatct ttaaaaattt ttagtaggat
     1501 ttttcctgct aaattcttca t
//
LOCUS       DAPIYB010000129         1398 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.130, whole genome shotgun sequence.
ACCESSION   DAPIYB010000129 DAPIYB010000000
VERSION     DAPIYB010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.130"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            107..1171
                     /locus_tag="RJ318_001656"
     CDS             107..1171
                     /locus_tag="RJ318_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDV7431487.1"
                     /translation="MKYPLDCEENFEKSFLFWLAKYVKFKLNSLSNKELKNPQALAEV
                     NFALTKGVKNIEELDALAKKARNAGLSGVNTYFNPLKKVFEYLNFYKLYSLKQIDEEL
                     IVEVLASVTGALSDASKKNYRIAVINFFDFLDKQNEEDEKAHIFDINLKNWAGIAGSK
                     GVKLPEFMSEEELKKFLDAIENADFKNNTIRNKLILKIIIFTGIRVSEAINIKMGDIS
                     EENDLYIIRIRAKGNKYRVVMIKKELIYDLLKNVSINYMSKDTLIFVNKKGTPLTQSY
                     VSRIVEQLLFRAGIRKQKNGAHMLRHTFATLLYKKQKDLVLVQEALGHASLNTSRIYT
                     HFDNDKLKLAAQVAKELSDS"
     gene            1161..>1398
                     /locus_tag="RJ318_001657"
     CDS             1161..>1398
                     /locus_tag="RJ318_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aminodeoxychorismate synthase
                     component I/aminotransferase"
                     /protein_id="HDV7431488.1"
                     /translation="MILENYAVFGKYFYHDLKHALKAFNHKESKKCFKFIEKYKNDFY
                     VLILADYELYRYFQDKNFTSKKAYLSVFAFKKRKK"
BASE COUNT          553 a          181 c          209 g          455 t
ORIGIN      
        1 atataaaaac aaactttttc ctaaaaaagc ttttttttac taagttaata ctaaaatacc
       61 ttttctaatt aaaaagctaa aaatttatat tttaggaaaa gtttttatga aatacccttt
      121 agattgtgaa gaaaattttg aaaaatcatt tttattttgg ctggcaaaat atgtaaaatt
      181 taaactcaat tcgctatcta acaaagagtt aaaaaatcca caagctttag cagaagttaa
      241 ttttgccctt acaaaaggtg taaaaaacat tgaagaactt gacgctctag caaaaaaagc
      301 aagaaatgct ggtttaagtg gagttaatac ttattttaac cccttaaaaa aagtgtttga
      361 atatttaaat ttttacaagc tttactcttt aaaacagatt gatgaggaac tcattgtaga
      421 agttttagca agtgtaacag gtgctttatc agatgcaagt aaaaaaaatt accgtattgc
      481 tgtgattaat ttttttgatt ttttagacaa gcaaaacgaa gaagatgaaa aagcacatat
      541 ttttgatatc aatcttaaaa actgggcagg tatagcaggt tctaaagggg tgaaattacc
      601 cgaatttatg agtgaagaag agcttaaaaa atttcttgat gctattgaaa atgcagattt
      661 taaaaacaat accatacgca ataaacttat tcttaaaatc atcattttta caggcatacg
      721 ggtaagcgaa gctatcaata tcaaaatggg tgatattagc gaagaaaacg atctttatat
      781 cataagaata agagctaaag gcaataaata tcgtgttgta atgataaaaa aagaacttat
      841 ttatgatttg cttaaaaatg taagtattaa ttatatgagc aaagacaccc taatttttgt
      901 caataaaaaa ggcactccac tgactcaatc ttatgtcagt cgcatagtag aacagctttt
      961 atttcgtgca gggattcgca agcaaaaaaa tggtgctcac atgttgcgtc atacttttgc
     1021 caccctgctt tataaaaagc aaaaagactt agttttagtt caagaagctt tagggcatgc
     1081 aagtttaaat acttcaagaa tttacactca ttttgataat gataaattaa aacttgccgc
     1141 acaggttgca aaggaattaa gtgattcttg aaaactatgc tgtttttggt aaatattttt
     1201 accatgattt aaaacacgct ttaaaagcct ttaaccacaa agaaagtaaa aaatgcttta
     1261 aatttataga aaaatataaa aatgattttt atgttttaat acttgctgat tatgagctat
     1321 atagatattt tcaagataaa aatttcacaa gcaaaaaagc ttatttgtcc gtatttgctt
     1381 ttaaaaaaag aaaaaaat
//
LOCUS       DAPIYB010000130         1368 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.131, whole genome shotgun sequence.
ACCESSION   DAPIYB010000130 DAPIYB010000000
VERSION     DAPIYB010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1368)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.131"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(148..564)
                     /locus_tag="RJ318_001658"
     CDS             complement(148..564)
                     /locus_tag="RJ318_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-like domain-containing protein"
                     /protein_id="HDV7431489.1"
                     /translation="MKAKLTLLALLGTTVLLAKDMVVPASELPNNAKEFISKNFKTAQ
                     IGLVKKDIDSYDVILNDGTEIDFMINGEWKEVDGKYKALPHTILPNVMKKVSATQPNA
                     QILEVDKEINGYKFKFNNNMEVYTDMQGNILGQKLD"
     gene            complement(628..1365)
                     /locus_tag="RJ318_001659"
     CDS             complement(628..1365)
                     /locus_tag="RJ318_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002826420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4261 domain-containing protein"
                     /protein_id="HDV7431490.1"
                     /translation="MDLNHNFTSFVLLDEVDFNFSELKSILEDKFNIKIADENFTKEG
                     VIFSYENMLVTLNLINNPIPNHEVEYYANFNFMWKDALEQTKKHKAHLLIAVLSQDQS
                     KLEQAKMFTKIAALCLDNKHALGFYTGAVVLEPSFYIENAKMLDDNRLPVYNWIYVSV
                     YPSENGVNAYTYGLRNFDKLELEVCDLNIEEKELFFCIYDIVLHILTYDINLKDKDIL
                     KFEDGKEIKFIKSQGISVENESLKIIF"
BASE COUNT          485 a          219 c          146 g          518 t
ORIGIN      
        1 tttataaaaa aacaatcact tgtatcaata cagtattatt ttaaaactaa atatattttg
       61 agttttgcaa tcaaaaaata aaaatttgga agactatgct tccaaatttt tgcatcaaat
      121 tttctaaggg agttaaattt tcaaaaatta atctaatttt tgacctagga tatttccttg
      181 catatctgta taaacttcca tattgttatt aaacttaaat ttataaccat taatttcttt
      241 gtctacttca agaatttgag catttggttg agttgcactc acttttttca taacattagg
      301 taagatagta tgtggcaaag ccttatattt tccatcaact tctttccact ctccattgat
      361 cataaaatca atttcagttc catcatttaa aatcacatca taagaatcta tatctttttt
      421 caccaaacca atttgagcgg ttttaaaatt tttagaaata aattctttgg cattatttgg
      481 aagttcgcta gcaggaacaa ccatatcttt agctaaaagc accgtagtac ccaacaaagc
      541 aagtaaagtt agttttgctt tcataatttc tccttttttt cttggttggc gaaagtttaa
      601 ctcaaaactg tgaagtgaat gtgaaactta aaaaataatt ttcaagcttt cattctcaac
      661 acttatacct tgacttttta taaattttat ttcttttcca tcttcaaatt ttaaaatatc
      721 tttatctttt agattaatat cataagttaa aatatgcaaa acaatatcat aaatacaaaa
      781 gaaaagttct ttttcttcta tgtttaaatc acaaacttca agttctaatt tatcaaaatt
      841 tctaagccca taagtataag cattaactcc attttcacta ggataaacac taacatatat
      901 ccaattatat accggcaagc gattatcatc taacattttt gcattttcta tataaaaact
      961 gggctctaaa acaactgcac ctgtataaaa acctaaagca tgtttattat ccaaacataa
     1021 agctgcaatt ttcgtaaaca ttttagcttg ttctaatttg ctttgatctt gacttagcac
     1081 cgctataaga agatgagctt tatgtttttt agtttgctct aaggcatctt tccacataaa
     1141 attaaaattt gcatagtatt ctacttcgtg attaggtata ggattgttaa tcaaatttag
     1201 agtaactaac atattttcat atgaaaaaat cacgccctct ttggtaaaat tttcatcagc
     1261 tatttttata ttaaatttat cttctaaaat gctttttaac tccgaaaaat taaaatcaac
     1321 ttcatcaaga agaacaaaag aggtaaaatt gtgatttaaa tctatagt
//
LOCUS       DAPIYB010000131         1327 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.132, whole genome shotgun sequence.
ACCESSION   DAPIYB010000131 DAPIYB010000000
VERSION     DAPIYB010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1327)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1327)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.132"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(17..1324)
                     /locus_tag="RJ318_001660"
     CDS             complement(17..1324)
                     /locus_tag="RJ318_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HDV7431491.1"
                     /translation="MILTLLTNPIIISVVLMTLLCLFRFNVLLSLLISALVAGVFSHL
                     ELVDTMNILISGMKENLKTALSYILLGAIAAAISKTNLTAYLIKIVSHFISHKKYLLL
                     LSIALISCFSQNLIPIHVAFIPLLIPPLLSLFNKLKIDRRAVACALTFGLTTPYMVLP
                     VGFGLTFQDLLKDNLNANNVSASLNDVTNTMYFAAICMIAGLFLALFVFYRKPREYQE
                     VEIAKVDLENLEMTRKEWGVLAGLVLTLILQILTMNLPLSGLLGFVLMVILGGVEFSK
                     VNEVFDDGLKMMGFIAFVILVAAGYGEVLKESGSVVDLVNSVVPWMEQSKFLAVFFML
                     LIGLIITMGIGTSFGTIPIIATLFCPICLELGFSTALIIFILGVAGALGDAGSPASET
                     TMGTTVGLNADKQHDHIKDTCIPTFIFYNGPLLILGSIIAMFL"
BASE COUNT          535 a          244 c          178 g          370 t
ORIGIN      
        1 aatagatttg caaaaattat aaaaacatgg cgataatact acctaaaatc aataatggac
       61 cattataaaa aataaaagtt ggtatgcaag tatctttaat gtgatcgtgt tgtttatcag
      121 catttaatcc tacagtagtt cccatggttg tttcactggc tggacttcct gcatctccta
      181 aagctcctgc tactcctaag ataaatataa taagtgctgt actaaaacca agctccaaac
      241 aaataggaca aaaaagcgta gctatgatag gtatagttcc aaaagaagta cctataccca
      301 tagtgatgat aagtcctatt aaaagcatga aaaatactgc taaaaattta ctttgttcca
      361 tccaaggaac gactgaattt acaagatcta ctactgatcc actttctttt aaaacttctc
      421 catatcctgc agcaacaagg ataacaaaag ctataaaacc catcatttta agcccatcat
      481 caaaaacttc attgactttt gaaaattcaa ctccacccaa aataaccatt aaaacaaaac
      541 ccaaaagccc tgataaaggt aaattcatag tcaaaatttg caaaattaaa gttaaaacaa
      601 gcccagctaa aacgccccat tccttacgcg tcatttcaag attttctaaa tccactttag
      661 caatttctac ttcttgatac tctcttggct tacgataaaa cacaaaaagc gctagaaaaa
      721 gtcctgctat catacaaata gcagcgaaat acatagtatt tgtaacatca tttaaagatg
      781 cacttacatt atttgcattt aaattatctt ttaaaagatc ttgaaaagta agcccaaaac
      841 ctactggcaa aaccatataa ggcgtagtaa gtccaaaagt taaagcacaa gcaaccgctc
      901 tacgatcgat tttaagttta ttaaaaagac ttaaaagagg tggaatcaac aaaggtataa
      961 aagctacatg aataggaatt aaattttgag aaaaacaaga aatcaaagct atagacaaaa
     1021 gcaataaata ttttttatga gatataaaat gacttactat cttaatcaaa tatgcagtta
     1081 aatttgtctt tgaaatcgct gcggcaatgg cccctaaaag tatatagcta agagctgttt
     1141 ttaaattttc tttcattccg cttataagta tattcatagt atctacgagt tcaagatgag
     1201 aaaatacacc tgcaacaaga gctgagatca aaagactcaa aagtacatta aaacgaaaca
     1261 aacaaagtaa agtcatcaaa acaacactga taatgatagg attagtaagt aaagtcaaaa
     1321 tcattcc
//
LOCUS       DAPIYB010000132         1278 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.133, whole genome shotgun sequence.
ACCESSION   DAPIYB010000132 DAPIYB010000000
VERSION     DAPIYB010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1278)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1278)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.133"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..>1278
                     /locus_tag="RJ318_001661"
     CDS             <1..>1278
                     /locus_tag="RJ318_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDV7431492.1"
                     /translation="FTTIQALFSLFKNERENSLSFEDLKDEKLVFLADEAHHLNSDTK
                     SKNENELKEGWEAIIKRAYESNNENLLFEFSATIPQEFNVLEKYQDKIIYEYTLREFC
                     KEGYSKRIFLVKYDNDSLEHRFLGAVLCSLYRELLAQKYNIILKPVVLLKSESIKESM
                     QNQEKFIDFIDNLESLHIEDFYKNINKESDLLNKSLEFFKKEYQNTYAKTIVNFLKNN
                     FKTLYMLNTNDDKELEKNQILLNSLEEKDNQIRVIFCVDKLNEGWDVLNLFDIVRLGN
                     KKASKTITTKEAQLIGRGARYYSFKSDLFDFDDEFRFKRKYDSDLENELNALEKLTYH
                     TRNDVEFIKQLNESMNKEGLLFEEEKTRIDLIVNEKIKEIIKNNKIYYANNKRIKKRD
                     LKNFYITRIEMEQKIKGLQIPYFSNSIKESEEKF"
BASE COUNT          548 a          109 c          203 g          418 t
ORIGIN      
        1 tttacaacta tacaagcttt attttctctt tttaaaaatg aaagagaaaa ttctttaagc
       61 tttgaagatt taaaagatga aaagcttgta tttttagctg atgaagctca tcatttaaat
      121 agtgatacta aaagcaaaaa cgaaaacgag cttaaagaag gttgggaagc tattataaaa
      181 agagcttatg aaagcaataa tgaaaattta ttatttgaat ttagtgctac tattccgcaa
      241 gaatttaatg ttttggagaa atatcaagat aaaattattt atgaatacac cttaagagaa
      301 ttttgcaaag agggatattc taaacgtata tttttagtta agtatgacaa tgatagttta
      361 gaacatagat ttttaggagc cgtgctttgt agtctttata gagagttgtt ggctcaaaaa
      421 tataatatca tattaaagcc tgttgtttta cttaagagtg aatctataaa agaatctatg
      481 caaaatcaag aaaaatttat agattttata gataatttag aaagcttgca tatagaagat
      541 ttttataaaa atataaacaa agaaagtgat cttttaaata aaagtttaga gttttttaaa
      601 aaagaatatc aaaatactta tgcaaaaact attgtaaatt ttttgaaaaa taattttaaa
      661 acgctttata tgttaaacac aaatgatgat aaagagctag aaaaaaatca aattttactt
      721 aatagcttag aagaaaaaga taatcaaata agagttattt tttgcgttga taaacttaat
      781 gaaggttggg atgttttaaa tctttttgat atagttaggc ttggaaataa aaaggcaagt
      841 aaaacaataa ccacaaagga agcacaactt ataggaagag gtgctagata ttattctttc
      901 aaaagcgatt tgtttgattt tgatgatgag tttagattta aaagaaagta tgatagtgat
      961 cttgaaaatg agttaaatgc tttagagaaa ttaacttatc atactagaaa tgatgttgag
     1021 tttatcaagc aactcaatga aagcatgaat aaagaaggat tattatttga ggaggaaaaa
     1081 acacgcatag atttaatagt caatgaaaaa ataaaagaga ttattaaaaa taacaaaatt
     1141 tattacgcta ataataaaag aatcaaaaag cgtgatttga aaaattttta cattacaaga
     1201 attgagatgg aacaaaaaat aaaaggtttg caaattcctt atttttcaaa ttctataaaa
     1261 gaaagtgagg agaaattt
//
LOCUS       DAPIYB010000133         1259 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.134, whole genome shotgun sequence.
ACCESSION   DAPIYB010000133 DAPIYB010000000
VERSION     DAPIYB010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.134"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..467)
                     /locus_tag="RJ318_001662"
     CDS             complement(<1..467)
                     /locus_tag="RJ318_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2,3 sialyltransferase"
                     /protein_id="HDV7431493.1"
                     /translation="MSMNINALVCGNGPSLKNIDYKRLPKQFDVFRCNQFYFEDRYFV
                     GKDVKYVFFNPFVFFEQYYTSKKLIQNEEYNIENIVCSTINLEYIDGFQFVDNFELYF
                     SDAFLGHEIIKKLKDFFAYIKYNEIYNRQRITSGVYMCATAVALGYKSIYISG"
     gene            522..>1259
                     /gene="wlaN"
                     /locus_tag="RJ318_001663"
     CDS             522..>1259
                     /gene="wlaN"
                     /locus_tag="RJ318_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1,3 galactosyltransferase"
                     /protein_id="HDV7431494.1"
                     /translation="MSQISIILPTYNVEKYIARALESCINQTFKDIEIIVVDDCGNDK
                     SIDIAKEYASKDDRIKIIHNEENLKLLRARYEGAKVATSPYIMFLDSDDYLELNACEE
                     CIKILDMGGGGKIDLLCFEAFITNAKKSIKKLNIKQGKYNNKEFTMQILKTKNPFWTM
                     WAKIIKKDIYLKAFNMLNLKKEIKINMAEDALLYYPLTILSNEIFYLTQPLYTQHVNS
                     NSITNNINSLEANIQEHKIVLNVLKSIK"
BASE COUNT          526 a          163 c          143 g          427 t
ORIGIN      
        1 ataccactta tatatatact tttatatccc agagccacag ctgtagcaca catataaact
       61 ccactagtaa ttctttgcct attgtatatt tcattatatt taatataggc aaaaaaatct
      121 ttaagctttt ttataatctc atgacctaaa aaagcatcac taaagtataa ttcaaaatta
      181 tcaacaaatt gaaatccatc tatgtattct aaattaatag tagaacaaac tatattttct
      241 atgttatatt cttcgttttg tataagtttt ttactagtat agtattgttc aaaaaacaca
      301 aaaggattaa aaaaaacata ttttacatct ttacccacaa aatatctatc ttcaaaataa
      361 aactgattgc atctaaatac atcaaattgt tttggtaacc ttttataatc tatatttttt
      421 aaactaggtc cattaccgca taccaaagca ttaatattca tactcatttt attaccttaa
      481 atttatagta taattatatc aaaaaaaaat aaagagctaa aatgagtcaa atttccatca
      541 tactaccaac ttataatgtg gaaaaatata ttgctagagc attagaaagt tgcattaacc
      601 aaacttttaa agatatagaa atcattgtag tagatgattg tggtaatgat aaaagtatag
      661 atatagctaa agagtatgct agtaaagatg atagaataaa aatcatacat aatgaagaga
      721 atttaaagct tttaagagca agatatgaag gtgctaaagt agcaacttca ccttatatca
      781 tgtttttaga ttctgatgat tatttagaac ttaatgcttg cgaagaatgt attaaaattt
      841 tggatatggg tggggggggt aaaattgatt tgttgtgttt tgaagctttt attaccaatg
      901 caaaaaaatc aataaaaaaa ttaaatataa aacaaggaaa atacaacaac aaagaattta
      961 caatgcaaat acttaaaact aaaaatccat tttggacaat gtgggctaaa ataatcaaaa
     1021 aagatattta tttaaaagcc ttcaacatgt taaatctcaa aaaagaaatc aaaataaata
     1081 tggcagaaga tgccttatta tattatcctt tgacaatatt atctaatgaa atattttact
     1141 taacacaacc tttgtatacc cagcatgtaa atagcaattc tataacaaat aatattaatt
     1201 ctttagaagc taatattcaa gaacataaaa ttgttttaaa tgttttaaaa tcaattaaa
//
LOCUS       DAPIYB010000134         1173 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.135, whole genome shotgun sequence.
ACCESSION   DAPIYB010000134 DAPIYB010000000
VERSION     DAPIYB010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.135"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            26..1057
                     /gene="pseI"
                     /locus_tag="RJ318_001664"
     CDS             26..1057
                     /gene="pseI"
                     /locus_tag="RJ318_001664"
                     /EC_number="2.5.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid synthase"
                     /protein_id="HDV7431495.1"
                     /translation="MQIGNFNTDKKVFIIAELSANHAGSLEMALQSIKAAKEAGADAI
                     KIQTYTPDSMTLNSNKEDFIIKGGLWDKRKLYELYQSAKTPYEWHSQIFETAQNEGIL
                     CFSSPFAKEDLEFLKRFDPIAYKIASFEANDENFVRLIAKEKKPTIVSTGIATEEELF
                     KICEIFKEEKNPDLIFLKCTSAYPTAIEDMNLKGIASLKEKFNVEVGLSDHSFGFLAP
                     VMAVALGARVIEKHFMLDKSIESEDSKFSLDFDEFKAMVDAVRQAESALGDGKLDLDE
                     KALKNRVFARSLYASKDIKKGEMFSEENVKSVRPSFGLHPKFYQELLGKKATKDIEFG
                     DALKQGDFQ"
BASE COUNT          445 a          167 c          216 g          345 t
ORIGIN      
        1 ggaaatttac caaagaaaga aaagtatgca aataggaaat tttaacaccg ataaaaaggt
       61 ttttatcata gcagaactta gtgcaaatca cgcaggaagt cttgagatgg cacttcaaag
      121 tataaaagct gccaaagaag caggtgctga tgcgataaaa attcaaactt acactccaga
      181 tagcatgact ctaaatagca acaaagaaga ttttattatt aagggtgggc tttgggataa
      241 aagaaaactt tatgagcttt atcaaagtgc aaaaacccct tatgaatggc attctcaaat
      301 ctttgaaacc gcacaaaatg aaggcatact ttgtttttca agtccttttg ccaaagaaga
      361 tttagaattt ctaaaacgct ttgatcctat agcctataaa atcgcttctt ttgaagctaa
      421 tgatgaaaat ttcgtgcgtt taatcgccaa agaaaaaaaa cctactatcg tttcaacggg
      481 cattgctaca gaagaagaac tttttaaaat ctgtgaaatt tttaaagaag aaaaaaatcc
      541 tgatttaatc tttttaaaat gcacttcggc ttatcctact gccatagaag atatgaattt
      601 aaaaggcata gcaagtttaa aagaaaaatt taatgttgaa gtggggctaa gtgatcatag
      661 ctttggtttt ttagcccctg ttatggcagt agcacttgga gctagagtga tagaaaagca
      721 ttttatgtta gataaaagca tagaaagtga agacagtaaa tttagtcttg attttgatga
      781 atttaaagct atggtagatg cagtaagaca agctgaaagt gctttaggcg atggtaagtt
      841 agatctagat gaaaaggcgc ttaaaaaccg tgtttttgca agaagcttat atgcaagtaa
      901 ggatatcaaa aaaggtgaaa tgttcagcga agaaaatgta aaatccgtgc gtccttcttt
      961 tggactacat cctaaatttt atcaagaact tttaggaaaa aaagctacta aagatataga
     1021 atttggtgat gctttaaaac aaggagattt ccaatgatct tcacccctac tcaaaaagaa
     1081 ctctttaaca aaaacattga ggctttaagt aatattcttt taaaagaaag tttaaaagaa
     1141 atcaagtcta gtaaatttga acttatctta ggt
//
LOCUS       DAPIYB010000135         1130 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.136, whole genome shotgun sequence.
ACCESSION   DAPIYB010000135 DAPIYB010000000
VERSION     DAPIYB010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.136"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..74
                     /locus_tag="RJ318_001665"
     CDS             <1..74
                     /locus_tag="RJ318_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="16S rRNA processing protein RimM"
                     /protein_id="HDV7431496.1"
                     /translation="KNIDIEKRQIFCTQDAFLILENS"
     gene            71..775
                     /gene="trmD"
                     /locus_tag="RJ318_001666"
     CDS             71..775
                     /gene="trmD"
                     /locus_tag="RJ318_001666"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDV7431497.1"
                     /translation="MKFSFVSLFPNLMEFYFQDSILARAKEKKLFKLNFYNPRDFSKN
                     SYHKVDDYKIGGGAGLLMQAEPMYEVLRSIQEKKENPYFIFLNPSGKTFNQKDAKRLS
                     KKEHIVFVCGRYEGIDERVLEIFANEVFSIGDFILTGGELPALVMCDAILRNVNGVLG
                     NMESLEEESFENNLLEAPAFSKPFIFEKKNKKFYTPSEFLKGNHARIASLKTTLASCK
                     TKFFRPDLFLEHERKK"
     gene            786..>1130
                     /gene="rplS"
                     /locus_tag="RJ318_001667"
     CDS             786..>1130
                     /gene="rplS"
                     /locus_tag="RJ318_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDV7431498.1"
                     /translation="MKNKYIEQFEAKQIEGKNVPDFRAGDTLKLAIRIKEGDKTRIQN
                     FEGICIARRGNGVSETFIVRKIGANNVGVERIFPIYSESLESITVLRRGRVRRARLFY
                     LRDRRGKAARIKE"
BASE COUNT          406 a          132 c          217 g          375 t
ORIGIN      
        1 ttaaaaatat agatatagaa aaacgacaga ttttttgcac gcaagatgct tttttaattt
       61 tagaaaattc atgaaattta gtttcgtttc tttgttccct aatcttatgg aattttactt
      121 tcaagattct atacttgcaa gagcaaaaga aaaaaaactt ttcaaactta atttttataa
      181 tccaagagat ttttctaaaa attcttatca taaagtcgat gattataaaa taggtggtgg
      241 agctggactt ttgatgcaag ctgaacctat gtatgaggtg ctaagaagta ttcaagaaaa
      301 aaaagaaaat ccctatttta tttttttaaa tccaagtggt aaaaccttta atcaaaaaga
      361 cgccaaacgc ttaagtaaaa aagaacatat agtttttgta tgtgggcgct atgaaggtat
      421 agatgaaaga gtgcttgaaa tttttgcgaa tgaagttttt agtatagggg attttatttt
      481 aactggagga gaattacctg cgcttgtaat gtgtgatgca attttaagaa atgttaacgg
      541 ggttttagga aatatggaaa gtttggaaga agaaagcttt gaaaataatt tactcgaagc
      601 gcctgctttt tcaaaacctt ttatttttga gaaaaaaaat aaaaaatttt atactccttc
      661 agagttttta aagggtaatc acgctagaat tgcaagttta aaaactactt tggcgtcttg
      721 caaaacgaaa ttttttcgtc cagatttatt tttagagcat gaacgcaaaa aataagggat
      781 tttttatgaa aaataaatat atagaacaat ttgaagcaaa acaaattgaa ggtaaaaatg
      841 ttccagattt tcgtgctggt gatactttaa agcttgcaat tcgcatcaaa gaaggagata
      901 aaacaagaat ccaaaatttt gagggtattt gtattgctag aagaggtaat ggcgtaagtg
      961 aaacttttat cgtgcgtaaa attggcgcta ataatgttgg cgttgagaga atttttccta
     1021 tttatagtga aagtttagaa agtattactg ttttgcgtcg tggtcgtgta cgccgtgcaa
     1081 gattattcta cttaagagat agacgcggta aagcagcgcg tattaaagag
//
LOCUS       DAPIYB010000136         1109 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.137, whole genome shotgun sequence.
ACCESSION   DAPIYB010000136 DAPIYB010000000
VERSION     DAPIYB010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.137"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..1086)
                     /locus_tag="RJ318_001668"
     CDS             complement(<1..1086)
                     /locus_tag="RJ318_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HDV7431499.1"
                     /translation="MKTSFLAHSVAIVRSNFKGLLFTACIVIFAMYLSSVQSIKDTTH
                     LAATAFAIIIGVLLSPWFFKYQHHFQAGVHFSAKKLLRLGIVLYGFNITLTELLSVGL
                     KGFLLSAIVIFFVFIIALFVGTKIFKLDKETSMLVGAGSAICGAAAVLALESSLKSDP
                     FKGILAVGTVVIFGLVFMFLYPIAFSLNLFPFFDQNAMGVFMGATLHEVANVAGAAEM
                     AKDMAGFEQGASNVAVIIKMMRVILLVPFLLIVTYFFAKNQHSSSGKTAKSITIPYFA
                     FAFLGMIVLNTYLASKESILGIATSDIISLGKTLCTLCIVFAMAALGLQIDFKKFLKS
                     GSRVFGLAFVLGLVLIFGGYFLTLAFKG"
BASE COUNT          441 a          227 c          142 g          299 t
ORIGIN      
        1 acctttaaaa gctaaggtta aaaaatatcc tccaaaaatc aaaacaagcc ctaaaacaaa
       61 agccaagcca aataccctag agccactttt taaaaatttt ttaaagtcaa tttgcaagcc
      121 taaagctgcc atagcaaaaa cgatacataa agtacaaagt gttttaccta aagagatgat
      181 atcgctcgta gcaataccta aaatactttc tttgcttgct aaataagtat ttaaaactat
      241 catgcctaaa aatgcaaaag caaaataagg tatagtgata ctttttgcag tttttccact
      301 gcttgaatgt tgatttttag cgaaaaaata agtcactata agcaaaaaag gcacaagtaa
      361 aatcactctc atcattttta taatcactgc aacattagaa gcaccttgct caaatcctgc
      421 catatccttt gccatttcag cagcacctgc gacatttgcc acctcatgca acgtagctcc
      481 cataaaaaca cccatagcat tttgatcaaa aaaaggaaaa agatttaaag aaaaagctat
      541 gggatataag aacataaata caagtccaaa aatcaccacc gtacctacag ctaaaattcc
      601 cttaaaagga tcacttttca aacttgactc tagtgctaaa accgctgccg caccgcaaat
      661 cgcacttcca gctccaacaa gcatagaagt ttctttatcg agtttaaaaa ttttcgttcc
      721 cacaaataaa gcaataataa aaacaaaaaa tatcactata gcagaaagca aaaatccttt
      781 caatcctaca cttaaaagct cagttaaagt gatattaaaa ccatataaaa caatgccaag
      841 tcttaaaagt tttttcgcac taaaatgcac tccggcttga aaatgatgtt ggtatttaaa
      901 aaaccaagga gaaagcaaca ctcctatgat aatagcaaaa gcagtcgctg ctaaatgagt
      961 ggtatctttg atactttgaa cactagaaag atacatagca aaaatcacta tacaagcagt
     1021 aaaaagcaaa cccttaaaat ttgatcgcac tatagccacg ctatgtgcta aaaaacttgt
     1081 tttcatttat tttccttttt gtaaatttt
//
LOCUS       DAPIYB010000137         1046 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.138, whole genome shotgun sequence.
ACCESSION   DAPIYB010000137 DAPIYB010000000
VERSION     DAPIYB010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.138"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            103..951
                     /locus_tag="RJ318_001669"
                     /pseudo
     CDS             103..951
                     /locus_tag="RJ318_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344817.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
BASE COUNT          391 a          111 c          160 g          384 t
ORIGIN      
        1 gaatcaaata aaggaaaata ttcgaaaatt actcctattg attttttata taatcaaatt
       61 atttctttta aaacccaccc taatatattt aattttcaaa gcataaatcc aatcggtatt
      121 taccgattgg atttattaag aacaaatcaa attaagttaa acgaaactcc aggagcttcc
      181 tatcaagaca atggtttatg gtttcaaatt tttgctcttg ctaaaagtat ttattttatt
      241 aatgaagcat tttatatgct tagaagagat aatcctaatt catccgtaaa aagcaaagaa
      301 aaagtatatt gtgcatgtga agaatatgat tttattcgag attttttaaa aaaacatcct
      361 gatcttgaaa aaacacttgc tccaatatgt gctttgcatc gttttggaaa ttatatgttt
      421 actttagaaa gaatcgatga aagatataag ttggattttt taaaaagatt ttcgcaagat
      481 tttcgcaaga ttttaaaaga taaagagctt gatgagaatt tattcggaaa tataaatatg
      541 caaagaatta ataaaataat tgaaaatcct gtaatatatt attatttttc tagaggagct
      601 agagctcgtt tgcaaaacca gctggtatat agattgggta aagttgttgt tgaggcaaag
      661 tcatttaata aaattattaa attacctttt cttatgctca aaatttgcct tgagcataat
      721 tttgagcata aagtttatag gtctattgta caatttagac cagatttgaa gcttcttcca
      781 ttagagtgtt atttggatta tcatgaagca ttagttataa aagagcattt atcttataaa
      841 tttggaaaat tgattttgct ttcttttaag ggatggtata aagggaagat ttttattttg
      901 ccatttatgt taaaaaaaag atataaggaa tataagaata agatgatata atatttttgg
      961 cagtttgttt taaaggatgt tttaatgcag cgatttaaaa aatggttttt gtctatcata
     1021 aaaaatttca agcaacatga aaaaat
//
LOCUS       DAPIYB010000138         1035 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.139, whole genome shotgun sequence.
ACCESSION   DAPIYB010000138 DAPIYB010000000
VERSION     DAPIYB010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.139"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..956)
                     /locus_tag="RJ318_001670"
     CDS             complement(<1..956)
                     /locus_tag="RJ318_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDV7431500.1"
                     /translation="MQSINSGKSVGISAKLTLWVGILVVLILAITSAISYFDSRNNTY
                     ELLKDTQLKTMQDVDAFFKSYAMSKRNGIQILANELTNRPDMSDEELINLIKVIKKVN
                     DYDLVYVGFDNTGKNYQSDDQILDLSKGYDTKNRPWYKAAKEAKKLIVTEPYKSAASG
                     EVGLTYAAPFYDRNGNFRGVVGGDYDLANFSTNVLTVGKSDNTFTEVLDSEGTILFND
                     EVAKILTKTELSINIANAIKANPALIDPRNQDTLFTAKDHQGVDYAIMCNSAFNPLFR
                     ICTITENKVYTEAVNSILMKQVIVGIIAIIIALILIRFLISR"
BASE COUNT          346 a          164 c          145 g          380 t
ORIGIN      
        1 cttctgctga ttaaaaatct aatcaagatt aaagctatga ttatagctat aataccaact
       61 ataacttgtt tcattaaaat agaattaaca gcttcggtat aaactttgtt ttctgttatt
      121 gtacaaattc taaataaagg attaaaagca gaattacaca taatcgcata atctacgcct
      181 tggtgatctt tagcggtaaa taaagtatct tggtttcttg gatcaataag agcaggattt
      241 gctttgattg cattggcgat attgatactt aattctgttt ttgttagtat tttagcaact
      301 tcatcattaa aaagtattgt tccttctgaa tcaagtactt cagtaaaggt attgtctgat
      361 tttcctacag ttaaaacatt ggttgaaaaa tttgctagat cataatctcc acctacaaca
      421 cctctaaaat ttccatttct atcataaaat ggagcagcgt aagttaaacc aacctctccg
      481 ctagcggcgg atttataagg ttctgttact ataagctttt ttgcttcttt ggcagcttta
      541 taccaaggac gatttttagt atcataacct tttgatagat ctaaaatttg atcatcagat
      601 tgataatttt ttcctgtatt atcaaatcct acataaacta gatcgtagtc attaactttt
      661 ttaattactt tgataagatt gattagctct tcatcgctca tatcaggacg atttgttagc
      721 tcattggcta gtatttgaat accatttctt tttgacatag catagctttt aaagaaagca
      781 tccacatctt gcatagtttt taactgagtg tcttttagca attcatatgt attgtttctc
      841 gaatcaaagt aactaatagc acttgtgatt gctaaaatta atacaactaa aattccaacc
      901 catagcgtaa gcttagctga aattccaacg gatttgcctg aatttattga ttgcattata
      961 actcctatat ttatattgaa aatgaaataa aaatattatt ctagcaaaaa ataagagaaa
     1021 aagtgtataa aaaat
//
LOCUS       DAPIYB010000139         1006 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.140, whole genome shotgun sequence.
ACCESSION   DAPIYB010000139 DAPIYB010000000
VERSION     DAPIYB010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.140"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            9..368
                     /locus_tag="RJ318_001671"
     CDS             9..368
                     /locus_tag="RJ318_001671"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-R-sulfoxide reductase"
                     /protein_id="HDV7431501.1"
                     /translation="MKELNEEEKKVILNKGTEAPFSGKYNDFYEKGIYQCKQCGASLY
                     KSEDKFKSGCGWPSFDDEIKGAVKRIPDKDGIRTEIVCANCNGHLGHVFEGEGFSAKN
                     VRHCVNSISLEFVKTKD"
     gene            383..>1006
                     /locus_tag="RJ318_001672"
     CDS             383..>1006
                     /locus_tag="RJ318_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HDV7431502.1"
                     /translation="MGSELYLMFFAAITLLAILNPFGNLTQFLAMSDGLPLMLRKKLF
                     RTILYTAFTIVLVFLLSGPLFMNYIFRVSLDDLRVSGGLVLIIMAIKNLLFSTKIATK
                     DFSPYQDMDDKEILRQSLIPMAFPMLVGPGTLASVIVIAEDGGLDVALGGVMIAFIFM
                     FILFHFAATIEKIVGKLILHVFSRIAQVFIVAMGFKMIIVGLKDIFNL"
BASE COUNT          312 a          104 c          200 g          390 t
ORIGIN      
        1 ggtagatcat gaaagaatta aatgaagaag aaaaaaaagt aattttaaat aaaggaacag
       61 aagctccttt tagtgggaaa tataatgatt tttatgaaaa gggaatctat caatgcaaac
      121 aatgtggagc ttcgctttat aaatccgaag ataaatttaa atcaggttgt ggatggccta
      181 gctttgatga tgaaataaaa ggggctgtta aaagaattcc tgataaagat gggattagaa
      241 ccgagattgt atgtgcaaat tgcaatggac atttaggtca tgtttttgaa ggagaaggat
      301 tttctgctaa aaatgtaaga cattgtgtaa attctatttc tttggaattt gtaaaaacta
      361 aggattgata gtgttttcta gtatgggttc tgagctttat ttgatgtttt ttgctgcaat
      421 tactttactt gctatattaa atccttttgg taatttaact caatttttgg ctatgagtga
      481 tggattgcct ttaatgcttc gaaaaaaact ttttagaact attctctata cagcttttac
      541 tatagttttg gtgtttttat tatcaggacc tttatttatg aactatattt ttagagtttc
      601 attggatgat ttaagggttt ctggtggttt ggttcttatt ataatggcta ttaaaaattt
      661 acttttttca acaaaaattg caactaagga ttttagtcct tatcaagata tggatgataa
      721 ggaaatttta agacagagtt taatacctat ggcatttcct atgcttgttg ggcctggaac
      781 tttagctagc gttattgtta tagccgaaga tggtgggctt gatgttgctc ttggcggagt
      841 aatgatagct tttattttta tgtttatact ttttcatttt gcagctacta tagaaaaaat
      901 agttggaaaa ttgattttac atgttttttc tcgtatagca caagtattta ttgttgctat
      961 ggggtttaag atgattattg taggtttaaa ggatatattt aactta
//
LOCUS       DAPIYB010000140          989 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.141, whole genome shotgun sequence.
ACCESSION   DAPIYB010000140 DAPIYB010000000
VERSION     DAPIYB010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.141"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..>989
                     /locus_tag="RJ318_001673"
     CDS             <1..>989
                     /locus_tag="RJ318_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDV7431503.1"
                     /translation="QTGLTSFFDFINYKTKNVSTIEVKSNDEFGQISNAINENILATK
                     RGLEQDNQAVKESVQTVSVVEGGNLTARITANPRNPQLIELKNVLNKLLDVLQARVGS
                     DMNAIHKIFEEYKSLDFRNKLENASGSVELTTNALGDEIVKMLKQSSDFANALANESG
                     KLQTAVQSLTTSSNSQAQSLEETAAALEEITSSMQNVSVKTSDVITQSEEIKNVTGII
                     GDIADQINLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANTNLLVQ
                     SINDMAESIKEQTAGITQINDSVAQIDQTTKDNVEIANESAIISSTVSDIANN"
BASE COUNT          381 a          143 c          165 g          300 t
ORIGIN      
        1 caaacaggtt taacttcatt ctttgatttt atcaactata aaacaaaaaa tgtttctact
       61 atagaagtaa aaagcaatga tgaatttgga caaatctcaa atgctatcaa tgaaaacatt
      121 cttgctacta aaagaggctt agaacaagac aatcaagccg ttaaagaatc agttcaaacc
      181 gtatcagttg tagaaggtgg taatttaaca gcaagaatta ctgctaatcc aagaaaccca
      241 cagcttattg aacttaaaaa tgttctaaat aaacttcttg atgttttaca agctagagta
      301 ggttctgata tgaatgctat tcataaaatt tttgaagaat acaaaagctt agactttaga
      361 aataaattag aaaatgctag cggtagtgta gaattaacta ctaatgcttt aggtgatgaa
      421 atagttaaaa tgctaaaaca aagttcagac tttgctaatg ctttagctaa tgaaagtgga
      481 aaattacaaa ctgctgttca aagcttaacc acttcttcaa attctcaagc tcaatcttta
      541 gaagaaactg cagcagcttt agaagagatc acttcttcta tgcaaaatgt ttcagttaaa
      601 actagtgatg ttatcactca atctgaagag attaaaaatg ttacaggtat tataggtgat
      661 attgcagatc aaatcaatct tttagcttta aatgcagcta ttgaagcagc tcgtgctgga
      721 gaacatggta gaggctttgc agtggtagct gatgaagtta gaaagttagc tgaaagaact
      781 caaaagtctt tatcagaaat tgaagctaat actaatttac ttgttcaatc tatcaatgat
      841 atggcagaaa gtattaaaga acaaactgca ggtatcactc aaatcaatga tagcgtagct
      901 caaattgatc aaactactaa agataatgtt gaaattgcta atgaatcagc tattatttct
      961 agtacagtaa gtgatatagc taataatat
//
LOCUS       DAPIYB010000141          907 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.142, whole genome shotgun sequence.
ACCESSION   DAPIYB010000141 DAPIYB010000000
VERSION     DAPIYB010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 907)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 907)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.142"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            39..638
                     /locus_tag="RJ318_001674"
     CDS             39..638
                     /locus_tag="RJ318_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HDV7431504.1"
                     /translation="MLPKWDNSYSVHNAKIDEQHKKLFKLAAKVEVVSDRSVSKNEVK
                     ELLAEFFNYMKDHFNDEEKYMQLIGYPNLEEHRKIHKEIIQTMINLIKDIKSTNDLKE
                     KLYIVAKKWLLEHILYEDMKVEKWRSSSLSTDDGGDVSFEAAEDEDNEHPQFYLYTCN
                     CPGKIHDVPYSIHQKIELQGRKFTCKTCKQAIKFYKKYS"
     gene            649..897
                     /locus_tag="RJ318_001675"
     CDS             649..897
                     /locus_tag="RJ318_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HDV7431505.1"
                     /translation="MKRNVKTYSFRMPLELKERLDNLSKNLSKPKSTIVKEAIEAYLN
                     EVEDFSFAVNALEELKDGDYQKASKKIDKIVKNLKQTK"
BASE COUNT          376 a          118 c          142 g          271 t
ORIGIN      
        1 tcctttcata caaataaatt tttccttaag gagttaaaat gcttccaaaa tgggataaca
       61 gctatagtgt gcacaatgct aaaattgatg agcagcataa aaagcttttt aaacttgctg
      121 caaaagttga agttgtatca gatagatctg taagtaaaaa tgaagtcaaa gaacttttgg
      181 ctgaattttt taattatatg aaagatcact ttaatgatga agaaaaatac atgcagctaa
      241 taggctatcc aaatttagaa gaacatcgaa aaatacataa agaaatcatc caaaccatga
      301 ttaatttaat caaagatatc aaatcaacca atgatcttaa agaaaaactt tatatagtgg
      361 ctaaaaagtg gcttttagaa cacatactat atgaagacat gaaagttgaa aaatggagaa
      421 gttcttcttt gtctacagat gatggtggcg atgttagctt tgaagcagca gaagatgaag
      481 ataatgagca tccacaattt tatctttata cctgtaattg tcctggtaaa attcacgatg
      541 ttccttatag cattcatcaa aaaatagaat tacaaggtcg taaatttact tgtaaaactt
      601 gtaaacaagc tataaaattt tacaaaaaat attcttaagg aggataaaat gaaacgcaat
      661 gtaaaaactt attcttttag aatgccttta gagcttaagg agcgtttgga taatttaagt
      721 aaaaatcttt ctaaaccaaa atcaaccata gtaaaagaag ccatagaggc ttatcttaat
      781 gaagttgaag atttttcttt tgctgttaat gccctagaag aacttaaaga tggggattat
      841 caaaaggcaa gtaaaaaaat agataaaatt gtcaaaaatc ttaaacaaac aaaataaaaa
      901 actttat
//
LOCUS       DAPIYB010000142          906 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.143, whole genome shotgun sequence.
ACCESSION   DAPIYB010000142 DAPIYB010000000
VERSION     DAPIYB010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 906)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 906)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.143"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..>906
                     /locus_tag="RJ318_001676"
     CDS             <1..>906
                     /locus_tag="RJ318_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7431506.1"
                     /translation="LKNKTQTIKENSLIEFNIEGNNPYEIYTVYKSYKAFNNEQDLTN
                     FTYPIIDYIIFLDSDDYWELNCIEECVPRMDGVDVVWFDSIEYHDIEKSYFKHHSRLK
                     DINIKKECRINPIEWLKLLRQNKIKDFAFAWSGIIDFDYIKDKKMKFKDAIFAEDHLF
                     GILLFSQAKNIYVYPKVFYYYRIRANSLTNQDKKITKDNILPYFKDIFIAFEENATLA
                     KEYFKYVSWVETSLELVRFVENYHDKKISSLLKDTILYFYIKNAFKIKKFDKDPLCIK
                     EKLQLLKPYKISKIRYKVMKFLISL"
BASE COUNT          369 a           86 c          128 g          323 t
ORIGIN      
        1 aactcaaaaa taaaactcaa actataaaag aaaattcttt aatagaattt aacatagaag
       61 gtaataatcc ttatgaaata tatactgtat ataaaagcta taaagctttt aataatgaac
      121 aagatttaac taactttact tatcctatta tagattatat catcttttta gattctgatg
      181 attattggga attaaactgc atagaagaat gtgtacctag aatggatggg gtagatgtgg
      241 tttggtttga tagtattgaa tatcatgata tagaaaaaag ttatttcaag catcatagtc
      301 gtttaaaaga tattaatata aagaaagaat gtagaataaa tcctatagag tggcttaagc
      361 ttctaaggca aaataaaatt aaagactttg catttgcgtg gagtggcata attgattttg
      421 attatataaa agataaaaaa atgaaattta aagacgctat ttttgctgaa gatcatttat
      481 ttggaatttt gcttttttcg caagctaaaa atatttatgt ctatcctaaa gtattttatt
      541 attatagaat tcgagctaat tctttgacaa atcaagataa aaaaatcact aaagataata
      601 tacttccata ttttaaagat atatttattg catttgaaga gaatgcaact ttagcaaaag
      661 agtattttaa atatgttagt tgggtggaaa ccagtttaga attagtgcga tttgtagaaa
      721 attatcatga taaaaaaatt tcttcgttgc tgaaagatac tattttgtat ttttatatca
      781 aaaatgcatt taaaattaaa aaattcgata aagatccttt gtgtattaaa gagaaattgc
      841 aactattaaa accctataaa atttcaaaaa taagatataa agttatgaaa tttttaatat
      901 ctttac
//
LOCUS       DAPIYB010000143          906 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.144, whole genome shotgun sequence.
ACCESSION   DAPIYB010000143 DAPIYB010000000
VERSION     DAPIYB010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 906)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 906)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.144"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..194)
                     /locus_tag="RJ318_001677"
     CDS             complement(<1..194)
                     /locus_tag="RJ318_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDV7431507.1"
                     /translation="MSLALTFRPENFDDILGQYELIEIFKKFTALQKLPHSIFFGTAG
                     SGKTTFARVVAKEFGLDFYE"
     gene            complement(194..>906)
                     /locus_tag="RJ318_001678"
     CDS             complement(194..>906)
                     /locus_tag="RJ318_001678"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431508.1"
                     /translation="INGGYIEVLMNKNLEIKNMKIHFDMINFSQFYTKFVLQNLNYEQ
                     FFNNPVQFYELNLFSDSQQEINFDYLVLDNNKINSFYSKNQVNFNEENSAVNLNIQGK
                     SNEIDLKSLLGQNLNFDKTKFNITINKFFNSNFNISHFIQKNLDLKIQNLILEKNKQN
                     ISLQGNLNINNSYQAKLQVISSDEPDEIFPWTKDYGGLNQYFLKENNNFFLNLSYDSL
                     ANPQLKINGSEFSNMDLN"
BASE COUNT          322 a          105 c          113 g          366 t
ORIGIN      
        1 aattcataaa aatctaagcc aaattctttt gctacaactc tagcaaaagt tgtttttcca
       61 gaacctgctg ttccaaaaaa aatactatga ggaagttttt gtaaagcagt aaattttttg
      121 aaaatttcta taagctcata ttgtcctaaa atatcatcaa aattttcagg gcgaaaggtc
      181 aaagctaggc tcattaattt aaatccatat ttgaaaattc actaccatta atttttagtt
      241 gaggattggc caagctatca taagataaat ttagaaaaaa gttattattt tcttttaaaa
      301 aatattgatt taaacctcca taatcctttg tccaaggaaa aatttcatca ggctcgtctg
      361 aactgataac ttgtaatttt gcttgataag agttgttaat atttaaattg ccttgtaaac
      421 tgatattttg tttatttttt tcaaggatta aattttgtat ttttagatca agattttttt
      481 gaataaaatg agagatattg aaatttgaat taaaaaattt gtttatggtt atattaaatt
      541 ttgttttgtc aaaattcaaa ttctgaccca ataaagattt aagatcaatt tcattggatt
      601 ttccttgtat gtttaagttt actgctgaat tttcttcatt aaaatttact tggtttttgc
      661 tgtaaaaaga attgatttta ttgttatcta gcacaagata atcaaagttg atctcttgtt
      721 ggctatcgct aaataaattt aactcataaa attgtacagg attgttaaaa aattgttcgt
      781 aatttaaatt ttgtaataca aatttagtat aaaattgaga aaaattaatc atatcaaaat
      841 gtattttcat gtttttaatt tctaaatttt tattcattaa aacttcaata tatccgccgt
      901 ttatga
//
LOCUS       DAPIYB010000144          885 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.145, whole genome shotgun sequence.
ACCESSION   DAPIYB010000144 DAPIYB010000000
VERSION     DAPIYB010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 885)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 885)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.145"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..>885)
                     /locus_tag="RJ318_001679"
     CDS             complement(<1..>885)
                     /locus_tag="RJ318_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7431509.1"
                     /translation="QHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDY
                     NELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDAL
                     QGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATI
                     FCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIIFICAGVVHPKAIE
                     YLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQD
                     LAYAENGNSHPDDYQNSA"
BASE COUNT          341 a          127 c          117 g          300 t
ORIGIN      
        1 ttagctgaat tttgataatc atcaggatga gaattgccat tttcagcata agctaaatcc
       61 tgtcctataa aaatgatgtt tttatgattg agtagaaccg aaagaaaata tgacatatgt
      121 gcaacgctag gtgtattgta taaaaaatca aaatatttaa gctttatata gattggaaaa
      181 tataaatatc ttggtatgat aagatatttt ctatttctac cctttaaata ctcaatcgcc
      241 tttggatgaa caacaccagc acaaataaat ataatatcct tatcaaattc tccaaaatca
      301 tgattaaaaa actcagcagt aatttcagtt ctttctagca tacaaacata atcaggcttt
      361 ataccatgtt tagctaaaat aggataagaa gaatccgcac aaaaaattgt agctttgcta
      421 gcatactttt ttaataaagg aagttgttta gtaagagatg gtcctgtaga aacaatgata
      481 gctgtatcac ttataccctt tcttttagaa agcaattctt tataactagg atgggtaatc
      541 atttgaggaa gattataaac aaattgctct atgccttgaa gagcatcaag aggatcatta
      601 ccatgagaaa caatagaatt tttaaaattt tctgctaatt tcttatttaa ctccaaaaca
      661 tcttcatgaa atctttcata ataatgactc atcagttcta aaaaataaat tctagaaaat
      721 tgaaagaaag gtttaaaaga acaaagttca ttataatctt gaatttctag tttatttgta
      781 ttcaaaacta tcaatcttgc attttgcaat tcatgtgaaa aatctaagat atgaaacatt
      841 atccaaatga tttctatatc tttttcaaaa acaacaatat gttga
//
LOCUS       DAPIYB010000145          883 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.146, whole genome shotgun sequence.
ACCESSION   DAPIYB010000145 DAPIYB010000000
VERSION     DAPIYB010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.146"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..>883
                     /locus_tag="RJ318_001680"
     CDS             <1..>883
                     /locus_tag="RJ318_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase component I
                     family protein/class IV aminotransferase"
                     /protein_id="HDV7431510.1"
                     /translation="EFINFLDQDNYKKNFIKVKEAISKGRVYQINLTQNFKFHSKMDS
                     FELFKLLLSRQDTEFKAFIKDETREILSFSPELFFKTKKRKIFTKPMKGTIKRDKDPI
                     KDEENKIFLQNDTKNLSENVMICDLLRNDLSKIITKKSLKTKLFEIQSHPTLHQMTSS
                     VQGKLKKNISLYQIFKALFPCGSITGAPKLESIKFIEELEQRDRGIYCGTIGLIHKNK
                     NKFNVAIRTLEKQDEIYTYSTGSGLVWDSKFKDEFEELKLKSAILNPYDFHLFETMYF
                     KNSQILFLKEHLLRLINS"
BASE COUNT          365 a          126 c          109 g          283 t
ORIGIN      
        1 gaatttataa attttttaga tcaagataat tacaaaaaaa atttcattaa agttaaagag
       61 gcaatctcca aaggaagagt ttatcaaatc aacctcactc aaaattttaa atttcatagc
      121 aaaatggatt cttttgaact ttttaaactt ttgctttcta gacaagatac tgaatttaaa
      181 gcttttataa aagatgaaac aagagaaatt ttatccttct ctcctgaact tttcttcaaa
      241 accaaaaaaa gaaaaatatt tacaaaacct atgaaaggca caattaagcg tgataaagat
      301 cctataaaag atgaagaaaa taaaattttc ttgcaaaatg atacaaaaaa tctaagtgaa
      361 aatgttatga tttgcgatct tttacgcaac gatctttcaa aaatcatcac aaaaaaaagc
      421 ttaaaaacca aactttttga aattcaaagt caccctactt tacatcaaat gacttcaagt
      481 gtacaaggaa aacttaaaaa aaatatttct ttatatcaaa tttttaaagc tctctttcct
      541 tgtggttcta ttacaggtgc tccaaagctt gaaagcatta aatttattga agaattagaa
      601 caaagagatc gtggtattta ctgcggaacc ataggtttaa tacataaaaa taaaaataaa
      661 tttaacgtag ccatacgcac cttagaaaaa caagatgaaa tttatactta tagcacaggt
      721 agtggcttgg tttgggactc aaaattcaaa gatgaatttg aagaattaaa acttaaaagc
      781 gcgatcttaa atccttatga ttttcatctt tttgaaacca tgtattttaa aaattctcaa
      841 attttatttt taaaagaaca cttgttaagg cttataaatt cag
//
LOCUS       DAPIYB010000146          775 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.147, whole genome shotgun sequence.
ACCESSION   DAPIYB010000146 DAPIYB010000000
VERSION     DAPIYB010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.147"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..445
                     /locus_tag="RJ318_001681"
     CDS             <1..445
                     /locus_tag="RJ318_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431511.1"
                     /translation="LSMMILLFKDFIEYKQNKEIQNKNFIIQEEISKLKQDKQKLLTN
                     IQDLNFTLSNKISSTQQQFHILSTITKEINLDKNKAIILNQIISWLNSNDLKITNLEF
                     EQTKIILSFIDENHFKRALENLNSAFKILDKNEETFNIILEVIHE"
     gene            438..>775
                     /locus_tag="RJ318_001682"
     CDS             438..>775
                     /locus_tag="RJ318_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431512.1"
                     /translation="MNKIEVFLQNLNPREKFLFISFICLCALFLAFKIHDHFLEDIFQ
                     KTLVEHNYLALNEAKIENSHLKEIETKLTKQIKIEEEKLKYYKEKLHLFSYDKDFFNK
                     KINNLSKNLI"
BASE COUNT          351 a          101 c           69 g          254 t
ORIGIN      
        1 tcttagcatg atgattttat tatttaaaga ttttatagag tacaaacaaa ataaggaaat
       61 tcaaaataaa aattttatca tacaagaaga aatttctaaa ctaaaacaag ataagcaaaa
      121 attattaaca aacatacaag atttaaactt tactctttcc aataaaatat catctacaca
      181 acaacaattt catattttat ccaccataac aaaagaaatc aatttagaca aaaataaggc
      241 aatcattcta aatcaaatca tatcatggct taactccaat gaccttaaaa tcacaaatct
      301 tgaatttgaa caaacaaaaa tcattctttc ttttatcgat gaaaaccact ttaaaagagc
      361 attagaaaat ctaaattctg cttttaaaat tcttgataaa aatgaagaaa catttaatat
      421 catattagaa gtcatacatg aataaaatag aagtattttt gcagaattta aatcctaggg
      481 aaaaatttct ttttatttct tttatctgtc tttgtgcttt gtttttagct tttaaaattc
      541 acgatcactt tttggaagat atttttcaaa aaacattagt agaacataat taccttgcat
      601 taaatgaagc aaaaatagaa aattcacatc ttaaagaaat agagacaaag ctaacaaaac
      661 agataaaaat agaggaagaa aaattaaaat actataaaga aaaattgcat ttattttctt
      721 atgataaaga ttttttcaat aaaaaaatca ataatttatc caaaaattta atcat
//
LOCUS       DAPIYB010000147          695 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.148, whole genome shotgun sequence.
ACCESSION   DAPIYB010000147 DAPIYB010000000
VERSION     DAPIYB010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 695)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.148"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..>695)
                     /locus_tag="RJ318_001683"
     CDS             complement(<1..>695)
                     /locus_tag="RJ318_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2972 domain-containing protein"
                     /protein_id="HDV7431513.1"
                     /translation="NYEFMWFFSHGAGAFTLGQFFYHLFKINILDYFCGGDGDIRYYK
                     FYNKLLELKDKRNIITINDIDPSWYGNQHKRDKLFSSFQKITPILFQIRDPIELIKHA
                     YGRKWGNNLAKTKEFDLSYQFNDIITEVEVYNYNLPNTLEGQRPQSFLWKSLIECFDK
                     FNDCFYLDISKIRGEETIHTLNYLSNKFNLKQIKINDKEFVTKSYFKGNLYFLLPLTL
                     YLNKEDLNTNIPN"
BASE COUNT          255 a          105 c           68 g          267 t
ORIGIN      
        1 tattcggaat atttgtattt aagtcttctt tatttaaata caaagtcaaa ggcaatagaa
       61 aatataaatt tcctttaaag taactttttg ttacaaactc tttatcgtta atcttaattt
      121 gtttcaaatt aaatttattt gatagataat ttaatgtgtg aatagtttct tcacctctta
      181 tctttgagat atctaaataa aaacaatcat taaatttatc aaaacattcg attaaagatt
      241 tccataaaaa cgattgcggc ctttgtcctt ccaaagtatt aggcaaatta taattatata
      301 cttctacttc cgttatgata tcattaaatt gataactcaa atcaaattct tttgttttgg
      361 ctaaattatt tccccatttt ctaccataag catgtttaat caattctata ggatccctta
      421 tctgaaatag aataggagtt attttttgaa aagatgaaaa taatttatct cttttatgct
      481 gattgccata ccatgatggg tctatatcat ttatagtaat aatatttctt ttatctttta
      541 attctaacaa tttattataa aatttataat aacggatatc cccgtctcct ccacaaaaat
      601 aatccaatat attaatttta aacaaatgat aaaaaaattg acctaaagta aacgcgccag
      661 caccatggct aaaaaaccac ataaactcat aattg
//
LOCUS       DAPIYB010000148          682 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.149, whole genome shotgun sequence.
ACCESSION   DAPIYB010000148 DAPIYB010000000
VERSION     DAPIYB010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 682)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.149"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            5..>682
                     /gene="ung"
                     /locus_tag="RJ318_001684"
     CDS             5..>682
                     /gene="ung"
                     /locus_tag="RJ318_001684"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006801829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDV7431514.1"
                     /translation="MNIDKIKINDDWKEFLRDEFQKKYFLEIKKQYLNAINQNIIIYP
                     PANLIFNAFNLCPLKEIKIIILGQDPYHQPNQAMGLSFSVPKNVKIPPSLNNIFKELQ
                     NDLNITPAKSGDLSSWAKQGVLLLNSILSVEANKAASHSSWGWQEFSDAIIHKLSNEK
                     SGLVFMLWGNYAKNKEILIDNTKHLILKAAHPSPLARTGFLGCKHFSKANEFLKKVGK
                     IPIDWKIV"
BASE COUNT          269 a           92 c          106 g          215 t
ORIGIN      
        1 tacaataaac atagataaga ttaaaataaa tgatgactgg aaagaatttt taagagacga
       61 atttcaaaaa aaatattttc tagaaatcaa aaaacaatac ctaaatgcga ttaatcaaaa
      121 tataattatt tatccacctg cgaatttaat ctttaatgct tttaatttat gtcctttaaa
      181 agaaattaaa attattatcc taggacaaga tccttatcat caaccaaatc aagcaatggg
      241 gcttagtttt tcggttccaa aaaatgtaaa aatcccacca agtcttaata atatttttaa
      301 agaattgcaa aatgatttaa acatcactcc agcaaaaagc ggagatttaa gctcttgggc
      361 aaaacaagga gttttgctct taaattctat tcttagcgtt gaagcaaata aagcagctag
      421 ccatagttcg tggggttggc aagaatttag tgatgctata atacataaat taagtaatga
      481 aaaatcaggg cttgttttta tgctttgggg aaattacgca aaaaacaagg agattttgat
      541 tgataatact aagcatttga ttttaaaagc agctcaccca agccctttag ctagaacagg
      601 atttttaggt tgtaagcatt tttcaaaggc taatgaattt ttaaaaaaag ttggtaaaat
      661 tcctatagat tggaaaatag tt
//
LOCUS       DAPIYB010000149          654 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.150, whole genome shotgun sequence.
ACCESSION   DAPIYB010000149 DAPIYB010000000
VERSION     DAPIYB010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 654)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 654)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.150"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            33..443
                     /gene="perR"
                     /locus_tag="RJ318_001685"
     CDS             33..443
                     /gene="perR"
                     /locus_tag="RJ318_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HDV7431515.1"
                     /translation="MELLQMLKKHELKATPQRLCVLKILKRHEHPNIDELYTEIKKEY
                     PSISLATVYKNLNTLQEQGLVVEINVLNQKTCYDIYEEEHIHVVCTKCGGIEDLSFKD
                     AKLYEYQEHLEKKIGNLVNHLSVCAYVDNCKKCH"
BASE COUNT          263 a           76 c           89 g          226 t
ORIGIN      
        1 atttttactt aaaaaagcaa ggaataaata aaatggaatt actacaaatg cttaaaaaac
       61 atgagttaaa agctactccg caaagactat gtgttttaaa aattttaaaa agacatgagc
      121 atcctaatat tgatgaatta tatacagaaa ttaaaaaaga atacccttca atctctttag
      181 cgacggttta taaaaatctt aatactttac aagaacaagg tttagttgtt gaaatcaatg
      241 ttttaaatca aaaaacttgt tacgatatct atgaagaaga acatattcat gttgtttgca
      301 ccaaatgtgg tggtatagag gatttaagtt ttaaagatgc taagctttat gaatatcaag
      361 agcatttaga aaaaaagata ggcaatctcg tcaatcatct gtctgtttgt gcttatgttg
      421 ataattgcaa aaagtgtcat taagcaaaat aaggttaaaa taacccatat attttaaggg
      481 ttattttaat ggtttatgaa attcaaaaaa actttttact atctgattgc actcttttag
      541 agaatttaaa aaaagataat ataccttttc gaaattctaa atttgaaact ttttatactc
      601 aaataacttc aaatcatagt gttaaatttc aaagtttttg caatgaattt tata
//
LOCUS       DAPIYB010000150          633 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.151, whole genome shotgun sequence.
ACCESSION   DAPIYB010000150 DAPIYB010000000
VERSION     DAPIYB010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 633)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 633)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.151"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..>633
                     /locus_tag="RJ318_001686"
     CDS             <1..>633
                     /locus_tag="RJ318_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDV7431516.1"
                     /translation="LSTIDLSEELKTYQVILFDVAAKDVEIHIAMVFDQQSILEYLSL
                     YEMFISSHYYLKYYEISILSLNELCIKSASVAIRNADITCFLPLLTHGQFLQNIPSML
                     ESIPFQRILNERKNKFENAIVVSAGPSLAKQLSLLKAYQDKAVIFCADGALSMLEKEG
                     IIPDYVTNLDCRDLAMKFFQNKENLKQSIIALECATHPNVVRSLKAENCM"
BASE COUNT          220 a           79 c          109 g          225 t
ORIGIN      
        1 tttaagtacg atagatttga gtgaagagct aaaaacttat caagtgatat tgtttgatgt
       61 agcagccaag gatgtggaaa ttcatattgc tatggttttt gatcaacaaa gcattttaga
      121 gtatttaagt ttatatgaaa tgtttattag ctcgcattat tatcttaaat actatgaaat
      181 ttctatttta tctttgaatg aactttgtat taaaagtgca agtgtagcaa taagaaatgc
      241 agatattact tgttttttac ctttgctaac acatggacag tttttacaaa acatcccctc
      301 tatgcttgaa agcattcctt ttcaaagaat cttaaacgaa agaaaaaaca aatttgaaaa
      361 tgctatagta gtttctgcag gacctagttt agctaaacaa ctttctttgc ttaaagctta
      421 tcaagataaa gcagtgatat tttgtgctga tggagcttta agtatgcttg aaaaagaagg
      481 tataatacct gattatgtta ctaatttaga ttgtagggat ttggcaatga aattttttca
      541 aaataaagaa aatttaaaac aaagcatcat tgctcttgag tgtgctacac atcctaatgt
      601 cgtgcgtagt ttaaaggctg aaaattgtat gat
//
LOCUS       DAPIYB010000151          599 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.152, whole genome shotgun sequence.
ACCESSION   DAPIYB010000151 DAPIYB010000000
VERSION     DAPIYB010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.152"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            90..>599
                     /locus_tag="RJ318_001687"
     CDS             90..>599
                     /locus_tag="RJ318_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDV7431517.1"
                     /translation="MNLWDKKAKTYARYQNTLNTIQKQTFEYLQNLKISFQDKSIIDI
                     GCGTGVWTLHLAKEAKEILALDSANAMLEILQEDAKKLNLNNIKCKNLSFETWMQNNP
                     NVKFDLAFLSMSPALQNEKDYTNFLNLAKIKIYLGWADYRKSDFLDPIFKYFNTEFKG
                     FYKKDLENYL"
BASE COUNT          240 a           65 c           82 g          212 t
ORIGIN      
        1 aggttttaat taatcattca agccctttct ttgggcttga attttaaaaa tttatgctat
       61 gattttatat attttataaa ggaaagtata tgaatttatg ggataaaaag gctaaaactt
      121 acgcaagata tcaaaacact ttaaacacta tacaaaaaca aacttttgaa tatttacaaa
      181 atttaaagat ttcctttcaa gataaaagta ttatagatat aggatgtgga actggggttt
      241 ggactttaca cttagctaaa gaagctaaag aaattttagc cctagatagt gcaaatgcta
      301 tgcttgaaat tttacaagaa gatgctaaaa aactaaatct taacaatata aaatgcaaaa
      361 atttgagctt tgaaacttgg atgcaaaaca atcctaatgt taaatttgat cttgcatttt
      421 taagtatgtc tcctgcttta caaaatgaaa aagattatac aaatttctta aatctagcca
      481 aaataaaaat ttatcttggt tgggctgatt atagaaaaag tgatttttta gatccgattt
      541 ttaaatattt taatactgaa tttaaaggtt tttataaaaa agatttagaa aattattta
//
LOCUS       DAPIYB010000152          559 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.153, whole genome shotgun sequence.
ACCESSION   DAPIYB010000152 DAPIYB010000000
VERSION     DAPIYB010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.153"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..>559
                     /locus_tag="RJ318_001688"
     CDS             <1..>559
                     /locus_tag="RJ318_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HDV7431518.1"
                     /translation="EFKLKNSNGHNMYSSALNYYRAFLIDYYEQDIFITERVQSEESN
                     MKIIPLNQILYGPPGTGKTYHTIDKALEILGENLESRDEKKAKFDEYVRKGQIVFTTF
                     HQSYGYEEFVEGIKPIIDNDENSQEVKYDVKDGIFKELCDKSLKNYILSMQNENEIDL
                     DKLIFEFANYINQDFLNKGNEFPLEN"
BASE COUNT          242 a           44 c           88 g          185 t
ORIGIN      
        1 agaatttaag ttaaaaaata gcaatggaca caatatgtat tctagtgcat tgaattatta
       61 tagagctttt ttgattgatt attatgaaca agatattttt ataactgaaa gagtgcaatc
      121 tgaggaatca aatatgaaaa ttataccatt aaatcaaatt ctttatggac ctccagggac
      181 aggaaaaact tatcatacta tagataaagc tttagaaatt ttaggtgaaa atttagaaag
      241 tagagatgag aaaaaagcaa aatttgatga gtatgtaaga aagggacaaa tagtatttac
      301 cacttttcat caaagctatg gatatgaaga atttgtagaa ggtataaagc ctataataga
      361 caatgatgaa aattctcaag aagtaaaata tgatgtaaaa gatggaattt ttaaagaatt
      421 atgtgataaa tctttgaaaa attatatttt atcaatgcaa aatgaaaatg aaattgattt
      481 agataaatta atttttgaat ttgctaatta tattaatcaa gattttttaa ataaaggaaa
      541 tgaatttcct ttagaaaat
//
LOCUS       DAPIYB010000153          550 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.154, whole genome shotgun sequence.
ACCESSION   DAPIYB010000153 DAPIYB010000000
VERSION     DAPIYB010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.154"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            108..184
                     /locus_tag="RJ318_001689"
     tRNA            108..184
                     /locus_tag="RJ318_001689"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:142..144,aa:Asp,seq:gtc)
     gene            252..>550
                     /locus_tag="RJ318_001690"
     CDS             252..>550
                     /locus_tag="RJ318_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDV7431519.1"
                     /translation="MLIIGHKLLKNLDFSFIESVEEVKDNKVYCIVYDEKLISYLSQN
                     DFEFAILVQNKDEIFLANALGAKFLLCNDKKLAKFASKVAEFYVFDSRVLMIVDK"
BASE COUNT          180 a           66 c          103 g          201 t
ORIGIN      
        1 agagcgccac ccttacaagg tggatgtcat aagttcgagt cttatagtga ccaccatttt
       61 ataaaatcat aaataggttt tataatctct acttctttac tttggatgca gcggtagttc
      121 agctggttag aatgccgccc tgtcacggcg gaggtcgcgg gttcgagccc cgtccgctgc
      181 gccatcttgc ttggtaacaa ttttataagt ataatttaca aaataataaa aaatagagct
      241 aaggaaaaaa aatgcttatt attggacata aattattaaa aaatttagat ttttctttta
      301 ttgaaagtgt tgaagaagtt aaagataata aagtttattg tattgtttat gatgaaaaat
      361 tgatttctta tttaagtcaa aatgattttg aatttgctat tttagttcaa aataaagatg
      421 agatattttt agccaatgct ttaggagcta agtttttgct ttgtaatgat aaaaaacttg
      481 caaaatttgc tagtaaggtt gcagaatttt atgtttttga tagtagggtt ttaatgattg
      541 ttgataaatt
//
LOCUS       DAPIYB010000154          496 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.155, whole genome shotgun sequence.
ACCESSION   DAPIYB010000154 DAPIYB010000000
VERSION     DAPIYB010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.155"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            complement(<1..326)
                     /locus_tag="RJ318_001691"
     CDS             complement(<1..326)
                     /locus_tag="RJ318_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDV7431520.1"
                     /translation="MKTVGVVIPIYNVEKYLRECLDSVVNQTYKNLQVVLVNDGSTDE
                     NSLNIAKEYTLKDERFILFDKENGGQSTARNVGIEFFSKEYDFKNITQELKENSLVEF
                     KLDNED"
     gene            complement(336..>496)
                     /locus_tag="RJ318_001692"
     CDS             complement(336..>496)
                     /locus_tag="RJ318_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
                     /protein_id="HDV7431521.1"
                     /translation="LVKEKKFLNIKVENDFNVFGAKVDLIIANRFDDKLKEIKDKVFS
                     ADVFYTDI"
BASE COUNT          164 a           87 c           42 g          203 t
ORIGIN      
        1 ttatcttcat tgtctagttt aaattctact aaagagtttt cttttaattc ttgggtaatg
       61 tttttaaaat catattcttt actaaagaat tctatgccaa catttcttgc tgtactttgt
      121 cccccatttt ccttatcaaa aagtataaat ctttcatctt ttaaagtata ttctttggct
      181 atattaagcg agttttcatc tgtactacca tcatttacaa gtacaacttg taaattttta
      241 taagtttgat tgacaacact atctaaacat tctcttaaat atttttctac attatagatt
      301 gggataacta cacctacagt tttcacagta atttcctaaa tatcagtata aaatacatct
      361 gctgaaaaaa ctttatcttt aatctcttta agcttatcat caaaacgatt ggctatgatc
      421 aaatcaactt tagctccaaa aacattaaaa tcattctcta ctttaatatt taaaaatttt
      481 ttctccttaa ccaaag
//
LOCUS       DAPIYB010000155          464 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.denovo.156, whole genome shotgun sequence.
ACCESSION   DAPIYB010000155 DAPIYB010000000
VERSION     DAPIYB010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.denovo.156"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            <1..>464
                     /locus_tag="RJ318_001693"
     CDS             <1..>464
                     /locus_tag="RJ318_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HDV7431522.1"
                     /translation="IFYTFTQAKNLEQEQNTSSNLVSVSIAPQAFFVKKIAANTLDVN
                     VILPPNSNEHNFEFKPSTMKKLEKSDIYFTIGLEFEKVFTDKFKQNFPKLQVVNMQKN
                     IALIQTHDTHGHSHEHEHHEHEHFDPHTWLDPILVQTMALNIYDTLIQKYPQ"
BASE COUNT          184 a           78 c           57 g          145 t
ORIGIN      
        1 atattttata ctttcacaca agctaaaaat ttagagcaag aacaaaatac tagtagcaat
       61 ttagttagtg tcagtatagc acctcaagca ttttttgtta aaaaaatagc tgcaaatact
      121 ctagatgtca atgttatttt gcccccaaat agcaatgagc ataattttga atttaaacca
      181 agtactatga aaaaacttga aaaaagtgat atttatttca ctataggctt agaatttgaa
      241 aaagttttta cggataaatt taaacaaaat tttccaaaac ttcaagttgt aaatatgcaa
      301 aaaaacatag ctttgattca aactcatgat acacacggac actctcatga gcatgaacac
      361 cacgaacatg agcattttga tcctcatact tggctagatc ctattttagt ccaaactatg
      421 gctttaaata tttatgacac cttaattcaa aaatatccac aaaa
//
LOCUS       DAPIYB010000156        14217 bp    DNA     linear   BCT 14-SEP-2023
DEFINITION  TPA_asm: Campylobacter jejuni isolate 06_5790
            SAMN06270834-rid18266073.guided.042, whole genome shotgun sequence.
ACCESSION   DAPIYB010000156 DAPIYB010000000
VERSION     DAPIYB010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN06270834
            Sequence Read Archive: SRR5209531
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 04-JUN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001768218.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001768218.1
            Genome Coverage       :: 157x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 06/04/2023 23:10:58
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 1,713
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 38 of 49
            Pseudo Genes (incomplete)         :: 9 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14217
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN06270834-rid18266073.guided.042"
                     /isolate="06_5790"
                     /isolation_source="Human stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:197"
                     /country="Canada: Waterloo, Ontario"
                     /lat_lon="43.4642 N 80.5204 W"
                     /collection_date="2006-09-13"
                     /collected_by="FoodNet Canada"
     gene            99..875
                     /gene="surE"
                     /locus_tag="RJ318_001694"
     CDS             99..875
                     /gene="surE"
                     /locus_tag="RJ318_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDV7431523.1"
                     /translation="MKEILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSAC
                     SHSITLTKPLRFVKVGKRFYKLDDGTPADCVYLALHALYKKRLPDLVISGINKGANVG
                     EDITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDYKNALQITKKIIQNIFDKGFP
                     LEKKEFLNINFPAKSKIKGIKICKAGKRVYNFEAHSNVNPRGVEYYWLAAANLDFEDE
                     KNSDIALLKKGYATITPIMLDLTAYERMKKVKKWLKANDE"
     gene            865..1524
                     /locus_tag="RJ318_001695"
     CDS             865..1524
                     /locus_tag="RJ318_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDV7431524.1"
                     /translation="MMNDRFTRIKWLVGEEKFQKISQTKVLVCGLGGVGGICVDALYR
                     SGFKNLTLIDADKFEITNQNRQIHSENIGEEKAKVFERIYKVKGIVSKIDENFLKNFD
                     LSEFDLIIDAIDDIPAKVALAHLIDFKKQIFISSTGGARKLDPTRIKTTSIFKTHGDA
                     LAKKFRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLALRKVLAKK
                     S"
     gene            1508..1936
                     /locus_tag="RJ318_001696"
     CDS             1508..1936
                     /locus_tag="RJ318_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDV7431525.1"
                     /translation="MLRKADIKDLNACLSLFEQSVKTLCAWIKIDRQQWEEKFKYDEI
                     FVYEKRGKIASFISVKQEQKLLDLLFTHPDFVRQGLAQNLLDFILKTYLHNEIYTFAS
                     LSAKDFFLKNGFELIRENKVIKEGQNLKKILMKKDVIYKN"
     gene            complement(2046..2426)
                     /locus_tag="RJ318_001697"
     CDS             complement(2046..2426)
                     /locus_tag="RJ318_001697"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDV7431526.1"
                     /translation="MNITLLKSKIHRASVTEARLDYIGSISIDEKLLQASGILEYEKV
                     QVVNVNNGARFETYTIATQEEGVVCLNGAAARLAEVGDKVIIMSYADFNEEEAKTFKP
                     KVVFVDENNTATKITNYEKHGAIF"
     gene            complement(2423..3271)
                     /locus_tag="RJ318_001698"
     CDS             complement(2423..3271)
                     /locus_tag="RJ318_001698"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDV7431527.1"
                     /translation="MQVITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA
                     KTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMYLKNF
                     STYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMV
                     DDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLAISQSIFLAEKLVREGEKN
                     TSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNF
                     LVQGLK"
     gene            complement(3282..4106)
                     /gene="panB"
                     /locus_tag="RJ318_001699"
     CDS             complement(3282..4106)
                     /gene="panB"
                     /locus_tag="RJ318_001699"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDV7431528.1"
                     /translation="MRKSMISFLEKKAKNEKITMVSAYDYHSARILDNSDIDIILVGD
                     SLAMTVLGMQDTLSVTMDEMLIFTKAVSRGAKKSFVLADMPFMSYQSSDRDAILNASR
                     FIKESHANGVKVEGGIEIASKIKLISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQS
                     AQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHD
                     LLGLNKDFKAKFVKHFDKIDPQVGVEKYRDEVKSGIFPSQEHSFDYLDDELLDKLY"
     gene            4326..5099
                     /locus_tag="RJ318_001700"
     CDS             4326..5099
                     /locus_tag="RJ318_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002872036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-61 family class D beta-lactamase OXA-193"
                     /protein_id="HDV7431529.1"
                     /translation="MKKITLFLLFLNLVFGQDKILNNWFKEYNTSGTFVFYDGKTWAS
                     NDFSRAMETFSPASTFKIFNALIALDSGVIKTKKEIFYHYRGEKVFLSSWAQDMNLSS
                     AIKYSNVLAFKEVARRIGIKTMQEYLNKLHYGNAKISKIDTFWLDNSLKISAKEQAIL
                     LFRLSQNSLPFSQEAMNSVKEMIYLKNMENLELFGKTGFNDEQKIAWIVGFVYLKDEN
                     KYKAFALNLDIDKFEDLYKREKILEKYLDELVKKVKNDG"
     gene            complement(5184..6068)
                     /locus_tag="RJ318_001701"
     CDS             complement(5184..6068)
                     /locus_tag="RJ318_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HDV7431530.1"
                     /translation="MIRIDINHPMNTAKGRLDLNFKKDIESGKITALFGESGAGKTTL
                     LKIIAGLIKPKLGRIEVDNELWFDSSKNFSLALQKRKIGFVFQDYALFPNMNIKENIA
                     YAASSKAKVSELLALMKLENLAKIYPKHLSGGQAQRVALARALAREPKILLLDEPLSA
                     LDFKMRANLQDELTKILEYFKISTLLVSHDLAEIYKLSHRILELKNGKIIKDFPKNEF
                     FTHSNISAKLRLSATLLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKAYQDVKIGDT
                     LLLSIKAFNPIIVGKLDK"
     gene            complement(6065..6739)
                     /gene="modB"
                     /locus_tag="RJ318_001702"
     CDS             complement(6065..6739)
                     /gene="modB"
                     /locus_tag="RJ318_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDV7431531.1"
                     /translation="MLDPAFLQTLYLTFKLAFITTFILFFIGVFLAYLLSFVRFPFKT
                     ILQSFISLPLILPPSVLGFYLLVTFSANSFLGQVLKEYFNLSLVFSFEGLVFASLIFS
                     LPFMVNPLQSAFSSINPNLLDASYSLGKSKIYTLFRVILPNSKAGIFSACAMSFAHTV
                     GEFGVVMMIGGHKQGETLVASIAIYDELEILNYSLAHQYAFILFIFSFLVLFSLYFIN
                     KKMSFQ"
     gene            complement(6732..7133)
                     /locus_tag="RJ318_001703"
     CDS             complement(6732..7133)
                     /locus_tag="RJ318_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-pterin-binding protein"
                     /protein_id="HDV7431532.1"
                     /translation="MNLIKGQICELLNQEDIVIVKILSKEVIFSVLMLELKSLENLKI
                     GVSVELLFKEHELCFSASKTLLSVENSFLAKITKIKKGKLLYQVFFDFKGNELSSIIT
                     KEKALELEICENQEWLCFVKANDIVLRSHSA"
     gene            complement(7130..7879)
                     /gene="modA"
                     /locus_tag="RJ318_001704"
     CDS             complement(7130..7879)
                     /gene="modA"
                     /locus_tag="RJ318_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDV7431533.1"
                     /translation="MKKFVVFFGILLFVSCLNAQNLSIFVASSASKAMSEVKDEFLKT
                     HPEDKIELVFGASGKYYELLKQGREFDLFFSADTKYAKAIYDDKNALIKPKVYVLGVL
                     ALYSLDENLLQGGVENLKEKANKITHLSIANPKVAPYGVAAKEVLENLGLNELLKDKI
                     VLGENISVPVLHVDSKNSDIAIVAYSLVSSINHPKGKAVIIDAKYFSPLEQSYVITKY
                     AKDKKLAFEFNEFIGSSKAKEIFKKYGFSTP"
     gene            complement(7930..8616)
                     /gene="bioC"
                     /locus_tag="RJ318_001705"
     CDS             complement(7930..8616)
                     /gene="bioC"
                     /locus_tag="RJ318_001705"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDV7431534.1"
                     /translation="MNFLKAKDYEKHAKVQDFMGLKLCEILKNLRISHFEKVFEFGCG
                     RGELSKKLQNFITFDEYLKNDILDFKENSSILIFDMNEIAKQDLSKEKFDLIVSNATL
                     QWLDLKRIIPSLRDMLNQNGILLLSTFAEQNLKEIKQSTGFGLNYFSLNELEQIFKVY
                     FNEVKITQELIKLSFDNALDVFRHLKLSGVNSLGFYPLNKGFLKEFEEKFQNKLTYHP
                     VFILCKNDIK"
     gene            complement(8613..9224)
                     /locus_tag="RJ318_001706"
     CDS             complement(8613..9224)
                     /locus_tag="RJ318_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDV7431535.1"
                     /translation="MKYEFLCKNPDSKKLIVVFGGFASHSSHFSHLKSDKNVILFYDY
                     ENFDLNFDFKAFDELFLIAFSMGVCVANRLLKELNFKQKIAINGTNLGIDKSKGIHPA
                     IFRKTLQNFKLENFKEALFKERKNLTKDFIFKDEKALKIELEKLFDFALVKQEENLLW
                     DKVYSSKKDEIFPPNALKNAFSKLIFLNEPHFAFFHFKTWDEL"
     gene            complement(9221..10363)
                     /locus_tag="RJ318_001707"
     CDS             complement(9221..10363)
                     /locus_tag="RJ318_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase
                     family protein"
                     /protein_id="HDV7431536.1"
                     /translation="MKLEKILQDLEQNHNLRTLTPLKHENKFVYKQDHKLLNLVGNDY
                     LYLASSKELKAEFLNTLKEQDLFFSSSSSRSLSGNFEIYEKLESFLKTKFKDKEILHF
                     NSGYHLNISCIAALSSVSKTLFLTDKFIHASMIDGLRLGRADFFRFHHKDMNHLESLI
                     QKHYENYENIIVLSEALFSMDGDFSDFKTLCELKRRYDKIKLYIDEAHSVGCFDEEGL
                     GLVKKLALENEVDFLVFTFGKALASMGACIICDEKYKKFFINKARAFIYSTALPPINV
                     AWTQFIFKKMPYFKKEREKLELLSTFFKSKLQEKNHIVLGDAYIICLLLGENKKALEI
                     SQKLQKAGFFAPAIKEPTVPKNTARIRFSLHAGLNTEELERIIELL"
     gene            10431..11714
                     /locus_tag="RJ318_001708"
     CDS             10431..11714
                     /locus_tag="RJ318_001708"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDV7431537.1"
                     /translation="MQNQILKNLDLKHIWHPCTQMKDHETLPLIPIKKAKGVWLYDFD
                     DKAYMDCVSSWWVNLFGHCNEKIANAIKKQVDELEHVILAGFTHEPIIKLSARLCEKV
                     GRNFNKCFYADNGSSAIEVALKMSFHYHLNKGVKKSKFLSLSNSYHGETLGALSVGDV
                     ALYKDTYKALLLECLSTPVPQGKDYTKELEILKDILEKNASEICAFILEPLVQCAGNM
                     HMYEARFIDEAIKLCHKFGVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITG
                     GFMPLSVVLTRDEIYNAFYDTYESQKAFLHSHSYTGNTLACAAANAVLDIFEDENILV
                     KNQILSEFIKKEFSRLEKFDFLGNFRTCGMISAFDILSTKYKRVGLFVFQKALEKGLL
                     LRPLANTIYFMPPYIITKEQIVYVLESLEQIFKEF"
     gene            complement(11701..12306)
                     /locus_tag="RJ318_001709"
     CDS             complement(11701..12306)
                     /locus_tag="RJ318_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDV7431538.1"
                     /translation="MQIYVSGIHTDVGKTHFSAAFCANFNYDYFKLIQAGTPTDSEFI
                     AKFSPKTKIFKEGIFLQTPASPHLGKIKEKLDYKALDIILPKSKNLLIELAGGLFSPM
                     DENYTMIDFVNIFKHPTILVAKYYLGSINHILLSIEALKQRNINLLALVMMGKKDILQ
                     DDFIKNYAKIPIINLDFFDENSILNKDFKEQMQEILQLKIP"
     gene            complement(12316..12630)
                     /locus_tag="RJ318_001710"
     CDS             complement(12316..12630)
                     /locus_tag="RJ318_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7431539.1"
                     /translation="MEWFYLFLATACEIFGVVIMKELVSTKNKLYLLALIVCFGFSFT
                     FLSLSMQNIAMSVAYAIWTGAGTAGGVMIGVLFYKESKSFLKLFLIAVIITCTAGLKF
                     LS"
     gene            complement(12634..12972)
                     /locus_tag="RJ318_001711"
     CDS             complement(12634..12972)
                     /locus_tag="RJ318_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HDV7431540.1"
                     /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWQYILTAIGV
                     CISFTCFLKACERLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSIIKLVLIAILLLSI
                     IALKWVSKEA"
     gene            13106..13642
                     /locus_tag="RJ318_001712"
     CDS             13106..13642
                     /locus_tag="RJ318_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDV7431541.1"
                     /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNE
                     FIKEVRKKTTLIFDVKVGSQTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPV
                     KITGTAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAG
                     VTMIDADRVAVVGVEKAR"
     gene            13639..14184
                     /locus_tag="RJ318_001713"
     CDS             13639..14184
                     /locus_tag="RJ318_001713"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDV7431542.1"
                     /translation="MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFK
                     GELFKIGSSLLLLKPSTYMNNSGLSVKAVNDFYKCERMIVIHDDIDINLGALRFKKGG
                     SSGGHNGLKSIDTLCGNDYERVRIGVGKGENVISHVLGKFKSEEEITLSKVLEHAKKA
                     LLELIENDDLSAISSKYSLKA"
BASE COUNT         5092 a         2170 c         2088 g         4867 t
ORIGIN      
        1 aatacgaaat ttatataatt taaaaattaa aattttatac tatgaagctt taaaaaaata
       61 tgttaaaatc cagattttta tcttttgcaa ggaagacaat gaaagaaatt cttatcacta
      121 atgacgatgg ttatgaaagc gaaggactta aaaaactcat taagatgtta acaaaagaat
      181 ttaaagccaa gatcaccata gtagctcctg ctagtgaaaa atcagcttgt tcgcactcta
      241 taaccctaac caaacctttg cgttttgtta aagtgggaaa aagattttac aaacttgatg
      301 atggcactcc agcagattgt gtttatcttg ctttgcatgc tttatacaaa aagcgtttgc
      361 ctgatcttgt aataagtggg attaataaag gtgctaatgt aggcgaggat attacctact
      421 caggaacttg cgcaggagct atggaggcgg ttttacaagg aattcctgct atcgctcttt
      481 ctcaatttta taaaaaaagc gaaaaagaac tagactataa aaatgcttta caaattacca
      541 aaaaaatcat tcaaaatatt tttgataaag gttttccttt ggaaaaaaaa gaatttttaa
      601 atatcaattt tcctgcaaaa tcaaaaatca aaggcattaa aatttgtaaa gcaggcaaaa
      661 gggtttataa ttttgaagcc cattcaaatg tcaatccgag aggagtagag tactattggc
      721 ttgcagcggc gaatttagac tttgaagatg agaaaaatag cgatattgcc ttacttaaaa
      781 aaggctacgc tacaataaca cctataatgc tggatcttac agcttatgaa agaatgaaaa
      841 aagttaaaaa atggttaaag gcaaatgatg aatgatagat ttacacgtat aaaatggcta
      901 gttggagaag aaaaatttca aaaaatttca caaacaaaag ttttggtttg cggacttggt
      961 ggagtgggtg gaatttgcgt tgatgcgctt tatcgtagtg gttttaaaaa ccttacttta
     1021 atcgatgcgg ataaatttga aatcactaat caaaatcgcc aaattcatag cgaaaatata
     1081 ggcgaagaaa aggctaaagt atttgaaaga atttataagg ttaaaggtat agtcagtaaa
     1141 atcgatgaaa attttttaaa aaattttgat ttaagcgagt ttgatcttat catagatgcc
     1201 attgatgata ttcctgcaaa agtagctttg gctcatctta tagattttaa aaaacaaatt
     1261 tttatctcct caacaggtgg agctagaaag cttgatccaa cacgcattaa aactacaagt
     1321 atttttaaaa ctcacggcga tgctttagcg aaaaaatttc gttatgagct tagaaaatca
     1381 ggctttaagg gaaattttga tgtggtattt tcagatgagg aagcgcattg taaagatctt
     1441 ggatctttta tgggtgtgac tgcatctttt ggtttagccc tagccagctt ggcattaaga
     1501 aaagttcttg ctaagaaaag ctgatattaa agatttaaat gcttgtttgt cgctttttga
     1561 gcaaagcgta aaaacacttt gtgcttggat taaaattgat agacaacaat gggaagaaaa
     1621 atttaaatat gatgagatct ttgtctatga aaaaagagga aaaatcgcaa gttttataag
     1681 tgttaaacaa gagcagaaat tgcttgattt gctttttact catcctgatt ttgttagaca
     1741 aggtttagca caaaatttac ttgattttat tttaaaaact tatttgcata atgaaattta
     1801 cactttcgca tccttaagtg ctaaagattt tttcttaaaa aatggttttg aacttataag
     1861 ggaaaacaag gttatcaaag agggacaaaa tttaaaaaaa attttaatga aaaaagatgt
     1921 gatttataaa aactagaagt taagataagc aaaaataatg gattaaaaga tataaaaatc
     1981 atttttttct atcttagata aatgaattta tctaagatag aaaaaattac aaaaatagct
     2041 agatgttaga aaatagctcc gtgtttttca taatttgtta tttttgtagc agtgttattt
     2101 tcatccacaa aaacaacttt tggtttaaat gtttttgctt cttcttcatt aaaatcagca
     2161 taagacatga tgatcacctt atctcccact tctgcaagac gagccgcagc accatttaag
     2221 catacaactc cttcttcttg cgtggctatg gtataggttt caaatctagc gccattattg
     2281 acattgacta cttggacttt ttcgtattct aaaattccac tcgcttgcaa taatttttca
     2341 tctatactta tacttcctat ataatcaagc ctagcttctg ttacgcttgc gcgatgtatt
     2401 tttgatttga gtaaagtgat attcatttta atccttgtac taaaaaatta tcaatgagtc
     2461 ttgtttttcc aacaaaagca gccaccgctc ctaaaacatt atcagtgata ttttcgatat
     2521 tttccatggt gttaaaatcg actaattcta tataatcgat tttgattagt ttttcttttt
     2581 ctaaaatatc tttcatagct tggatgatct tagaagtatt tttttctccc tctcggacta
     2641 atttttcagc caaaaaaatg ctttgagata tagctagtga cgcttttctt tcttctttgc
     2701 taagatatac atttctagag cttttagcta agccatcttc ttctctaatg ataggacaaa
     2761 tttgaatttt taaatcaaaa tttaaatcat caaccatatg cctaacgact acgcattgct
     2821 gcgcgtcttt ttgccccata tagactatat cagggtttag gatattaaaa aatttagtta
     2881 aaaccgtgca aacgcctcta aaatgccccg gtcttttagc cccgcaaagt ttatcagtga
     2941 tcgtattcat atctacatag gtgctaaaat tcttaagata catttgagtt gcatcgggga
     3001 taaaaaccat atcaacgcca ttatcttgac acattttaat gtcgcgttct aaatctcttg
     3061 gataactaga aaaatcttca ttaggcccaa attgcatagg atttacaaag atacttacta
     3121 taaccttatc ttgtgttttg gcatgtttga ctaaacttaa atgtccatcg tgtaaaaaac
     3181 ccatggttgg aacatagcct atactaagtt gatgtgattt ccaatctttt acaatttgtt
     3241 ttgcttcttt gacagaagta atgacttgca tatttgtatc cttagtataa tttatctaat
     3301 aattcatcat ctaaataatc aaagctgtgc tcttgggaag gaaaaatacc gcttttaact
     3361 tcatctctat atttttcaac tcctacttga ggatcaattt tatcaaaatg ctttacaaat
     3421 tttgctttaa aatctttatt taaacccaaa agatcgtgat aaactaaaac ttgtccatcg
     3481 cagtatttgc ctgaacctat gccgattgtt ggaatttcta aaatagagct tattttttgt
     3541 gctagtttta caggcacaca ttctaaaacc aacatacaag cacccgcatc ttgcacagct
     3601 tttgcatcat ctataatttt ttgggctgat tgtaaatctt taccttgaac cctatagcca
     3661 cctagcatat ttacagcttg tggggttagt cctaggtgag caacgacggg tattcctgat
     3721 tgggaaatca atttaatctt acttgcgatt tctatacccc cttccacttt taccccattt
     3781 gcgtggcttt ctttgataaa tcttgaggca tttaagatag cgtcacgatc tgaactttga
     3841 taagacataa aaggcatatc agcaagtacg aaagactttt tagctccgcg agaaacagct
     3901 ttggtaaaaa tcaacatttc atccatagta acacttaaag tatcttgcat accaagtacc
     3961 gtcatggcta atgaatctcc aaccaatata atatctatat cgctattgtc taaaattctt
     4021 gcactatgat aatcatacgc acttaccatg gttatttttt catttttggc ctttttttcc
     4081 aaaaaactaa tcatactttt tctcattttg catacctcaa tttttagcta taaaataata
     4141 agcaaaaaac tagcatataa tttttcataa atagtaaatg aatgataaag taagttatat
     4201 ttaatcgatg gattgcttta atggttacaa ttttagaaaa tttcagttca tgttaaagga
     4261 tatttaaaga aaataaagct ttaaaaagta ttttgtttaa aattatttaa atagaaagat
     4321 attttatgaa aaaaataact ttatttttac ttttcttaaa tttagtgttt gggcaagata
     4381 agatattaaa taattggttt aaagagtata atacaagcgg cacttttgtt ttttatgatg
     4441 gaaaaacttg ggcgagtaac gacttttcaa gggctatgga gactttctct cccgcttcca
     4501 cttttaaaat ttttaatgct ctaattgcac ttgatagtgg tgtgataaaa actaaaaaag
     4561 aaatttttta tcactataga ggtgaaaaag tatttttatc ttcttgggcg caagatatga
     4621 atttaagttc agctataaaa tattctaatg ttcttgcttt taaagaagtg gcaagaagaa
     4681 ttggtatcaa aactatgcaa gaatatttaa acaagcttca ttatggtaat gctaaaattt
     4741 ccaagatcga tactttttgg cttgacaact cactaaaaat aagcgctaaa gaacaagcaa
     4801 ttttgctttt tagactttca caaaatagct tacctttttc tcaagaagca atgaatagtg
     4861 ttaaggaaat gatttattta aaaaatatgg aaaatttaga gctttttgga aaaacaggtt
     4921 ttaatgatga gcaaaaaatt gcttggattg taggttttgt gtatttaaaa gatgaaaata
     4981 aatataaggc tttcgcgcta aatttagata ttgataaatt tgaagattta tataaaagag
     5041 aaaaaatttt agaaaaatat ttagatgaac ttgtaaaaaa agttaaaaat gatggctagt
     5101 gagtatttcg taaaatgcaa aaatacttaa ttgtatgatt tgcgtacact taaagtactc
     5161 attaaaaaat taaatttttg ctcttattta tcaagttttc ctacgatgat agggttaaag
     5221 gcttttatgg atagcaaaag cgtatcgccg atttttacat cttgataagc ttttagaaat
     5281 tcctcttcac taagagtgat tttaataata tcttgattta aaagcaaggt taaaaccact
     5341 aaaatatcac tttttttaat ttctagcaaa gttgcactta agcgtaattt tgcgctgata
     5401 tttgaatgag taaaaaattc atttttagga aaatctttaa taatttttcc gtttttaagc
     5461 tctaaaattc tatgacttaa cttataaatt tcagctagat catgacttac caataaagta
     5521 cttattttaa aatactctaa aatcttggtt aattcatctt gtaaattggc acgcatttta
     5581 aaatccaaag cactcaaagg ttcatctaaa agcaagattt ttggttctct tgctaaagct
     5641 cttgctaaag ctactctttg tgcctgcccc ccacttaaat gtttaggata aattttagct
     5701 aaattttcaa gcttcattaa ggctaaaagc tcgctaacct ttgctttaga actagcggca
     5761 taggcgatgt tttcttttat attcatattt ggaaaaagcg cataatcttg aaaaacaaaa
     5821 ccaatttttc ttttttgtaa agctaaacta aaattttttg aagaatcaaa ccaaagttca
     5881 ttatctactt ctatacgccc caatttaggc tttataagtc ccgctatgat ttttaaaaga
     5941 gtggtttttc ctgctccact ttcgccaaaa agtgcagtaa tttttcctga ttctatatct
     6001 tttttaaaat ttaaatccag tcttccttta gcggtattca taggatgatt gatatcaatt
     6061 cttatcattg aaaactcatt tttttattga taaaataaag actaaaaagt actaaaaaag
     6121 aaaaaataaa caatataaaa gcatattgat gggctaagct atagtttaag atttcaagtt
     6181 catcataaat agctatacta gccactaaag tttcaccttg tttatgtcct cctatcatca
     6241 tcacgactcc aaattcaccc acagtatggg caaaactcat cgcacaagca ctaaaaattc
     6301 ctgctttaga attaggtaaa atcactctaa aaagagtata aattttactt ttacctaaac
     6361 tataagaagc atcgagcaaa tttggattga tcgatgaaaa ggcactttgc aaaggattta
     6421 ccataaaagg caaagaaaaa atcaaagaag caaaaacaag accttcaaaa ctaaaaacca
     6481 aagaaagatt aaaatattct tttaaaactt gccctaaaaa actattagcc gaaaaagtta
     6541 caagcaaata aaatcccaaa acactaggag gtaaaatcaa aggcaaggaa ataaagcttt
     6601 gaaggattgt tttaaaagga aaacgcacaa aacttaacaa ataagctaaa aaaacaccga
     6661 taaaaaaaag gataaaagtc gtgataaaag caagtttaaa agtaagataa agggtttgta
     6721 aaaaagctgg atcaagcact atgactcctt aatacaatat catttgcttt tacaaaacaa
     6781 agccattctt gattttcaca aatttcaagt tctaaagctt tttctttggt gataatacta
     6841 gaaagttcat tacctttaaa atcaaaaaat acctgatata aaagtttgcc ttttttaatt
     6901 tttgtaattt tagctaaaaa agaattttca acacttaaaa gagttttgct tgcgctaaaa
     6961 caaagctcat gctctttaaa aagaagttct acactcacac caatttttaa attttctaaa
     7021 gattttaatt caagcattaa aacactaaaa atcacttctt tagaaagtat tttaacaata
     7081 actatatcct cttgatttaa aagctcacaa atttgtcctt ttataaggtt catggtgtgc
     7141 taaatccgta ttttttaaaa atttcttttg cttttgaaga gccaataaat tcgttaaatt
     7201 caaaggctaa ttttttatcc ttagcgtatt ttgtgatgac ataactttgc tctaaagggc
     7261 taaaatactt tgcatcaatt ataacagcct tacccttagg atgattgata gaagaaacta
     7321 aagaataagc cactatagct atatctgaat ttttgctatc tacatgtaaa acaggcactg
     7381 agatattttc gcctaaaacg attttatcct taagaagctc atttaaaccc aaattttcaa
     7441 gcacttcttt agctgctact ccataaggag ctactttagg attggctatg cttagatgcg
     7501 tgattttgtt tgccttttct tttaaatttt caacgcctcc ttggagtaaa ttttcatcca
     7561 agctatacaa agccaaaact cccaaaacat aaacttttgg ttttattaaa gcatttttat
     7621 catcataaat agccttagca tatttagtat ccgctgaaaa aaagagatca aattctcttc
     7681 cttgttttaa aagctcataa tattttccag aagcaccaaa aaccaattct attttatctt
     7741 ctggatgtgt tttcaaaaac tcatctttaa cttcactcat cgcctttgaa gctgaagaag
     7801 ctacaaaaat acttaaattt tgcgcattta aacacgaaac aaaaagcaaa atcccaaaaa
     7861 atactacaaa ctttttcatt tagttttcct tgtgtaaaaa tttaattttt ggattataac
     7921 acaaaaaatt cattttatat catttttgca taaaataaat acaggatgat aagtgagttt
     7981 gttttgaaat ttttcttcaa attcttttaa aaaaccttta tttaaaggat aaaatcctaa
     8041 agaatttact ccgcttaatt ttaaatgtct aaaaacatct aaagcattat caaagcttaa
     8101 ttttatgagt tcttgagtaa tttttacttc attaaaatag actttaaaaa tttgctctaa
     8161 ttcatttaag ctaaaataat ttaaaccaaa acccgtgctt tgcttgattt cttttaaatt
     8221 ttgctctgca aaagtagaaa gaagtaaaat cccattttga tttagcatat ctctaagact
     8281 tggtataatg cgttttaaat caagccattg caaagttgca tttgaaacaa taagatcaaa
     8341 tttctcttta cttaaatcct gttttgcaat ttcgttcata tcaaaaatta aaatactaga
     8401 attttcttta aaatctaaaa tatcgttttt taaatactca tcaaaagtaa taaaattttg
     8461 aagttttttg ctcaattcac ccctgccaca accaaattca aatacttttt caaaatgtga
     8521 aattcttaaa ttttttaaaa tttcacaaag ttttaaaccc ataaaatctt gcacttttgc
     8581 atgtttttca taatcttttg cttttaaaaa attcaaagct catcccaagt tttaaaatga
     8641 aaaaaagcaa aatgcggttc atttaaaaaa ataagttttg aaaaagcatt ttttaaagca
     8701 tttggtggaa aaatttcatc ttttttactt gaataaacct tatcccaaag caaattttct
     8761 tcttgtttta ctaaagcaaa gtcaaaaagt ttttcaagct ctatttttaa agctttttca
     8821 tctttaaaaa taaaatcttt agttaaattt ttgcgttctt taaataaagc ttctttgaaa
     8881 ttttctaatt tgaaattttg caaggttttt ctaaaaattg caggatgaat tccttttgat
     8941 ttatctatgc ctaaatttgt gccatttatg gctatttttt gtttaaaatt aagctctttt
     9001 aaaagtctat ttgccacaca aacccccata gaaaaagcga ttaaaaaaag ttcatcaaaa
     9061 gctttgaaat caaaatttaa atcaaaattt tcataatcat aaaataaaat cacattttta
     9121 tcgcttttta aatgcgaaaa atgactagaa tgtgaagcaa atcccccaaa taccactata
     9181 agtttttttg aatcaggatt tttacataaa aattcatatt tcataaaagc tctattatcc
     9241 tttcaagttc ttctgtgtta agtcctgcgt gcaaagaaaa acgaattctg gctgtatttt
     9301 ttggcacggt aggttctttg atcgcaggag caaaaaaacc agctttttga agtttttgtg
     9361 aaatttctaa ggctttttta ttttcaccta aaagcaagca aataatataa gcatcgccta
     9421 aaacgatgtg atttttttct tgcaatttac ttttaaaaaa agtgcttaaa agctctaatt
     9481 tttctctttc tttcttaaaa taaggcattt ttttaaaaat aaattgcgtc caagctacat
     9541 taataggtgg caaggctgta gaataaataa aagctctagc cttgttgatg aaaaatttct
     9601 tatatttttc atcacatatt atacaagcac ccatggaagc aagggctttt ccaaaggtaa
     9661 aaaccaaaaa atccacttca ttttctaagg ctagtttttt aacaagcccc aaaccctctt
     9721 catcaaaaca acccacgctg tgtgcttcat ctatataaag cttaatttta tcataacgcc
     9781 ttttaagctc acacagagtt ttaaaatcgc taaaatctcc atccatacta aacaaagctt
     9841 cgcttaaaac gatgatattt tcataatttt cataatgttt ttggattaaa ctctctaaat
     9901 gattcatatc tttatgatga aaacgaaaaa aatcagccct gccaagtctt aagccatcaa
     9961 tcatacttgc atgaataaat ttatcggtta gaaaaagcgt cttagaaacg ctagaaagtg
    10021 ctgctataca agagatattt agatgatagc cactattaaa atgtaaaatt tccttatctt
    10081 taaatttagt ctttaaaaaa ctttctaatt tttcataaat ttcaaaattt ccactcaaac
    10141 ttcttgaact cgaacttgaa aaaaacaaat cttgttcttt tagggtgttt aaaaactcag
    10201 cttttaactc tttggaagac gccaaataaa gataatcatt tcctactaaa tttaaaagtt
    10261 tgtgatcttg cttataaaca aatttatttt catgttttaa aggtgttaga gttcttagat
    10321 tgtgattttg ctctagatct tgcaaaattt tttcaagctt catttttttc ctgtaaattt
    10381 aaaaatttaa agtattattt tgccaaaata tttttaaaaa agaagttata atgcaaaatc
    10441 aaatcttaaa aaatctcgat ttaaaacaca tttggcaccc ttgcacacaa atgaaagatc
    10501 acgaaaccct acctttaatt cctataaaaa aagcaaaagg tgtatggctt tatgattttg
    10561 atgataaagc ttatatggat tgtgtgagtt cttggtgggt caatcttttt ggtcattgta
    10621 atgaaaaaat cgcaaatgcc attaaaaaac aagttgatga gctagagcat gtgatcttag
    10681 caggctttac acatgagccc attatcaagc tttctgcaag actttgcgaa aaagtaggca
    10741 ggaattttaa caaatgtttt tatgcagata atggatcaag tgctattgaa gtagcactta
    10801 aaatgagttt tcattatcat ttaaataagg gagtgaaaaa aagtaaattt ttatctttaa
    10861 gcaattctta tcatggtgaa accttaggag ccttaagtgt gggcgatgta gcgctttata
    10921 aagatactta caaagccttg cttttagagt gtttaagcac gcctgtgcca caaggcaaag
    10981 actacactaa agagcttgaa attttaaaag atattttaga aaaaaatgca agtgaaattt
    11041 gtgcttttat acttgaaccc ttggtacaat gtgcaggaaa tatgcatatg tatgaagcaa
    11101 ggtttattga tgaggccata aagctttgcc ataaatttgg agtgcaagtg atttttgatg
    11161 aaattgcagt gggctttgga cgcacaggaa ctttgtttgc cttacatcaa tgcaaacaaa
    11221 gccccgattt tatctgcctt tcaaaaggga taacgggtgg atttatgcca ctttctgtag
    11281 tgcttacaag agatgaaatt tataatgctt tttatgatac ttatgaaagc caaaaggctt
    11341 ttttacattc tcatagctat acgggaaata ccttagcttg cgcggcagca aatgcggttt
    11401 tagatatctt tgaggatgaa aatattttag taaaaaatca aattttaagc gagtttatca
    11461 aaaaagaatt ttcaagactt gaaaaatttg actttttggg taattttaga acttgcggga
    11521 tgatcagtgc ttttgatatt ttaagcacca agtataaacg cgtaggactt tttgtatttc
    11581 aaaaagcctt agaaaaaggt ttgcttttaa gacctttagc aaatacgatt tattttatgc
    11641 ctccttacat catcacaaaa gaacaaatcg tttatgtact agagagttta gagcagattt
    11701 ttaaggaatt ttaagttgta aaatttcttg catttgctct ttaaaatctt tatttaaaat
    11761 gctattttca tcaaaaaaat caagattgat tataggaatt tttgcataat tttttataaa
    11821 atcatcttgt aagatatctt ttttacccat cattacaagg gctaaaagat tgatatttct
    11881 ttgctttaaa gcttcaatgc taagcaagat atgattaatg cttccaagat agtattttgc
    11941 taccaaaatc gtagggtgtt tgaaaatatt cacaaaatca atcatagtgt aattttcatc
    12001 cataggagaa aaaagcccac ccgcaagctc aataagtagg tttttgcttt ttggtaaaat
    12061 gatatctaag gctttataat caagcttttc tttgattttt ccaagatgag gagaagctgg
    12121 agtttgcaaa aaaatacctt ctttaaaaat ctttgttttt gggctaaatt ttgcaataaa
    12181 ctcactatct gttggagttc ctgcttgaat gagtttaaaa taatcatagt taaaattcgc
    12241 acaaaaagct gcactaaaat gtgtttttcc tacatcagta tgtattccac ttacataaat
    12301 ttgcacaaaa aatcctcaag aaagaaattt taaacccgct gtacaagtaa taatcacagc
    12361 gattaaaaaa agtttcaaaa aacttttact ttctttataa aaaagcactc ctatcattac
    12421 cccaccagcg gttccagctc ctgtccatat agcataagca acgctcatag cgatattttg
    12481 catacttaag cttaaaaaag taaaagaaaa tccaaaacac actatcaaag ctaaaaggta
    12541 aagcttgttt ttagtgctta caagttcttt catgatcacc acgccaaaaa tttcacaggc
    12601 agtagctaaa aacaaataaa accattccat agtttaagct tccttgctta cccatttaag
    12661 ggctataata cttaaaagta aaattgctat aagcacaagt ttaattatag aaacagcttc
    12721 gttaaaaata aacatttcat ttaaaaccac cccaatagtg ccaatgccta caaaaacact
    12781 ataagtaata cttacttcaa gtctttcgca agcttttaaa aagcaagtaa aagaaataca
    12841 aaccccaatg gctgttaaaa tatactgcca aatttctgta gaatatttaa gtccacttac
    12901 ccaaaagcac tctataattc cacctaagat tattaaaaac caagctatat taatattgaa
    12961 tttttcattc acatgaagcc ttaaattaac ataatatttg taaaacaaat tatatcttaa
    13021 agaaattaaa agaagctata aatttacttt tccataagcc aaaattagat ataatcaaag
    13081 ctcatttttt aagaaaggat aaaagatgtt agaaggtatc gttagagaga gtatcggtag
    13141 aaaagctgct aaagctttaa aaagagatgg ttatctaatt gcaaacatct atggaaaagg
    13201 attagaaaac atcaatgccg cttttaaagt aaatgagttt attaaggaag ttcgtaaaaa
    13261 aactacttta atttttgatg taaaagtagg ttctcaaact ttaagcgttg tagttgtgga
    13321 ttatcaaaaa gatcctgtaa ctgcagaact taaacatgtg gatttaaaag ttgcgcaaaa
    13381 aggtgtgatt tctaaataca tggttccagt taaaatcaca ggaacagcta taggtcttaa
    13441 aaataaaggt gttttaattc aatcaaaaag aagattaaaa gtaaaatgtg cagctgaaaa
    13501 tttaccaaat ttcttcgaac ttgatgtaag taaacttgat gtgggtgatg ctttacttgt
    13561 tcgtgatatt gtagttcctg cgggagtaac tatgattgat gctgatagag tagcggttgt
    13621 aggtgtagaa aaagctagat gattttagtc gtagggcttg gcaatatagg cgtagagtat
    13681 gaaaataccc gtcataatgt cggttttatg ctaattgact tacttttaaa agaaagcaat
    13741 tttacaaatc ttacaaactc taaatttaaa ggagagcttt ttaaaatagg ttcttcttta
    13801 cttcttctta aacctagtac ttatatgaat aattcaggac ttagcgtaaa agcagtgaat
    13861 gatttttata aatgcgaaag aatgatagtt atccatgatg atatagatat aaatttagga
    13921 gccttgcgct ttaaaaaagg cggttcaagt ggtggacata atgggcttaa aagcatagat
    13981 actttatgtg gaaatgacta tgaaagagtg cgtataggag tgggaaaggg tgaaaatgtg
    14041 atttcccatg ttttaggtaa atttaaatcc gaagaagaaa taactttaag caaagtttta
    14101 gagcatgcaa aaaaagcttt gcttgagctt attgaaaatg atgatttgtc tgctatatca
    14161 tccaaataca gcctaaaggc ttaagatgtg gatatttttt cgttttattt cagggat
//
